source: branches/Mars_IncreaseNsb/datacenter/scripts/copyscript@ 19905

Last change on this file since 19905 was 9190, checked in by Daniela Dorner, 16 years ago
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1#!/bin/sh
2#
3# ========================================================================
4#
5# *
6# * This file is part of MARS, the MAGIC Analysis and Reconstruction
7# * Software. It is distributed to you in the hope that it can be a useful
8# * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
9# * It is distributed WITHOUT ANY WARRANTY.
10# *
11# * Permission to use, copy, modify and distribute this software and its
12# * documentation for any purpose is hereby granted without fee,
13# * provided that the above copyright notice appear in all copies and
14# * that both that copyright notice and this permission notice appear
15# * in supporting documentation. It is provided "as is" without express
16# * or implied warranty.
17# *
18#
19#
20# Author(s): Daniela Dorner 08/2004 <mailto:dorner@astro.uni-wuerzburg.de>
21#
22# Copyright: MAGIC Software Development, 2000-2007
23#
24#
25# ========================================================================
26#
27#
28# This script handles the subsystem logfiles, which are copied every
29# day automatically from /local/ on pc15 in La Palma to
30# /home/lapalma/transfer/ on coma in the datacenter in Wuerzburg
31# The structure in this directory is: subsystem/date/logfile.*
32# The logfiles are from CC (*.rep, CC*.dbg, CC*.rbk, CC*.rep, CC*.run,
33# CC*.run.html), Cosy (cosy*.log, cosy*.rep, tpoint*.txt/starg*.txt)
34# AMC (AMC*.log, AMC*.info, AMC*.lut) and CaCo (dc*.txt)
35#
36# the script performs the following steps:
37# ----------------------------------------
38# - filling the information from the *.rbk and *.run files into the DB
39# using the macros filldotrbk.C and filldotrun.C
40# - moving all logfiles to the correct directory:
41# /subsystemdata/subsystem/YYYY/MM/DD/file.*
42# - building the sequences for the standard analysis in the database
43# (for each day of which a file was copied)
44# - if a new catalogfile has been copied, it is installed as standard in the
45# setup directory /magic/datacenter/setup and the new lines are sent to
46# the adresses specified in the script
47#
48# -- to make sure that no file is copied twice there's a textfile
49# (.processed), to which every file, that was processed, is added
50# .processed is copied to La Palma, so that it is possible to copy
51# only new files
52# -- to make sure that a file was copied completely before it is
53# processed, a file with the checksum of all files is also copied from
54# La Palma and the checksum is checked with this script for each file
55# before processing it.
56#
57#
58
59source `dirname $0`/sourcefile
60printprocesslog "INFO starting $0"
61program=copyscript
62
63set -C
64
65umask 0002
66
67transdir=/home/lapalma/transfer
68char=24
69datetime=`date +%F-%H-%M-%S`
70lockfile=$lockpath/lock-$program.txt
71
72scriptlog=$runlogpath/$program-$datetime.log
73date >> $scriptlog 2>&1
74
75# check if the script is already running
76checklock >> $scriptlog 2>&1
77
78cd $transdir
79
80#check the checksums, write output into file
81md5sum -c .checksums | tee $transdir/.check >> $scriptlog 2>&1
82
83if ! test -e $transdir/.check
84then
85 echo "couldn't create checkfile -> exit script" >> $scriptlog 2>&1
86 finish >> $scriptlog 2>&1
87else
88 echo "checkfile created" >> $scriptlog 2>&1
89fi
90
91
92ssh lapalma@dc09 chmod -R g+w $transdir/* >> $scriptlog 2>&1
93
94
95cd $mars
96
97echo "remove empty directories: " >> $scriptlog 2>&1
98rmdir -pv $transdir/*/* >> $scriptlog 2>&1
99
100#find all dates in transfer-directory
101dates=`find $transdir/*/ -type d | grep -o --regexp=20[0-9][0-9]_[0-1][0-9]_[0-3][0-9] | sort | uniq` >> $scriptlog 2>&1
102if ! [ "$dates" = "" ]
103then
104 echo "dates found: "$dates >> $scriptlog 2>&1
105 #loop over dates
106 for date in ${dates[@]}
107 do
108 printprocesslog "INFO processing files for $date"
109 #find all files for this date
110 files=`find $transdir/*/$date/ -name "*.*"` >> $scriptlog 2>&1
111 if [ "$files" = "" ]
112 then
113 echo "no files found for $date" >> $scriptlog 2>&1
114 continue
115 else
116 echo "files found for $date" >> $scriptlog 2>&1
117 fi
118
119 date2=`echo $date | sed -e 's/_/\//g'`
120 copylogpath=$logpath/$program/$date2
121 echo "copylogpath: "$copylogpath >> $scriptlog 2>&1
122 makedir $copylogpath >> $scriptlog 2>&1
123
124 #loop over all files in the directories for this date
125 for file in $files
126 do
127 echo "file: "$file >> $scriptlog 2>&1
128 filename=`basename $file`
129
130 #check for each file whether it has to be processed
131 if grep -i "$filename: OK" $transdir/.check >> $scriptlog 2>&1
132 then
133 newfile=`echo $file | sed -e 's/home\/lapalma\/transfer/magic\/subsystemdata/' -e 's/ccdata/cc/' -e 's/cacodata/caco/' -e 's/drivelogs/drive/' -e 's/_/\//1' -e 's/_/\//1' `
134 echo "file (new path): "$newfile >> $scriptlog 2>&1
135 newpath=`dirname $newfile`
136 #make sure, that the needed directories are available
137 makedir $newpath >> $scriptlog 2>&1
138
139 #run macros if the file is a *.rbk or a *.run file to
140 #fill the information into the db
141 if echo $filename | grep \\\.rbk$ >> $scriptlog 2>&1
142 then
143 echo "found rbk-file $filename" >> $scriptlog 2>&1
144
145 checkfillrbk=`root -q -b $macrospath/filldotrbk.C+\("\"$file\""\,kFALSE\) | tee $copylogpath/filldotrbk-$filename-log.txt | intgrep`
146
147 case $checkfillrbk in
148 1) echo " checkfillrbk=$checkfillrbk -> everything ok " >> $scriptlog 2>&1
149 echo " -> go on with moving file" >> $scriptlog 2>&1
150 ;;
151 *) echo " checkfillrbk=$checkfillrbk - Error -> go on with next file" >> $scriptlog 2>&1
152 printprocesslog "ERROR filldotrbk.C failed for $file"
153 continue
154 ;;
155 esac
156 fi
157
158 if echo $file | grep 'CC_.*.run' >> $scriptlog 2>&1 && ! echo $file | grep .run.html >> $scriptlog 2>&1
159 then
160 echo "found run-file $filename" >> $scriptlog 2>&1
161
162 fillrunlog=$copylogpath"/filldotrun-$filename-log.txt"
163 checkfillrun=`root -q -b $macrospath/filldotrun.C+\("\"$file\""\,kFALSE\) | tee $fillrunlog | intgrep`
164 if grep WARN $fillrunlog >/dev/null
165 then
166 printprocesslog "WARN found in logfile "$fillrunlog
167 fi
168
169 if grep ERROR $fillrunlog >/dev/null
170 then
171 printprocesslog "ERROR found in logfile "$fillrunlog
172 fi
173
174 case $checkfillrun in
175 1) echo " checkfillrun=$checkfillrun -> everything ok " >> $scriptlog 2>&1
176 echo " -> insert date in SequenceBuildStatus for $date" >> $scriptlog 2>&1
177
178 checkinsertdate=`root -q -b $macrospath/insertdate.C+\("\"$date\""\) | tee $copylogpath/insertdate-$date-log.txt | intgrep`
179
180 case $checkinsertdate in
181 1) echo "date inserted" >> $scriptlog 2>&1 ;;
182 *) echo " checkinsertdate=$checkinsertdate -> ERROR - insert date didn't work" >> $scriptlog 2>&1
183 printprocesslog "ERROR insertdate.C failed for $date"
184 continue
185 ;;
186 esac
187 echo " -> go on with moving file" >> $scriptlog 2>&1
188 ;;
189 *) echo " checkfillrun=$checkfillrun Error -> go on with next file" >> $scriptlog 2>&1
190 printprocesslog "ERROR filldotrun.C failed for $file"
191 continue
192 ;;
193 esac
194 fi
195
196 if mv -v $file $newpath >> $scriptlog 2>&1
197 then
198 #add file to donelist
199 filename3=`echo $file | cut -c $char-999`
200 echo "$filename3 processed" >> $transdir/.processed
201 echo $filename" moved and added to .processed" >> $scriptlog 2>&1
202 else
203 echo $file" couldn't be moved!!!!!" >> $scriptlog 2>&1
204 printprocesslog "WARN moving of file $file didn't work"
205 fi
206
207 else
208 #if the checksum for the file is not ok or the file was
209 #already processed (entry in donelist) -> go on with next file
210 echo $file": checksum not ok " >> $scriptlog 2>&1
211 printprocesslog "WARN checksum for file $file is not ok"
212 fi
213 done
214 done
215fi
216
217
218echo "remove empty directories: " >> $scriptlog 2>&1
219rmdir -pv $transdir/*/* >> $scriptlog 2>&1
220
221rm -v $transdir/.check >> $scriptlog 2>&1
222
223
224# second part of the script
225#searching optical data files, inserting the information into the db and
226#moving the files
227file=""
228printprocesslog "INFO processing optical files"
229echo "processing optical files..." >> $scriptlog 2>&1
230opticalfiles=`find $transdir/optical -regextype posix-egrep -regex "^$transdir/optical/20[0-9][0-9]_[0-1][0-9]_[0-3][0-9]_.*_[RV][_]?[12]?[.]instr$"`
231for opticalfile in $opticalfiles
232do
233 printprocesslog "INFO process "$opticalfile
234 file=`basename $opticalfile`
235 year=`echo $file | cut -c 0-4`
236 opticallogpath=$logpath/filloptical/$year
237 makedir $opticallogpath >> $scriptlog 2>&1
238 opticallogfile=$opticallogpath/filloptical-$file.log
239
240 checkfilloptical=`root -q -b $macrospath/filloptical.C+\("\"$opticalfile\""\,kFALSE\) | tee $opticallogfile | intgrep`
241
242 case $checkfilloptical in
243 1) echo " checkfilloptical=$checkfilloptical -> everything ok -> go on with moving file" >> $scriptlog 2>&1
244 newdir=$subsystempath/optical/$year
245 newfile=$newdir/$file
246 makedir $newdir >> $scriptlog 2>&1
247
248 if mv -v $opticalfile $newfile >> $scriptlog 2>&1
249 then
250 echo "moved "$opticalfile" successfully" >> $scriptlog 2>&1
251 printprocesslog "INFO moved "$opticalfile" successfully"
252 else
253 echo $opticalfile" couldn't be moved!!!!!" >> $scriptlog 2>&1
254 printprocesslog "WARN moving of file $opticalfile didn't work"
255 fi
256 ;;
257 3) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: position of one object is missing in the database" >> $scriptlog 2>&1
258 printprocesslog "ERROR filloptical.C failed for $opticalfile: position of one object is missing in the database"
259 continue ;;
260 4) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: telescope line with more or less than 2 arguments" >> $scriptlog 2>&1
261 printprocesslog "ERROR filloptical.C failed for $opticalfile: telescope line with more or less than 2 arguments"
262 continue ;;
263 5) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: timestamp line with more or less than 4 arguments" >> $scriptlog 2>&1
264 printprocesslog "ERROR filloptical.C failed for $opticalfile: timestamp line with more or less than 4 arguments"
265 continue ;;
266 6) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: object line with more or less than 8 arguments" >> $scriptlog 2>&1
267 printprocesslog "ERROR filloptical.C failed for $opticalfile: object line with more or less than 8 arguments"
268 continue ;;
269 *) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile -> go on with next file" >> $scriptlog 2>&1
270 printprocesslog "ERROR filloptical.C failed for $opticalfile (returned $checkfilloptical)"
271 continue ;;
272 esac
273done
274
275
276# third part of the script:
277#update the catalog file magic_favorites.edb
278printprocesslog "INFO processing new catalog files"
279echo "Processing new catalog files" >> $scriptlog 2>&1
280magfav=magic_favorites.edb #catalog filename
281catalog=$setuppath/$magfav #current catalogfile
282diff=/tmp/magic_favorites_diff #file to store difference
283
284#getting new catalogfiles
285for (( i=0 ; i < 31 ; i++ ))
286do
287 date=`date --date "-${i}day" +%Y/%m/%d`
288 path=$subsystempath/cc/$date
289 catfiles=$catfiles" "`find $path -name $magfav -newer $catalog`
290done
291
292for catfile in ${catfiles[@]}
293do
294 printprocesslog "INFO processing catalog file $catfile"
295 #write information into .diff
296 echo "diff $catfile $catalog" >| $diff
297 diff $catfile $catalog >> $diff
298 #getting differences
299 ins=`cat $diff | grep '>'` #what has been inserted
300 outs=`cat $diff | grep '<'` #what has been removed
301
302 #check if lines have been inserted
303 if ! [ "$ins" == "" ]
304 then
305 echo "--> catalogfile: "$catfile >> $scriptlog 2>&1
306 echo "the following lines were added:" >> $scriptlog 2>&1
307 cat $diff | grep '>' >> $scriptlog 2>&1
308
309 #check if lines have been removed
310 if ! [ "$outs" == "" ]
311 then
312 echo "the following lines have been removed" >> $scriptlog 2>&1
313 cat $diff | grep '<' >> $scriptlog 2>&1
314 echo " -> please check the file $catfile" >> $scriptlog 2>&1
315 #inform $adrs about removed lines
316 nail -s 'catalogfile - removed lines' $adrs < $diff
317 printprocesslog "NEWS catalog file: lines have been removed ($catfile)"
318 finish >> $scriptlog 2>&1
319 fi
320
321 #getting date of new catalogfile from path
322 date=`echo $catfile | cut -d/ -f5-7 | sed -e 's/\///g'`
323
324 oldcatalogpath=$setuppath/oldcatalogs
325 makedir $oldcatalogpath >> $scriptlog 2>&1
326 #rsync current catalogfile to directory with old catalogfiles including the date of the new catalogfile into the filename
327 if ! rsync -av $catalog $oldcatalogpath/$magfav.$date >> $scriptlog 2>&1
328 then
329 echo "could not do 'rsync -av $catalog $setuppath/oldcatalogs/$magfav.$date' -> exit" >> $scriptlog 2>&1
330 printprocesslog "ERROR rsync of catalog file ($catalog -> $oldcatalogpath/$magfav.$date) didn't work"
331 finish >> $scriptlog 2>&1
332 fi
333 #rsync new catalogfile to current catalogfile
334 if ! rsync -av $catfile $catalog >> $scriptlog 2>&1
335 then
336 echo "could not do 'rsync -av $catfile $catalog' -> exit" >> $scriptlog 2>&1
337 printprocesslog "ERROR rsync of catalog file ($catfile -> $catalog) didn't work"
338 finish >> $scriptlog 2>&1
339 fi
340 #inform $adrs about changes
341 echo "file has been rsynced sucessfully -> sending email" >> $scriptlog 2>&1
342 nail -s 'new catalogfile installed - new lines' $adrs < $diff
343 printprocesslog "NEWS there are new lines in the catalogfile (see $catalog)"
344 continue
345 fi
346 #check if lines have been removed
347 if ! [ "$outs" == "" ]
348 then
349 echo "the following lines have been removed" >> $scriptlog 2>&1
350 cat $diff | grep '<' >> $scriptlog 2>&1
351 echo " -> please check the file $catfile" >> $scriptlog 2>&1
352 #inform $adrs about removed lines
353 nail -s 'catalogfile - removed lines' $adrs < $diff
354 printprocesslog "NEWS catalog file: lines have been removed ($catfile)"
355 finish >> $scriptlog 2>&1
356 fi
357# echo "nothing has changed ($catfile)" >> $scriptlog 2>&1
358done
359
360finish >> $scriptlog 2>&1
361
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