#!/bin/bash # # This script checks whether data can be deleted # source `dirname $0`/../Sourcefile.sh printprocesslog "INFO starting $0" ssh fact@161.72.93.131 "df -h /*da*" df -h /scratch # get last 10 nights (skip current night) dates=( `date +%Y/%m/%d --date="-360hour"` `date +%Y/%m/%d --date="-336hour"` `date +%Y/%m/%d --date="-312hour"` \ `date +%Y/%m/%d --date="-288hour"` `date +%Y/%m/%d --date="-264hour"` `date +%Y/%m/%d --date="-240hour"` \ `date +%Y/%m/%d --date="-216hour"` `date +%Y/%m/%d --date="-192hour"` `date +%Y/%m/%d --date="-168hour"` \ `date +%Y/%m/%d --date="-144hour"` `date +%Y/%m/%d --date="-120hour"` `date +%Y/%m/%d --date="-96hour"` \ `date +%Y/%m/%d --date="-72hour"` `date +%Y/%m/%d --date="-48hour"` `date +%Y/%m/%d --date="-24hour"` \ ) dates=( `ssh fact@161.72.93.131 "find /loc_data/zipraw -mindepth 3 -type d | sort | sed -e 's/\/loc_data\/zipraw\///g' "` ) numdaysok=0 numdaysoklimit=3 sumdata=0 checklimit=2500 for date in ${dates[@]} do echo "" echo "" echo "" echo $date # some counters numdiff=0 numok=0 numpb=0 # check always only $numdaysoklimit days # and require at least $checklimit GB that have been checked # remark: bc: expr1 < expr2: the result is 1 if expr1 is strictly less than expr2 if [ $numdaysok -ge $numdaysoklimit ] && [ $(echo " $sumdata > $checklimit " | bc -l) -eq 1 ] then echo "INFO more than "$numdaysoklimit" ok and more than "$checklimit" GB checked. " continue fi # get paths date2=`echo $date | sed -e 's/\///g'` lprawpath="/daq/raw/"$date lprawpath2="/loc_data/raw/"$date lpziprawpath="/loc_data/zipraw/"$date localrawpath="/scratch/from_lapalma/raw/"$date localrawpath3="/fact/raw/"$date localfailpath="/archive/fact/fails/raw/"$date wuerawpath="/fact/raw/"$date # get disk usage and number of files for directory daq=( `ssh fact@161.72.93.131 "if [ -d $lprawpath ]; then ls $lprawpath/* | wc -l; du -s -b --apparent-size $lprawpath; else echo '-1 -1 -1'; fi"` ) data=( `ssh fact@161.72.93.131 "if [ -d $lprawpath2 ]; then ls $lprawpath2/* | wc -l; du -s -b --apparent-size $lprawpath2; else echo '-1 -1 -1'; fi"` ) if [ ${daq[0]} -eq -1 ] && [ ${data[0]} -eq -1 ] then echo "INFO no data available on daq for "$date continue fi zip=( `ssh fact@161.72.93.131 "if [ -d $lpziprawpath ]; then ls $lpziprawpath/* | wc -l; du -s -b --apparent-size $lpziprawpath; else echo '-1 -1 -1'; fi"` ) dl00=( `if [ -d $localrawpath ]; then ls $localrawpath/* | wc -l; du -s -b --apparent-size $localrawpath; else echo '-1 -1 -1'; fi` ) archive=( `if [ -d $localrawpath3 ]; then ls $localrawpath3/* | wc -l; du -s -b --apparent-size $localrawpath3; else echo '-1 -1 -1'; fi` ) fails=( `if [ -d $localfailpath ]; then ls $localfailpath/* | wc -l; du -s -b --apparent-size $localfailpath; else echo '-1 -1 -1'; fi` ) wue=( `ssh operator@coma.astro.uni-wuerzburg.de "if [ -d $wuerawpath ]; then ls $wuerawpath/* | wc -l; du -s -b --apparent-size $wuerawpath; else echo '-1 -1 -1'; fi"` ) query="SELECT Sum(if(fHasDrsFile=1,2,1)) FROM RunInfo WHERE fNight="$date2 querystart="SELECT Sum(if(fHasDrsFile=1,2,1)) FROM " queryjoin="LEFT JOIN RunInfo USING(fNight,fRunID) " querywhere="WHERE fNight="$date2" AND NOT ISNULL(fStartTime) AND NOT ISNULL(fStopTime) AND ISNULL(fReturnCode)" numruns=`sendquery` if [ "$numruns" == "" ] then numruns=0 fi query=$querystart"RawFileRsyncedISDCStatus "$queryjoin" "$querywhere numrsynced=`sendquery` if [ "$numrsynced" == "" ] then numrsynced=0 fi query=$querystart"RawFileAvailISDCStatus "$queryjoin" "$querywhere numisdc=`sendquery` if [ "$numisdc" == "" ] then numisdc=0 fi query=$querystart"RawFileAvailWueStatus "$queryjoin" "$querywhere numwue=`sendquery` if [ "$numwue" == "" ] then numwue=0 fi echo "disk: " echo " daq "${daq[@]} echo " data "${data[@]} echo " zip "${zip[@]} echo " dl00 "${dl00[@]} echo " wue "${wue[@]} echo " arch "${archive[@]} echo " fail "${fails[@]} echo "db: " echo " runinfo "$numruns echo " rsynced "$numrsynced echo " isdc "$numisdc echo " wue "$numwue # check if file are available in the different places if [ ${dl00[0]} -eq -1 ] && [ $date2 -lt 20120308 ] then echo "INFO data not available on /scratch on dl00 for "$date fi if [ ${archive[0]} -eq -1 ] then echo "INFO data not in archive for "$date fi # check if number of files agree in the different places # archive if ! [ ${archive[0]} -eq -1 ] && ! [ ${archive[0]} -eq ${daq[0]} ] then echo "WARN number of files in archive (" ${archive[0]}") does not agree with number of files in LP (" ${daq[0]}") for "$date #check /archive/rev_1/failed if ! [ ${fails[0]} -eq -1 ] then sum=`echo " ${fails[0]} + ${archive[0]} " | bc -l ` if ! [ $sum -eq ${daq[0]} ] then echo "ERROR number of files in archive ("$sum") is different from number of files in La Palma ("${daq[0]}")." numpb=`echo " $numpb + 1 " | bc -l ` result="1" else numok=`echo " $numok + 1 " | bc -l ` result="0" fi else result="1" fi else numok=`echo " $numok + 1 " | bc -l ` result="0" fi # lp if ! [ ${data[0]} -eq -1 ] && ! [ ${data[0]} -eq ${daq[0]} ] then echo "WARN number of files on data (" ${data[0]}") does not agree with number of files on daq (" ${daq[0]}") for "$date numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # dl00 if ! [ ${dl00[0]} -eq -1 ] && ! [ ${dl00[0]} -eq ${daq[0]} ] then echo "WARN number of files on dl00 (" ${dl00[0]}") does not agree with number of files in LP (" ${daq[0]}") for "$date numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # wue if ! [ ${wue[0]} -eq -1 ] && ! [ ${wue[0]} -eq ${daq[0]} ] then echo "WARN number of files in Wue (" ${wue[0]}") does not agree with number of files in LP (" ${daq[0]}") for "$date numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi result=$result"-" # check du for raw files # la palma if ! [ ${daq[1]} -eq ${data[1]} ] then echo "WARN size of data doesn't agree on daq ("${daq[1]}") and data ("${data[1]}") for "$date numdiff=`echo " $numdiff + 1 " | bc -l ` numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # check du for zipped raw files # dl00 if ! [ ${zip[1]} -eq ${dl00[1]} ] && [ $date2 -gt 20120307 ] then echo "WARN size of data doesn't agree on data ("${zip[1]}") and dl00 ("${dl00[1]}") for "$date if ! [ ${dl00[1]} -eq -1 ] then numdiff=`echo " $numdiff + 1 " | bc -l ` numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # archive if ! [ ${zip[1]} -eq ${archive[1]} ] then echo "WARN size of data doesn't agree on data ("${zip[1]}") and in archive ("${archive[1]}") for "$date if ! [ ${archive[1]} -eq -1 ] then numdiff=`echo " $numdiff + 1 " | bc -l ` numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # wue if ! [ ${zip[1]} -eq ${wue[1]} ] then echo "WARN size of data doesn't agree on data ("${zip[1]}") and in Wue ("${wue[1]}") for "$date if ! [ ${wue[1]} -eq -1 ] then numdiff=`echo " $numdiff + 1 " | bc -l ` numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi result=$result"-" # check DB (only starting from 8.3.2012) (if-clause to be removed later) if [ $date2 -gt 20120307 ] then # lp if ! [ $numruns -eq ${daq[0]} ] then echo "WARN number of runs on daq ("${daq[0]}") not equal to number of runs ("$numruns")" numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # dl00 if ! [ $numruns -eq $numrsynced ] then echo "WARN number of rsynced runs ("$numrsynced") not equal to number of runs ("$numruns")" numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # archive if ! [ $numruns -eq $numisdc ] then echo "WARN number of ingested files in archive ("$numisdc") not equal to number of runs ("$numruns")" numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi # wue if ! [ $numruns -eq $numwue ] then echo "WARN number of backuped in Wue ("$numrsynced") not equal to number of runs ("$numruns")" numpb=`echo " $numpb + 1 " | bc -l ` result=$result"1" else numok=`echo " $numok + 1 " | bc -l ` result=$result"0" fi fi #numdiff=0 # add for debugging so that single file sizes are not checked echo "numdiff: "$numdiff echo "INFO numok: "$numok echo "INFO numpb: "$numpb if [ $numdiff -gt 0 ] then query="SELECT fRunID FROM RunInfo WHERE fNight="$date2 runs=( `sendquery` ) archivediffcounter=0 archiveokcounter=0 wuediffcounter=0 wueokcounter=0 dl00diffcounter=0 dl00okcounter=0 datadiffcounter=0 dataokcounter=0 echo "INFO found "${#runs[@]}" rawfiles in DB." for run in ${runs[@]} do rawfile=$date2"_"`printf %03d $run`".fits" rawfile2=$rawfile".gz" # get file sizes for run sizedaq=( `ssh fact@161.72.93.131 "ls -l ${lprawpath}/${rawfile} 2>/dev/null | awk '{ print \\\$5 }'"` ) sizedata=( `ssh fact@161.72.93.131 "ls -l $lprawpath2/$rawfile 2>/dev/null | awk '{ print \\\$5 }'"` ) sizezip=( `ssh fact@161.72.93.131 "ls -l $lpziprawpath/$rawfile2 2>/dev/null | awk '{ print \\\$5 }'"` ) if ! [ ${dl00[1]} -eq -1 ] then sizedl00=( `ls -l $localrawpath/$rawfile2 2>/dev/null | awk '{ print \$5 }'` ) fi if ! [ ${archive[1]} -eq -1 ] then sizearchive=( `ls -l $localrawpath3/$rawfile2 2>/dev/null | awk '{ print \$5 }'` ) fi if ! [ ${fails[1]} -eq -1 ] then sizefails=( `ls -l $localfailpath/$rawfile2 2>/dev/null | awk '{ print \$5 }'` ) fi if ! [ ${wue[1]} -eq -1 ] then sizewue=( `ssh operator@coma.astro.uni-wuerzburg.de "ls -l $wuerawpath/$rawfile2 2>/dev/null | awk '{ print \\\$5 }'"` ) fi # check file sizes for run # lp if ! [ "$sizedaq" = "$sizedata" ] then echo " "$rawfile" daq("$sizedaq") data("$sizedata")" datadiffcounter=`echo " $datadiffcounter + 1 " | bc -l ` else dataokcounter=`echo " $dataokcounter + 1 " | bc -l ` fi # dl00 if ! [ "$sizezip" = "$sizedl00" ] && ! [ ${dl00[1]} -eq -1 ] then echo " "$rawfile2" data("$sizezip") dl00("$sizedl00")" dl00diffcounter=`echo " $dl00diffcounter + 1 " | bc -l ` else dl00okcounter=`echo " $dl00okcounter + 1 " | bc -l ` fi # archive if [ "$sizezip" != "$sizearchive" -a ${archive[1]} -ne -1 ] || [ "$sizezip" != "$sizefails" -a ${fails[1]} -ne -1 ] then echo " "$rawfile2" data("$sizezip") archive("$sizearchive"/"$sizefails")" archivediffcounter=`echo " $archivediffcounter + 1 " | bc -l ` else archiveokcounter=`echo " $archiveokcounter + 1 " | bc -l ` fi # wue if ! [ "$sizezip" = "$sizewue" ] && ! [ ${wue[1]} -eq -1 ] then echo " "$rawfile2" data("$sizezip") wue("$sizewue")" wuediffcounter=`echo " $wuediffcounter + 1 " | bc -l ` else wueokcounter=`echo " $wueokcounter + 1 " | bc -l ` fi done query="SELECT fRunID FROM RunInfo WHERE fNight="$date2" AND fHasDrsFile=1" drsruns=( `sendquery` ) echo "INFO found "${#drsruns[@]}" drsfiles in DB." for drsrun in ${drsruns[@]} do rawfile=$date2"_"`printf %03d $run`"drs.fits" rawfile2=$rawfile".gz" # get file sizes for run sizedaq=( `ssh fact@161.72.93.131 "ls -l ${lprawpath}/${rawfile} 2>/dev/null | awk '{ print \\\$5 }'"` ) sizedata=( `ssh fact@161.72.93.131 "ls -l $lprawpath2/$rawfile 2>/dev/null | awk '{ print \\\$5 }'"` ) sizezip=( `ssh fact@161.72.93.131 "ls -l $lpziprawpath/$rawfile2 2>/dev/null | awk '{ print \\\$5 }'"` ) if ! [ ${dl00[1]} -eq -1 ] then sizedl00=( `ls -l $localrawpath/$rawfile2 2>/dev/null | awk '{ print \$5 }'` ) fi if ! [ ${archive[1]} -eq -1 ] then sizearchive=( `ls -l $localrawpath3/$rawfile2 2>/dev/null | awk '{ print \$5 }'` ) fi if ! [ ${fails[1]} -eq -1 ] then sizefails=( `ls -l $localfailpath/$rawfile2 2>/dev/null | awk '{ print \$5 }'` ) fi if ! [ ${wue[1]} -eq -1 ] then sizewue=( `ssh operator@coma.astro.uni-wuerzburg.de "ls -l $wuerawpath/$rawfile2 2>/dev/null | awk '{ print \\\$5 }'"` ) fi # check file sizes for run # lp if ! [ "$sizedaq" = "$sizedata" ] then echo " "$rawfile" daq("$sizedaq") data("$sizedata")" datadiffcounter=`echo " $datadiffcounter + 1 " | bc -l ` else dataokcounter=`echo " $dataokcounter + 1 " | bc -l ` fi # dl00 if ! [ "$sizezip" = "$sizedl00" ] && ! [ ${dl00[1]} -eq -1 ] then echo " "$rawfile2" data("$sizezip") dl00("$sizedl00")" dl00diffcounter=`echo " $dl00diffcounter + 1 " | bc -l ` else dl00okcounter=`echo " $dl00okcounter + 1 " | bc -l ` fi if [ "$sizezip" != "$sizearchive" -a ${archive[1]} -ne -1 ] || [ "$sizezip" != "$sizefails" -a ${fails[1]} -ne -1 ] then echo " "$rawfile2" data("$sizezip") archive("$sizearchive"/"$sizefails")" archivediffcounter=`echo " $archivediffcounter + 1 " | bc -l ` else archiveokcounter=`echo " $archiveokcounter + 1 " | bc -l ` fi # wue if ! [ "$sizezip" = "$sizewue" ] && ! [ ${wue[1]} -eq -1 ] then echo " "$rawfile2" data("$sizezip") wue("$sizewue")" wuediffcounter=`echo " $wuediffcounter + 1 " | bc -l ` else wueokcounter=`echo " $wueokcounter + 1 " | bc -l ` fi done result=$result"-" # raw files if [ $dataokcounter -eq ${data[0]} ] then numok=`echo " $numok + 1 " | bc -l ` result=$result"0" else result=$result"1" numpb=`echo " $numpb + 1 " | bc -l ` fi # zipped files # dl00 if [ $dl00okcounter -eq ${dl00[0]} ] then result=$result"0" numok=`echo " $numok + 1 " | bc -l ` else result=$result"1" numpb=`echo " $numpb + 1 " | bc -l ` fi # archive if [ $archiveokcounter -eq ${daq[0]} ] then result=$result"0" numok=`echo " $numok + 1 " | bc -l ` else result=$result"1" numpb=`echo " $numpb + 1 " | bc -l ` fi # wue if [ $wueokcounter -eq ${wue[0]} ] then result=$result"0" numok=`echo " $numok + 1 " | bc -l ` else result=$result"1" numpb=`echo " $numpb + 1 " | bc -l ` fi echo "INFO "$dataokcounter" files are ok on data (raw)." echo "INFO "$dl00okcounter" files are ok on dl00." echo "INFO "$wueokcounter" files are ok in Wue." echo "INFO "$archiveokcounter" files are ok in the archive." echo "WARN "$datadiffcounter" files have a different size on data (raw)." echo "WARN "$dl00diffcounter" files have a different size on dl00." echo "WARN "$wuediffcounter" files have a different size in Wue." echo "WARN "$archivediffcounter" files have a different size in the archive." fi # print summary: echo "INFO day ok: "$numdaysok echo "INFO numok: "$numok echo "INFO numpb: "$numpb echo "result:" echo "(#files-dudir-db-filesize)" echo " ldaw-ldaw-ldaw-ldaw" echo " "$result sumdatanew=`echo " ( ${data[1]} + ${zip[1]} ) / 1024 / 1024 / 1024 " | bc -l ` sumdata=`echo " $sumdata + $sumdatanew " | bc -l ` echo "checked alread "$sumdata" GB."$sumdatanew" "${data[1]}" "${zip[1]} if [ $numpb -lt 4 ] then numdaysok=`echo " $numdaysok + 1 " | bc -l ` fi done printprocesslog "INFO finished $0"