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source: branches/Mars_use_drstimefiles/fact/analysis/callisto_drstime.C@ 17994

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Last change on this file since 17994 was 17993, checked in by dneise, 10 years ago
using MSequence to get a path to the time-calib-rawfile. The reduced time calib fits file is named exactly like that, just in a different folder.
File size: 23.9 KB

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1	#include <sstream>
2	#include <iostream>
3
4	#include "MLog.h"
5	#include "MLogManip.h"
6
7	#include "TH1F.h"
8	#include "TFile.h"
9	#include "TStyle.h"
10	#include "TGraph.h"
11	#include "TLine.h"
12
13	#include "DrsCalib.h"
14	#include "factfits.h"
15	#include "MDrsCalibration.h"
16	#include "MExtralgoSpline.h"
17	#include "MSequence.h"
18	#include "MStatusArray.h"
19	#include "MHCamera.h"
20	#include "MJob.h"
21	#include "MWriteRootFile.h"
22	#include "MHCamera.h"
23	#include "MBadPixelsCam.h"
24	#include "MBadPixelsPix.h"
25	#include "MDirIter.h"
26	#include "MTaskList.h"
27	#include "MFDataPhrase.h"
28	#include "MArrayF.h"
29	#include "MBadPixelsTreat.h"
30	#include "MCalibrateDrsTimes.h"
31	#include "MHSectorVsTime.h"
32	#include "MHCamEvent.h"
33	#include "MExtractFACT.h"
34	#include "MFillH.h"
35	#include "MDrsCalibApply.h"
36	#include "MGeomApply.h"
37	#include "MContinue.h"
38	#include "MRawFitsRead.h"
39	#include "MReadMarsFile.h"
40	#include "MEvtLoop.h"
41	#include "MParList.h"
42	#include "MStatusDisplay.h"
43	#include "MDrsCalibrationTime.h"
44	#include "MH3.h"
45	#include "MGeomCamFACT.h"
46	#include "MCalibrateFact.h"
47	#include "MParameters.h"
48	#include "MWriteAsciiFile.h"
49	#include "MFilterData.h"
50	#include "MTreatSaturation.h"
51
52	using namespace std;
53
54	int callisto(
55	const char *seqfile="seq/2012/01/23/20120123_023.seq",
56	const char *outpath = "output",
57	bool use_delays=false
58	)
59	{
60	// ======================================================
61
62	// true: Display correctly mapped pixels in the camera displays
63	// but the value-vs-index plot is in software/spiral indices
64	// false: Display pixels in hardware/linear indices,
65	// but the order is the camera display is distorted
66	bool usemap = true;
67
68	// map file to use (get that from La Palma!)
69	// const char *map = usemap ? "/home/fact/FACT++/FACTmap111030.txt" : NULL;
70	const char *map = usemap ? "/scratch/fact/FACTmap111030.txt" : NULL;
71
72	// ------------------------------------------------------
73
74	MStatusDisplay *d = new MStatusDisplay;
75
76	MBadPixelsCam badpixels;
77	badpixels.InitSize(1440);
78	badpixels[ 424].SetUnsuitable(MBadPixelsPix::kUnsuitable);
79	badpixels[ 583].SetUnsuitable(MBadPixelsPix::kUnsuitable);
80	badpixels[ 830].SetUnsuitable(MBadPixelsPix::kUnsuitable);
81	badpixels[ 923].SetUnsuitable(MBadPixelsPix::kUnsuitable);
82	badpixels[1208].SetUnsuitable(MBadPixelsPix::kUnsuitable);
83	badpixels[1399].SetUnsuitable(MBadPixelsPix::kUnsuitable);
84	// Twin pixel
85	// 113
86	// 115
87	// 354
88	// 423
89	// 1195
90	// 1393
91
92	// ------------------------------------------------------
93
94	// ------------------------------------------------------
95
96	// Calib: 51 / 90 / 197 (20% TH)
97	// Data: 52 / 64 / 104 (20% TH)
98
99	// Extraction range in slices. It will always(!) contain the full range
100	// of integration
101	const int first_slice = 25; // 10ns
102	const int last_slice = 225; // 125ns
103
104	//const double heighttm = 0.5; // IntegralAbs { 1.5pe * 9.6mV/pe } / IntegralRel { 0.5 }
105
106	Long_t max = 0; // All
107	Long_t max1 = max; // Light pulser
108	//Long_t max2 = 3000; // Calibration ratio
109	Long_t max3 = max; // Pedestal Rndm
110	Long_t max4 = max; // Pedestal Ext
111	Long_t max5 = max; // Data
112
113	// ========================= Result ==================================
114
115	//double scale = 0.1;
116	double scale = 0.1024;
117
118	// ======================================================
119
120	if (map && gSystem->AccessPathName(map, kFileExists))
121	{
122	gLog << err << "ERROR - Cannot access mapping file '" << map << "'" << endl;
123	return 1;
124	}
125
126	// The sequence file which defines the files for the analysis
127	MSequence seq(seqfile);
128	if (!seq.IsValid())
129	{
130	gLog << err << "ERROR - Sequence '" << seqfile << "' invalid!" << endl;
131	return 2;
132	}
133
134	// --------------------------------------------------------------------------------
135
136	gLog.Separator("Callisto");
137	gLog << all << "Calibrate data of sequence '" << seq.GetFileName() << "'" << endl;
138	gLog << endl;
139
140	// ------------------------------------------------------
141
142	ostringstream drsname;
143	drsname << gSystem->DirName(seqfile) << "/";
144	drsname << seq.GetNight().GetNightAsInt() << "_";
145	drsname << Form("%03d", seq.GetDrsSequence()) << ".drs.seq";
146
147	MSequence drs(drsname.str().c_str());
148	if (!drs.IsValid())
149	{
150	gLog << err << "ERROR - DRS sequence invalid!" << endl;
151	return 3;
152	}
153
154	gLog << all << "DRS sequence file: " << drsname.str() << '\n' << endl;
155
156	TString drsfile = seq.GetFileName(0, MSequence::kRawDrs);
157	if (drsfile.IsNull())
158	{
159	gLog << err << "No DRS file available in sequence." << endl;
160	return 4;
161	}
162
163	TString timfile = drs.GetFileName(0, MSequence::kFitsDat, "/gpfs/fact/drs_time_calib");
164	TString drs1024 = drs.GetFileName(0, MSequence::kFitsDrs);
165	TString pedfile = seq.GetFileName(0, MSequence::kFitsPed);
166	TString calfile = seq.GetFileName(0, MSequence::kFitsCal);
167
168	gLog << all;
169	gLog << "DRS calib 300: " << drsfile << '\n';
170	gLog << "DRS calib 1024: " << drs1024 << "\n\n";
171
172	MDrsCalibration drscalib300;
173	if (!drscalib300.ReadFits(drsfile.Data()))
174	return 5;
175
176	MDrsCalibration drscalib1024;
177	if (!drscalib1024.ReadFits(drs1024.Data()))
178	return 6;
179
180	gLog << all;
181	gLog << "Time calibration : " << timfile << '\n';
182	gLog << "Pedestal file: " << pedfile << '\n';
183	gLog << "Light Pulser file: " << calfile << '\n' << endl;
184
185	// ------------------------------------------------------
186
187	MDirIter iter;
188	if (seq.GetRuns(iter, MSequence::kFitsDat)<=0)
189	{
190	gLog << err << "ERROR - Sequence valid but without files." << endl;
191	return 7;
192	}
193	iter.Print();
194
195	// ======================================================
196
197	/*
198	MStatusArray arrt, arrp;
199
200	TFile ft(lp_template);
201	if (arrt.Read()<=0)
202	{
203	gLog << err << "ERROR - Reading LP template from " << lp_template << endl;
204	return 100;
205	}
206
207	MHCamera lpref = (MHCamera)arrt.FindObjectInCanvas("ExtCalSig;avg", "MHCamera", "Cam");
208	if (!lpref)
209	{
210	gLog << err << "ERROR - LP Template not found in " << lp_template << endl;
211	return 101;
212	}
213	lpref->SetDirectory(0);
214
215	MHCamera gain = (MHCamera)arrt.FindObjectInCanvas("gain", "MHCamera", "Gain");
216	if (!gain)
217	{
218	gLog << err << "ERROR - Gain not found in " << lp_template << endl;
219	return 101;
220	}
221	gain->SetDirectory(0);
222
223	TFile fp(pulse_template);
224	if (arrp.Read()<=0)
225	{
226	gLog << err << "ERROR - Reading Pulse template from " << pulse_template << endl;
227	return 102;
228	}
229
230	TH1F hpulse = (TH1F)arrp.FindObjectInCanvas("hPixelEdgeMean0_0", "TH1F", "cgpPixelPulses0");
231	if (!hpulse)
232	{
233	gLog << err << "ERROR - Pulse Template not found in " << pulse_template << endl;
234	return 103;
235	}
236	hpulse->SetDirectory(0);
237	*/
238	// ======================================================
239
240	// Plot the trigger pattern rates vs. run-number
241	MH3 hrate("MRawRunHeader.GetFileID", "MRawEvtHeader.GetTriggerID&0xff00");
242	hrate.SetWeight("1./TMath::Max(MRawRunHeader.GetRunLength,1)");
243	hrate.SetName("Rate");
244	hrate.SetTitle("Event rate [Hz];File Id;Trigger Type;");
245	hrate.InitLabels(MH3::kLabelsXY);
246	hrate.DefineLabelY( 0, "Data"); // What if TriggerID==0 already???
247	hrate.DefineLabelY(0x100, "Cal");
248	hrate.DefineLabelY(0x400, "Ped");
249	// hrate.DefaultLabelY("ERROR");
250
251	MDrsCalibrationTime timecam;
252
253	gStyle->SetOptFit(kTRUE);
254
255	// ======================================================
256
257	gLog << endl;
258	gLog.Separator("Reading DRS timing calibration constants");
259	factfits drs_time_file(timfile.Data());
260
261	const int NumberOfChips = drs_time_file.GetInt("NCHIPS");
262	const int NumberOfCells = drs_time_file.GetInt("NCELLS");
263	timecam.fStat.resize(NumberOfChips * NumberOfCells);
264	double drs_sampling_time_deviations = new double[NumberOfChips NumberOfCells];
265
266	drs_time_file.SetPtrAddress("SamplingTimeDeviation", drs_sampling_time_deviations);
267	drs_time_file.GetNextRow();
268	for (int i=0; i<NumberOfChips * NumberOfCells; i++){
269	timecam.fStat[i].first = drs_sampling_time_deviations[i];
270	}
271	delete[] drs_sampling_time_deviations;
272	drs_sampling_time_deviations = NULL;
273	drs_time_file.close();
274
275	// ======================================================
276
277	gLog << endl;
278	gLog.Separator("Processing external light pulser run");
279
280	MTaskList tlist1;
281
282	MParList plist1;
283	plist1.AddToList(&tlist1);
284	plist1.AddToList(&drscalib300);
285	plist1.AddToList(&badpixels);
286	plist1.AddToList(&timecam);
287
288	MEvtLoop loop1("DetermineCalConst");
289	loop1.SetDisplay(d);
290	loop1.SetParList(&plist1);
291
292	// ------------------ Setup the tasks ---------------
293
294	MRawFitsRead read1;
295	read1.LoadMap(map);
296	read1.AddFile(calfile);
297
298	MContinue cont1("(MRawEvtHeader.GetTriggerID&0xff00)!=0x100", "SelectCal");
299
300	MGeomApply apply1;
301
302	MDrsCalibApply drsapply1;
303	//drsapply1.SetRemoveSpikes(4);
304
305	MFilterData filterdata1;
306
307	// ---
308
309	MExtractFACT extractor1b("ExtractPulse");
310	extractor1b.SetRange(first_slice, last_slice);
311	extractor1b.SetNoiseCalculation(kFALSE);
312
313	// ---
314
315	MHCamEvent evt1f(0, "ExtCalSig", "Extracted calibration signal;;S [mV·sl]");
316	MHCamEvent evt1g(4, "ExtCalTm", "Extracted arrival times;;T [sl]");
317	MHCamEvent evt1h(6, "CalCalTm", "Calibrated arrival times;;T [sl]");
318
319	MHSectorVsTime hist1rmsb("ExtSigVsTm");
320	MHSectorVsTime hist1tmb("CalTmVsTm");
321	hist1rmsb.SetTitle("Extracted calibration vs event number;;S [mV·sl]");
322	hist1rmsb.SetType(0);
323	hist1tmb.SetTitle("Extracted arrival time vs event number;;T [sl]");
324	//hist1tmb.SetType(4);
325	hist1tmb.SetType(6);
326
327	MFillH fill1f(&evt1f, "MExtractedSignalCam", "FillExtSig");
328	MFillH fill1g(&evt1g, "MArrivalTimeCam", "FillExtTm");
329	MFillH fill1h(&evt1h, "MSignalCam", "FillCalTm");
330	MFillH fill1r(&hist1rmsb, "MExtractedSignalCam", "FillExtSigVsTm");
331	//MFillH fill1j(&hist1tmb, "MArrivalTimeCam", "FillExtTmVsTm");
332	MFillH fill1j(&hist1tmb, "MSignalCam", "FillCalTmVsTm");
333
334	fill1f.SetDrawOption("gaus");
335	fill1h.SetDrawOption("gaus");
336
337	// ---
338
339	MCalibrateDrsTimes calctm1a("CalibrateCalEvents");
340	calctm1a.SetNameUncalibrated("UncalibratedTimes");
341
342	MBadPixelsTreat treat1;
343	treat1.SetProcessPedestalRun(kFALSE);
344	treat1.SetProcessPedestalEvt(kFALSE);
345
346	// ---
347
348	MHCamEvent evt1c(6, "ExtCalTmShift", "Relative extracted arrival time of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
349	MHCamEvent evt1d(6, "CalCalTmShift", "Relative calibrated arrival time of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
350
351	evt1c.SetMedianShift();
352	evt1d.SetMedianShift();
353
354	MFillH fill1c(&evt1c, "UncalibratedTimes", "FillExtCalTm");
355	MFillH fill1d(&evt1d, "MSignalCam", "FillCalCalTm");
356	fill1d.SetDrawOption("gaus");
357
358	// ------------------ Setup eventloop and run analysis ---------------
359
360	tlist1.AddToList(&read1);
361	tlist1.AddToList(&apply1);
362	tlist1.AddToList(&drsapply1);
363	tlist1.AddToList(&cont1);
364	tlist1.AddToList(&filterdata1);
365	tlist1.AddToList(&extractor1b);
366	tlist1.AddToList(&calctm1a);
367	tlist1.AddToList(&treat1);
368	tlist1.AddToList(&fill1f);
369	tlist1.AddToList(&fill1g);
370	tlist1.AddToList(&fill1h);
371	tlist1.AddToList(&fill1r);
372	tlist1.AddToList(&fill1j);
373	tlist1.AddToList(&fill1c);
374	tlist1.AddToList(&fill1d);
375
376	if (!loop1.Eventloop(max1))
377	return 10;
378
379	if (!loop1.GetDisplay())
380	return 11;
381
382	if (use_delays)
383	timecam.SetDelays(*evt1h.GetHist());
384
385	// ======================================================
386
387	gLog << endl;
388	gLog.Separator("Extracting random pedestal");
389
390	MTaskList tlist3;
391
392	MParList plist3;
393	plist3.AddToList(&tlist3);
394	plist3.AddToList(&drscalib300);
395	plist3.AddToList(&badpixels);
396	plist3.AddToList(&timecam);
397
398	MEvtLoop loop3("DetermineRndmPed");
399	loop3.SetDisplay(d);
400	loop3.SetParList(&plist3);
401
402	// ------------------ Setup the tasks ---------------
403
404	MRawFitsRead read3;
405	read3.LoadMap(map);
406	read3.AddFile(pedfile);
407
408	MFillH fill3a(&hrate);
409
410	MContinue cont3("(MRawEvtHeader.GetTriggerID&0xff00)!=0x400", "SelectPed");
411
412	MGeomApply apply3;
413
414	MDrsCalibApply drsapply3;
415	//drsapply3.SetRemoveSpikes(4);
416
417	MFilterData filterdata3;
418
419	//---
420
421	MExtractFACT extractor3;
422	extractor3.SetRange(first_slice, last_slice);
423	extractor3.SetNoiseCalculation(kTRUE);
424
425	MCalibrateFact conv3;
426	conv3.SetScale(scale);
427	//conv3.SetCalibConst(calib);
428
429	MBadPixelsTreat treat3;
430	treat3.SetProcessPedestalRun(kFALSE);
431	treat3.SetProcessPedestalEvt(kFALSE);
432	treat3.SetProcessTimes(kFALSE);
433
434	MHCamEvent evt3b(0, "PedRdm","Interpolated random pedestal;;Signal [~phe]");
435	//evt2b.SetErrorSpread(kFALSE);
436
437	MFillH fill3b(&evt3b, "MSignalCam", "FillPedRdm");
438	fill3b.SetDrawOption("gaus");
439
440	// ------------------ Setup eventloop and run analysis ---------------
441
442	tlist3.AddToList(&read3);
443	tlist3.AddToList(&apply3);
444	tlist3.AddToList(&drsapply3);
445	tlist3.AddToList(&cont3);
446	tlist3.AddToList(&filterdata3);
447	tlist3.AddToList(&extractor3);
448	// tlist3.AddToList(&fill3a);
449	tlist3.AddToList(&conv3);
450	tlist3.AddToList(&treat3);
451	tlist3.AddToList(&fill3b);
452
453	if (!loop3.Eventloop(max3))
454	return 14;
455
456	if (!loop3.GetDisplay())
457	return 15;
458
459	// ======================================================
460
461	gLog << endl;
462	gLog.Separator("Extracting pedestal");
463
464	MTaskList tlist4;
465
466	MParList plist4;
467	plist4.AddToList(&tlist4);
468	plist4.AddToList(&drscalib300);
469	plist4.AddToList(&badpixels);
470	plist4.AddToList(&timecam);
471
472	MEvtLoop loop4("DetermineExtractedPed");
473	loop4.SetDisplay(d);
474	loop4.SetParList(&plist4);
475
476	// ------------------ Setup the tasks ---------------
477
478	MRawFitsRead read4;
479	read4.LoadMap(map);
480	read4.AddFile(pedfile);
481
482	MContinue cont4("(MRawEvtHeader.GetTriggerID&0xff00)!=0x400", "SelectPed");
483
484	MGeomApply apply4;
485
486	MDrsCalibApply drsapply4;
487	//drsapply4.SetRemoveSpikes(4);
488
489	MFilterData filterdata4;
490
491	MExtractFACT extractor4;
492	extractor4.SetRange(first_slice, last_slice);
493	extractor4.SetNoiseCalculation(kFALSE);
494
495	MCalibrateFact conv4;
496	conv4.SetScale(scale);
497	//conv4.SetCalibConst(calib);
498
499	MBadPixelsTreat treat4;
500	treat4.SetProcessPedestalRun(kFALSE);
501	treat4.SetProcessPedestalEvt(kFALSE);
502
503	MHCamEvent evt4b(0, "PedExt","Interpolated extracted pedestal;;Signal [~phe]");
504	//evt4b.SetErrorSpread(kFALSE);
505
506	MFillH fill4b(&evt4b, "MSignalCam", "FillPedExt");
507	fill4b.SetDrawOption("gaus");
508
509	// ------------------ Setup eventloop and run analysis ---------------
510
511	tlist4.AddToList(&read4);
512	tlist4.AddToList(&apply4);
513	tlist4.AddToList(&drsapply4);
514	tlist4.AddToList(&cont4);
515	tlist4.AddToList(&filterdata4);
516	tlist4.AddToList(&extractor4);
517	tlist4.AddToList(&conv4);
518	tlist4.AddToList(&treat4);
519	tlist4.AddToList(&fill4b);
520
521	if (!loop4.Eventloop(max4))
522	return 15;
523
524	if (!loop4.GetDisplay())
525	return 16;
526
527	// ===================================================================
528
529	gLog << endl;
530	gLog.Separator("Extracting and calibration data");
531
532	MTaskList tlist5;
533
534	MParList plist5;
535	plist5.AddToList(&tlist5);
536	plist5.AddToList(&drscalib300);
537	plist5.AddToList(&badpixels);
538	plist5.AddToList(&timecam);
539
540	MEvtLoop loop5("CalibratingData");
541	loop5.SetDisplay(d);
542	loop5.SetParList(&plist5);
543
544	// ------------------ Setup the tasks ---------------
545
546	MRawFitsRead read5;
547	read5.LoadMap(map);
548	read5.AddFiles(iter);
549
550	MFillH fill5a(&hrate);
551
552	MGeomApply apply5;
553
554	MDrsCalibApply drsapply5;
555	//drsapply5.SetRemoveSpikes(4);
556
557	MTreatSaturation treatsat5;
558
559	MFilterData filterdata5;
560
561	MFDataPhrase filterdat("(MRawEvtHeader.GetTriggerID&0xff00)==0", "SelectDat");
562	MFDataPhrase filtercal("(MRawEvtHeader.GetTriggerID&0xff00)==0x100", "SelectCal");
563	MFDataPhrase filterped("(MRawEvtHeader.GetTriggerID&0xff00)==0x400", "SelectPed");
564	MFDataPhrase filterncl("(MRawEvtHeader.GetTriggerID&0xff00)!=0x100", "SelectNonCal");
565
566	//MContinue cont4("MRawEvtHeader.GetTriggerID!=4", "SelectData");
567
568	// ---
569
570	MExtractFACT extractor5dat;
571	extractor5dat.SetRange(first_slice, last_slice);
572	extractor5dat.SetNoiseCalculation(kFALSE);
573
574	MExtractFACT extractor5cal;
575	extractor5cal.SetRange(first_slice, last_slice);
576	extractor5cal.SetNoiseCalculation(kFALSE);
577
578	MExtractFACT extractor5tm("ExtractTM");
579	extractor5tm.SetRange(last_slice, 294);
580	extractor5tm.SetNoiseCalculation(kFALSE);
581	extractor5tm.SetNameSignalCam("TimeMarkerAmplitude");
582	extractor5tm.SetNameTimeCam("TimeMarkerTime");
583
584	extractor5dat.SetFilter(&filterncl);
585	extractor5cal.SetFilter(&filtercal);
586	//extractor4tm.SetFilter(&filtercal);
587
588	// ---
589	MCalibrateFact conv5;
590	conv5.SetScale(scale);
591	//conv5.SetCalibConst(calib);
592
593	MCalibrateDrsTimes calctm5;
594	calctm5.SetNameUncalibrated("UncalibratedTimes");
595
596	MCalibrateDrsTimes calctm5tm("CalibrateTimeMarker");
597	calctm5tm.SetNameArrivalTime("TimeMarkerTime");
598	calctm5tm.SetNameUncalibrated("UncalTimeMarker");
599	calctm5tm.SetNameCalibrated("TimeMarker");
600	calctm5tm.SetTimeMarker();
601	//calctm4tm.SetFilter(&filtercal);
602
603	MHCamEvent evt5m(6, "ExtTm", "Extracted arrival times of calibration pulse;;\\Delta T [ns]");
604	MHCamEvent evt5n(6, "CalTm", "Calibrated arrival times of calibration pulse;;\\Delta T [ns]");
605	MHCamEvent evt5q(6, "ExtTmShift", "Relative extracted arrival times of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
606	MHCamEvent evt5r(6, "CalTmShift", "Relative calibrated arrival times of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
607	MHCamEvent evt5s(6, "ExtTM", "Extracted absolute time marker position;;T [sl]");
608	MHCamEvent evt5t(6, "CalTM", "Calibrated absolute time marker position;;T [ns]");
609	MHCamEvent evt5u(6, "ExtTMshift", "Relative extracted time marker position (w.r.t. event-median);;\\Delta T [ns]");
610	MHCamEvent evt5v(6, "CalTMshift", "Relative calibrated time marker position (w.r.t. event-median);;\\Delta T [ns]");
611	MHCamEvent evt5w(6, "ExtDiff", "Difference between extracted arrival time of time marker and calibration pulse;;\\Delta T [ns]");
612	MHCamEvent evt5x(6, "CalDiff", "Difference between calibrated arrival time of time marker and calibration pulse;;\\Delta T [ns]");
613
614	evt5w.SetNameSub("UncalibratedTimes");
615	evt5x.SetNameSub("MSignalCam");
616
617	evt5q.SetMedianShift();
618	evt5r.SetMedianShift();
619	evt5u.SetMedianShift();
620	evt5v.SetMedianShift();
621	//evt4w.SetMedianShift();
622	//evt4x.SetMedianShift();
623
624	MFillH fill5m(&evt5m, "UncalibratedTimes", "FillExtTm");
625	MFillH fill5n(&evt5n, "MSignalCam", "FillCalTm");
626	MFillH fill5q(&evt5q, "UncalibratedTimes", "FillExtTmShift");
627	MFillH fill5r(&evt5r, "MSignalCam" , "FillCalTmShift");
628	MFillH fill5s(&evt5s, "UncalTimeMarker", "FillExtTM");
629	MFillH fill5t(&evt5t, "TimeMarker", "FillCalTM");
630	MFillH fill5u(&evt5u, "UncalTimeMarker", "FillExtTMshift");
631	MFillH fill5v(&evt5v, "TimeMarker", "FillCalTMshift");
632	MFillH fill5w(&evt5w, "UncalTimeMarker", "FillExtDiff");
633	MFillH fill5x(&evt5x, "TimeMarker", "FillCalDiff");
634
635	fill5m.SetDrawOption("gaus");
636	fill5n.SetDrawOption("gaus");
637	fill5q.SetDrawOption("gaus");
638	fill5r.SetDrawOption("gaus");
639	//fill5s.SetDrawOption("gaus");
640	//fill5t.SetDrawOption("gaus");
641	//fill5u.SetDrawOption("gaus");
642	//fill5v.SetDrawOption("gaus");
643	//fill5w.SetDrawOption("gaus");
644	//fill5x.SetDrawOption("gaus");
645
646
647	MBadPixelsTreat treat5;
648	treat5.SetProcessPedestalRun(kFALSE);
649	treat5.SetProcessPedestalEvt(kFALSE);
650
651	MHSectorVsTime hist5cal("CalVsTm");
652	MHSectorVsTime hist5ped("PedVsTm");
653	hist5cal.SetTitle("Median calibrated calibration signal vs event number;;Signal [~phe]");
654	hist5ped.SetTitle("Median calibrated pedestal signal vs event number;;Signal [~phe]");
655	hist5cal.SetType(0);
656	hist5ped.SetType(0);
657	hist5cal.SetMinimum(0);
658	hist5ped.SetMinimum(0);
659	hist5cal.SetUseMedian();
660	hist5ped.SetUseMedian();
661	hist5cal.SetNameTime("MTime");
662	hist5ped.SetNameTime("MTime");
663
664	MFillH fill5cal(&hist5cal, "MSignalCam", "FillCalVsTm");
665	MFillH fill5ped(&hist5ped, "MSignalCam", "FillPedVsTm");
666	fill5cal.SetFilter(&filtercal);
667	fill5ped.SetFilter(&filterped);
668
669	MHCamEvent evt5b(0, "ExtSig", "Extracted signal;;S [mV·sl]");
670	MHCamEvent evt5c(0, "CalSig", "Calibrated and interpolated signal;;S [~phe]");
671	MHCamEvent evt5d(4, "ExtSigTm", "Extracted time;;T [sl]");
672	MHCamEvent evt5e(6, "CalSigTm", "Calibrated and interpolated time;;T [ns]");
673
674	MFillH fill5b(&evt5b, "MExtractedSignalCam", "FillExtSig");
675	MFillH fill5c(&evt5c, "MSignalCam", "FillCalSig");
676	MFillH fill5d(&evt5d, "MArrivalTimeCam", "FillExtTm");
677	MFillH fill5e(&evt5e, "MSignalCam", "FillCalTm");
678
679	fill5c.SetDrawOption("gaus");
680	fill5d.SetDrawOption("gaus");
681	fill5e.SetDrawOption("gaus");
682
683	/*
684	fill4b.SetFilter(&filterdat);
685	fill4c.SetFilter(&filterdat);
686	fill4d.SetFilter(&filterdat);
687	fill4e.SetFilter(&filterdat);
688	*/
689
690	//MFSoftwareTrigger swtrig;
691	//MContinue contsw(&swtrig, "FilterSwTrigger", "Software trigger");
692	//contsw.SetInverted();
693
694	const TString fname(Form("s/([0-9]+_[0-9]+)[.]fits([.][fg]z)?$/%s\\/$1_C.root/",
695	MJob::Esc(outpath).Data()));
696
697	// The second rule is for the case reading raw-files!
698	MWriteRootFile write5(2, fname, "RECREATE", "Calibrated Data");
699	write5.AddContainer("MRawRunHeader", "RunHeaders");
700	write5.AddContainer("MGeomCam", "RunHeaders");
701	write5.AddContainer("MSignalCam", "Events");
702	write5.AddContainer("MTime", "Events");
703	write5.AddContainer("MRawEvtHeader", "Events");
704	//write.AddContainer("MTriggerPattern", "Events");
705
706	// ------------------ Setup histograms and fill tasks ----------------
707
708	MContinue test;
709	test.SetFilter(&filterncl);
710
711	MTaskList tlist5tm;
712	tlist5tm.AddToList(&extractor5tm);
713	tlist5tm.AddToList(&calctm5tm);
714	tlist5tm.AddToList(&fill5m);
715	tlist5tm.AddToList(&fill5n);
716	tlist5tm.AddToList(&fill5q);
717	tlist5tm.AddToList(&fill5r);
718	//tlist5tm.AddToList(&fill5s);
719	//tlist5tm.AddToList(&fill5t);
720	tlist5tm.AddToList(&fill5u);
721	tlist5tm.AddToList(&fill5v);
722	tlist5tm.AddToList(&fill5w);
723	tlist5tm.AddToList(&fill5x);
724	tlist5tm.SetFilter(&filtercal);
725
726	MTaskList tlist5dat;
727	tlist5dat.AddToList(&fill5b);
728	tlist5dat.AddToList(&fill5c);
729	tlist5dat.AddToList(&fill5d);
730	tlist5dat.AddToList(&fill5e);
731	tlist5dat.SetFilter(&filterdat);
732
733	tlist5.AddToList(&read5);
734	tlist5.AddToList(&apply5);
735	tlist5.AddToList(&drsapply5);
736	tlist5.AddToList(&filterncl);
737	//tlist5.AddToList(&test);
738	tlist5.AddToList(&filterdat);
739	tlist5.AddToList(&filtercal);
740	tlist5.AddToList(&filterped);
741	tlist5.AddToList(&fill5a);
742	tlist5.AddToList(&treatsat5);
743	tlist5.AddToList(&filterdata5);
744	tlist5.AddToList(&extractor5dat);
745	tlist5.AddToList(&extractor5cal);
746	tlist5.AddToList(&calctm5);
747	tlist5.AddToList(&tlist5tm);
748	tlist5.AddToList(&conv5);
749	tlist5.AddToList(&treat5);
750	tlist5.AddToList(&fill5ped);
751	tlist5.AddToList(&fill5cal);
752	tlist5.AddToList(&tlist5dat);
753	tlist5.AddToList(&write5);
754
755	if (!loop5.Eventloop(max5))
756	return 18;
757
758	if (!loop5.GetDisplay())
759	return 19;
760
761	TString title = "-- Calibrated signal #";
762	title += seq.GetSequence();
763	title += " (";
764	title += drsfile;
765	title += ") --";
766	d->SetTitle(title, kFALSE);
767
768	TString path;
769	path += Form("%s/20%6d_%03d-calibration.root", outpath,
770	seq.GetSequence()/1000, seq.GetSequence()%1000);
771
772	d->SaveAs(path);
773
774	return 0;
775	}

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