| 1 | #!/bin/bash
|
|---|
| 2 |
|
|---|
| 3 | # new version of the script to run on newdaq
|
|---|
| 4 |
|
|---|
| 5 | # option whether to fill all row or only those where information is missing
|
|---|
| 6 | # $doupdate might be given as environment variable
|
|---|
| 7 | if [ "$doupdate" = "" ]
|
|---|
| 8 | then
|
|---|
| 9 | # doupdate="yes" # update all entries (needed when new fields have been added)
|
|---|
| 10 | # doupdate="force" # needed when something with insert in La Palma did not work (adds more information)
|
|---|
| 11 | doupdate="no" # fill only entries which are not yet existing (default)
|
|---|
| 12 | fi
|
|---|
| 13 |
|
|---|
| 14 | source `dirname $0`/../Sourcefile.sh
|
|---|
| 15 | printprocesslog "INFO starting $0 with option doupdate="$doupdate
|
|---|
| 16 |
|
|---|
| 17 | logfile=$runlogpath"/FillAuxData-"$datetime".log"
|
|---|
| 18 | date >> $logfile
|
|---|
| 19 |
|
|---|
| 20 | # check if software is available
|
|---|
| 21 | if ! ls $factpath/fitsdump >/dev/null 2>&1
|
|---|
| 22 | then
|
|---|
| 23 | printprocesslog "ERROR "$factpath"/fitsdump is not available."
|
|---|
| 24 | finish
|
|---|
| 25 | fi
|
|---|
| 26 |
|
|---|
| 27 | # get dates
|
|---|
| 28 | if [ "$certaindate" != "" ]
|
|---|
| 29 | then
|
|---|
| 30 | checkstring=`echo $certaindate | grep -E -o '^20[0-9][0-9]\/[01][0-9]\/[0-3][0-9]$'`
|
|---|
| 31 | if [ "$checkstring" = "" ]
|
|---|
| 32 | then
|
|---|
| 33 | echo "Please give the variable certaindate in the correct format (YYYY/MM/DD)"
|
|---|
| 34 | finish
|
|---|
| 35 | fi
|
|---|
| 36 | getdates $certaindate
|
|---|
| 37 | else
|
|---|
| 38 | # get all night
|
|---|
| 39 | #getdates "all"
|
|---|
| 40 | # get last 3 nights if hour between 7 and 19h, else only current night
|
|---|
| 41 | getdates 3 7 19
|
|---|
| 42 | fi
|
|---|
| 43 |
|
|---|
| 44 |
|
|---|
| 45 | printprocesslog "INFO processing the following night(s): "${dates[@]}
|
|---|
| 46 | echo `date`": processing the following night(s): "${dates[@]} >> $logfile 2>&1
|
|---|
| 47 |
|
|---|
| 48 | # mjd of 1970-01-01
|
|---|
| 49 | # needed in this script as for 1 day the mjd in the aux files are inconsistent
|
|---|
| 50 | # mjdref=40587
|
|---|
| 51 |
|
|---|
| 52 | # known:
|
|---|
| 53 | # 2011/11/22 MJDREF in DRIVE empty, Time > 55000
|
|---|
| 54 | # 2011/11/23 MJDREF in DRIVE not empty, Time > 55000
|
|---|
| 55 | # 2011/11/24 MJDREF in DRIVE not empty, Time > 15000
|
|---|
| 56 | # raw files
|
|---|
| 57 | # 2011/11/21 no MJDREF
|
|---|
| 58 | # 2011/11/22 MJDREF
|
|---|
| 59 | # further things: https://www.fact-project.org/logbook/showthread.php?tid=67
|
|---|
| 60 |
|
|---|
| 61 | # trigger rate has as first value -1, but with using the median it should be fine
|
|---|
| 62 |
|
|---|
| 63 |
|
|---|
| 64 | function evaluatestatistics()
|
|---|
| 65 | {
|
|---|
| 66 | # $1 variable name
|
|---|
| 67 | # $@ statistics
|
|---|
| 68 | if [ "$2" = "" ]
|
|---|
| 69 | then
|
|---|
| 70 | printprocesslog "WARN couldn't get statistics from file $1 for run "$date" "$file
|
|---|
| 71 | continue
|
|---|
| 72 | fi
|
|---|
| 73 | min=
|
|---|
| 74 | mean=
|
|---|
| 75 | med=
|
|---|
| 76 | max=
|
|---|
| 77 | rms=
|
|---|
| 78 | evaluation=`echo $@ | grep -E -o '\['${1}':0[:]?[0-9]*\]\ Min:\ [-]?[0-9]+[.]?[0-9]*\ Max:\ [-]?[0-9]+[.]?[0-9]*\ Med:\ [-]?[0-9]+[.]?[0-9]*\ Avg:\ [-]?[0-9]+[.]?[0-9]*\ Rms:\ [-]?[0-9]+[.]?[0-9]*[e]?[-]?[0-9]*'`
|
|---|
| 79 | if [ "$evaluation" = "" ]
|
|---|
| 80 | then
|
|---|
| 81 | printprocesslog "WARN empty evaluation of statistic ("$@") for run "$date" "$file
|
|---|
| 82 | #echo " ---> "$@
|
|---|
| 83 | fi
|
|---|
| 84 | #echo "ev: "$evaluation
|
|---|
| 85 | min=`echo $evaluation | grep -E -o 'Min:\ [-]?[0-9]+[.]?[0-9]*' | sed -e 's/Min:\ //'`
|
|---|
| 86 | max=`echo $evaluation | grep -E -o 'Max:\ [-]?[0-9]+[.]?[0-9]*' | sed -e 's/Max:\ //'`
|
|---|
| 87 | med=`echo $evaluation | grep -E -o 'Med:\ [-]?[0-9]+[.]?[0-9]*' | sed -e 's/Med:\ //'`
|
|---|
| 88 | mean=`echo $evaluation | grep -E -o 'Avg:\ [-]?[0-9]+[.]?[0-9]*' | sed -e 's/Avg:\ //'`
|
|---|
| 89 | rms=`echo $evaluation | grep -E -o 'Rms:\ [-]?[0-9]+[.]?[0-9]*[e]?[-]?[0-9]+' | sed -e 's/Rms:\ //'`
|
|---|
| 90 | #echo "eval: "$min" "$max" "$med" "$mean" "$rms
|
|---|
| 91 | }
|
|---|
| 92 |
|
|---|
| 93 | # do filling of aux data
|
|---|
| 94 | for date in ${dates[@]}
|
|---|
| 95 | do
|
|---|
| 96 | auxdir=$auxdata/$date
|
|---|
| 97 | rawdir=$rawdata/$date
|
|---|
| 98 | runnumber=`echo $date | sed -e 's/\///g'`
|
|---|
| 99 |
|
|---|
| 100 | # check if aux files are available from that night
|
|---|
| 101 | if ! [ -d $auxdir ]
|
|---|
| 102 | then
|
|---|
| 103 | printprocesslog "INFO no data available in "$auxdir
|
|---|
| 104 | continue
|
|---|
| 105 | else
|
|---|
| 106 | printprocesslog "INFO processing files in "$auxdir
|
|---|
| 107 | #echo "INFO processing files in "$auxdir
|
|---|
| 108 | fi
|
|---|
| 109 |
|
|---|
| 110 | # check if raw files are available from that night
|
|---|
| 111 | # only needed to get start/stop time
|
|---|
| 112 | # might be removed once the start/stop time comes from the DB
|
|---|
| 113 | if ! [ -d $rawdir ]
|
|---|
| 114 | then
|
|---|
| 115 | printprocesslog "INFO no data available in "$rawdir" -> continue"
|
|---|
| 116 | continue
|
|---|
| 117 | fi
|
|---|
| 118 |
|
|---|
| 119 | # get file numbers from DB
|
|---|
| 120 | # but only for not-corrupted files
|
|---|
| 121 | # as aux files are written only once a minute, select only files which are older than 1.5 minutes
|
|---|
| 122 | query="SELECT fRunID from RunInfo WHERE fNight="$runnumber" AND fFitsFileErrors=0 AND NOT ISNULL(fRunStop) AND fRunStop < SUBTIME(UTC_TIMESTAMP(), \"00:01:30\")"
|
|---|
| 123 | # only runs which are not yet filled
|
|---|
| 124 | if [ "$doupdate" = "no" ]
|
|---|
| 125 | then
|
|---|
| 126 | query=$query" AND ISNULL(fRightAscension) "
|
|---|
| 127 | fi
|
|---|
| 128 | printprocesslog "DEBUG get filenumbers from DB: QUERY: "$query
|
|---|
| 129 | filenumbers=( `sendquery $query` )
|
|---|
| 130 | if [ ${#filenumbers} -eq 0 ]
|
|---|
| 131 | then
|
|---|
| 132 | printprocesslog "INFO No files found in the DB for night "$date
|
|---|
| 133 | continue
|
|---|
| 134 | fi
|
|---|
| 135 |
|
|---|
| 136 | # get daily fits files
|
|---|
| 137 | trackingfile=$auxdir/$runnumber.DRIVE_CONTROL_TRACKING_POSITION.fits
|
|---|
| 138 | if ! [ -e $trackingfile ]
|
|---|
| 139 | then
|
|---|
| 140 | printprocesslog "WARN "$trackingfile" not found."
|
|---|
| 141 | fi
|
|---|
| 142 |
|
|---|
| 143 | sourceposfile=$auxdir/$runnumber.DRIVE_CONTROL_SOURCE_POSITION.fits
|
|---|
| 144 | if ! [ -e $sourceposfile ]
|
|---|
| 145 | then
|
|---|
| 146 | printprocesslog "WARN "$sourceposfile" not found."
|
|---|
| 147 | else
|
|---|
| 148 | sourceposfiletstarti=`$factpath/fitsdump -h $sourceposfile 2>/dev/null | grep 'TSTARTI' | grep -E -o '[0-9]{5}'`
|
|---|
| 149 | sourceposfiletstartf=`$factpath/fitsdump -h $sourceposfile 2>/dev/null | grep 'TSTARTF' | grep -E -o '0[.][0-9]+'`
|
|---|
| 150 | if [ $sourceposfiletstarti -gt 30000 ]
|
|---|
| 151 | then
|
|---|
| 152 | sourceposfiletstart=`echo " $sourceposfiletstarti + $sourceposfiletstartf - 40587 " | bc -l`
|
|---|
| 153 | else
|
|---|
| 154 | sourceposfiletstart=`echo " $sourceposfiletstarti + $sourceposfiletstartf " | bc -l`
|
|---|
| 155 | fi
|
|---|
| 156 | fi
|
|---|
| 157 |
|
|---|
| 158 | triggerratefile=$auxdir/$runnumber.FTM_CONTROL_TRIGGER_RATES.fits
|
|---|
| 159 | if ! [ -e $triggerratefile ]
|
|---|
| 160 | then
|
|---|
| 161 | printprocesslog "WARN "$triggerratefile" not found."
|
|---|
| 162 | fi
|
|---|
| 163 |
|
|---|
| 164 | thresholdfile=$auxdir/$runnumber.FTM_CONTROL_STATIC_DATA.fits
|
|---|
| 165 | if ! [ -e $thresholdfile ]
|
|---|
| 166 | then
|
|---|
| 167 | printprocesslog "WARN "$thresholdfile" not found."
|
|---|
| 168 | fi
|
|---|
| 169 |
|
|---|
| 170 | biasvoltagefile=$auxdir/$runnumber.BIAS_CONTROL_VOLTAGE.fits
|
|---|
| 171 | if ! [ -e $biasvoltagefile ]
|
|---|
| 172 | then
|
|---|
| 173 | printprocesslog "WARN "$biasvoltagefile" not found."
|
|---|
| 174 | fi
|
|---|
| 175 |
|
|---|
| 176 | # fill auxiliary information for files
|
|---|
| 177 | for filenum in ${filenumbers[@]}
|
|---|
| 178 | do
|
|---|
| 179 | printprocesslog "INFO processing file number "$runnumber"_"`printf %03d $filenum`
|
|---|
| 180 | echo `date`": processing file number "$runnumber"_"`printf %03d $filenum` >> $logfile 2>&1
|
|---|
| 181 | echo `date`": processing file number "$runnumber"_"`printf %03d $filenum`
|
|---|
| 182 |
|
|---|
| 183 | # get information from rawfile
|
|---|
| 184 | rawfile=`ls $rawdir/$runnumber"_"\`printf %03d $filenum\`.fits*`
|
|---|
| 185 | if ! [ -e $rawfile ]
|
|---|
| 186 | then
|
|---|
| 187 | printprocesslog "ERROR: "$rawfile" not found."
|
|---|
| 188 | continue
|
|---|
| 189 | fi
|
|---|
| 190 |
|
|---|
| 191 | #runtype=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep RUNTYPE | grep -E -o "['][a-z-]+[']" | sed -e "s/'//g"`
|
|---|
| 192 | #mjdrefraw=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'MJDREF' | grep -E -o '[0-9]{5}'`
|
|---|
| 193 | tstarti=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'TSTARTI' | grep -E -o '[0-9]{5}'`
|
|---|
| 194 | tstartf=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'TSTARTF' | grep -E -o '0[.][0-9]+'`
|
|---|
| 195 | tstopi=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'TSTOPI' | grep -E -o '[0-9]{5}'`
|
|---|
| 196 | tstopf=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'TSTOPF' | grep -E -o '0[.][0-9]+'`
|
|---|
| 197 | if [ "$tstarti" == "" ] || [ "$tstopi" == "" ] || [ "$tstartf" == "" ] || [ "$tstopf" == "" ]
|
|---|
| 198 | then
|
|---|
| 199 | printprocesslog "WARN: "$rawfile": one of the following keywords is empty or 0: TSTARTI TSTARTF TSTOPI TSTOPF "
|
|---|
| 200 | continue
|
|---|
| 201 | fi
|
|---|
| 202 | echo $runtype
|
|---|
| 203 | # assuming that at least TSTARTI and TSTOPI are consistent
|
|---|
| 204 | #echo $rawfile
|
|---|
| 205 | #echo $tstarti
|
|---|
| 206 | #echo $tstopi
|
|---|
| 207 | #echo $tstartf
|
|---|
| 208 | #echo $tstopf
|
|---|
| 209 | if [ $tstarti -gt 30000 ]
|
|---|
| 210 | then
|
|---|
| 211 | tstart=`echo " $tstarti + $tstartf - 40587 " | bc -l`
|
|---|
| 212 | tstart2=`echo " $tstarti + $tstartf - 40587 - 0.00011574 " | bc -l` # 10 sec
|
|---|
| 213 | #tstart2=`echo " $tstarti + $tstartf - 40587 - 0.000023148 " | bc -l` # 2 sec
|
|---|
| 214 | tstop=`echo " $tstopi + $tstopf - 40587 " | bc -l`
|
|---|
| 215 | else
|
|---|
| 216 | tstart=`echo " $tstarti + $tstartf " | bc -l`
|
|---|
| 217 | tstart2=`echo " $tstarti + $tstartf - 0.00011574 " | bc -l` # 10 sec
|
|---|
| 218 | #tstart2=`echo " $tstarti + $tstartf - 0.000023148 " | bc -l` # 2 sec
|
|---|
| 219 | tstop=`echo " $tstopi + $tstopf " | bc -l`
|
|---|
| 220 | fi
|
|---|
| 221 | #echo $tstart
|
|---|
| 222 | #echo $tstop
|
|---|
| 223 | #if [ $runnumber -eq 20111123 ]
|
|---|
| 224 | #then
|
|---|
| 225 | # # add mjdref for days were aux files were inconsistent
|
|---|
| 226 | # tstart=`echo " $tstart + $mjdref " | bc -l`
|
|---|
| 227 | # tstart2=`echo " $tstart2 + $mjdref " | bc -l`
|
|---|
| 228 | # tstop=`echo " $tstop + $mjdref " | bc -l`
|
|---|
| 229 | #fi
|
|---|
| 230 |
|
|---|
| 231 | # get information from source_pos file
|
|---|
| 232 | if [ -e $sourceposfile ]
|
|---|
| 233 | then
|
|---|
| 234 | sourcename=`$factpath/fitsdump ${sourceposfile} -c Time -c Name --filter='[1]<'${tstop}' && [1]>'${sourceposfiletstart} 2>/dev/null | tail -1 2>&1 | grep -o -E "['][a-zA-Z0-9\ \.\+\-]+[']" | sed -e "s/'//g"`
|
|---|
| 235 | if [ "$sourcename" == "" ]
|
|---|
| 236 | then
|
|---|
| 237 | printprocesslog "INFO couldn't get sourcename ("$sourcename") from "$sourceposfile" for "$runnumber"_"$filenum
|
|---|
| 238 | else
|
|---|
| 239 | query="SELECT fSourceKey FROM Source WHERE fSourceName='"$sourcename"'"
|
|---|
| 240 | sourcekey=`sendquery`
|
|---|
| 241 | if [ "$sourcename" == "" ]
|
|---|
| 242 | then
|
|---|
| 243 | printprocesslog "WARN couldn't get sourcekey for source "$sourcename" from DB for "$runnumber"_"$filenum
|
|---|
| 244 | fi
|
|---|
| 245 | fi
|
|---|
| 246 | fi
|
|---|
| 247 | if [ "$doupdate" == "force" ]
|
|---|
| 248 | then
|
|---|
| 249 | # set runtype to 'unknown', if no runtype could be retrieved from file
|
|---|
| 250 | if [ "$runtype" == "" ]
|
|---|
| 251 | then
|
|---|
| 252 | runtype="n/a"
|
|---|
| 253 | fi
|
|---|
| 254 | # on 15.11.2011 the runtypes had different names
|
|---|
| 255 | if [ "$date" == "2011/11/15" ]
|
|---|
| 256 | then
|
|---|
| 257 | if [ "$runtype" == "drs-calib" ]
|
|---|
| 258 | then
|
|---|
| 259 | runtype="drs-gain"
|
|---|
| 260 | fi
|
|---|
| 261 | if [ "$runtype" == "drs-time-calib" ]
|
|---|
| 262 | then
|
|---|
| 263 | runtype="drs-time"
|
|---|
| 264 | fi
|
|---|
| 265 | if [ "$runtype" == "pedestal" ]
|
|---|
| 266 | then
|
|---|
| 267 | runtype="drs-pedestal"
|
|---|
| 268 | fi
|
|---|
| 269 | if [ "$runtype" == "light-pulser" ]
|
|---|
| 270 | then
|
|---|
| 271 | runtype="light-pulser-ext"
|
|---|
| 272 | fi
|
|---|
| 273 | if [ "$runtype" == "pedestal-on" ]
|
|---|
| 274 | then
|
|---|
| 275 | runtype="pedestal"
|
|---|
| 276 | fi
|
|---|
| 277 | fi
|
|---|
| 278 | # get runtype
|
|---|
| 279 | query="SELECT fRunTypeKEY FROM RunType WHERE fRunTypeName='"$runtype"'"
|
|---|
| 280 | result2=( `sendquery` )
|
|---|
| 281 | if [ ${#result2} -eq 0 ]
|
|---|
| 282 | then
|
|---|
| 283 | printprocesslog "ERROR "$numberfromname": Could not query fRunTypeKey for runtype "$runtype" ."
|
|---|
| 284 | continue
|
|---|
| 285 | fi
|
|---|
| 286 | # in newest data start time is in DATE-OBS
|
|---|
| 287 | # in older data start time is in TSTART
|
|---|
| 288 | # in the beginning TSTART was empty
|
|---|
| 289 | #runstart=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep DATE-OBS | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 290 | runstart=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep DATE-OBS | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 291 | #runstart2=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep TSTART | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 292 | runstart2=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep TSTART | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 293 | if [ "$runstart" == "" ]
|
|---|
| 294 | then
|
|---|
| 295 | if [ "$runstart2" == "" ]
|
|---|
| 296 | then
|
|---|
| 297 | #runstart=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep DATE | grep -v 'DATE-' | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 298 | runstart=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep DATE | grep -v 'DATE-' | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 299 | else
|
|---|
| 300 | runstart=$runstart2
|
|---|
| 301 | fi
|
|---|
| 302 | fi
|
|---|
| 303 | # in newest data start time is in DATE-END
|
|---|
| 304 | # in older data start time is in TSTOP
|
|---|
| 305 | # in the beginning TSTOP was empty
|
|---|
| 306 | #runstop=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep DATE-END | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 307 | runstop=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep DATE-END | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 308 | #runstop2=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep TSTOP | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 309 | runstop2=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep TSTOP | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9]T[0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{6}'`
|
|---|
| 310 | if [ "$runstop" == "" ]
|
|---|
| 311 | then
|
|---|
| 312 | if [ "$runstop2" == "" ]
|
|---|
| 313 | then
|
|---|
| 314 | runstop=`stat $rawfile 2>/dev/null | grep Modify | grep -E -o '20[1-9][0-9][\-][01][0-9][\-][0-3][0-9][ ][0-2][0-9]:[0-6][0-9]:[0-6][0-9][.][0-9]{9}'`
|
|---|
| 315 | else
|
|---|
| 316 | runstop=$runstop2
|
|---|
| 317 | fi
|
|---|
| 318 | fi
|
|---|
| 319 | echo $runstart $runstop
|
|---|
| 320 | #numevents=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep Events | grep -E -o '[0-9]+'`
|
|---|
| 321 | numevents=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep Events | grep -E -o '[0-9]+'`
|
|---|
| 322 | #roi=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep NROI | grep -v NROITM | grep -E -o '[0-9]{1,4}'`
|
|---|
| 323 | roi=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep NROI | grep -v NROITM | grep -E -o '[0-9]{1,4}'`
|
|---|
| 324 | #roitm=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep NROITM | grep -E -o '[0-9]{1,4}'`
|
|---|
| 325 | roitm=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep NROITM | grep -E -o '[0-9]{1,4}'`
|
|---|
| 326 | #numphys=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRG ' | grep -E -o '[0-9]+'`
|
|---|
| 327 | numphys=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRG ' | grep -E -o '[0-9]+'`
|
|---|
| 328 | #numext1=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGEXT1' | grep -E -o '[ ][0-9]+[ ]' | sed -e 's/\ //g'`
|
|---|
| 329 | numext1=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGEXT1' | grep -E -o '[ ][0-9]+[ ]' | sed -e 's/\ //g'`
|
|---|
| 330 | #numext2=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGEXT2' | grep -E -o '[ ][0-9]+[ ]' | sed -e 's/\ //g'`
|
|---|
| 331 | numext2=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGEXT2' | grep -E -o '[ ][0-9]+[ ]' | sed -e 's/\ //g'`
|
|---|
| 332 | #numelp=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGLPE' | grep -E -o '[0-9]+'`
|
|---|
| 333 | numelp=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGLPE' | grep -E -o '[0-9]+'`
|
|---|
| 334 | #numilp=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGLPI' | grep -E -o '[0-9]+'`
|
|---|
| 335 | numilp=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGLPI' | grep -E -o '[0-9]+'`
|
|---|
| 336 | #numoth=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGMISC' | grep -E -o '[0-9]+'`
|
|---|
| 337 | numoth=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGMISC' | grep -E -o '[0-9]+'`
|
|---|
| 338 | #numped=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGPED' | grep -E -o '[0-9]+'`
|
|---|
| 339 | numped=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGPED' | grep -E -o '[0-9]+'`
|
|---|
| 340 | #numtime=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'NTRGTIM' | grep -E -o '[0-9]+'`
|
|---|
| 341 | numtime=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'NTRGTIM' | grep -E -o '[0-9]+'`
|
|---|
| 342 | #compiled=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'COMPILED' | grep -E -o "['][a-zA-Z]+[ ][ 12][0-9][ ]20[0-9][0-9][ ][0-2][0-9]:[0-5][0-9]:[0-5][0-9][']" | sed -e "s/'//g"`
|
|---|
| 343 | compiled=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'COMPILED' | grep -E -o "['][a-zA-Z]+[ ][ 12][0-9][ ]20[0-9][0-9][ ][0-2][0-9]:[0-5][0-9]:[0-5][0-9][']" | sed -e "s/'//g"`
|
|---|
| 344 | if ! [ "$compiled" == "" ]
|
|---|
| 345 | then
|
|---|
| 346 | compiletime=`date +'%F %H:%M:%S' --date="${compiled}" `
|
|---|
| 347 | else
|
|---|
| 348 | compiletime=
|
|---|
| 349 | fi
|
|---|
| 350 | #revnum=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep 'REVISION' | grep -E -o "['][0-9]+[:]?[0-9]*[MSP]*[']" | sed -e "s/'//g"`
|
|---|
| 351 | revnum=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep 'REVISION' | grep -E -o "['][0-9]+[:]?[0-9]*[MSP]*[']" | sed -e "s/'//g"`
|
|---|
| 352 | # get checksums from header
|
|---|
| 353 | #checksum=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep CHECKSUM | grep -E -o '[a-zA-Z0-9]{16}'`
|
|---|
| 354 | checksum=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep CHECKSUM | grep -E -o '[a-zA-Z0-9]{16}'`
|
|---|
| 355 | if [ "$checksum" == "" ]
|
|---|
| 356 | then
|
|---|
| 357 | printprocesslog "WARN checksum for file "$rawfile" is empty."
|
|---|
| 358 | fi
|
|---|
| 359 | #datasum=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep DATASUM | grep -E -o '[0-9]{1,10}'`
|
|---|
| 360 | datasum=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep DATASUM | grep -E -o '[0-9]{1,10}'`
|
|---|
| 361 | if [ "$datasum" == "" ]
|
|---|
| 362 | then
|
|---|
| 363 | printprocesslog "WARN datasum for file "$rawfile" is empty."
|
|---|
| 364 | fi
|
|---|
| 365 | # check if this run has drs file
|
|---|
| 366 | # in case file is available, get STEP from header
|
|---|
| 367 | # in the very beginning only drs-files were existing
|
|---|
| 368 | # in the beginning the keywords DRSCALIB and STEP were not existing
|
|---|
| 369 | drsfile=`echo $rawfile | sed -e 's/fits/drs.fits/'`
|
|---|
| 370 | numdrsfiles=`ls $drsfile 2>/dev/null | wc -l`
|
|---|
| 371 | #drscalib=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep DRSCALIB | grep -E -o "['][TF][']" | sed -e "s/'//g"`
|
|---|
| 372 | drscalib=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep DRSCALIB | grep -E -o "[\ ][TF][\ ]" | sed -e "s/\ //g"`
|
|---|
| 373 | if [ "$drscalib" == "T" ]
|
|---|
| 374 | then
|
|---|
| 375 | #step=`$factpath/fitsdump -h -t Events $rawfile 2>/dev/null | grep DRSSTEP | grep -E -o "['][012][']" | sed -e "s/'//g"`
|
|---|
| 376 | step=`$factpath/fitsdump -h $rawfile 2>/dev/null | grep DRSSTEP | grep -E -o "[\ ][012][\ ]" | sed -e "s/\ //g"`
|
|---|
| 377 | #stepfromdrs=`$factpath/fitsdump -h -t Events $drsfile 2>/dev/null | grep STEP | grep -E -o "['][012][']" | sed -e "s/'//g"`
|
|---|
| 378 | stepfromdrs=`$factpath/fitsdump -h $drsfile 2>/dev/null | grep STEP | grep -E -o "[\ ][012][\ ]?" | sed -e "s/\ //g"`
|
|---|
| 379 | if [ "$stepfromdrs" != "$step" ]
|
|---|
| 380 | then
|
|---|
| 381 | printprocesslog "ERROR for file "$rawfile" step from drsfile ("$stepfromdrs") and from file ("$step") do not agree."
|
|---|
| 382 | if [ "$stepfromdrsfile" != "" ] && [ "$step" == "" ]
|
|---|
| 383 | then
|
|---|
| 384 | step=$stepfromdrsfile
|
|---|
| 385 | printprocesslog "WARN setting drsstep from drsfile ("$stepfromdrs") although value differs from the one in file "$rawfile"."
|
|---|
| 386 | fi
|
|---|
| 387 | fi
|
|---|
| 388 | if ! [ $numdrsfiles -eq 1 ]
|
|---|
| 389 | then
|
|---|
| 390 | printprocesslog "ERROR for file "$rawfile" number of drsfiles ("$numdrsfiles") and information from header ("$drscalib") don't agree."
|
|---|
| 391 | fi
|
|---|
| 392 | if [ "$step" = "" ]
|
|---|
| 393 | then
|
|---|
| 394 | printprocesslog "ERROR file "$rawfile" has drsfiles ("$numdrsfiles"), but step ("$step") is empty."
|
|---|
| 395 | fi
|
|---|
| 396 | else
|
|---|
| 397 | if ! [ "$drscalib" == "F" ]
|
|---|
| 398 | then
|
|---|
| 399 | printprocesslog "WARN for file "$rawfile" DRSCALIB is neither T nor F."
|
|---|
| 400 | fi
|
|---|
| 401 | fi
|
|---|
| 402 | fi
|
|---|
| 403 |
|
|---|
| 404 | # build query to update runinfo in DB
|
|---|
| 405 | query="UPDATE RunInfo SET "
|
|---|
| 406 |
|
|---|
| 407 | # fill source key only if available
|
|---|
| 408 | if ! [ "$sourcekey" = "" ]
|
|---|
| 409 | then
|
|---|
| 410 | query=$query" fSourceKey="$sourcekey", "
|
|---|
| 411 | else
|
|---|
| 412 | query=$query" fSourceKey=NULL, "
|
|---|
| 413 | fi
|
|---|
| 414 |
|
|---|
| 415 | # get information from tracking
|
|---|
| 416 | if [ -e $trackingfile ]
|
|---|
| 417 | then
|
|---|
| 418 | # get statistics
|
|---|
| 419 | trackingstats=`$factpath/fitsdump $trackingfile -s -c Time -c Ra -c Dec -c Zd -c Az --filter='[1]<'${tstop}' && [1]>'${tstart} 2>/dev/null`
|
|---|
| 420 | # RA
|
|---|
| 421 | evaluatestatistics "Ra" $trackingstats
|
|---|
| 422 | #echo $min"_"$max"_"$
|
|---|
| 423 | if [ "$evaluation" != "" ]
|
|---|
| 424 | then
|
|---|
| 425 | if [ "$min" == "$max" ]
|
|---|
| 426 | then
|
|---|
| 427 | query=$query" fRightAscension="$mean
|
|---|
| 428 | else
|
|---|
| 429 | query=$query" fRightAscension=NULL"
|
|---|
| 430 | printprocesslog "WARN for $rawfile RA changes within run (min: "$min", max: "$max")."
|
|---|
| 431 | fi
|
|---|
| 432 | # Declination
|
|---|
| 433 | evaluatestatistics "Dec" $trackingstats
|
|---|
| 434 | if [ "$decmin" == "$decmax" ]
|
|---|
| 435 | then
|
|---|
| 436 | query=$query", fDeclination="$mean
|
|---|
| 437 | else
|
|---|
| 438 | query=$query", fDeclination=NULL"
|
|---|
| 439 | printprocesslog "WARN for $rawfile declination changes within run (min: "$min", max: "$max")."
|
|---|
| 440 | fi
|
|---|
| 441 | else
|
|---|
| 442 | query=$query" fRightAscension=NULL"
|
|---|
| 443 | query=$query", fDeclination=NULL"
|
|---|
| 444 | fi
|
|---|
| 445 | # Zd
|
|---|
| 446 | evaluatestatistics "Zd" $trackingstats
|
|---|
| 447 | if [ "$evaluation" != "" ]
|
|---|
| 448 | then
|
|---|
| 449 | query=$query", fZenithDistanceMin="$min
|
|---|
| 450 | query=$query", fZenithDistanceMean="$mean
|
|---|
| 451 | query=$query", fZenithDistanceMax="$max
|
|---|
| 452 | else
|
|---|
| 453 | query=$query", fZenithDistanceMin=NULL"
|
|---|
| 454 | query=$query", fZenithDistanceMean=NULL"
|
|---|
| 455 | query=$query", fZenithDistanceMax=NULL"
|
|---|
| 456 | fi
|
|---|
| 457 | # Az
|
|---|
| 458 | evaluatestatistics "Az" $trackingstats
|
|---|
| 459 | if [ "$evaluation" != "" ]
|
|---|
| 460 | then
|
|---|
| 461 | query=$query", fAzimuthMin="$min
|
|---|
| 462 | query=$query", fAzimuthMean="$mean
|
|---|
| 463 | query=$query", fAzimuthMax="$max
|
|---|
| 464 | else
|
|---|
| 465 | query=$query", fAzimuthMin=NULL"
|
|---|
| 466 | query=$query", fAzimuthMean=NULL"
|
|---|
| 467 | query=$query", fAzimuthMax=NULL"
|
|---|
| 468 | fi
|
|---|
| 469 | else
|
|---|
| 470 | query=$query" fRightAscension=NULL"
|
|---|
| 471 | query=$query", fDeclination=NULL"
|
|---|
| 472 | query=$query", fZenithDistanceMin=NULL"
|
|---|
| 473 | query=$query", fZenithDistanceMean=NULL"
|
|---|
| 474 | query=$query", fZenithDistanceMax=NULL"
|
|---|
| 475 | query=$query", fAzimuthMin=NULL"
|
|---|
| 476 | query=$query", fAzimuthMean=NULL"
|
|---|
| 477 | query=$query", fAzimuthMax=NULL"
|
|---|
| 478 | fi
|
|---|
| 479 |
|
|---|
| 480 | # get information from trigger
|
|---|
| 481 | if [ -e $triggerratefile ]
|
|---|
| 482 | then
|
|---|
| 483 | # get statistics
|
|---|
| 484 | triggerstats=`$factpath/fitsdump $triggerratefile -s -c Time -c TriggerRate --filter='[1]<'${tstop}' && [1]>'${tstart} 2>/dev/null`
|
|---|
| 485 | evaluatestatistics "TriggerRate" $triggerstats
|
|---|
| 486 | if [ "$evaluation" != "" ]
|
|---|
| 487 | then
|
|---|
| 488 | query=$query", fTriggerRateMedian="$med
|
|---|
| 489 | else
|
|---|
| 490 | query=$query", fTriggerRateMedian=NULL"
|
|---|
| 491 | fi
|
|---|
| 492 | else
|
|---|
| 493 | query=$query", fTriggerRateMedian=NULL"
|
|---|
| 494 | fi
|
|---|
| 495 |
|
|---|
| 496 | # get information from thresholds
|
|---|
| 497 | if [ -e $thresholdfile ]
|
|---|
| 498 | then
|
|---|
| 499 | # get statistics
|
|---|
| 500 | thresholdstats=`$factpath/fitsdump $thresholdfile -s -c Time -c PatchThresh --filter='[1]<'${tstop}' && [1]>'${tstart} 2>/dev/null`
|
|---|
| 501 | evaluatestatistics "PatchThresh" $thresholdstats
|
|---|
| 502 | if [ "$evaluation" = "" ]
|
|---|
| 503 | then
|
|---|
| 504 | thresholdstats=`$factpath/fitsdump $thresholdfile -s -c Time -c PatchThresh --filter='[1]<'${tstop}' && [1]>'${tstart2} 2>/dev/null`
|
|---|
| 505 | #echo "$factpath/fitsdump $thresholdfile -s -c Time -c PatchThresh --filter='[1]<'${tstop}' && [1]>'${tstart2} 2>/dev/null"
|
|---|
| 506 | evaluatestatistics "PatchThresh" $thresholdstats
|
|---|
| 507 | fi
|
|---|
| 508 | if [ "$evaluation" != "" ]
|
|---|
| 509 | then
|
|---|
| 510 | query=$query", fThresholdMedian="$med
|
|---|
| 511 | else
|
|---|
| 512 | query=$query", fThresholdMedian=NULL"
|
|---|
| 513 | fi
|
|---|
| 514 | else
|
|---|
| 515 | query=$query", fThresholdMedian=NULL"
|
|---|
| 516 | fi
|
|---|
| 517 |
|
|---|
| 518 | # get information from bias: U
|
|---|
| 519 | if [ -e $biasvoltagefile ]
|
|---|
| 520 | then
|
|---|
| 521 | if [ $runnumber -gt 20120324 ]
|
|---|
| 522 | then
|
|---|
| 523 | biasstats=`$factpath/fitsdump $biasvoltagefile -s -c Time -c Uout --filter='[1]<'${tstop}' && [1]>'${tstart} 2>/dev/null`
|
|---|
| 524 | evaluatestatistics "Uout" $biasstats
|
|---|
| 525 | if [ "$evaluation" = "" ]
|
|---|
| 526 | then
|
|---|
| 527 | biasstats=`$factpath/fitsdump $biasvoltagefile -s -c Time -c Uout --filter='[1]<'${tstop}' && [1]>'${tstart2} 2>/dev/null`
|
|---|
| 528 | evaluatestatistics "Uout" $biasstats
|
|---|
| 529 | fi
|
|---|
| 530 | else
|
|---|
| 531 | biasstats=`$factpath/fitsdump $biasvoltagefile -s -c Time -c U --filter='[1]<'${tstop}' && [1]>'${tstart} 2>/dev/null`
|
|---|
| 532 | evaluatestatistics "U" $biasstats
|
|---|
| 533 | if [ "$evaluation" = "" ]
|
|---|
| 534 | then
|
|---|
| 535 | biasstats=`$factpath/fitsdump $biasvoltagefile -s -c Time -c U --filter='[1]<'${tstop}' && [1]>'${tstart2} 2>/dev/null`
|
|---|
| 536 | evaluatestatistics "U" $biasstats
|
|---|
| 537 | fi
|
|---|
| 538 | fi
|
|---|
| 539 | if [ "$evaluation" != "" ]
|
|---|
| 540 | then
|
|---|
| 541 | query=$query", fBiasVoltageMedian="$med
|
|---|
| 542 | else
|
|---|
| 543 | query=$query", fBiasVoltageMedian=NULL"
|
|---|
| 544 | fi
|
|---|
| 545 | else
|
|---|
| 546 | query=$query", fBiasVoltageMedian=NULL"
|
|---|
| 547 | fi
|
|---|
| 548 | if [ "$doupdate" == "force" ]
|
|---|
| 549 | then
|
|---|
| 550 | query=$query", fRunStart='"$runstart"', fRunStop='"$runstop"'"
|
|---|
| 551 | query=$query", fRunTypeKey="${result2[0]}
|
|---|
| 552 | if [ "$numevents" != "" ]
|
|---|
| 553 | then
|
|---|
| 554 | query=$query", fNumEvents="$numevents
|
|---|
| 555 | fi
|
|---|
| 556 | if [ "$roi" != "" ]
|
|---|
| 557 | then
|
|---|
| 558 | query=$query", fROI="$roi
|
|---|
| 559 | fi
|
|---|
| 560 | if [ "$roitm" != "" ]
|
|---|
| 561 | then
|
|---|
| 562 | query=$query", fROITimeMarker="$roitm
|
|---|
| 563 | fi
|
|---|
| 564 | if [ "$numphys" != "" ]
|
|---|
| 565 | then
|
|---|
| 566 | query=$query", fNumPhysicsTrigger="$numphys
|
|---|
| 567 | fi
|
|---|
| 568 | if [ "$numext1" != "" ]
|
|---|
| 569 | then
|
|---|
| 570 | query=$query", fNumExt1Trigger="$numext1
|
|---|
| 571 | fi
|
|---|
| 572 | if [ "$numext2" != "" ]
|
|---|
| 573 | then
|
|---|
| 574 | query=$query", fNumExt2Trigger="$numext2
|
|---|
| 575 | fi
|
|---|
| 576 | if [ "$numelp" != "" ]
|
|---|
| 577 | then
|
|---|
| 578 | query=$query", fNumELPTrigger="$numelp
|
|---|
| 579 | fi
|
|---|
| 580 | if [ "$numilp" != "" ]
|
|---|
| 581 | then
|
|---|
| 582 | query=$query", fNumILPTrigger="$numilp
|
|---|
| 583 | fi
|
|---|
| 584 | if [ "$numped" != "" ]
|
|---|
| 585 | then
|
|---|
| 586 | query=$query", fNumPedestalTrigger="$numped
|
|---|
| 587 | fi
|
|---|
| 588 | if [ "$numtime" != "" ]
|
|---|
| 589 | then
|
|---|
| 590 | query=$query", fNumTimeTrigger="$numtime
|
|---|
| 591 | fi
|
|---|
| 592 | if [ "$numoth" != "" ]
|
|---|
| 593 | then
|
|---|
| 594 | query=$query", fNumOtherTrigger="$numoth
|
|---|
| 595 | fi
|
|---|
| 596 | if [ "$checksum" != "" ]
|
|---|
| 597 | then
|
|---|
| 598 | query=$query", fCheckSum='"$checksum"'"
|
|---|
| 599 | fi
|
|---|
| 600 | if [ "$datasum" != "" ]
|
|---|
| 601 | then
|
|---|
| 602 | query=$query", fDataSum='"$datasum"'"
|
|---|
| 603 | fi
|
|---|
| 604 | if [ "$numdrsfiles" != "" ]
|
|---|
| 605 | then
|
|---|
| 606 | query=$query", fHasDrsFile="$numdrsfiles
|
|---|
| 607 | fi
|
|---|
| 608 | if [ "$step" != "" ]
|
|---|
| 609 | then
|
|---|
| 610 | query=$query", fDrsStep="$step
|
|---|
| 611 | fi
|
|---|
| 612 | if [ "$compiletime" != "" ]
|
|---|
| 613 | then
|
|---|
| 614 | query=$query", fCompileTime='"$compiletime"'"
|
|---|
| 615 | fi
|
|---|
| 616 | if [ "$revnum" != "" ]
|
|---|
| 617 | then
|
|---|
| 618 | query=$query", fRevisionNumber='"$revnum"'"
|
|---|
| 619 | fi
|
|---|
| 620 | fi
|
|---|
| 621 |
|
|---|
| 622 |
|
|---|
| 623 | # add where condition
|
|---|
| 624 | query=$query" WHERE fNight="$runnumber" AND fRunID="$filenum
|
|---|
| 625 | echo $query
|
|---|
| 626 |
|
|---|
| 627 | # send query to DB
|
|---|
| 628 | sendquery >/dev/null
|
|---|
| 629 | done
|
|---|
| 630 | done
|
|---|
| 631 |
|
|---|
| 632 | finish
|
|---|
| 633 |
|
|---|
| 634 |
|
|---|
