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source: branches/MarsResidualTimeSpread/mjobs/MJSimulation.cc@ 18019

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Last change on this file since 18019 was 18019, checked in by Jens Buss, 10 years ago
added a parameter ResidualTimeSpread to the parameter list. This parameter is the standard deviation of a gaussian normal distribution. Values drawn from that distributuion are used as offset for the arrival time of a cherenkov photon bunch in each pixel.
File size: 35.7 KB

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1	/* ======================================================================== *\
2	!
3	! *
4	! * This file is part of MARS, the MAGIC Analysis and Reconstruction
5	! * Software. It is distributed to you in the hope that it can be a useful
6	! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
7	! * It is distributed WITHOUT ANY WARRANTY.
8	! *
9	! * Permission to use, copy, modify and distribute this software and its
10	! * documentation for any purpose is hereby granted without fee,
11	! * provided that the above copyright notice appear in all copies and
12	! * that both that copyright notice and this permission notice appear
13	! * in supporting documentation. It is provided "as is" without express
14	! * or implied warranty.
15	! *
16	!
17	!
18	! Author(s): Thomas Bretz, 1/2009 <mailto:tbretz@astro.uni-wuerzburg.de>
19	!
20	! Copyright: MAGIC Software Development, 2000-2009
21	!
22	!
23	\* ======================================================================== */
24
25	/////////////////////////////////////////////////////////////////////////////
26	//
27	// MJSimulation
28	//
29	//
30	// Force reading a corsika file even if the footer (RUNE-section) is missing
31	// by setting fForceMode to kTRUE or from the resource file by
32	//
33	// ForceMode: Yes
34	//
35	//
36	// To switch off the simulation of the camera electronics, use:
37	//
38	// Camera: Off
39	//
40	// Note, that the border of the camera and the propertied of the cones
41	// are still simulated (simply because it is fast). Furthermore, this
42	// switches off the trigger for the output, i.e. all data which deposits
43	// at least one photon in at least one pixel is written to the output file.
44	//
45	//
46	// In case of a pedestal or calibration run the artificial trigger can
47	// be "switched off" and the cosmics trrigger "switched on" by setting
48	// fForceTrigger to kTRUE or from the resource file by
49	//
50	// ForceTrigger: Yes
51	//
52	//
53	/////////////////////////////////////////////////////////////////////////////
54	#include "MJSimulation.h"
55
56	#include <TEnv.h>
57	#include <TCanvas.h>
58
59	// Core
60	#include "MLog.h"
61	#include "MLogManip.h"
62
63	#include "MArgs.h"
64	#include "MDirIter.h"
65	#include "MParList.h"
66	#include "MTaskList.h"
67	#include "MEvtLoop.h"
68
69	#include "MStatusDisplay.h"
70
71	// Tasks
72	#include "MCorsikaRead.h"
73	#include "MContinue.h"
74	#include "MFillH.h"
75	#include "MGeomApply.h"
76	#include "MParameterCalc.h"
77	#include "MHillasCalc.h"
78	#include "MImgCleanStd.h"
79	#include "MWriteRootFile.h"
80	#include "MWriteFitsFile.h"
81
82	#include "MSimMMCS.h"
83	#include "MSimAbsorption.h"
84	#include "MSimAtmosphere.h"
85	#include "MSimReflector.h"
86	#include "MSimPointingPos.h"
87	#include "MSimPSF.h"
88	#include "MSimGeomCam.h"
89	#include "MSimSignalCam.h"
90	#include "MSimAPD.h"
91	#include "MSimExcessNoise.h"
92	#include "MSimCamera.h"
93	#include "MSimTrigger.h"
94	#include "MSimReadout.h"
95	#include "MSimRandomPhotons.h"
96	#include "MSimBundlePhotons.h"
97	#include "MSimCalibrationSignal.h"
98
99	// Histograms
100	#include "MBinning.h"
101
102	#include "MHn.h"
103	#include "MHCamera.h"
104	#include "MHCamEvent.h"
105	#include "MHPhotonEvent.h"
106
107	// Container
108	#include "MRawRunHeader.h"
109	#include "MParameters.h"
110	#include "MReflector.h"
111	#include "MParEnv.h"
112	#include "MSpline3.h"
113	#include "MParSpline.h"
114	#include "MGeomCam.h"
115	#include "MMatrix.h"
116
117	#include "MPedestalCam.h"
118	#include "MPedestalPix.h"
119
120	ClassImp(MJSimulation);
121
122	using namespace std;
123
124	// --------------------------------------------------------------------------
125	//
126	// Default constructor.
127	//
128	// Sets fRuns to 0, fExtractor to NULL, fDataCheck to kFALSE
129	//
130	MJSimulation::MJSimulation(const char name, const char title)
131	: fForceMode(kFALSE), fCamera(kTRUE), fForceTrigger(kFALSE),
132	fWriteFitsFile(kFALSE), fOperationMode(kModeData), fRunNumber(-1)
133	{
134	fName = name ? name : "MJSimulation";
135	fTitle = title ? title : "Standard analysis and reconstruction";
136	}
137
138	Bool_t MJSimulation::CheckEnvLocal()
139	{
140	fForceMode = GetEnv("ForceMode", fForceMode);
141	fForceTrigger = GetEnv("ForceTrigger", fForceTrigger);
142	fCamera = GetEnv("Camera", fCamera);
143
144	return kTRUE;
145	}
146	/*
147	TString MJSimulation::GetOutFile(const MSequence &seq) const
148	{
149	return seq.IsValid() ? Form("ceres%08d.root", seq.GetSequence()) : "ceres.root";
150	}
151	*/
152
153	Bool_t MJSimulation::WriteResult(const MParList &plist, const MSequence &seq, Int_t num)
154	{
155	if (fPathOut.IsNull())
156	{
157	*fLog << inf << "No output path specified via SetPathOut - no output written." << endl;
158	return kTRUE;
159	}
160
161	TObjArray cont;
162	cont.Add(const_cast<TEnv*>(GetEnv()));
163	if (seq.IsValid())
164	cont.Add(const_cast<MSequence*>(&seq));
165
166	cont.Add(plist.FindObject("PulseShape"));
167	cont.Add(plist.FindObject("Reflector"));
168	cont.Add(plist.FindObject("MGeomCam"));
169	cont.Add(plist.FindObject("GeomCones"));
170
171	TNamed cmdline("CommandLine", fCommandLine.Data());
172	cont.Add(&cmdline);
173
174	if (fDisplay)
175	{
176	TString title = "-- Ceres";
177	if (seq.IsValid())
178	{
179	title += ": ";
180	title += seq.GetSequence();
181	}
182	title += " --";
183	fDisplay->SetTitle("Ceres", kFALSE);
184
185	cont.Add(fDisplay);
186	}
187
188	const TString name = Form("ceres%08d.root", num);
189	return WriteContainer(cont, name, "RECREATE");
190	}
191
192	void MJSimulation::SetupHist(MHn &hist) const
193	{
194	hist.AddHist("MCorsikaEvtHeader.fTotalEnergy");
195	hist.InitName("Energy");
196	hist.InitTitle("Energy;E [GeV]");
197	hist.SetLog(kTRUE, kTRUE, kFALSE);
198
199	hist.AddHist("MPhotonEvent.GetNumExternal");
200	hist.InitName("Size");
201	hist.InitTitle("Size;S [#]");
202	hist.SetLog(kTRUE, kTRUE, kFALSE);
203
204	/*
205	hist.AddHist("-MCorsikaEvtHeader.fX/100","-MCorsikaEvtHeader.fY/100");
206	hist.SetDrawOption("colz");
207	hist.InitName("Impact;Impact;Impact");
208	hist.InitTitle("Impact;West <--> East [m];South <--> North [m]");
209	hist.SetAutoRange();
210	*/
211
212	hist.AddHist("MCorsikaEvtHeader.GetImpact/100");
213	hist.InitName("Impact");
214	hist.InitTitle("Impact;Impact [m]");
215	hist.SetAutoRange();
216
217	hist.AddHist("MCorsikaEvtHeader.fFirstInteractionHeight/100000");
218	hist.InitName("Height");
219	hist.InitTitle("FirstInteractionHeight;h [km]");
220
221	hist.AddHist("(MCorsikaEvtHeader.fAz+MCorsikaRunHeader.fMagneticFieldAz)TMath::RadToDeg()", "MCorsikaEvtHeader.fZdTMath::RadToDeg()");
222	hist.InitName("SkyOrigin;Az;Zd");
223	hist.InitTitle("Sky Origin;Az [\\circ];Zd [\\circ]");
224	hist.SetDrawOption("colz");
225	hist.SetAutoRange();
226
227	hist.AddHist("IncidentAngle.fVal");
228	hist.InitName("ViewCone");
229	hist.InitTitle("Incident Angle;\\alpha [\\circ]");
230	}
231
232	template<class T>
233	void MJSimulation::SetupCommonFileStructure(T &write) const
234	{
235	// Common run headers
236	write.AddContainer("MMcCorsikaRunHeader", "RunHeaders", kFALSE, 1);
237	write.AddContainer("MCorsikaRunHeader", "RunHeaders", kFALSE, 1);
238	write.AddContainer("MRawRunHeader", "RunHeaders", kTRUE, 1);
239	write.AddContainer("MGeomCam", "RunHeaders", kTRUE, 1);
240	write.AddContainer("MMcRunHeader", "RunHeaders", kTRUE, 1);
241
242	// Common events
243	write.AddContainer("MCorsikaEvtHeader", "Events", kFALSE);
244	write.AddContainer("MRawEvtHeader", "Events");
245	write.AddContainer("MMcEvt", "Events", kFALSE);
246	write.AddContainer("IncidentAngle", "Events", kFALSE);
247	write.AddContainer("MPointingPos", "Events", kFALSE);
248	}
249
250	void MJSimulation::SetupHeaderKeys(MWriteFitsFile &write,MRawRunHeader &header) const
251	{
252	const MTime now(-1);
253	write.SetHeaderKey("ISMC",true,"Bool if File is Montecarlo File");
254	write.SetHeaderKey("TELESCOP", "FACT", "");
255	write.SetHeaderKey("PACKAGE", "MARS Cheobs", "");
256	write.SetHeaderKey("VERSION", "1.0", "");
257	write.SetHeaderKey("CREATOR", "Ceres", "");
258	write.SetHeaderKey("EXTREL", 1., "");
259	write.SetHeaderKey("COMPILED", __DATE__" " __TIME__, "");
260	write.SetHeaderKey("REVISION", "0", "");
261	write.SetHeaderKey("ORIGIN", "FACT", "");
262	write.SetHeaderKey("DATE", now.GetStringFmt("%Y-%m-%dT%H:%M:%S").Data(), "");
263	write.SetHeaderKey("NIGHT", now.GetNightAsInt(), "");
264	write.SetHeaderKey("TIMESYS", "UTC", "");
265	write.SetHeaderKey("TIMEUNIT", "d", "");
266	write.SetHeaderKey("MJDREF", 40587, "");
267	//write.SetHeaderKey("BLDVER", 1, "");
268	write.SetHeaderKey("RUNID", header.GetRunNumber(), "");
269	write.SetHeaderKey("NBOARD", 40, "");
270	write.SetHeaderKey("NPIX", header.GetNumPixel(), "");
271	write.SetHeaderKey("NROI", header.GetNumSamplesHiGain(), "");
272	write.SetHeaderKey("NROITM", 0, "");
273	write.SetHeaderKey("TMSHIFT", 0, "");
274	write.SetHeaderKey("CAMERA", "MGeomCamFACT", "");
275	write.SetHeaderKey("DAQ", "DRS4", "");
276
277	// FTemme: ADCRANGE and ADC have to be calculated, using the values for
278	// the fadctype.
279	// write.SetHeaderKey("ADCRANGE", 2000, "Dynamic range in mV");
280	// write.SetHeaderKey("ADC", 12, "Resolution in bits");
281
282	switch(header.GetRunType())
283	{
284	case MRawRunHeader::kRTData\|MRawRunHeader::kRTMonteCarlo:
285	write.SetHeaderKey("RUNTYPE", "data", "");
286	break;
287	case MRawRunHeader::kRTPedestal\|MRawRunHeader::kRTMonteCarlo:
288	write.SetHeaderKey("RUNTYPE", "pedestal", "");
289	break;
290	case MRawRunHeader::kRTCalibration\|MRawRunHeader::kRTMonteCarlo:
291	write.SetHeaderKey("RUNTYPE", "calibration", "");
292	break;
293	}
294	// write.SetHeaderKey("ID", 777, "Board 0: Board ID");
295	// write.SetHeaderKey("FMVER", 532, "Board 0: Firmware Version");
296	// write.SetHeaderKey("DNA", "0", "");
297	// write.SetHeaderKey("BOARD", 0, "");
298	// write.SetHeaderKey("PRESC", 40, "");
299	// write.SetHeaderKey("PHASE", 0, "");
300	// write.SetHeaderKey("DAC0", 26500, "");
301	// write.SetHeaderKey("DAC1", 0, "");
302	// write.SetHeaderKey("DAC2", 0, "");
303	// write.SetHeaderKey("DAC3", 0, "");
304	// write.SetHeaderKey("DAC4", 28800, "");
305	// write.SetHeaderKey("DAC5", 28800, "");
306	// write.SetHeaderKey("DAC6", 28800, "");
307	// write.SetHeaderKey("DAC7", 28800, "");
308	write.SetHeaderKey("REFCLK", header.GetFreqSampling(), "");
309	write.SetHeaderKey("DRSCALIB", false, "");
310	// write.SetHeaderKey("TSTARTI", 0, "");
311	// write.SetHeaderKey("TSTARTF", 0., "");
312	// write.SetHeaderKey("TSTOPI", 0, "");
313	// write.SetHeaderKey("TSTOPF", 0., "");
314	// write.SetHeaderKey("DATE-OBS", "1970-01-01T00:00:00", "");
315	// write.SetHeaderKey("DATE-END", "1970-01-01T00:00:00", "");
316	// write.SetHeaderKey("NTRG", 0, "");
317	// write.SetHeaderKey("NTRGPED", 0, "");
318	// write.SetHeaderKey("NTRGLPE", 0, "");
319	// write.SetHeaderKey("NTRGTIM", 0, "");
320	// write.SetHeaderKey("NTRGLPI", 0, "");
321	// write.SetHeaderKey("NTRGEXT1", 0, "");
322	// write.SetHeaderKey("NTRGEXT2", 0, "");
323	// write.SetHeaderKey("NTRGMISC", 0, "");
324	}
325
326	void MJSimulation::SetupVetoColumns(MWriteFitsFile &write) const
327	{
328	write.VetoColumn("MParameterD.fVal");
329	write.VetoColumn("MRawEvtData.fLoGainPixId");
330	write.VetoColumn("MRawEvtData.fLoGainFadcSamples");
331	write.VetoColumn("MRawEvtData.fABFlags");
332	write.VetoColumn("MRawEvtHeader.fNumTrigLvl2");
333	//write.VetoColumn("MRawEvtHeader.fTrigPattern");
334	write.VetoColumn("MRawEvtHeader.fNumLoGainOn");
335	}
336
337	Bool_t MJSimulation::Process(const MArgs &args, const MSequence &seq)
338	{
339	*fLog << inf;
340	fLog->Separator(GetDescriptor());
341
342	if (!CheckEnv())
343	return kFALSE;
344
345	if (seq.IsValid())
346	*fLog << fSequence.GetFileName() << endl;
347	else
348	*fLog << "Input: " << args.GetNumArguments() << "-files" << endl;
349	*fLog << endl;
350
351	MDirIter iter;
352	if (seq.IsValid() && seq.GetRuns(iter, MSequence::kCorsika)<=0)
353	{
354	*fLog << err << "ERROR - Sequence valid but without files." << endl;
355	return kFALSE;
356	}
357
358	// --------------------------------------------------------------------------------
359	// Setup Parlist
360	MParList plist;
361	plist.AddToList(this); // take care of fDisplay!
362	// setup TaskList
363	MTaskList tasks;
364	plist.AddToList(&tasks);
365	// --------------------------------------------------------------------------------
366
367	// FIXME: Allow empty GeomCones!
368	MParEnv env0("Reflector");
369	MParEnv env1("GeomCones");
370	MParEnv env2("MGeomCam");
371	env0.SetClassName("MReflector");
372	env1.SetClassName("MGeomCam");
373	env2.SetClassName("MGeomCam");
374	plist.AddToList(&env0);
375	plist.AddToList(&env1);
376	plist.AddToList(&env2);
377
378	plist.FindCreateObj("MPedPhotCam", "MPedPhotFromExtractorRndm");
379
380	MParSpline shape("PulseShape");
381	plist.AddToList(&shape);
382
383	// * FIXME * FIXME * FIXME *
384	plist.FindCreateObj("MMcRunHeader");
385
386	MRawRunHeader header;
387	header.SetValidMagicNumber();
388	//header.InitFadcType(3);
389
390	switch (fOperationMode)
391	{
392	case kModeData:
393	header.SetRunType(MRawRunHeader::kRTMonteCarlo\|MRawRunHeader::kRTData);
394	header.SetRunInfo(0, fRunNumber<0 ? 3 : fRunNumber);
395	break;
396
397	case kModePed:
398	header.SetRunType(MRawRunHeader::kRTMonteCarlo\|MRawRunHeader::kRTPedestal);
399	header.SetSourceInfo("Pedestal");
400	header.SetRunInfo(0, fRunNumber<0 ? 1 : fRunNumber);
401	break;
402
403	case kModeCal:
404	header.SetRunType(MRawRunHeader::kRTMonteCarlo\|MRawRunHeader::kRTCalibration);
405	header.SetSourceInfo("Calibration");
406	header.SetRunInfo(0, fRunNumber<0 ? 2 : fRunNumber);
407	break;
408
409	case kModePointRun:
410	header.SetRunType(MRawRunHeader::kRTMonteCarlo\|MRawRunHeader::kRTPointRun);
411	header.SetRunInfo(0, fRunNumber<0 ? 0 : fRunNumber);
412	break;
413	}
414
415	// FIXME: Move to MSimPointingPos, MSimCalibrationSignal
416	// Can we use this as input for MSimPointingPos?
417	header.SetObservation("On", "MonteCarlo");
418	plist.AddToList(&header);
419
420	MCorsikaRead read;
421	read.SetForceMode(fForceMode);
422
423	if (!seq.IsValid())
424	{
425	for (int i=0; i<args.GetNumArguments(); i++)
426	read.AddFile(args.GetArgumentStr(i));
427	}
428	else
429	read.AddFiles(iter);
430
431	MContinue precut("", "PreCut");
432	precut.IsInverted();
433	precut.SetAllowEmpty();
434
435	MSimMMCS simmmcs;
436
437	MParSpline splinepde("PhotonDetectionEfficiency");
438	MParSpline splinemirror("MirrorReflectivity");
439	MParSpline splinecones("ConesAngularAcceptance");
440	MParSpline splinecones2("ConesTransmission");
441	plist.AddToList(&splinepde);
442	plist.AddToList(&splinemirror);
443	plist.AddToList(&splinecones);
444	plist.AddToList(&splinecones2);
445
446	const TString sin2 = "sin(MCorsikaEvtHeader.fZd)sin(MCorsikaRunHeader.fZdMinTMath::DegToRad())";
447	const TString cos2 = "cos(MCorsikaEvtHeader.fZd)cos(MCorsikaRunHeader.fZdMinTMath::DegToRad())";
448	const TString cos = "cos(MCorsikaEvtHeader.fAz-MCorsikaRunHeader.fAzMin*TMath::DegToRad())";
449
450	const TString form = "acos("+sin2+""+cos+"+"+cos2+")TMath::RadToDeg()";
451
452	MParameterCalc calcangle(form, "CalcIncidentAngle");
453	calcangle.SetNameParameter("IncidentAngle");
454
455	MSimAtmosphere simatm;
456	MSimAbsorption absapd("SimPhotonDetectionEfficiency");
457	MSimAbsorption absmir("SimMirrorReflectivity");
458	MSimAbsorption cones("SimConesAngularAcceptance");
459	MSimAbsorption cones2("SimConesTransmission");
460	absapd.SetParName("PhotonDetectionEfficiency");
461	absmir.SetParName("MirrorReflectivity");
462	cones.SetParName("ConesAngularAcceptance");
463	cones.SetUseTheta();
464	cones2.SetParName("ConesTransmission");
465
466	MSimPointingPos pointing;
467
468	MSimReflector reflect;
469	reflect.SetNameGeomCam("GeomCones");
470	reflect.SetNameReflector("Reflector");
471	// MSimStarField stars;
472
473	MContinue cont1("MPhotonEvent.GetNumPhotons<1", "ContEmpty1");
474	MContinue cont2("MPhotonEvent.GetNumPhotons<1", "ContEmpty2");
475	MContinue cont3("MPhotonEvent.GetNumPhotons<2", "ContEmpty3");
476	cont1.SetAllowEmpty();
477	cont2.SetAllowEmpty();
478	cont3.SetAllowEmpty();
479
480	// -------------------------------------------------------------------
481
482	MBinning binse( 120, 1, 1000000, "BinningEnergy", "log");
483	MBinning binsth( 60, 0.9, 900000, "BinningThreshold", "log");
484	MBinning binsee( 36, 0.9, 900000, "BinningEnergyEst", "log");
485	MBinning binss( 100, 1, 10000000, "BinningSize", "log");
486	// MBinning binsi( 100, -500, 500, "BinningImpact");
487	MBinning binsi( 32, 0, 800, "BinningImpact");
488	MBinning binsh( 150, 0, 50, "BinningHeight");
489	MBinning binsaz(720, -360, 360, "BinningAz");
490	MBinning binszd( 70, 0, 70, "BinningZd");
491	MBinning binsvc( 35, 0, 7, "BinningViewCone");
492	MBinning binsel(150, 0, 50, "BinningTotLength");
493	MBinning binsew(150, 0, 15, "BinningMedLength");
494	MBinning binsd("BinningDistC");
495	MBinning binsd0("BinningDist");
496	MBinning binstr("BinningTrigPos");
497
498	plist.AddToList(&binsee);
499	plist.AddToList(&binse);
500	plist.AddToList(&binsth);
501	plist.AddToList(&binss);
502	plist.AddToList(&binsi);
503	plist.AddToList(&binsh);
504	plist.AddToList(&binszd);
505	plist.AddToList(&binsaz);
506	plist.AddToList(&binsvc);
507	plist.AddToList(&binsel);
508	plist.AddToList(&binsew);
509	plist.AddToList(&binstr);
510	plist.AddToList(&binsd);
511	plist.AddToList(&binsd0);
512
513	MHn mhn1, mhn2, mhn3, mhn4;
514	SetupHist(mhn1);
515	SetupHist(mhn2);
516	SetupHist(mhn3);
517	SetupHist(mhn4);
518
519	MH3 mhtp("TriggerPos.fVal-IntendedPulsePos.fVal-PulseShape.GetWidth");
520	mhtp.SetName("TrigPos");
521	mhtp.SetTitle("Trigger position w.r.t. the first photon hitting a detector");
522
523	MH3 mhew("MPhotonStatistics.fLength");
524	mhew.SetName("TotLength");
525	mhew.SetTitle("Time between first and last photon hitting a detector;L [ns]");
526
527	MH3 mhed("MPhotonStatistics.fTimeMedDev");
528	mhed.SetName("MedLength");
529	mhed.SetTitle("Median deviation (1\\sigma);L [ns]");
530
531	MFillH fillh1(&mhn1, "", "FillCorsika");
532	MFillH fillh2(&mhn2, "", "FillH2");
533	MFillH fillh3(&mhn3, "", "FillH3");
534	MFillH fillh4(&mhn4, "", "FillH4");
535	MFillH filltp(&mhtp, "", "FillTriggerPos");
536	MFillH fillew(&mhew, "", "FillEvtWidth");
537	MFillH filled(&mhed, "", "FillMedDev");
538	fillh1.SetNameTab("Corsika", "Distribution as simulated by Corsika");
539	fillh2.SetNameTab("Detectable", "Distribution of events hit the detector");
540	fillh3.SetNameTab("Triggered", "Distribution of triggered events");
541	fillh4.SetNameTab("Cleaned", "Distribution after cleaning and cuts");
542	filltp.SetNameTab("TrigPos", "TriggerPosition w.r.t the first photon");
543	fillew.SetNameTab("EvtWidth", "Time between first and last photon hitting a detector");
544	filled.SetNameTab("MedDev", "Median deviation of arrival time of photons hitting a detector");
545
546	MHPhotonEvent planeG(1, "HPhotonEventGround"); // Get from MaxImpact
547	MHPhotonEvent plane0(2, "HMirrorPlane0"); // Get from MReflector
548	//MHPhotonEvent plane1(2, "HMirrorPlane1");
549	MHPhotonEvent plane2(2, "HMirrorPlane2");
550	MHPhotonEvent plane3(2, "HMirrorPlane3");
551	MHPhotonEvent plane4(2, "HMirrorPlane4");
552	MHPhotonEvent planeF1(6, "HPhotonEventCamera"); // Get from MGeomCam
553	MHPhotonEvent planeF2(header.IsPointRun()?4:6, "HPhotonEventCones"); // Get from MGeomCam
554
555	plist.AddToList(&planeG);
556	plist.AddToList(&plane0);
557	plist.AddToList(&plane2);
558	plist.AddToList(&plane3);
559	plist.AddToList(&plane4);
560	plist.AddToList(&planeF1);
561	plist.AddToList(&planeF2);;
562
563	//MHPSF psf;
564
565	MFillH fillG(&planeG, "MPhotonEvent", "FillGround");
566	MFillH fill0(&plane0, "MirrorPlane0", "FillReflector");
567	//MFillH fill1(&plane1, "MirrorPlane1", "FillCamShadow");
568	MFillH fill2(&plane2, "MirrorPlane2", "FillCandidates");
569	MFillH fill3(&plane3, "MirrorPlane3", "FillReflected");
570	MFillH fill4(&plane4, "MirrorPlane4", "FillFocal");
571	MFillH fillF1(&planeF1, "MPhotonEvent", "FillCamera");
572	MFillH fillF2(&planeF2, "MPhotonEvent", "FillCones");
573	//MFillH fillP(&psf, "MPhotonEvent", "FillPSF");
574
575	fillG.SetNameTab("Ground", "Photon distribution at ground");
576	fill0.SetNameTab("Reflector", "Photon distribution at reflector plane w/o camera shadow");
577	//fill1.SetNameTab("CamShadow", "Photon distribution at reflector plane w/ camera shadow");
578	fill2.SetNameTab("Candidates", "Can hit photon distribution at reflector plane w/ camera shadow");
579	fill3.SetNameTab("Reflected", "Photon distribution after reflector projected to reflector plane");
580	fill4.SetNameTab("Focal", "Photon distribution at focal plane");
581	fillF1.SetNameTab("Camera", "Photon distribution which hit the detector");
582	fillF2.SetNameTab("Cones", "Photon distribution after cones");
583	//fillP.SetNameTab("PSF", "Photon distribution after cones for all mirrors");
584
585	// -------------------------------------------------------------------
586
587	if (!fFileOut.IsNull())
588	{
589	const Ssiz_t dot = fFileOut.Last('.');
590	const Ssiz_t slash = fFileOut.Last('/');
591	if (dot>slash)
592	fFileOut = fFileOut.Remove(dot);
593	}
594
595	// -------------------------------------------------------------------
596
597	const char *fmt = fFileOut.IsNull() ?
598	Form("s/cer([0-9]+)([0-9][0-9][0-9])/%s\\/%08d.$2%%s_MonteCarlo$1.root/", Esc(fPathOut).Data(), header.GetRunNumber()) :
599	Form("%s/%s%%s.root", Esc(fPathOut).Data(), Esc(fFileOut).Data());
600
601	const TString rule1(Form(fmt, fFileOut.IsNull()?"_R":""));
602	const TString rule2(Form(fmt, "_Y"));
603	const TString rule4(Form(fmt, "_I"));
604	TString rule3(Form(fmt, Form("_%c", header.GetRunTypeChar())));
605
606	MWriteRootFile write4a( 2, rule4, fOverwrite?"RECREATE":"NEW", "Star file");
607	MWriteRootFile write4b( 2, rule4, fOverwrite?"RECREATE":"NEW", "Star file");
608	MWriteRootFile write3b( 2, rule3, fOverwrite?"RECREATE":"NEW", "Camera file");
609	MWriteRootFile write2a( 2, rule2, fOverwrite?"RECREATE":"NEW", "Signal file");
610	MWriteRootFile write2b( 2, rule2, fOverwrite?"RECREATE":"NEW", "Signal file");
611	MWriteRootFile write1a( 2, rule1, fOverwrite?"RECREATE":"NEW", "Reflector file");
612	MWriteRootFile write1b( 2, rule1, fOverwrite?"RECREATE":"NEW", "Reflector file");
613
614	if (fWriteFitsFile)
615	rule3.ReplaceAll(".root", ".fits");
616
617	MWriteFitsFile write3af( 2, rule3, fOverwrite?"RECREATE":"NEW", "Camera file");
618	MWriteRootFile write3ar( 2, rule3, fOverwrite?"RECREATE":"NEW", "Camera file");
619
620	MTask &write3a = fWriteFitsFile ? static_cast<MTask&>(write3af) : static_cast<MTask&>(write3ar);
621
622	//SetupHeaderKeys(write3af,header);
623	SetupVetoColumns(write3af);
624
625	write3af.SetBytesPerSample("Data", 2);
626
627	write1a.SetName("WriteRefData");
628	write1b.SetName("WriteRefMC");
629	write2a.SetName("WriteSigData");
630	write2b.SetName("WriteSigMC");
631	write3a.SetName("WriteCamData");
632	write3b.SetName("WriteCamMC");
633	write4a.SetName("WriteImgData");
634	write4b.SetName("WriteImgMC");
635
636	SetupCommonFileStructure(write1a);
637	SetupCommonFileStructure(write2a);
638	SetupCommonFileStructure(write3ar);
639	SetupCommonFileStructure(write3af);
640	SetupCommonFileStructure(write4a);
641
642	// R: Dedicated file structure
643	write1a.AddContainer("MPhotonEvent", "Events");
644
645	// Y: Dedicated file structure
646	write2a.AddContainer("MPedPhotFromExtractorRndm", "RunHeaders", kTRUE, 1); // FIXME: Needed for the signal files to be display in MARS
647	write2a.AddContainer("MSignalCam", "Events");
648
649	// D: Dedicated file structure
650	write3af.AddContainer("ElectronicNoise", "RunHeaders", kTRUE, 1);
651	write3af.AddContainer("IntendedPulsePos", "RunHeaders", kTRUE, 1);
652	write3af.AddContainer("ResidualTimeSpread", "RunHeaders", kTRUE, 1);
653	write3af.AddContainer("MRawEvtData", "Events");
654	write3af.AddContainer("MTruePhotonsPerPixelCont", "Events");
655	write3af.AddContainer("MPhotonEvent","Events");
656
657	write3ar.AddContainer("ElectronicNoise", "RunHeaders", kTRUE, 1);
658	write3ar.AddContainer("IntendedPulsePos", "RunHeaders", kTRUE, 1);
659	write3ar.AddContainer("MRawEvtData", "Events");
660	// It doesn't make much sene to write this information
661	// to the file because the units are internal units not
662	// related to the output samples
663	// if (header.IsDataRun() \|\| fForceTrigger)
664	// write3a.AddContainer("TriggerPos", "Events");
665
666	// I: Dedicated file structure
667	write4a.AddContainer("MHillas", "Events");
668	write4a.AddContainer("MHillasSrc", "Events");
669	write4a.AddContainer("MImagePar", "Events");
670	write4a.AddContainer("MNewImagePar", "Events");
671
672	// Basic MC data
673	write1b.AddContainer("MMcEvtBasic", "OriginalMC");
674	write2b.AddContainer("MMcEvtBasic", "OriginalMC");
675	write3b.AddContainer("MMcEvtBasic", "OriginalMC");
676	write4b.AddContainer("MMcEvtBasic", "OriginalMC");
677
678	// -------------------------------------------------------------------
679
680	MGeomApply apply;
681
682	MSimPSF simpsf;
683
684	MSimGeomCam simgeom;
685	simgeom.SetNameGeomCam("GeomCones");
686
687	MSimCalibrationSignal simcal;
688	simcal.SetNameGeomCam("GeomCones");
689
690	// Sky Quality Meter: 21.82M = 2.02e-4cd/m^2
691	// 1cd = 12.566 lm / 4pi sr
692
693	// FIXME: Simulate photons before cones and QE!
694
695	MSimRandomPhotons simnsb;
696	simnsb.SetFreq(5.8, 0.004); // ph/m^2/nm/sr/ns NSB, 4MHz dark count rate
697	simnsb.SetNameGeomCam("GeomCones");
698
699	// FIXME: How do we handle star-light? We need the rate but we also
700	// need to process it through the mirror!
701
702	MSimAPD simapd;
703	simapd.SetNameGeomCam("GeomCones");
704
705	MSimExcessNoise simexcnoise;
706	MSimBundlePhotons simsum;
707	MSimSignalCam simsignal;
708	MSimCamera simcam;
709	MSimTrigger simtrig;
710	MSimReadout simdaq;
711
712	MContinue conttrig("TriggerPos.fVal<0", "ContTrigger");
713
714	MParameterD pulpos("IntendedPulsePos");
715	// FIXME: Set a default which could be 1/3 of the digitization window
716	// pulpos.SetVal(40); // [ns]
717	plist.AddToList(&pulpos);
718
719	MParameterD trigger("TriggerPos");
720	trigger.SetVal(0);
721	plist.AddToList(&trigger);
722
723	// -------------------------------------------------------------------
724	// Dominik and Sebastian on: fix time offsets
725	MMatrix fix_time_offsets_between_pixels_in_ns(
726	"MFixTimeOffset","titel"
727	);
728	plist.AddToList(&fix_time_offsets_between_pixels_in_ns);
729
730	// -------------------------------------------------------------------
731
732	// Jens Buss on: residual time spread
733	MParameterD resTimeSpread("ResidualTimeSpread");
734	resTimeSpread.SetVal(0.0);
735	plist.AddToList(&resTimeSpread);
736
737	// -------------------------------------------------------------------
738
739	// Remove isolated pixels
740	MImgCleanStd clean(0, 0);
741	//clean.SetCleanLvl0(0); // The level above which isolated pixels are kept
742	clean.SetCleanRings(0);
743	clean.SetMethod(MImgCleanStd::kAbsolute);
744
745	//clean.SetNamePedPhotCam("MPedPhotFromExtractorRndm");
746
747	MHillasCalc hcalc;
748	hcalc.Disable(MHillasCalc::kCalcConc);
749
750	MHCamEvent evt0a(/10/3, "Signal", "Average signal (absolute);;S [ph]");
751	MHCamEvent evt0c(/10/3, "MaxSignal", "Maximum signal (absolute);;S [ph]");
752	MHCamEvent evt0d(/11/8, "ArrTm", "Time after first photon;;T [ns]");
753	evt0a.SetErrorSpread(kFALSE);
754	evt0c.SetCollectMax();
755
756	MContinue cut("", "Cut");
757
758	MFillH fillx0a(&evt0a, "MSignalCam", "FillAvgSignal");
759	MFillH fillx0c(&evt0c, "MSignalCam", "FillMaxSignal");
760	MFillH fillx0d(&evt0d, "MSignalCam", "FillArrTm");
761	MFillH fillx1("MHHillas", "MHillas", "FillHillas");
762	MFillH fillx3("MHHillasSrc", "MHillasSrc", "FillHillasSrc");
763	MFillH fillx4("MHNewImagePar", "MNewImagePar", "FillNewImagePar");
764	MFillH fillth("MHThreshold", "", "FillThreshold");
765	MFillH fillca("MHCollectionArea", "", "FillTrigArea");
766
767	fillth.SetNameTab("Threshold");
768	fillca.SetNameTab("TrigArea");
769
770	// -------------------------------------------------------------------
771
772	if (header.IsDataRun())
773	{
774	tasks.AddToList(&read);
775	tasks.AddToList(&precut);
776	tasks.AddToList(&pointing);
777	tasks.AddToList(&simmmcs);
778	if (!fPathOut.IsNull() && !HasNullOut())
779	{
780	//tasks.AddToList(&write1b);
781	tasks.AddToList(&write2b);
782	if (fCamera)
783	tasks.AddToList(&write3b);
784	if (header.IsDataRun())
785	tasks.AddToList(&write4b);
786	}
787	// if (header.IsPointRun())
788	// tasks.AddToList(&stars);
789	if (1)
790	tasks.AddToList(&simatm); // Here because before fillh1
791	tasks.AddToList(&calcangle);
792	tasks.AddToList(&fillh1);
793	tasks.AddToList(&fillG);
794	if (!header.IsPointRun())
795	{
796	tasks.AddToList(&absapd);
797	tasks.AddToList(&absmir);
798	if (0)
799	tasks.AddToList(&simatm); // FASTER?
800	}
801	tasks.AddToList(&reflect);
802	if (!header.IsPointRun())
803	{
804	tasks.AddToList(&fill0);
805	//tasks.AddToList(&fill1);
806	tasks.AddToList(&fill2);
807	tasks.AddToList(&fill3);
808	tasks.AddToList(&fill4);
809	tasks.AddToList(&fillF1);
810	}
811	tasks.AddToList(&cones);
812	tasks.AddToList(&cones2);
813	//if (header.IsPointRun())
814	// tasks.AddToList(&fillP);
815	tasks.AddToList(&cont1);
816	}
817	// -------------------------------
818	tasks.AddToList(&apply);
819	if (header.IsDataRun())
820	{
821	tasks.AddToList(&simpsf);
822	tasks.AddToList(&simgeom);
823	tasks.AddToList(&cont2);
824	if (!header.IsPointRun())
825	{
826	tasks.AddToList(&fillF2);
827	tasks.AddToList(&fillh2);
828	}
829	tasks.AddToList(&cont3);
830	}
831	if (fCamera)
832	{
833	if (header.IsPedestalRun() \|\| header.IsCalibrationRun())
834	tasks.AddToList(&simcal);
835	tasks.AddToList(&simnsb);
836	tasks.AddToList(&simapd);
837	tasks.AddToList(&simexcnoise);
838	}
839	tasks.AddToList(&simsum);
840	if (fCamera)
841	{
842	tasks.AddToList(&simcam);
843	if (header.IsDataRun() \|\| fForceTrigger)
844	tasks.AddToList(&simtrig);
845	tasks.AddToList(&conttrig);
846	tasks.AddToList(&simdaq);
847	}
848	tasks.AddToList(&simsignal); // What do we do if signal<0?
849	if (!fPathOut.IsNull() && !HasNullOut())
850	{
851	//tasks.AddToList(&write1a);
852	if (!header.IsPedestalRun())
853	tasks.AddToList(&write2a);
854	if (fCamera)
855	tasks.AddToList(&write3a);
856	}
857	// -------------------------------
858	if (fCamera)
859	{
860	// FIXME: MHCollectionArea Trigger Area!
861	if (header.IsDataRun())
862	tasks.AddToList(&fillh3);
863	tasks.AddToList(&filltp);
864	}
865	if (header.IsDataRun())
866	{
867	tasks.AddToList(&fillew);
868	tasks.AddToList(&filled);
869	}
870	if (!header.IsPedestalRun())
871	{
872	tasks.AddToList(&fillx0a);
873	tasks.AddToList(&fillx0c);
874	}
875	if (header.IsDataRun())
876	{
877	tasks.AddToList(&clean);
878	tasks.AddToList(&hcalc);
879	tasks.AddToList(&cut);
880	tasks.AddToList(&fillx0d);
881	tasks.AddToList(&fillx1);
882	//tasks.AddToList(&fillx2);
883	tasks.AddToList(&fillx3);
884	tasks.AddToList(&fillx4);
885	if (!HasNullOut())
886	tasks.AddToList(&write4a);
887	//tasks.AddToList(&fillx5);
888
889	tasks.AddToList(&fillh4);
890	tasks.AddToList(&fillth);
891	tasks.AddToList(&fillca);
892	}
893	//-------------------------------------------
894
895	tasks.SetAccelerator(MTask::kAccDontReset\|MTask::kAccDontTime);
896
897	// Create and setup the eventloop
898	MEvtLoop evtloop(fName);
899	evtloop.SetParList(&plist);
900	evtloop.SetDisplay(fDisplay);
901	evtloop.SetLogStream(&gLog);
902	if (!SetupEnv(evtloop))
903	return kFALSE;
904
905	// FIXME: If pedestal file given use the values from this file
906	//-------------------------------------------
907
908	MGeomCam cam = static_cast<MGeomCam>(env2.GetCont());
909
910	if (binstr.IsDefault())
911	binstr.SetEdgesLin(150, -shape.GetWidth(),
912	header.GetFreqSampling()/1000.*header.GetNumSamples()+shape.GetWidth());
913
914	if (binsd.IsDefault() && cam)
915	binsd.SetEdgesLin(100, 0, cam->GetMaxRadius()*cam->GetConvMm2Deg());
916
917	if (binsd0.IsDefault() && cam)
918	binsd0.SetEdgesLin(100, 0, cam->GetMaxRadius()*cam->GetConvMm2Deg());
919
920
921	header.Print();
922
923	// FIXME: Display acceptance curves!
924
925	if (fDisplay)
926	{
927	TCanvas &c = fDisplay->AddTab("Info");
928	c.Divide(2,2);
929
930	c.cd(1);
931	gPad->SetBorderMode(0);
932	gPad->SetFrameBorderMode(0);
933	gPad->SetGridx();
934	gPad->SetGridy();
935	gROOT->SetSelectedPad(0);
936	shape.DrawClone()->SetBit(kCanDelete);
937
938	if (env0.GetCont() && (header.IsDataRun() \|\| header.IsPointRun()))
939	{
940	c.cd(3);
941	gPad->SetBorderMode(0);
942	gPad->SetFrameBorderMode(0);
943	gPad->SetGridx();
944	gPad->SetGridy();
945	gROOT->SetSelectedPad(0);
946	static_cast<MReflector*>(env0.GetCont())->DrawClone("line")->SetBit(kCanDelete);
947	}
948
949	if (fCamera)
950	{
951	if (env1.GetCont())
952	{
953	c.cd(2);
954	gPad->SetBorderMode(0);
955	gPad->SetFrameBorderMode(0);
956	gPad->SetGridx();
957	gPad->SetGridy();
958	gROOT->SetSelectedPad(0);
959	MHCamera c = new MHCamera(static_cast<MGeomCam&>(env1.GetCont()));
960	c->SetStats(kFALSE);
961	c->SetBit(MHCamera::kNoLegend);
962	c->SetBit(kCanDelete);
963	c->Draw();
964	}
965
966	if (cam)
967	{
968	c.cd(4);
969	gPad->SetBorderMode(0);
970	gPad->SetFrameBorderMode(0);
971	gPad->SetGridx();
972	gPad->SetGridy();
973	gROOT->SetSelectedPad(0);
974	MHCamera c = new MHCamera(cam);
975	c->SetStats(kFALSE);
976	c->SetBit(MHCamera::kNoLegend);
977	c->SetBit(kCanDelete);
978	c->Draw();
979	}
980	}
981
982	TCanvas &d = fDisplay->AddTab("Info2");
983	d.Divide(2,3);
984
985	d.cd(1);
986	gPad->SetBorderMode(0);
987	gPad->SetFrameBorderMode(0);
988	gPad->SetGridx();
989	gPad->SetGridy();
990	gROOT->SetSelectedPad(0);
991	splinepde.DrawClone()->SetBit(kCanDelete);
992
993	d.cd(3);
994	gPad->SetBorderMode(0);
995	gPad->SetFrameBorderMode(0);
996	gPad->SetGridx();
997	gPad->SetGridy();
998	gROOT->SetSelectedPad(0);
999	splinecones2.DrawClone()->SetBit(kCanDelete);
1000
1001	d.cd(5);
1002	gPad->SetBorderMode(0);
1003	gPad->SetFrameBorderMode(0);
1004	gPad->SetGridx();
1005	gPad->SetGridy();
1006	gROOT->SetSelectedPad(0);
1007	splinemirror.DrawClone()->SetBit(kCanDelete);
1008
1009	d.cd(2);
1010	gPad->SetBorderMode(0);
1011	gPad->SetFrameBorderMode(0);
1012	gPad->SetGridx();
1013	gPad->SetGridy();
1014	gROOT->SetSelectedPad(0);
1015	splinecones.DrawClone()->SetBit(kCanDelete);
1016	//splinecones2.DrawClone("same")->SetBit(kCanDelete);
1017
1018	d.cd(6);
1019	gPad->SetBorderMode(0);
1020	gPad->SetFrameBorderMode(0);
1021	gPad->SetGridx();
1022	gPad->SetGridy();
1023	gROOT->SetSelectedPad(0);
1024	MParSpline all = (MParSpline)splinepde.DrawClone();
1025	//all->SetTitle("Combined acceptance");
1026	all->SetBit(kCanDelete);
1027	if (splinemirror.GetSpline())
1028	all->Multiply(*splinemirror.GetSpline());
1029	if (splinecones2.GetSpline())
1030	all->Multiply(*splinecones2.GetSpline());
1031	}
1032
1033	//-------------------------------------------
1034
1035	// Execute first analysis
1036	if (!evtloop.Eventloop(fMaxEvents))
1037	{
1038	gLog << err << GetDescriptor() << ": Failed." << endl;
1039	return kFALSE;
1040	}
1041
1042	//-------------------------------------------
1043	// FIXME: Display Spline in tab
1044	// FIXME: Display Reflector in tab
1045	// FIXME: Display Routing(?) in tab
1046	// FIXME: Display Camera(s) in tab
1047	//-------------------------------------------
1048
1049	if (!WriteResult(plist, seq, header.GetRunNumber()))
1050	return kFALSE;
1051
1052	*fLog << all << GetDescriptor() << ": Done." << endl << endl << endl;;
1053
1054	return kTRUE;
1055	}

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