| 1 | #!/bin/bash
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| 2 |
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| 3 | # ---------------------------------------------------------------- #
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| 4 | # README README README README README README README README README #
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| 5 | # ---------------------------------------------------------------- #
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| 6 | # #
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| 7 | # To use this script, you need #
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| 8 | # - a computer with access to the FACT database in La Palma #
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| 9 | # - a file with the password of a valid mysql-user #
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| 10 | # - to define the setup below for #
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| 11 | # a) the DB access #
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| 12 | # b) the data you want to have #
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| 13 | # #
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| 14 | # To define the setup, search for SETUP in this script and #
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| 15 | # read the details there #
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| 16 | # #
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| 17 | # Per data request, you get up to 3 files: #
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| 18 | # *_internal.dat #
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| 19 | # *_collaborators.dat #
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| 20 | # *_external.dat (only if binning is 20min or nightly) #
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| 21 | # #
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| 22 | # Please have in mind that this started as a tool for myself, then #
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| 23 | # others started using it. Also the script is not yet finalized. #
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| 24 | # In case you find problems and/or have a feature request, please #
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| 25 | # send and email to dorner@astro.uni-wuerzburg.de #
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| 26 | # #
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| 27 | # ---------------------------------------------------------------- #
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| 28 | # README README README README README README README README README #
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| 29 | # ---------------------------------------------------------------- #
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| 30 |
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| 31 |
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| 32 |
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| 33 |
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| 34 |
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| 35 | # ToDo (notes DD):
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| 36 | # ----------------
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| 37 | # - fix bug for timeunit=timestamp (min-binning)
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| 38 | # - add information on souce, binning, etc to data-file
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| 39 | # must-have
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| 40 | # - update function for zd/th-correction
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| 41 | # - update CU for QLA
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| 42 | # - add CU for ISDC analysis
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| 43 | # - add < 20121212 data for QLA
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| 44 | # - check crab flux
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| 45 | # nice-to-have
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| 46 | # - add E2dNdE
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| 47 | # - functionality to determine start time for seaon-binning
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| 48 | # - offer several predefined datachecks?
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| 49 |
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| 50 | #
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| 51 | # content of files (wish list):
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| 52 | # -----------------------------
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| 53 | # REMARK: keep order of columns to allow for reading with TGraph directly from file: X Y EX EY
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| 54 | #
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| 55 | # internal
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| 56 | # --------
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| 57 | # time: time, delta time, start, stop, ontime
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| 58 | # flux: excrate, excerr, corrate, corerr, CU CUerr, flux, fluxerr,
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| 59 | # other info on flux: signif, cu-factor, num exc, num sig, num bg
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| 60 | # other info: zd th R750cor R750ref
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| 61 | #
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| 62 | # external (allow only 20min and nightly binning)
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| 63 | # --------
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| 64 | # time: time, delta time, start, stop
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| 65 | # flux: excrate, excerr
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| 66 | #
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| 67 | # collaborators
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| 68 | # -------------
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| 69 | # time: time, delta time, start, stop, ontime
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| 70 | # flux: excrate, excerr, corrate, corerr, flux, flux-err, significance
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| 71 | #
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| 72 | # additional information to put:
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| 73 | # ------------------------------
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| 74 | # timestamp of creation
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| 75 | # query (for debugging / answering questions)
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| 76 | # policy (adapted for internal/collaborators/external) [define in files to be used also by Send_Data*.sh
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| 77 | #
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| 78 |
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| 79 |
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| 80 | function print_policy()
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| 81 | {
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| 82 | echo "#"
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| 83 | echo "# Data Usage Policy: "
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| 84 | if [ "$expert" == "no" ]
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| 85 | then
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| 86 | echo "# Using data from the FACT Quick Look Analysis, you agree to cite the FACT design"
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| 87 | echo "# paper and the quick look analysis website. "
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| 88 | echo "#"
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| 89 | echo "# References: "
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| 90 | echo "# FACT design paper: http://adsabs.harvard.edu/abs/2013JInst...8P6008A"
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| 91 | echo "# http://iopscience.iop.org/1748-0221/8/06/P06008 "
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| 92 | echo "# FACT Performance Paper: href='http://adsabs.harvard.edu/abs/2014JInst...9P0012B"
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| 93 | echo "# href='http://iopscience.iop.org/1748-0221/9/10/P10012"
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| 94 | echo "# FACT quick look analysis: https://fact-project.org/monitoring"
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| 95 | echo "# http://adsabs.harvard.edu/abs/2015arXiv150202582D"
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| 96 | echo "# If you intend to use data or information from this website, please let us know for reference."
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| 97 | else
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| 98 | echo "# As a member or associated member of the FACT Collaboration, you have access to internal information."
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| 99 | echo "# Any publication using FACT internal information has to have the full FACT author list."
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| 100 | fi
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| 101 | echo "#"
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| 102 | }
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| 103 |
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| 104 |
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| 105 |
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| 106 | function get_results()
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| 107 | {
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| 108 | # some query parts
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| 109 |
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| 110 | # some numbers for flux calculation
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| 111 | crabflux="3.37e-11"
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| 112 | fluxprec=13
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| 113 | crabflux="3.37"
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| 114 | fluxprec=2
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| 115 |
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| 116 | # some names and definitions needed several times below
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| 117 | # ontime
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| 118 | ontime1=" TIME_TO_SEC(TIMEDIFF(fRunStop,fRunStart))*fEffectiveOn "
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| 119 | ontime2=" fOnTimeAfterCuts "
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| 120 | ontimeif=" IF(ISNULL(fEffectiveOn), "$ontime2", "$ontime1") "
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| 121 | # zd and threshold
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| 122 | zenith="fZenithDistance"
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| 123 | thresh="IF(ISNULL(fThresholdMinSet),fThresholdMedian,fThresholdMinSet)"
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| 124 | # correction factor for excess rate (formula by TB)
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| 125 | correvts=" fNumExcEvts*(pow(cos("$zenith"Mean*PI()/180),3)+14.8/21.9*pow(sin(2*"$zenith"Mean*PI()/180),5))/((1-0.00124/1.21*("$thresh"-500)*("$thresh">=500))) "
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| 126 | # conversion to CU (determined by DD for QLA)
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| 127 | # https://www.fact-project.org/logbook/showthread.php?tid=4927
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| 128 | cufactor="CUQLA(fNight)" # missing: ISDC analysis
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| 129 | # some calculations
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| 130 | excerr="ExcErr(Sum(fNumSigEvts), SUM(fNumBgEvts))"
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| 131 | CU="SUM("$correvts"/"$cufactor")/SUM("$ontimeif")*3600"
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| 132 | CUerr=$excerr"/SUM("$ontimeif")*3600*SUM("$correvts"/"$cufactor")/SUM(fNumExcEvts)"
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| 133 | excerr2="ExcErr(SUM(o.sigevts),SUM(o.bgevts))"
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| 134 | CU2="SUM(o.corevts/o.cufactor)/SUM(o.ot)*3600"
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| 135 | CUerr2=$excerr2"/SUM(o.ot)*3600*SUM(o.corevts/o.cufactor)/(SUM(o.sigevts)-SUM(o.bgevts))"
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| 136 |
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| 137 | # columns to be selected
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| 138 | # for night-binning
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| 139 | ontime=" ROUND(SUM("$ontimeif")/60., 1) AS ontime"
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| 140 | excrate=" ROUND(SUM(fNumExcEvts)/SUM("$ontimeif")*3600, 1) AS excrate"
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| 141 | significance="ROUND(LiMa(Sum(fNumSigEvts), SUM(fNumBgEvts)), 1) AS significance"
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| 142 | numexc="Sum(fNumExcEvts) AS numexc"
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| 143 | numsig="Sum(fNumSigEvts) AS numsig"
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| 144 | numbg="Sum(fNumBgEvts) AS numbg"
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| 145 | excrateerr=" ROUND("$excerr"/SUM("$ontimeif")*3600, 1) AS excrateerr"
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| 146 | correxcrate=" ROUND(SUM("$correvts")/SUM("$ontimeif")*3600, 1) AS correxcrate"
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| 147 | correxcrateerr=" ROUND("$excerr"/SUM("$ontimeif")*3600*SUM("$correvts")/SUM(fNumExcEvts), 1) AS correxcrateerr"
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| 148 | cu=" ROUND("$CU", 2) AS cu"
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| 149 | cuerr=" ROUND("$CUerr", 2) AS cuerr"
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| 150 | flux="ROUND("$CU" * "$crabflux", 2) AS flux"
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| 151 | fluxerr="ROUND("$CUerr" * "$crabflux", 2) AS fluxerr"
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| 152 | # for minute binning
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| 153 | ontime2=" ROUND(SUM(o.ot)/60., 1) AS ontime"
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| 154 | excrate2=" ROUND((SUM(o.sigevts)-SUM(o.bgevts))/SUM(o.ot)*3600, 1) AS excrate"
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| 155 | significance2=" ROUND(LiMa(SUM(o.sigevts),SUM(o.bgevts)), 1) AS significance"
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| 156 | numexc2="Sum(o.sigevts-o.bgevts) AS numexc"
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| 157 | numsig2="Sum(o.sigevts) AS numsig"
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| 158 | numbg2="Sum(o.bgevts) AS numbg"
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| 159 | excrateerr2=" ROUND("$excerr2"/SUM(o.ot)*3600, 1) AS excrateerr"
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| 160 | correxcrate2=" ROUND(SUM(o.corevts)/SUM(o.ot)*3600, 1) AS correxcrate"
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| 161 | correxcrateerr2=" ROUND("$excerr2"/SUM(o.ot)*3600*SUM(o.corevts)/(SUM(o.sigevts)-SUM(o.bgevts)), 1) AS correxcrateerr"
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| 162 | cu2=" ROUND("$CU2", 2) AS cu"
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| 163 | cuerr2=" ROUND("$CUerr2", 2) AS cuerr"
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| 164 | flux2="ROUND("$CU2" * "$crabflux", "$fluxprec") AS flux"
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| 165 | fluxerr2="ROUND("$CUerr2" *"$crabflux", "$fluxprec") AS fluxerr"
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| 166 |
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| 167 | case $timeunit in
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| 168 | mjd) delta="(Mjd(MAX(fRunStop))-Mjd(MIN(fRunStart)))/2"
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| 169 | start=" Mjd(MIN(fRunStart)) AS start"
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| 170 | stop=" Mjd(MAX(fRunStop)) AS stop"
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| 171 | deltat=$delta" AS deltat"
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| 172 | time=" Mjd(MIN(fRunStart))+"$delta" AS time"
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| 173 | delta2="(Mjd(MAX(o.stop))-Mjd(MIN(o.start)))/2"
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| 174 | start2=" Mjd(MIN(o.start)) AS start"
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| 175 | stop2=" Mjd(MAX(o.stop)) AS stop"
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| 176 | deltat2=$delta2" AS deltat"
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| 177 | time2=" Mjd(MIN(o.start))+"$delta2" AS time"
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| 178 | ;;
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| 179 | unix) delta="(Unix_timestamp(CONVERT_TZ(MAX(fRunStop), '+00:00', 'SYSTEM')) - Unix_timestamp(CONVERT_TZ(MIN(fRunStart), '+00:00', 'SYSTEM')))/2"
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| 180 | start="Unix_timestamp(CONVERT_TZ(MIN(fRunStart), '+00:00', 'SYSTEM')) AS start"
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| 181 | stop="Unix_timestamp(CONVERT_TZ(MAX(fRunStop), '+00:00', 'SYSTEM')) AS stop"
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| 182 | deltat=$delta" AS deltat"
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| 183 | time=" Unix_timestamp(CONVERT_TZ(MIN(fRunStart), '+00:00', 'SYSTEM'))+"$delta" AS time"
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| 184 | delta2="(Unix_timestamp(CONVERT_TZ(MAX(o.stop), '+00:00', 'SYSTEM')) - Unix_timestamp(CONVERT_TZ(MIN(o.start), '+00:00', 'SYSTEM')))/2"
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| 185 | startstop2=" Unix_timestamp(CONVERT_TZ(MIN(o.start), '+00:00', 'SYSTEM')) AS start"
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| 186 | startstop2=$starstop2" Unix_timestamp(CONVERT_TZ(MAX(o.stop), '+00:00', 'SYSTEM')) AS stop"
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| 187 | deltat2=$delta2" AS deltat"
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| 188 | time2=" Unix_timestamp(CONVERT_TZ(MIN(o.start), '+00:00', 'SYSTEM'))+"$delta2" AS time"
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| 189 | ;;
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| 190 | *) delta="sec_to_time(time_to_sec(timediff(MAX(fRunStop), MIN(fRunStart)))/2)"
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| 191 | start=" MIN(fRunStart) AS start"
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| 192 | stop=" MAX(fRunStop) AS stop"
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| 193 | deltat=$delta" AS deltat"
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| 194 | time=" addtime(MIN(fRunStart), "$delta") AS time"
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| 195 | delta2="sec_to_time(time_to_sec(timediff(MAX(o.stop), MIN(o.start)))/2)"
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| 196 | start2=" MIN(o.start) AS start"
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| 197 | stop2=" MAX(o.stop) AS stop"
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| 198 | deltat2=$delta" AS deltat"
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| 199 | time2=" addtime(MIN(o.start), "$delta2") AS time"
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| 200 | ;;
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| 201 | esac
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| 202 |
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| 203 | # from and join of query
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| 204 | from=" FROM RunInfo LEFT JOIN "$table" USING (fNight, fRunID) "
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| 205 |
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| 206 | # data check based on artificial trigger rate
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| 207 | # details see https://www.fact-project.org/logbook/showthread.php?tid=5790
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| 208 | #dch=" AND fR750Cor/fR750Ref >0.93 "
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| 209 | dchstd=" AND fR750Cor/fR750Ref BETWEEN 0.93 AND 1.3 "
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| 210 |
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| 211 | # put together where-clause of query
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| 212 | # time range and source
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| 213 | where=" WHERE fSourceKey="$source" AND fNight BETWEEN "$nightmin" AND "$nightmax
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| 214 | where=$where" AND NOT ISNULL(fNumExcEvts) "
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| 215 | # some sanity checks
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| 216 | where=$where" AND fRunTypeKey=1 "
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| 217 | # zd cut
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| 218 | if [ "$zdmax" != "" ]
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| 219 | then
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| 220 | where=$where" AND fZenithDistanceMax < "$zdmax
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| 221 | fi
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| 222 | # th cut
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| 223 | if [ "$thmax" != "" ]
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| 224 | then
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| 225 | where=$where" AND "$thresh" < "$thmax
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| 226 | fi
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| 227 | # dust cut
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| 228 | if [ "$dust" != "" ]
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| 229 | then
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| 230 | where=$where" AND fTNGDust<"$dust
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| 231 | fi
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| 232 | # light condition cut
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| 233 | if [ "$light" == "no moon" ]
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| 234 | then
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| 235 | where=$where" AND fZenithDistanceMoon>90"
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| 236 | fi
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| 237 | if [ "$light" == "dark" ]
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| 238 | then
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| 239 | where=$where" AND fMoonZenithDistance>90 AND fSunZenithDistance>108 "
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| 240 | fi
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| 241 | querybase=$from$where
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| 242 |
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| 243 | if [ "$usedch" == "yes" ]
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| 244 | then
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| 245 | if [ "$dch" == "" ]
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| 246 | then
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| 247 | querydch=$dchstd
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| 248 | else
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| 249 | echo "you are using for datacheck: "$dch
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| 250 | querydch=$dch
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| 251 | fi
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| 252 | fi
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| 253 |
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| 254 |
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| 255 | if [ $bin -le 0 ]
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| 256 | then
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| 257 | num="#bin"
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| 258 | # first part of the query
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| 259 | querystart="SELECT "
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| 260 | if [ $bin -eq 0 ]
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| 261 | then
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| 262 | querystart=$querystart" fPeriod AS num, "
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| 263 | else
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| 264 | querystart=$querystart" FLOOR((Mjd(fRunStart)-Mjd("$nightmin")-0.5)/"`echo $bin | sed -e 's/-//'`".) AS num, "
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| 265 | fi
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| 266 | querystart=$querystart" "$time", "$start", "$stop", "
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| 267 |
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| 268 | # final part of the query
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| 269 | queryend=" GROUP BY num "
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| 270 | if [ "$ontimelimit" = "" ]
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| 271 | then
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| 272 | queryend=$queryend" HAVING SUM("$ontimeif")>1200 ORDER BY num " # 20 min
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| 273 | else
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| 274 | queryend=$queryend" HAVING SUM("$ontimeif")>"$ontimelimit" ORDER BY num "
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| 275 | fi
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| 276 |
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| 277 | # internal
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| 278 | queryint=$querystart
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| 279 | queryint=$queryint" "$excrate", "$correxcrate", "$cu", "$flux", "
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| 280 | queryint=$queryint" "$deltat", "$ontime", "
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| 281 | queryint=$queryint" "$excrateerr", "$correxcrateerr", "$cuerr", "$fluxerr", "
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| 282 | queryint=$queryint" "$significance", "
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| 283 | queryint=$queryint" MIN(fNight) AS nightmin, MAX(fNight) AS nightmax, "
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| 284 | queryint=$queryint" "$numexc", "$numsig", "$numbg", "
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| 285 | queryint=$queryint" MIN("$zenith"Min) AS zdmin, MAX("$zenith"Max) AS zdmax, "
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| 286 | queryint=$queryint" MIN("$thresh") AS thmin, MAX("$thresh") AS thmax, "
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| 287 | queryint=$queryint" ROUND(AVG("$cufactor"), 1) AS cufactor, ROUND(AVG(fR750Cor), 2) AS R750cor, ROUND(AVG(fR750Ref), 2) AS R750ref "
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| 288 | queryint=$queryint" "$querybase" "$querydch" "$queryend
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| 289 |
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| 290 | # for collaborators
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| 291 | querycol=$querystart
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| 292 | querycol=$querycol" "$excrate", "$correxcrate", "$cu", "$flux", "
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| 293 | querycol=$querycol" "$deltat", "$ontime", "
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| 294 | querycol=$querycol" "$excrateerr", "$correxcrateerr", "$cuerr", "$fluxerr", "
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| 295 | querycol=$querycol" "$significance
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| 296 | querycol=$querycol" "$querybase" "$querydch" "$queryend
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| 297 |
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| 298 | # external
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| 299 | # no datacheck applied for external files
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| 300 | queryext=$querystart" "$excrate", "$deltat", "$excrateerr" "$querybase" "$queryend
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| 301 |
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| 302 | else
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| 303 | num=
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| 304 | # first part of the query
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| 305 | querystart="SELECT "
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| 306 | querystart=$querystart" "$time2", "$start2", "$stop2", "
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| 307 |
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| 308 | # final part of the query
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| 309 | querybase=" FROM (SELECT fNight, fZenithDistanceMin AS zdmin, fZenithDistanceMax AS zdmax, "$thresh" AS th, "
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| 310 | querybase=$querybase" fR750Cor AS R750cor, fR750Ref AS R750ref, "$cufactor" AS cufactor, "
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| 311 | querybase=$querybase" @ot:="$ontimeif" AS ot, fRunStart AS start, fRunStop AS stop, "
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| 312 | querybase=$querybase" fNumSigEvts AS sigevts, fNumBgEvts AS bgevts, "$correvts" AS corevts, "
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| 313 | querybase=$querybase" IF (@night=fNight AND FLOOR((@os+@ot)/"$bin"./60.)<1, @bl, @bl := @bl + 1) AS block, "
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| 314 | querybase=$querybase" IF (@night=fNight AND FLOOR((@os+@ot)/"$bin"./60.)<1, @os:=@os + @ot, @os := @ot) AS os, @night :=fNight AS night "
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| 315 | querybase=$querybase$from" CROSS JOIN (SELECT @night :=0, @ot :=0, @os :=0, @bl:=0) PARAMS "
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| 316 | querybase=$querybase$where" ORDER BY fRunStart) o GROUP BY block HAVING ontime>0.75*"$bin" ORDER BY 'time'"
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| 317 |
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| 318 | # internal
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| 319 | queryint=$querystart
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| 320 | queryint=$queryint" "$excrate2", "$correxcrate2", "$cu2", "$flux2", "
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| 321 | queryint=$queryint" "$deltat2", "$ontime2", "
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| 322 | queryint=$queryint" "$excrateerr2", "$correxcrateerr2", "$cuerr2", "$fluxerr2", "
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| 323 | queryint=$queryint" "$significance2", "
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| 324 | queryint=$queryint" avg(o.night) AS night, "
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| 325 | queryint=$queryint" "$numexc2", "$numsig2", "$numbg2", "
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| 326 | queryint=$queryint" MIN(o.zdmin) AS zdmin, MAX(o.zdmax) AS zdmax, MIN(o.th) AS thmin, MAX(o.th) AS thmax, "
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| 327 | queryint=$queryint" ROUND(AVG(o.cufactor), 1) AS cufactor, ROUND(AVG(o.R750cor), 2) AS R750cor, ROUND(AVG(o.R750ref), 2) AS R750ref "
|
|---|
| 328 | queryint=$queryint" "$querybase
|
|---|
| 329 |
|
|---|
| 330 | # for collaborators
|
|---|
| 331 | querycol=$querystart
|
|---|
| 332 | querycol=$querycol" "$excrate2", "$correxcrate2", "$cu2", "$flux2", "
|
|---|
| 333 | querycol=$querycol" "$deltat2", "$ontime2", "
|
|---|
| 334 | querycol=$querycol" "$excrateerr2", "$correxcrateerr2", "$cuerr2", "$fluxerr2", "
|
|---|
| 335 | querycol=$querycol" "$significance2
|
|---|
| 336 | querycol=$querycol" "$querybase
|
|---|
| 337 |
|
|---|
| 338 | # external
|
|---|
| 339 | queryext=$querystart" "$excrate2", "$deltat2", "$ontime2", "$excrateerr2" "$querybase
|
|---|
| 340 |
|
|---|
| 341 | fi
|
|---|
| 342 |
|
|---|
| 343 | # write file for externals only for allowed binnings
|
|---|
| 344 | if [ $bin -eq 20 ] || [ $bin -eq -1 ]
|
|---|
| 345 | then
|
|---|
| 346 | fileext=$datapath"/FACT_preliminary_"$name"_external.dat"
|
|---|
| 347 | if [ "$overwrite" = "yes" ]
|
|---|
| 348 | then
|
|---|
| 349 | if [ "$mode" != "auto" ]
|
|---|
| 350 | then
|
|---|
| 351 | echo "creating "$fileext" ..."
|
|---|
| 352 | fi
|
|---|
| 353 | echo "# This file was created at "`date` > $fileext
|
|---|
| 354 | print_policy >> $fileext
|
|---|
| 355 | fi
|
|---|
| 356 | headerext="# "$num" time["$timeunit"] start["$timeunit"] stop["$timeunit"] excrate[evts/h] delta_time["$timeunit"] excrate_err[evts/h] "
|
|---|
| 357 | echo $headerext >> $fileext
|
|---|
| 358 | #echo "$queryext"
|
|---|
| 359 | mysql --defaults-file=$sqlpw -u factread --host=$host $dbname -s -e "$queryext" >> $fileext
|
|---|
| 360 | #mysql --defaults-file=$sqlpw -u factread --host=$host $dbname -e "$queryext"
|
|---|
| 361 | fi
|
|---|
| 362 | if [ "$mode" == "auto" ] && [ "$expert" == "no" ]
|
|---|
| 363 | then
|
|---|
| 364 | return
|
|---|
| 365 | fi
|
|---|
| 366 |
|
|---|
| 367 | fileint=$datapath"/FACT_preliminary_"$name"_internal.dat"
|
|---|
| 368 | if [ "$overwrite" = "yes" ]
|
|---|
| 369 | then
|
|---|
| 370 | if [ "$mode" != "auto" ]
|
|---|
| 371 | then
|
|---|
| 372 | echo "creating "$fileint" ..."
|
|---|
| 373 | fi
|
|---|
| 374 | echo "# This file was created at "`date` > $fileint
|
|---|
| 375 | print_policy >> $fileint
|
|---|
| 376 | echo "# The following query was used: " >> $fileint
|
|---|
| 377 | echo "# "$queryint >> $fileint
|
|---|
| 378 | echo "#" >> $fileint
|
|---|
| 379 | fi
|
|---|
| 380 | headerint="# "$num" time["$timeunit"] start["$timeunit"] stop["$timeunit"] excrate[evts/h] corr.excrate[evts/h] flux[CU] flux[e-11/cm2/s] delta_time["$timeunit"] ontime[min]"
|
|---|
| 381 | headerint=$headerint" excrate_err[evts/h] corr.excrate_err[evts/h] flux_err[CU] flux_err[e-11/cm2/s] significance night num_exc num_sig num_bg "
|
|---|
| 382 | headerint=$headerint" zdmin zdmax thmin thmax avg(cufactor) avg(R750cor) avg(R750ref) "
|
|---|
| 383 | echo $headerint >> $fileint
|
|---|
| 384 | #echo "$queryint"
|
|---|
| 385 | mysql --defaults-file=$sqlpw -u factread --host=$host $dbname -s -e "$queryint" >> $fileint
|
|---|
| 386 | #mysql --defaults-file=$sqlpw -u factread --host=$host $dbname -e "$queryint"
|
|---|
| 387 | if [ "$mode"="auto" ]
|
|---|
| 388 | then
|
|---|
| 389 | return
|
|---|
| 390 | fi
|
|---|
| 391 |
|
|---|
| 392 | filecol=$datapath"/FACT_preliminary_"$name"_collaborators.dat"
|
|---|
| 393 | if [ "$overwrite" = "yes" ]
|
|---|
| 394 | then
|
|---|
| 395 | echo "creating "$filecol" ..."
|
|---|
| 396 | echo "# This file was created at "`date` > $filecol
|
|---|
| 397 | print_policy >> $filecol
|
|---|
| 398 | echo "# The following query was used: " >> $filecol
|
|---|
| 399 | echo "# "$querycol >> $filecol
|
|---|
| 400 | echo "#" >> $filecol
|
|---|
| 401 | fi
|
|---|
| 402 | headercol="# "$num" time["$timeunit"] start["$timeunit"] stop["$timeunit"] excrate[evts/h] corr.excrate[evts/h] flux[CU] flux[e-11/cm2/s] delta_time["$timeunit"] ontime[min]"
|
|---|
| 403 | headercol=$headercol" excrate_err[evts/h] corr.excrate_err[evts/h] flux_err[CU] flux_err[e-11/cm2/s] significance "
|
|---|
| 404 | echo $headercol >> $filecol
|
|---|
| 405 | #echo "$querycol"
|
|---|
| 406 | mysql --defaults-file=$sqlpw -u factread --host=$host $dbname -s -e "$querycol" >> $filecol
|
|---|
| 407 | #mysql --defaults-file=$sqlpw -u factread --host=$host $dbname -e "$querycol
|
|---|
| 408 | }
|
|---|
| 409 |
|
|---|
| 410 | # evaluation of command line options (for usage with download.php)
|
|---|
| 411 |
|
|---|
| 412 | if [ ${#@} -eq 13 ]
|
|---|
| 413 | then
|
|---|
| 414 | #get_data.sh $start $stop $source $timebin $email $table $time $expert $dch $zd $th $light $dust
|
|---|
| 415 | mode="auto"
|
|---|
| 416 | overwrite="yes"
|
|---|
| 417 | # setup
|
|---|
| 418 | datapath="/home/factwww/dch/data"
|
|---|
| 419 | sqlpw=/home/fact/.mysql.pw
|
|---|
| 420 | host=10.0.100.21
|
|---|
| 421 | dbname=factdata
|
|---|
| 422 | nightmin=$1
|
|---|
| 423 | nightmax=$2
|
|---|
| 424 | source=$3
|
|---|
| 425 | bin=$4
|
|---|
| 426 | if [ "$bin" == "00" ]
|
|---|
| 427 | then
|
|---|
| 428 | bin=0
|
|---|
| 429 | fi
|
|---|
| 430 | email=$5
|
|---|
| 431 | table=$6
|
|---|
| 432 | timeunit=$7
|
|---|
| 433 | expert=$8
|
|---|
| 434 | usedch=$9 # novalue gives same result as no
|
|---|
| 435 | if [ "${10}" != "novalue" ] && [ "${10}" != "all" ]
|
|---|
| 436 | then
|
|---|
| 437 | zdmax=${10}
|
|---|
| 438 | fi
|
|---|
| 439 | if [ "${11}" != "novalue" ] && [ "${11}" != "all" ]
|
|---|
| 440 | then
|
|---|
| 441 | thmax=${11}
|
|---|
| 442 | fi
|
|---|
| 443 | if [ "${12}" != "novalue" ] && [ "${12}" != "all" ]
|
|---|
| 444 | then
|
|---|
| 445 | light=${12}
|
|---|
| 446 | fi
|
|---|
| 447 | if [ "${13}" != "novalue" ] && [ "${13}" != "all" ]
|
|---|
| 448 | then
|
|---|
| 449 | dust=${13}
|
|---|
| 450 | fi
|
|---|
| 451 | name=`echo $email | sed -e 's/@/-at-/'`
|
|---|
| 452 | get_results
|
|---|
| 453 |
|
|---|
| 454 | # sending email
|
|---|
| 455 | if [ "$expert" == "yes" ]
|
|---|
| 456 | then
|
|---|
| 457 | cat $fileint | mail -s 'FACT internal data download' -b dorner@astro.uni-wuerzburg.de -r dorner@astro.uni-wuerzburg.de $email
|
|---|
| 458 | else
|
|---|
| 459 | cat $fileext | mail -s 'FACT data download' -b dorner@astro.uni-wuerzburg.de -r dorner@astro.uni-wuerzburg.de $email
|
|---|
| 460 | fi
|
|---|
| 461 |
|
|---|
| 462 | exit
|
|---|
| 463 | fi
|
|---|
| 464 |
|
|---|
| 465 |
|
|---|
| 466 |
|
|---|
| 467 | # -------------------------------------------------------------------------------------- #
|
|---|
| 468 | # SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP SETUP #
|
|---|
| 469 | # -------------------------------------------------------------------------------------- #
|
|---|
| 470 | # #
|
|---|
| 471 | # The lines below define the basic setup for the database and give examples and #
|
|---|
| 472 | # explanations for the various options available. #
|
|---|
| 473 | # The request of the data itself is done with a smaller setup further down. #
|
|---|
| 474 | # #
|
|---|
| 475 | # -------------------------------------------------------------------------------------- #
|
|---|
| 476 | #
|
|---|
| 477 | # ----------
|
|---|
| 478 | # DB SETUP
|
|---|
| 479 | # ----------
|
|---|
| 480 | # path to file with mysql password
|
|---|
| 481 | sqlpw=/home/$USER/.mysql.pw
|
|---|
| 482 | # host of mysql server with FACT DB
|
|---|
| 483 | #host=lp-fact # ISDC
|
|---|
| 484 | host=10.0.100.21 # LP or LP via vpn
|
|---|
| 485 | #host=localhost # your local machine in case you have a copy of DB
|
|---|
| 486 | # name of database
|
|---|
| 487 | dbname=factdata
|
|---|
| 488 | #
|
|---|
| 489 | # -------------
|
|---|
| 490 | # BASIC SETUP
|
|---|
| 491 | # -------------
|
|---|
| 492 | # output path
|
|---|
| 493 | path=`dirname $0`
|
|---|
| 494 | datapath=$path"/data"
|
|---|
| 495 | # create directory for data files
|
|---|
| 496 | if ! [ -e $datapath ]
|
|---|
| 497 | then
|
|---|
| 498 | mkdir $datapath
|
|---|
| 499 | fi
|
|---|
| 500 | # time unit
|
|---|
| 501 | #timeunit=timestamp # default
|
|---|
| 502 | #timeunit=unix
|
|---|
| 503 | timeunit=mjd
|
|---|
| 504 | # time binning
|
|---|
| 505 | # positive values: minutes
|
|---|
| 506 | # negative values: days
|
|---|
| 507 | # special case 0: period
|
|---|
| 508 | # for season binning choose -365 and according start date
|
|---|
| 509 | #bin=20 # minutes
|
|---|
| 510 | #bin=0 # period
|
|---|
| 511 | bin=-1 # nightly
|
|---|
| 512 | #bin=-365 # yearly
|
|---|
| 513 | # choose analysis
|
|---|
| 514 | #table="AnalysisResultsAllQLA" # N/A
|
|---|
| 515 | table="AnalysisResultsRunLP" # QLA
|
|---|
| 516 | #table="AnalysisResultsRunISDC" # ISDC
|
|---|
| 517 | # time range
|
|---|
| 518 | nightmin=20111115
|
|---|
| 519 | nightmax=20201231
|
|---|
| 520 | # overwrite dataset file?
|
|---|
| 521 | # (useful to combine different binnings in one file -> set to "no")
|
|---|
| 522 | overwrite="yes"
|
|---|
| 523 | # optional: require minimal ontime per bin (default 20 min)
|
|---|
| 524 | #ontimelimit=30 # 30 min
|
|---|
| 525 | ontimelimit= # default 20 min
|
|---|
| 526 | # data quality selection
|
|---|
| 527 | # if you explicitely don't want a datacheck, you can comment the following line
|
|---|
| 528 | usedch="yes"
|
|---|
| 529 | # use your own datacheck instead
|
|---|
| 530 | # use a line like the following defining your own data quality selection cut
|
|---|
| 531 | #dch=" AND fR750Cor/fR750Ref BETWEEN 0.93 AND 1.3 "
|
|---|
| 532 | # apply additional predefined cuts
|
|---|
| 533 | # light conditions
|
|---|
| 534 | #light="no moon" # only data with no moon (but twilight allowed)
|
|---|
| 535 | #light="dark" # only dark night data
|
|---|
| 536 | # TNG dust - cut away data with calima
|
|---|
| 537 | #dust=1
|
|---|
| 538 | #dust=10
|
|---|
| 539 |
|
|---|
| 540 |
|
|---|
| 541 | # -------------------------------------------------------------------------------------- #
|
|---|
| 542 | # SETUP - GET YOUR DATA HERE - SETUP - GET YOUR DATA HERE - SETUP - GET YOUR DATA HERE #
|
|---|
| 543 | # -------------------------------------------------------------------------------------- #
|
|---|
| 544 | # #
|
|---|
| 545 | # Adapt the lines below to your needs. #
|
|---|
| 546 | # Overwrite default settings above. #
|
|---|
| 547 | # The data-request is sent with the line 'get_results.' #
|
|---|
| 548 | # Minumum setup: Define source key and name for file. #
|
|---|
| 549 | # The list of source keys can be found at #
|
|---|
| 550 | # https://fact-project.org/run_db/db/printtable.php?fTable=Source&fSortBy=fSourceKEY+ #
|
|---|
| 551 | # More examples can be found further down. #
|
|---|
| 552 | # #
|
|---|
| 553 | # REMARKS: #
|
|---|
| 554 | # - correction of effect of zd and threshold not yet finalized and only valid for QLA #
|
|---|
| 555 | # - no CU-conversion available for ISDC-analysis so far (that for QLA is used instead) #
|
|---|
| 556 | # #
|
|---|
| 557 | # -------------------------------------------------------------------------------------- #
|
|---|
| 558 |
|
|---|
| 559 | # 501 MAGIC
|
|---|
| 560 | source=2
|
|---|
| 561 | name="Mrk501_2014_forMAGIC"
|
|---|
| 562 | bin=-1
|
|---|
| 563 | nightmin=20140714
|
|---|
| 564 | nightmax=20140805
|
|---|
| 565 | get_results
|
|---|
| 566 |
|
|---|
| 567 | bin=30
|
|---|
| 568 | name="Mrk501_2014_forMAGIC30"
|
|---|
| 569 | get_results
|
|---|
| 570 |
|
|---|
| 571 | bin=0
|
|---|
| 572 | name="P"
|
|---|
| 573 | nightmin=20140501
|
|---|
| 574 | nightmax=20140930
|
|---|
| 575 | get_results
|
|---|
| 576 |
|
|---|
| 577 | bin=20
|
|---|
| 578 | nightmin=20140623
|
|---|
| 579 | nightmax=20140623
|
|---|
| 580 | name="Mrk501_test"
|
|---|
| 581 | get_results
|
|---|
| 582 |
|
|---|
| 583 |
|
|---|
| 584 | # end script here
|
|---|
| 585 | exit
|
|---|
| 586 |
|
|---|
| 587 |
|
|---|
| 588 |
|
|---|
| 589 | #
|
|---|
| 590 | # more examples
|
|---|
| 591 | #
|
|---|
| 592 |
|
|---|
| 593 | # Mrk 421
|
|---|
| 594 | source=1
|
|---|
| 595 | name="Mrk421_nightly"
|
|---|
| 596 | bin=-1
|
|---|
| 597 | get_results
|
|---|
| 598 | name="Mrk421_20min"
|
|---|
| 599 | bin=20
|
|---|
| 600 | get_results
|
|---|
| 601 | name="Mrk421_3d"
|
|---|
| 602 | bin=-3
|
|---|
| 603 | get_results
|
|---|
| 604 | name="Mrk421_10d"
|
|---|
| 605 | bin=-10
|
|---|
| 606 | get_results
|
|---|
| 607 | name="Mrk421_period"
|
|---|
| 608 | bin=0
|
|---|
| 609 | get_results
|
|---|
| 610 |
|
|---|
| 611 |
|
|---|
| 612 |
|
|---|
| 613 | # Mrk 501
|
|---|
| 614 | source=2
|
|---|
| 615 | name="Mrk501_nightly"
|
|---|
| 616 | bin=-1
|
|---|
| 617 | get_results
|
|---|
| 618 | name="Mrk501_20min"
|
|---|
| 619 | bin=20
|
|---|
| 620 | get_results
|
|---|
| 621 | name="Mrk501_3d"
|
|---|
| 622 | bin=-3
|
|---|
| 623 | get_results
|
|---|
| 624 | name="Mrk501_10d"
|
|---|
| 625 | bin=-10
|
|---|
| 626 | get_results
|
|---|
| 627 | name="Mrk501_period"
|
|---|
| 628 | bin=0
|
|---|
| 629 | get_results
|
|---|
| 630 |
|
|---|
| 631 |
|
|---|
| 632 |
|
|---|
| 633 | # 2344
|
|---|
| 634 | source=3
|
|---|
| 635 | name="2344_nightly"
|
|---|
| 636 | bin=-1
|
|---|
| 637 | get_results
|
|---|
| 638 | name="2344_20min"
|
|---|
| 639 | bin=20
|
|---|
| 640 | get_results
|
|---|
| 641 | name="2344_period"
|
|---|
| 642 | bin=0
|
|---|
| 643 | get_results
|
|---|
| 644 |
|
|---|
| 645 |
|
|---|
| 646 |
|
|---|
| 647 | # 1959
|
|---|
| 648 | source=7
|
|---|
| 649 | name="1959_nightly"
|
|---|
| 650 | bin=-1
|
|---|
| 651 | get_results
|
|---|
| 652 | name="1959_20min"
|
|---|
| 653 | bin=20
|
|---|
| 654 | get_results
|
|---|
| 655 | name="1959_period"
|
|---|
| 656 | bin=0
|
|---|
| 657 | get_results
|
|---|
| 658 |
|
|---|
| 659 |
|
|---|
| 660 |
|
|---|
| 661 | # 0323
|
|---|
| 662 | source=12
|
|---|
| 663 | name="0323_nightly"
|
|---|
| 664 | bin=-1
|
|---|
| 665 | get_results
|
|---|
| 666 | name="0323_20min"
|
|---|
| 667 | bin=20
|
|---|
| 668 | get_results
|
|---|
| 669 | name="0323_period"
|
|---|
| 670 | bin=0
|
|---|
| 671 | get_results
|
|---|
| 672 |
|
|---|
| 673 |
|
|---|
| 674 |
|
|---|
| 675 | # crab
|
|---|
| 676 | source=5
|
|---|
| 677 | name="Crab_nightly"
|
|---|
| 678 | bin=-1
|
|---|
| 679 | get_results
|
|---|
| 680 | name="Crab_20min"
|
|---|
| 681 | bin=20
|
|---|
| 682 | get_results
|
|---|
| 683 | name="Crab_period"
|
|---|
| 684 | bin=0
|
|---|
| 685 | get_results
|
|---|
| 686 | name="Crab_season"
|
|---|
| 687 | bin=-365
|
|---|
| 688 | nightmin=20110716
|
|---|
| 689 | nightmax=20180716
|
|---|
| 690 | get_results
|
|---|
| 691 |
|
|---|
| 692 |
|
|---|
| 693 |
|
|---|
| 694 | name="1959_2016"
|
|---|
| 695 | source=7
|
|---|
| 696 | bin=-1
|
|---|
| 697 | nightmin=20160201
|
|---|
| 698 | nightmax=20161105
|
|---|
| 699 | get_results
|
|---|
| 700 |
|
|---|
| 701 | name="1959_all_variable"
|
|---|
| 702 | overwrite="no"
|
|---|
| 703 | source=7
|
|---|
| 704 | bin=-365
|
|---|
| 705 | nightmin=20120201
|
|---|
| 706 | nightmax=20130131
|
|---|
| 707 | get_results
|
|---|
| 708 | nightmin=20130201
|
|---|
| 709 | nightmax=20140131
|
|---|
| 710 | get_results
|
|---|
| 711 | nightmin=20140201
|
|---|
| 712 | nightmax=20150131
|
|---|
| 713 | get_results
|
|---|
| 714 | bin=0
|
|---|
| 715 | nightmin=20150201
|
|---|
| 716 | nightmax=20160131
|
|---|
| 717 | get_results
|
|---|
| 718 | bin=-1
|
|---|
| 719 | nightmin=20160201
|
|---|
| 720 | nightmax=20170131
|
|---|
| 721 | get_results
|
|---|
| 722 | bin=0
|
|---|
| 723 | nightmin=20170201
|
|---|
| 724 | nightmax=20180131
|
|---|
| 725 | get_results
|
|---|
| 726 |
|
|---|
| 727 |
|
|---|
| 728 |
|
|---|
| 729 | overwrite="yes"
|
|---|
| 730 | name="1959_all_variable2"
|
|---|
| 731 | overwrite="no"
|
|---|
| 732 | source=7
|
|---|
| 733 | bin=-365
|
|---|
| 734 | nightmin=20120201
|
|---|
| 735 | nightmax=20130131
|
|---|
| 736 | get_results
|
|---|
| 737 | nightmin=20130201
|
|---|
| 738 | nightmax=20140131
|
|---|
| 739 | get_results
|
|---|
| 740 | nightmin=20140201
|
|---|
| 741 | nightmax=20150131
|
|---|
| 742 | get_results
|
|---|
| 743 | bin=0
|
|---|
| 744 | nightmin=20150201
|
|---|
| 745 | nightmax=20160131
|
|---|
| 746 | get_results
|
|---|
| 747 | bin=-1
|
|---|
| 748 | nightmin=20160201
|
|---|
| 749 | nightmax=20160817
|
|---|
| 750 | get_results
|
|---|
| 751 | bin=0
|
|---|
| 752 | nightmin=20160818
|
|---|
| 753 | nightmax=20180131
|
|---|
| 754 | get_results
|
|---|
| 755 |
|
|---|
| 756 |
|
|---|
| 757 |
|
|---|
| 758 | overwrite="yes"
|
|---|
| 759 | bin=0
|
|---|
| 760 | source=3
|
|---|
| 761 | name="2344period"
|
|---|
| 762 | get_results
|
|---|
| 763 |
|
|---|
| 764 |
|
|---|
| 765 |
|
|---|
| 766 | # flare night (HESS)
|
|---|
| 767 | name="Mrk501_10min_flarenight"
|
|---|
| 768 | source=2
|
|---|
| 769 | bin=10
|
|---|
| 770 | nightmin=20140623
|
|---|
| 771 | nightmax=20140623
|
|---|
| 772 | get_results
|
|---|
| 773 |
|
|---|
| 774 |
|
|---|
| 775 |
|
|---|
| 776 | # flare night (HESS)
|
|---|
| 777 | name="Mrk501_5min_flarenight"
|
|---|
| 778 | source=2
|
|---|
| 779 | bin=5
|
|---|
| 780 | nightmin=20140623
|
|---|
| 781 | nightmax=20140623
|
|---|
| 782 | get_results
|
|---|
| 783 |
|
|---|
| 784 |
|
|---|
| 785 |
|
|---|
| 786 |
|
|---|
| 787 | # full sample
|
|---|
| 788 | name="Mrk421_all_nightly"
|
|---|
| 789 | source=1
|
|---|
| 790 | get_results
|
|---|
| 791 |
|
|---|
| 792 | name="Mrk501_all_nightly"
|
|---|
| 793 | source=2
|
|---|
| 794 | get_results
|
|---|
| 795 |
|
|---|
| 796 | name="1959_all_nightly"
|
|---|
| 797 | source=7
|
|---|
| 798 | get_results
|
|---|
| 799 |
|
|---|
| 800 | name="2344_all_nightly"
|
|---|
| 801 | source=3
|
|---|
| 802 | get_results
|
|---|
| 803 |
|
|---|
| 804 |
|
|---|
| 805 |
|
|---|
| 806 | name="HESE20160427"
|
|---|
| 807 | source=19
|
|---|
| 808 | nightmin=20160425
|
|---|
| 809 | bin=-10
|
|---|
| 810 | get_results
|
|---|
| 811 |
|
|---|
| 812 | name="AMON20160731"
|
|---|
| 813 | source=21
|
|---|
| 814 | nightmin=20160730
|
|---|
| 815 | bin=-10
|
|---|
| 816 | get_results
|
|---|
| 817 |
|
|---|
| 818 |
|
|---|
| 819 |
|
|---|
