source: fact/tools/pyscripts/pyfact/hist.py@ 12814

Last change on this file since 12814 was 12814, checked in by lusterma, 13 years ago
added hist.py : several histogram classes
File size: 6.1 KB
Line 
1#!/usr/bin/python
2#
3# Werner Lustermann
4# ETH Zurich
5#
6
7from ROOT import TH1F, TFile, TObjArray
8import numpy as np
9
10
11class histogramList( object ):
12 """ maintain a list of ROOT histograms
13 """
14 def __init__( self, name ):
15 """ set the name and create empty lists """
16 self.name = name # name of the list
17 self.list = [] # list of the histograms
18 self.dict = {} # dictionary of histograms
19 self.hList = TObjArray() # list of histograms for ROOT
20
21 self.book()
22
23 def __del__(self):
24 for h in self.list:
25 h.Delete()
26
27 def add( self, tag, h ):
28 self.list.append( h )
29 self.dict[tag] = h
30 self.hList.Add( h )
31
32 def h1d( self, name, title, Nbin, first, last, xtitle, ytitle ):
33
34 h = TH1F( name, title, Nbin, first, last );
35 h.GetXaxis().SetTitle( xtitle );
36 h.GetYaxis().SetTitle( ytitle );
37
38 # print 'self.add( ',name, ',', h, ' )'
39 self.add( name, h )
40
41 def book( self ):
42 """ booking of histograms
43
44 to be overwritten by the user with hist own definitions
45 """
46 # print 'histogramList::book'
47 pass
48
49
50class hist( object ):
51 """
52 Use numpy histogram function for histogram filling
53 Allows multiple calls for a single histogram
54 Create ROOT histo
55 """
56 def __init__( self, nbins, first, last, name = 'name', title = 'title',
57 xtitle = 'x', ytitle = 'y' ):
58
59 self.nbins = nbins
60 self.first = first
61 self.last = last
62 self.name = name
63 self.title = title
64 self.xtitle = xtitle
65 self.ytitle = ytitle
66 self.y = np.zeros( self.nbins ) # initialize all bins to ZERO
67
68 self.rh = 0
69
70 def fill( self, x ):
71 h, b = np.histogram( x, self.nbins, self.first, self.last,
72 new = True )
73 self.y += h
74
75 def zero( self ):
76 self.y[:] = 0.
77
78 def mkroot( self ):
79
80 if self.rh == 0:
81 self.rh = TH1F( self.name, self.title, self.nbins,
82 self.first, self.last )
83 self.rh.GetXaxis().SetTitle( xtitle );
84 self.rh.GetYaxis().SetTitle( ytitle );
85
86 for i in range( self.nbins ):
87 self.rh.SetBinContent( i+1, self.y[i] )
88
89
90class hist_array( object ):
91 """ array of 1d histograms data
92
93 y : np.array( nhist, nbins ), each row is representing a 1d histogram
94
95 all histograms have identical binning
96 histogramming of data vectors is done using np.histogram
97
98 creating of ROOT histograms is optional
99 """
100 def __init__( self, nhist, nbins, first, last, name = 'name',
101 title = 'title', xtitle = 'x', ytitle = 'y', root = True):
102 """ store histogram info and initialize data array
103 nhist : number of histograms
104 nbins : number of bins in a histogram
105 first : first bin
106 last : last bin
107 name : name of the histogram
108 title : title of the histogram
109 xtitle : label for the x axe
110 ytitle : label for the y axe
111
112 y : np.array( nhist, nbins ), each row is representing a 1d histogram
113 """
114 self.nhist = nhist
115 self.nbins = nbins
116 self.first = first
117 self.last = last
118 self.name = name
119 self.title = title
120 self.xtitle = xtitle
121 self.ytitle = ytitle
122
123 t = np.zeros( self.nhist * self.nbins ) # initialize array ZERO
124 self.y = t.reshape( nhist, nbins ) # shape array of histograms
125
126 # creating of ROOT histograms
127 if root == True:
128 self.bookRootHistos()
129 else:
130 self.list = 0
131
132 def __del__(self):
133 """ delete the ROOT histogram objects """
134
135 for h in self.list:
136 h.Delete()
137
138 def fill( self, hist, x ):
139 """ compute histogram for new data and add them to existing histogram
140
141 hist : index of the histogram { 0:nhist }
142 x : data vector
143 """
144
145 h, b = np.histogram( x, self.nbins, ( self.first, self.last ),
146 new = True )
147 self.y[ hist ] += h
148
149 def fillall( self, x ):
150 """ compute all histograms for now data array and add them to existing histograms
151
152 x : np.array( nhist, nbins ), data array in the shape of the histogram array
153 """
154 for hist in range( self.nhist ):
155 self.fill( hist, x[hist, :] )
156
157 def zero( self ):
158 """ set histogram array to ZERO
159 """
160 self.y.flat[:] = 0.
161
162 def bookRootHistos( self ):
163 """ book ROOT histograms equivalent to the histogram array
164
165 self:
166 list : list containing the ROOT histogram objects
167 hList : ROOT TObjArray containing all histograms
168 """
169 self.list = [ x for x in range( self.nhist ) ]
170 self.hList = TObjArray()
171
172 for hist in range( self.nhist ):
173
174 hname = self.name + ' ' + str( hist )
175 htitle = self.title + ' ' + str( hist )
176 self.list[hist] = TH1F( hname, htitle,
177 self.nbins, self.first, self.last )
178
179 self.list[hist].GetXaxis().SetTitle( self.xtitle )
180 self.list[hist].GetYaxis().SetTitle( self.ytitle )
181 self.hList.Add( self.list[hist] )
182
183 def SetBinContent( self ):
184 """ set the ROOT contents
185 """
186 if self.list == 0:
187 print 'no root histograms booked'
188 else:
189 for hist in range( self.nhist ):
190 for i in range( self.nbins ):
191 self.list[hist].SetBinContent( i+1, self.y[hist, i] )
192
193
194def SaveHistograms( histogramLists, fname = 'histo.root', opt = 'RECREATE' ):
195 """
196 Saves all histograms in all given histogram lists to a root file
197 Each histogram list is saved to a separate directory
198 """
199 rf = TFile( fname, opt)
200
201 for list in histogramLists:
202 rf.mkdir( list.name )
203 rf.cd( list.name )
204 list.hList.Write()
205
206 rf.Close()
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