#!/bin/bash # option whether to fill all row or only those where information is missing # $doupdate might be given as environment variable if [ "$doupdate" = "" ] then doupdate="yes" # update all entries (needed when new fields have been added) doupdate="no" # fill only entries which are not yet existing (default) fi source `dirname $0`/../Sourcefile.sh printprocesslog "INFO starting $0 with option doupdate="$doupdate logfile=$runlogpath"/FillAusCamHum-"$datetime".log" date >> $logfile # check if software is available if ! ls $factpath/fitsdump >/dev/null 2>&1 then printprocesslog "ERROR "$factpath"/fitsdump is not available." finish fi # get dates if [ "$certaindate" != "" ] then getdates $certaindate else # get all night #getdates "all" # get last 6 nights getdates 6 fi printprocesslog "INFO processing the following night(s): "${dates[@]} echo `date`": processing the following night(s): "${dates[@]} >> $logfile 2>&1 cd $mars # do filling of aux data for date in ${dates[@]} do auxdir=$auxdata/$date runnumber=`echo $date | sed -e 's/\///g'` if [ $runnumber -lt 20120328 ] then continue fi # get file numbers from DB # but only for not-corrupted files query="SELECT fRunID from RunInfo WHERE fNight="$runnumber" AND fFitsFileErrors=0 AND fRunTypeKey=1 " if [ "$doupdate" = "no" ] then query=$query" AND ISNULL(fNum27Sec) " fi printprocesslog "DEBUG get filenumbers from DB: QUERY: "$query filenumbers=( `sendquery $query` ) printprocesslog "INFO processing "${#filenumbers[@]}" files from date "$date echo "INFO processing "${#filenumbers[@]}" files from date "$date >> $logfile 2>&1 # proceed only if there are files available if [ ${#filenumbers} -eq 0 ] then printprocesslog "INFO No files found in the DB for night "$date continue fi # fill counter=0 for filenum in ${filenumbers[@]} do printprocesslog "INFO processing file number "$runnumber"_"`printf %03d $filenum` echo `date`": processing file number "$runnumber"_"`printf %03d $filenum` >> $logfile 2>&1 cfile=$datapath"/callisto/"$date"/"$runnumber"_"`printf %03d $filenum`"_C.root" if ! [ -e $cfile ] then printprocesslog "INFO "$cfile" does not yet exist" continue fi printprocesslog "INFO filling rates from " $cfile rates=( `root -q -b -l fact/processing/swtrig.C\("\"$cfile\""\) | grep "result" | grep -E -o '[0-9]+'` ) # build query to update runinfo in DB query="UPDATE RunInfo SET " if [ "${rates[0]}" == "" ] then query=$query"fNum27Sec=NULL, " query=$query"fNumThreshold50=NULL, " query=$query"fNumThreshold100=NULL, " query=$query"fNumThreshold200=NULL, " query=$query"fNumThreshold350=NULL, " query=$query"fNumThreshold500=NULL, " query=$query"fNumThreshold750=NULL, " query=$query"fNumThreshold1000=NULL, " query=$query"fNumThreshold1250=NULL, " query=$query"fNumThreshold2500=NULL, " query=$query"fNumThreshold5000=NULL, " query=$query"fNumThreshold10000=NULL, " query=$query"fNumThreshold20000=NULL" else query=$query"fNum27Sec="${rates[0]}", " query=$query"fNumThreshold50="${rates[1]}", " query=$query"fNumThreshold100="${rates[2]}", " query=$query"fNumThreshold200="${rates[3]}", " query=$query"fNumThreshold350="${rates[4]}", " query=$query"fNumThreshold500="${rates[5]}", " query=$query"fNumThreshold750="${rates[6]}", " query=$query"fNumThreshold1000="${rates[7]}", " query=$query"fNumThreshold1250="${rates[8]}", " query=$query"fNumThreshold2500="${rates[9]}", " query=$query"fNumThreshold5000="${rates[10]}", " query=$query"fNumThreshold10000="${rates[11]}", " query=$query"fNumThreshold20000="${rates[12]} fi # add where condition query=$query" WHERE fNight="$runnumber" AND fRunID="$filenum # send query to DB sendquery >/dev/null counter=`echo " $counter + 1 " | bc -l` done #echo "processed "$counter" files." done finish