source: trunk/DataCheck/QuickLook/Step2a.sh@ 15369

Last change on this file since 15369 was 15310, checked in by Daniela Dorner, 12 years ago
adapted names of scripts for automatic analysis
  • Property svn:executable set to *
File size: 4.4 KB
Line 
1#!/bin/bash
2#
3source `dirname $0`/../Sourcefile.sh
4printprocesslog "INFO starting $0"
5
6#root=/opt/root_svn/bin/thisroot.sh
7#source $root
8#factpath=/home/fact/FACT++.in-run-fad-loss
9
10#anapath=/loc_data/analysis
11
12if [ "$1" = "" ]
13then
14 # get date (before 18h there is no new data to be processed)
15 datepath=`date --date="-18HOUR" +%Y/%m/%d`
16else
17 datepath=$1
18fi
19printprocesslog "INFO processing "$datepath
20#echo "INFO processing "$datepath
21night=`echo $datepath | sed -e 's/\///g'`
22
23sources=( 1 2 5 7 )
24numganymeds=0
25
26for source in ${sources[@]}
27do
28 # doing first 5min datasets, i.e. one image file per dataset
29 min=5
30 # getting all image files for this source and night
31 printprocesslog "INFO get file list for source "$source
32 files=( `find /loc_data/analysis/$source/star/$datepath -type f -name '*_I.root' 2>/dev/null | sort` )
33 if [ ${#files[@]} -eq 0 ]
34 then
35 printprocesslog "INFO no image files available for source "$source" on "$datepath
36 continue
37 fi
38 # write data set file
39 dspath=$anapath/$source/datasets`printf %03d $min`min/$datepath
40 makedir $dspath
41 for (( i=1 ; i<=${#files[@]} ; i++ ))
42 do
43 dsfile=$dspath/dataset$i.txt
44 printprocesslog "INFO writing dataset file "$dsfile
45 # write dataset only if merpp-log is available to make sure that star-file is complete
46 merpplog=`echo ${files[$i-1]} | sed -e 's/_I.root/-merpp.log/'`
47 stillrunning=`find $merpplog -mmin -1 2>/dev/null`
48 if [ -e $merpplog ] && [ "$stillrunning" == "" ]
49 then
50 echo `dirname ${files[$i-1]}`" "`basename ${files[$i-1]}` > $dsfile
51 else
52 echo "merpp still running - wait with file "${files[$i-1]}
53 continue
54 fi
55 # process only if ganymedlogfiles is not yet there
56 logfile=`echo $dsfile | sed -e 's/datasets/ganymed/' -e 's/dataset//' -e 's/[.]txt/-ganymed[.]log/'`
57 if ! ls $logfile >/dev/null 2>&1
58 then
59 echo $logfile" "${files[$i-1]}
60 `dirname $0`/RunGanymed.sh $source $dsfile
61 numganymeds=`echo " $numganymeds + 1 " | bc -l`
62 fi
63 done
64
65 # get list of 5min-dataset-files as starting point
66 printprocesslog "INFO get list of dataset files for "$min"min"
67 files=( `find $dspath -type f -name 'dataset*.txt' | sort` )
68 minold=5
69 # loop over data set files
70 # copy always 2 in one new file for double observation time
71 while [ ${#files[@]} -gt 1 ]
72 do
73 # get double observation time and path for datasets
74 min=`echo " $minold + $minold " | bc -l `
75 dspathold=$dspath
76 dspath=$anapath"/"$source"/datasets"`printf %03d $min`"min/"$datepath
77 makedir $dspath
78 # loop over already existing data set files
79 for (( i=0 ; i<=${#files[@]} ; i++ ))
80 do
81 # number of 1st and 2nd old dataset file
82 num1=`echo " $i + $i + 1" | bc -l `
83 num2=`echo " $i + $i + 2 " | bc -l `
84 # number of new dataset file
85 dsnum=`echo " $i + 1 " | bc -l `
86 # continue only if 2 dataset files are left
87 if ! [ ${files[$num1]} ]
88 then
89 break
90 fi
91 ds1=$dspathold"/dataset"$num1".txt"
92 ds2=$dspathold"/dataset"$num2".txt"
93 dsfile=$dspath"/dataset"$dsnum".txt"
94 if ! [ -e $ds1 ] || ! [ -e $ds2 ]
95 then
96 echo $ds1" or "$ds2" is still missing -> continue."
97 continue
98 fi
99 # copy two old into one new dataset file
100 printprocesslog "INFO writing dataset "$dsfile
101 cat $ds1 > $dsfile
102 cat $ds2 >> $dsfile
103 # process only if ganymedlogfiles is not yet there
104 logfile=`echo $dsfile | sed -e 's/datasets/ganymed/' -e 's/dataset//' -e 's/[.]txt/-ganymed[.]log/'`
105 if ! ls $logfile >/dev/null 2>&1
106 then
107 echo $logfile
108 `dirname $0`/RunGanymed.sh $source $dsfile
109 numganymeds=`echo " $numganymeds + 1 " | bc -l`
110 fi
111 done
112 # get list of new dataset files
113 printprocesslog "INFO get list of dataset files for "$min"min"
114 files=( `find $dspath -type f -name 'dataset*.txt' | sort` )
115 minold=$min
116 done
117 if [ $numganymeds -gt 0 ]
118 then
119 if ! ps aux | grep Step2b | grep -v grep >/dev/null 2>&1
120 then
121 `dirname $0`/Step2b.sh &
122 fi
123 if ! ps aux | grep Step3 | grep -v grep >/dev/null 2>&1
124 then
125 `dirname $0`/Step3.sh min &
126 fi
127 numganymeds=0
128 fi
129done
130
131finish
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