source: trunk/MagicSoft/Mars/Changelog@ 5838

 
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                                                 -*-*- END OF LINE -*-*-

 2005/01/14 Markus Gaug

   * msignal/MExtractTimeAndChargeDigitalFilter.cc
     - added a small acceleration of the program, tested by Hendrik and
       me.



 2005/01/14 Thomas Bretz
 
   * callisto.cc:
     - fixed a typo in output

   * manalysis/MGeomApply.cc:
     - removed some old code already in comments

   * manalysis/MMultiDimDistCalc.cc, mhbase/MHMatrix.[h,cc],
     mranforest/MRanForestCalc.cc, mtools/MHSimulatedAnnealing.[h,cc],
     mtools/MSimulatedAnnealing.h:
     - added include of TVector because in newer root version it is 
       not included from TMatrix anymore

   * mbase/BaseLinkDef.h, mbase/MMath.[h,cc]:
     - to stick to the convention of TMath in newer root versions MMath
       changed from a class to a namespace

   * mbase/MEvtLoop.[h,cc]:
     - to support newer root version added a second Write-function
       with a const qualifier.

   * mdata/MDataChain.cc:
     - changed access to TMath for newer root versions

   * mfileio/MChain.[h,cc]:
     - implemented a workaround for teh changed LoadTree definition
       in newer root-versions

   * mfileio/MReadTree.cc:
     - fixed a bug in CheckBranchSize caused some warning to be
       displayed

   * mhflux/MHAlpha.cc:
     - removed check for fResult in PostProcess (it is always there)

   * msignal/MExtractTimeFastSpline.cc:
     - fixed delete --> delete[]



 2005/01/14 Abelardo Moralejo

   * mtemp/mpadova/macros/trainsubsample.C, RanForestDISP.C
     - added. Two macros used in the analysis of real wobble mode data.



 2005/01/14 Daniela Dorner

   * macros/sql/filldotrun.C
     - added new arehucas-verions and changed code accordingly



 2005/01/13 Abelardo Moralejo

   * macros/starmc.C
     - Added (commented) lines for the case of gamma MC source off-axis 
       (wobble mode). Changed default extractor to 
       MExtractFixedWindowPeakSearch.



 2005/01/13 Raquel de los Reyes

   * callisto.rc
     - introduced several configuration lines 
       (format: "class".DataCheck: No) to allow callisto 
       to run with rawfiles. Necessary for the datacheck.



 2005/01/13 Markus Gaug

   * mcalib/MCalibColorSet.cc
     - fixed runs 45605-45609

   * msignal/MExtractor.h
     - take out the variable fHiLoLast from the streamer. Will be 
       initialized in the ReInit(), if needed

   * msignal/MExtractor.cc
     - Initialized fHiLoLast to 0. Otherwise, a second eventloop with 
       the same extractor may have that variable set to a certain 
       value, even if not desired. The ReInit() fixes fHiLoLast, if 
       different from 0.

   * mpedestal/MExtractPedestal.cc
   * mpedestal/MPedCalcPedRun.cc
   * mpedestal/MPedCalcFromLoGain.cc
     - fix the output of the print to the correct value for the case 
       that the extractor is used.


 2005/01/13 Thomas Bretz

   * callisto.rc:
     - fixed some typos

   * mbase/MLog.cc:
     - unset DEBUG defined unintentionally

   * msignal/MExtractTimeAndChargeDigitalFilter.cc:
     - removed printing Weights in InitArrays, because otherwise
       the output of a full data calibration is totally crowded
       with numbers. Having the weights-file name on the display
       is perfectly enough.



 2005/01/12 Markus Gaug

   * mcalib/MCalibrationIntensityRelTimeCam.cc
     - added fit to improve averageing of the obtained results



 2005/01/12 Thomas Bretz

   * manalysis/MMatrixLoop.cc:
     - changed name to MRead because it now derives from MRead

   * mbase/MEvtLoop.[h,cc]:
     - implemented an option not to cascade the status display to the
       parameter list in PreProcess

   * mhflux/MHAlpha.cc:
     - changed name of "Significance" to "MinimizationValue"
     - return -significance to have a value being minimized

   * mhist/MHCamera.cc:
     - fixed output of text in legend

   * mhist/MHEvent.[h,cc]:
     - implemented new options for calibrated pedestals

   * mmain/MEventDisplay.cc:
     - fixed to support latest changes in MJCalibrateSignal

   * mpedestal/MPedPhotCam.cc:
     - added new options in GetPixelContent (4 and 5) to support
       a correct camera display

   * mjobs/MJCalibrateSignal.cc:
     - fixed display of calibrated pedestal and pedestal rms
     - changed order of plots. Now all interpolated values 
       (means all calibrated values which are bad-pixel treated)
       are displayed behind the unsuitable pixels.

   * mjobs/MJ*.cc:
     - corrected all wrong %06d to %08d to fit the number of
       digits in run-numbers



 2005/01/11 Abelardo Moralejo

   * mjobs/Makefile
     - added missing include -I ../mtrigger



 2005/01/11 Thomas Bretz

   * callisto.cc, callisto.rc:
     - changed such, that all three kinds of pedestals are calcualted 
       (usefull for studies)

   * manalysis/MMatrixLoop.[h,cc]:
     - derived from MRead
     - implemented some basic functions from MRead

   * mfilter/MFCosmics.[h,cc]:
     - allow setting of name of MPedestalCam

   * mhbase/MBinning.[h,cc]:
     - added SetEdges taking MParList as input

   * mhflux/MHAlpha.cc:
     - use new function from MBinning

   * mjobs/MJCalibrateSignal.[h,cc]:
     - changed to calculate all three kinds of pedestals
     - added filters for trigger pattern and illuminated events

   * mjobs/MJPedestal.cc:
     - give different names to tabs with different pedestals

   * mjobs/MJStar.cc:
     - on request changed used pedestal from "FromExtractor" to
       "FromExtractorRndm"

   * mtrigger/MTriggerPattern.h:
     - added Reset function

   * mtrigger/MTriggerPatternDecode.[h,cc]:
     - added using file format version number



 2005/01/11 Markus Gaug

   * mbadpixels/MBadPixelsPix.cc
     - updated documentation

   * mcalib/MCalibrationChargeCalc.cc
     - make pixels with deviating number of phes unreliable instead of 
       unsuitable (this was already thought so, but missed to modify
       at one place).

   * mhcalib/MHCalibrationCam.[h,cc]
     - add possible flag 'kInterlaced': default: kFALSE (like before)
     - added pointer to MRawEvtHeader to deny cosmics events in case
       of 'interlaced' flag is set. No changes for 'normal' calibration



 2005/01/10 Benjamin Riegel
 
   * mreport/MReportStarguider.cc, mreport/MReportStarguider.h
     - added two classes for implementing starguider-data 
 
   * mreport/ReportLinkDef.h
     - added class MReportStarguider to be linked:
       #pragma link C++ class MReportStarguider+;
     
   * mreport/Makefile
     - added file MReportStarguider.cc
   
   * merpp.cc
     - added two containers ( MReportStarguider, MTimeStarguider ) and
       added MReportStarguider to the list:
       w->AddContainer("MReportStarguider",  "Starguider");
       w->AddContainer("MTimeStarguider",    "Starguider");
       r->AddToList("MReportStarguider");
       
       
       
 2005/01/10 Markus Gaug

   * mcalib/MCalibColorSet.cc
     - return kFALSE for CL-run instead of kTRUE

   * mcalib/MCalibrationChargeCalc.cc
     - stop program in case that multiple colours are found in same file
       without intensity calibration

   * mbadpixels/MBadPixelsPix.h
     - added two new possible UnCalibrated_t flags for the hi-lo 
       calibration

   * macros/calibration.C
     - add the calls to:
          MArray::Class()->IgnoreTObjectStreamer();
          MParContainer::Class()->IgnoreTObjectStreamer();
       in main.

   * msignal/MExtractor.h
     - added Getter for fOffsetLoGain (was still missing)

   * mhcalib/MHCalibrationChargeCam.[h,cc]
     - remove pixels with histogram overflow only if their percentage 
       passes a certain limit (default: 0.5%). Before, every overflow 
       lead to an unsuitable pixel.

   * msignal/MExtractTimeAndChargeDigitalFilter.[h,cc]
     - implemented changes suggested by T.B. to speed up calculations
     - take fNameWeightsFile into the streamer, otherwise the Clone() 
       will always create an extractor with cosmic's weights. 
     - set fOffsetLoGain to a slighly higher value. The DF seems to 
       have a different offset since it uses different pulse shapes 
       and thus sightly different time definitions.



 2005/01/10 Thomas Bretz

   * mhvstime/MHVsTime.cc:
     - fixed a compiler error for gcc 2.95.3, see Mantis bug # 157

   * callisto.cc:
     - changed such, that the calculated pedestal is not random
       anymore
     - added code to calculate the pedestal also with randomization,
       but this code is for the moment commented out.

   * callisto.rc:
     - fixed naming of pedestal calculation

   * mbadpixels/MBadPixelsCalc.cc:
     - added a second check which compares the pedestal rms with
       the variance of the pedestal rms in the same sector

   * mjobs/MJCalibrateSignal.[h,cc]:
     - changed to calculate the pedestal from extractor without 
       randomization
     - added code to calculate the pedestal also with randomization,
       but this code is for the moment commented out.

   * mjobs/MJCalibration.cc:
     - made sure that pedcam always has the correct name
       (FIXME? Print a warning if it has the wrong name)

   * mjobs/MJPedestal.[h,cc]:
     - changed such, that it allows the calculation of pedestals
       in three different ways (fundamental, fromextractor, 
       fromextractorrndm)
     - therefor removed SetExtractorResolution and added
       + void SetExtractionFundamental()
       + void SetExtractionWithExtractorRndm()
       + void SetExtractionWithExtractor()

   * mjobs/MJStar.cc:
     - changed/fixed the input name of the MPedPhotCam used in the
       image cleaning

   * mraw/MRawFileRead.[h,cc]:
     - changed return type of OpenNextFile
     - in some cases return kERROR in OpenNextFile to abort the Processing
       with an error

   * mraw/MRawRunHeader.cc:
     - call a wrong file format version ERROR now

   * mhflux/MAlphaFitter.[h,cc]:
     - make sure that resetted values are returned if fit failed
     - set default scaling too kOffRegion

   * mhflux/MHAlpha.cc:
     - some small fixes to handling of MHAlphaOff

   * mhflux/MHFalseSource.[h,cc]:
     - implemented possible usage of MHFalsSourceOff for On-Off-Analysis
     - updated display accordingly
     - updated fit accordingly
     - removed catalog temporarily from plots until I found the
       reason for the strange crashes

   * mbadpixels/MBadPixelCalc.[h,cc]:
     - implemented the possibility to check the pedestal rms against the
       variance of the pedstal rms, too. The option is curretly switched
       off.
     - enahanced informal output in PreProcess

   * mbase/MTaskList.cc:
     - a little change to some output



 2005/01/10 Wolfgang Wittek

   * mfbase/MFEventSelector2.cc
     - check whether filter exists before calling 
       filter->CallPreProcess(parlist)



 2005/01/08 Markus Gaug

   * mhcalib/MHCalibrationHiLoCam.[h,cc]
   * mcalib/MCalibrationHiLoCam.[h,cc]
   * mcalib/MCalibrationHiLoPix.[h,cc]
   * mcalib/MIntensityCalibrationHiLoCam.[h,cc]
   * mhcalib/Makefile, mcalib/Makefile, mhcalib/HCalibLinkDef.h, 
     mcalib/CalibLinkDef.h
     - new classes for calibration of conversion high-gain vs. low-gain 

   * msignal/MExtractedSignalPix.[h,cc]
     - added data member fChisquare, set to -1. by Clear() and Reset()
     - raised version number by 1

   * msignal/MExtractedSignalCam.[h,cc]
     - added data member fNdf, set to -1 by default
     - new function: GetProb(const Int_t pixidx) to be called to 
       calculate the joint probability of Chisquare of pixel "pixidx"
       and fNdf
     - added documentation of data members
     - raised version number by 1

   * mhcalib/MHCalibrationChargeCam.cc
     - strengthened default histogram limits a bit, should accelerate
       the calibration by 20%.

   * mjobs/MJCalibrateSignalFromOutside.cc
     - fixed two lines to compile MCalibrateData with the recent changes
       by TB

   * msignal/MExtractTimeAndChargeDigitalFilter.cc
     - fixed two bugs introduced yesterday by TB.

   * msignal/MExtractTimeAndChargeSpline.cc
   * msignal/MExtractTimeAndChargeSlidingWindow.cc
     - adopt part of TB's speed accelerations into these classes

   * msignal/MExtractTimeAndCharge.cc
     - fix the low-gain extraction window for the case that the high-gain
       is saturated. Was skipped so far.



 2005/01/07 Markus Gaug

   * msignal/MExtractFixedWindowPeakSearch.[h,cc]
     - catch the case that more than 90% of the pixels have saturated 
       signals and fix the extraction window from the occurrance of 
       saturation, then. Important for high-intensity calibration events.


   * msignal/MExtractor.cc
   * msignal/MExtractTime.cc
   * msignal/MExtractTimeAndCharge.cc
     - added some documentation

   * msignal/MExtractTime.[h,cc]  
     - moved the empty function FindTimeHiGain() and FindTimeLoGain() to
       the header-file.
      



 2005/01/07 Abelardo Moralejo

   * mbase/MLog.h
     - Added #include "TSystem.h", otherwise gSystem is not recognized
       in Mac OSX.

   * manalysis/MMakePadHistograms.cc
     - Changed badcalc.SetNamePedPhotContainer to 
       badcalc.SetNamePedPhotCam



 2005/01/07 Thomas Bretz

   * mbadpixels/MBadPixelsCalc.[h,cc], macros/ONOFFAnalaysis.C:
     - replaced PedPhotContainer by PedPhotCam for consistency
   
   * mbase/MLog.[h,cc]:
     - return *this in Seperator()

   * mbase/MPrint.[h,cc]:
     - use new separator manipulator in PreProcess
     - fixed a type: separator instead of seperator

   * mfileio/MReadTree.[h,cc]:
     - added a check for branch->IsAutoDelete() in Notify()

   * mpedestal/MExtractPedestal.[h,cc]:
     - added new option 'fRandomCalculation' be used to switch on-/off-
       randomization in extractors, the default should be like before
     - added Process() calling Calc()

   * mpedestal/MPedCalcFromLoGain.[h,cc], mpedestal/MPedCalcPedRun.[h,cc]:
     - renamed Process() to Calc()

   * Makefile:
     - removed macros/calibration.C, which seems to have been
       unintantionally introduced.

   * manalysis/Makefile:
     - removed unintantionally introduced wrong include

   * msignal/MExtractTimeAndChargeDigitalFilter.cc:
     - a small acceleration discussed with Hendrik by replacing a
       counter in a loop by pointer arithmetics

   * mraw/MRawEvtPixelIter.cc:
     - fixed a bug in GetMaxIdxHiLoGain which caused the loop to
       read one byte behind the end of the array
     - fixed HasLoGain() which really did weired things, means accessing
       sometimes memory somewhere. This could theoretically result
       in assigning the wrong lo-gains to the wrong pixels.

   * mtrigger/MTriggerPattern.[h,cc], mtrigger/MTriggerPatternDecode.[h,cc],
     mtrigger/MFTriggerPattern.[h,cc]:
     - added

   * mtrigger/Makefile, mtrigger/TriggerLinkDef.h:
     - added MTriggerPattern, MTriggerPatternDecode and MFTriggerPattern

   * manalysis/MEnergyEstParam.h:
     - added a new function SetVariables calling SetCoeff

   * mcalib/MCalibrateData.[h,cc]:
     - removed data members for container names
     - added new lists for container names
     - allow to calibrate more than one pedestal container at the same
       time

   * mjobs/MJCalibrateSignal.cc:
     - changed accordingly



 2005/01/05 Thomas Bretz

   * mcalib/MCalibrationBlindPix.cc, mcalib/MCalibrationChargeCalc.cc,
     mhcalib/MHCalibrationRelTimeCam.cc:
     - made some output lines fit into convinience window of 80 col

   * mhist/MHCamEvent.cc:
     - make sure that x-axis has correct title

   * msignal/MArrivalTimePix.cc:
     - init error to -1 which is a obviously non valid value
     - fixed IsValid() which gave wrong results

   * msignal/MExtractTimeAndCharge.cc, msignal/MExtractedSignalPix.cc:
     - made sure that LoGain is flagged non-valid if no lo-gain exists
     - push time back at the edge of the allowed limits if outside

   * mbase/MGList.[h,cc]:
     - introduced new functions Delete and DeletePictures
     - SetBit(kMustCleanup) in constructor. Otherwise it is not
       correctly removed from ListOfCleanups

   * mbase/MLog.cc:
     - SetBit(kMustCleanup) if adding a plugin to make sure it is cleaned
       from the list

   * mbase/MParContainer.[h,cc]:
     - replaced return type of GetDescriptor by TString. The old version
       was terribly wrong! The returned memory wasn't removed as soon
       as the function returned.

   * mbase/MStatusDisplay.[h,cc]:
     - for security (thread safty) replaced all Form() by MString::Form()
     - implemented a more secure scheme of Closing (Clone()) this was
       a hint given by valgrind
     - set kMustCleanup for all new object in ClonePad not only kCanDelete
     - fixed some lines in pulldown-menus
     - add TPads to ListOfCleanups in ClonePad (workaround!)

   * mbase/MString.[h,cc]:
     - implemented a new static Form() function returning a copy of
       the result

   * mbase/MTask.[h,cc]:
     - replaced return type of GetDescriptor by TString. The old version
       was terribly wrong! The returned memory wasn't removed as soon
       as the function returned. 
     - Made GetDescriptor thread safe using MString::Form

   * mfileio/MWriteRootFile.cc:
     - Use GetDescriptor().Data() when using any kind of printf function

   * mhbase/MFillH.cc:
     - replaced string concatenation in all constructors by a Form 
       (also suggested by valgrind)

   * mhcalib/MHCalibrationRelTimeCam.cc:
     - made some output fit into 80col boundary




 2005/01/03 Thomas Bretz (HAPPY NEW YEAR)

   * mfht:
     - added new directory for hexagonal fourier transformation

   * mfht/HftIncl.h, mhft/HftLinkDef.h, mhft/MGeomCamMagicXT.[h,cc],
     mhft/MGeomCamMagicEnhance.[h,cc], mhft/MHexgaonalFT.[h,cc], 
     mhft/MHexagonalFreqSpace.[h,cc], mhft/MHexagonalFTCalc.[h,cc],
     mhft/Makefile:
     - added

   * macros/extendcam.C: 
     - added: tutorial for MGeomCamExtend

   * macros/hft.C: 
     - added: tutorial for MHexgonalFTCalc

   * macros/dohtml.C: 
     - updated

   * macros/rootlogon.C: 
     - updated

   * Makefile:
     - mhft added

   * mbase/MParContainer.cc, mbase/MLog.cc:
     - added a pre-compiler option for destructor debugging

   * mbase/MTaskList.[h,cc]:
     - added new function Replace

   * mdata/MDataChain.cc, mfbase/MF.cc:
     - shortened some output

   * mdata/MDataArray.[h,cc]:
     - added new function FindRule

   * mfileio/MReadTree.[h,cc]:
     - enhanced functionality to be able to read a TTree stored in memory
       instead of a file. Therefor introduced fTree which is now the pointer
       used and replaced fChain where TTree and TChain have common behaviour.
       Where they behave uncommon new code for the new case has been added.

   * mfileio/MWriteRootFile.[h,cc]:
     - enhanced functionality to be able to write a TTree into memory
       instead of a file. This were maily bugfixes for the case fOut==0, which
       must be handled correctly. Becarefull a tree filles without a file
       is not deleted automatically!
    
   * mhbase/MBinning.h:
     - added copy constructor
     - fixed buggy SetEdges(MBinning&) which didn't work

   * mhbase/MHMatrix.cc:
     - when adding a new rule check first if the same rule already exists

   * mhflux/MAlphaFitter.[h,cc]:
     - added new functionality to support on-off analysis
     - didn't touch existing code

   * mhflux/MHAlpha.[h,cc]:
     - added new functionality to support on-off analysis
     - replaced Fit() calls by newer function calls
     - added DrawAll - PRELIMINARY
     - fixed a bug when projecting - may be the reson for some strange
       crashes

   * mcalib/MCalibColorSet.cc:
     - fixed a stupid bug introduced last year, which caused MCalibColorSet
       in some circumstances to stop the eventloop when it shouldn't

   * mjobs/MSequence.cc:
     - expand path names