| 1 | #!/bin/bash
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| 2 | #
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| 3 | source `dirname $0`/../Sourcefile.sh
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| 4 | printprocesslog "INFO starting $0"
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| 5 |
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| 6 | # get dates
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| 7 | if [ "$certaindate" != "" ]
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| 8 | then
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| 9 | checkstring=`echo $certaindate | grep -E -o '^20[0-9][0-9]\/[01][0-9]\/[0-3][0-9]$'`
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| 10 | if [ "$checkstring" = "" ]
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| 11 | then
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| 12 | echo "Please give the variable certaindate in the correct format (YYYY/MM/DD)"
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| 13 | finish
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| 14 | fi
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| 15 | getdates $certaindate
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| 16 | else
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| 17 | if [ "$1" = "" ]
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| 18 | then
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| 19 | # get all night
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| 20 | #getdates "all"
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| 21 | # get last 6 nights if hour between 7 and 19h, else only current night
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| 22 | getdates 6 7 19
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| 23 | else
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| 24 | getdates $1
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| 25 | fi
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| 26 | fi
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| 27 |
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| 28 |
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| 29 |
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| 30 | for date in ${dates[@]}
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| 31 | do
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| 32 | printprocesslog "INFO processing "$date
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| 33 | #echo "INFO processing "$date
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| 34 | night=`echo $date | sed -e 's/\///g'`
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| 35 |
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| 36 | numganymeds=0
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| 37 | # getting all image files for this night
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| 38 | printprocesslog "INFO get file list for night "$date
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| 39 | files=( `find $anapath/star/$date -type f -name '*_I.root' 2>/dev/null | sort` )
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| 40 | if [ ${#files[@]} -eq 0 ]
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| 41 | then
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| 42 | printprocesslog "INFO no image files available for night "$date
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| 43 | continue
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| 44 | fi
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| 45 |
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| 46 | for file in ${files[@]}
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| 47 | do
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| 48 | night=`basename $file | cut -d_ -f1`
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| 49 | run=`basename $file | cut -d_ -f2`
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| 50 | printprocesslog "INFO processing run "$run
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| 51 | # process only if merpp-log is available to make sure that star-file is complete
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| 52 | # at ISDC seq# != run# -> get seq#
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| 53 | if echo $resulttable1 | grep ISDC >/dev/null 2>&1
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| 54 | then
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| 55 | query="SELECT LPAD(fSequenceID, 3, 0) FROM RunInfo WHERE fNight="$night" AND fRunID="$run
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| 56 | seq=`sendquery`
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| 57 | merpplog=`dirname $file`"/"$night"_"$seq"-merpp.log"
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| 58 | else
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| 59 | merpplog=`echo $file | sed -e 's/_I.root/-merpp.log/'`
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| 60 | fi
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| 61 | # check if merpp is finished
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| 62 | stillrunning=`find $merpplog -mmin -1 2>/dev/null`
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| 63 | if ! [ -e $merpplog ] || [ "$stillrunning" != "" ]
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| 64 | then
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| 65 | printprocesslog "INFO merpp still running - wait with file "$file
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| 66 | continue
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| 67 | fi
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| 68 | # process only if ganymedlogfiles is not yet there
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| 69 | logfile=`echo $file | sed -e 's/star/ganymed_run/' -e 's/_I[.]root/-ganymed[.]log/'`
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| 70 | if ! ls $logfile >/dev/null 2>&1
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| 71 | then
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| 72 | printprocesslog "DEBUG `dirname $0`/RunGanymed.sh "$file
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| 73 | if [ "$qlasge" = "yes" ]
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| 74 | then
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| 75 | printprocesslog "$sgepath/qsub -b y -q fact_short -v AUTOMATIONSETUP=$AUTOMATIONSETUP -v starfile=$file -e bla.txt -o bla.txt `dirname $0`/RunGanymed.sh"
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| 76 | $sgepath/qsub -b y -q fact_short -v AUTOMATIONSETUP=$AUTOMATIONSETUP -v star=$file -e bla.txt -o bla.txt `dirname $0`/RunGanymed.sh
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| 77 | else
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| 78 | printprocesslog " INFO `dirname $0`/RunGanymed.sh $file"
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| 79 | `dirname $0`/RunGanymed.sh $file
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| 80 | echo "ganymed for "$file
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| 81 | fi
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| 82 | numganymeds=`echo " $numganymeds + 1 " | bc -l`
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| 83 | fi
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| 84 | done
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| 85 | printprocesslog "INFO found "$numganymeds" ganymeds."
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| 86 | done
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| 87 |
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| 88 | finish
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| 89 |
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