#!/bin/bash today=`date +%F` logfile=/home/`whoami`/DataCheck/log/ZipRaw$today.log # get last 3 nights dates=( `date +%Y/%m/%d` `date +%Y/%m/%d --date="-1day"` `date +%Y/%m/%d --date="-2day"` `date +%Y/%m/%d --date="-3day"` ) # do rsync for rawfiles of these dates for date in ${dates[@]} do echo "" >> $logfile 2>&1 echo "" >> $logfile 2>&1 echo "" >> $logfile 2>&1 rawdir=/loc_data/raw/$date echo `date`": processing files in "$rawdir >> $logfile 2>&1 # check if data are available from that night if ! [ -d $rawdir ] then echo `date`": no data available in "$rawdir >> $logfile 2>&1 continue fi zipdir=/loc_data/zipraw/$date if ! [ -d $zipdir ] then # create output directory for zip mkdir -pv $zipdir >> $logfile 2>&1 fi # find all fits-files starting with the oldest file echo `date`": finding files to be zipped in $rawdir..." >> $logfile 2>&1 fitsfiles=`find $rawdir -type f -name '*fits'| sort ` if [ ${#fitsfiles[@]} -eq 0 ] then echo `date`": no files to be zipped in $rawdir..." >> $logfile 2>&1 continue fi # loop to zip files echo `date`": zipping files in $rawdir..." >> $logfile 2>&1 for file in $fitsfiles do # filename for temporary and final zipfile zipfile=`echo $file | sed -e 's/raw/zipraw/' -e 's/fits/fits.gz/'` zipfiletmp=`echo $file | sed -e 's/raw/zipraw/' -e 's/fits/fits.tmp.gz/'` # check if zipped file already exists if [ -e $zipfile ] then continue fi # check if raw file was accessed in the last 30 minutes isnew=`find $file -amin -30` if [ "$isnew" != "" ] then echo $file" is not older than 30 min => continue" >> $logfile 2>&1 continue fi # check if file is already finished # original file on daq (if data was taken on daq origfile=`echo $file | sed -e 's/loc_data/daq/'` if [ -e $origfile ] then # get time of last modification as seconds since Epoch for both files timeorig=`stat -c %Y $origfile` timecopy=`stat -c %Y $file` # compare times if ! [ $timeorig -eq $timecopy ] then # if times are not the same, the file is still open => no zip echo `date`": file "$file" not yet closed => continue" >> $logfile 2>&1 continue fi else # if the origfile doesn't exist, the data was probably written not on daq but on data echo `date`": file "$file" was probably taken on data and not daq " >> $logfile 2>&1 fi echo `date`": zipping "$file" to "$zipfile" ..." >> $logfile 2>&1 # zip file to stdout and pipe it to outputfile if pigz -1 -c -f $file > $zipfiletmp; then # if successful, move temporary to final zipfile mv -v $zipfiletmp $zipfile >> $logfile 2>&1 else # if not successful, remove temporary zipfile rm -v $zipfiletmp >> $logfile 2>&1 fi done done echo "finished zipping..." >> $logfile 2>&1