|
Last change
on this file since 20029 was 17986, checked in by ghughes, 10 years ago |
|
batch scripts update
|
-
Property svn:executable
set to
*
|
|
File size:
860 bytes
|
| Line | |
|---|
| 1 | #!/bin/bash
|
|---|
| 2 |
|
|---|
| 3 | if [[ $# < 1 ]]
|
|---|
| 4 | then
|
|---|
| 5 | echo ""
|
|---|
| 6 | echo "FACT.sub_gan_mc.sh <input dir> <output dir>"
|
|---|
| 7 | echo ""
|
|---|
| 8 | exit
|
|---|
| 9 | fi
|
|---|
| 10 |
|
|---|
| 11 | cd $MARSSYS
|
|---|
| 12 |
|
|---|
| 13 | INDIR=$1
|
|---|
| 14 | OUTDIR=$2
|
|---|
| 15 |
|
|---|
| 16 | TEMPFILE="temp.gan.file"
|
|---|
| 17 |
|
|---|
| 18 | #NEED editing
|
|---|
| 19 | # TODO
|
|---|
| 20 | ls $INDIR/cer* | head -n 1 > $TEMPFILE
|
|---|
| 21 |
|
|---|
| 22 | while read LINE
|
|---|
| 23 | do
|
|---|
| 24 |
|
|---|
| 25 | INFILE=$LINE
|
|---|
| 26 |
|
|---|
| 27 | #NEED editing
|
|---|
| 28 | # TODO
|
|---|
| 29 | NUMBER=`echo $LINE | sed s/cer/" "/g | gawk '{print $2}'`
|
|---|
| 30 |
|
|---|
| 31 | QSUB=$MARSSYS"/batch/queue/FACT.qsub_gan_mc_"$NUMBER".sh"
|
|---|
| 32 | QSUBERR=$MARSSYS"/batch/queue/FACT.qsub_gan_mc_"$NUMBER".err"
|
|---|
| 33 | QSUBOUT=$MARSSYS"/batch/queue/FACT.qsub_gan_mc_"$NUMBER".out"
|
|---|
| 34 |
|
|---|
| 35 | sed -e "s|FFFFF|$INFILE|" \
|
|---|
| 36 | -e "s|DDDDD|$OUTDIR|" $MARSSYS"/batch/FACT.qsub_gan_mc.sh" > $QSUB
|
|---|
| 37 |
|
|---|
| 38 | chmod +x $QSUB
|
|---|
| 39 |
|
|---|
| 40 | ##qsub -q fact_medium -b yes -o $QSUBOUT -e $QSUBERR $QSUB
|
|---|
| 41 | qsub -q test -b yes -o $QSUBOUT -e $QSUBERR $QSUB
|
|---|
| 42 | ##qsub -b yes -o $QSUBOUT -e $QSUBERR $QSUB
|
|---|
| 43 |
|
|---|
| 44 | done <$TEMPFILE
|
|---|
| 45 |
|
|---|
| 46 | rm $TEMPFILE
|
|---|
Note:
See
TracBrowser
for help on using the repository browser.
