1 | #include <TROOT.h>
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2 | #include <TClass.h>
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3 | #include <TSystem.h>
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4 | #include <TGClient.h>
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5 | #include <TApplication.h>
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6 | #include <TObjectTable.h>
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7 |
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8 | #include "MLog.h"
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9 | #include "MLogManip.h"
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10 |
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11 | #include "MArgs.h"
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12 | #include "MArray.h"
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13 | #include "MDirIter.h"
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14 |
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15 | #include "MStatusDisplay.h"
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16 |
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17 | #include "MSequence.h"
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18 | #include "MJPedestal.h"
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19 | #include "MJCalibration.h"
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20 | #include "MJCalibrateSignal.h"
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21 | #include "MJCalibTest.h"
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22 |
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23 | using namespace std;
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24 |
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25 | static void StartUpMessage()
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26 | {
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27 | gLog << all << endl;
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28 |
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29 | // 1 2 3 4 5
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30 | // 12345678901234567890123456789012345678901234567890
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31 | gLog << "========================================================" << endl;
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32 | gLog << " Callisto - MARS V" << MARSVER << endl;
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33 | gLog << " MARS -- CALibrate LIght Signals and Time Offsets" << endl;
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34 | gLog << " Compiled on <" << __DATE__ << ">" << endl;
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35 | gLog << " Using ROOT v" << ROOTVER << endl;
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36 | gLog << "========================================================" << endl;
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37 | gLog << endl;
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38 | }
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39 |
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40 | static void Usage()
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41 | {
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42 | // 1 2 3 4 5 6 7 8
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43 | // 12345678901234567890123456789012345678901234567890123456789012345678901234567890
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44 | gLog << all << endl;
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45 | gLog << "Sorry the usage is:" << endl;
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46 | gLog << " callisto [-c] [-y] [options] sequence.txt" << endl << endl;
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47 | gLog << " Arguments:" << endl;
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48 | gLog << " sequence.txt: An ascii file defining a sequence of runs" << endl;
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49 | gLog << " Root Options:" << endl;
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50 | gLog << " -b Batch mode (no graphical output to screen)" << endl<<endl;
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51 | gLog << " Operation Modes:" << endl;
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52 | gLog << " -c Calculate the calibration constants" << endl;
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53 | gLog << " -y Extract and calibrate signal" << endl << endl;
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54 | gLog << " Options:" << endl;
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55 | gLog.Usage();
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56 | gLog << " --debug-env Debug setting resources from file" << endl;
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57 | gLog << " --debug-mem Debug memory usage" << endl << endl;
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58 | gLog << endl;
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59 | gLog << " -q Quit when job is finished" << endl;
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60 | gLog << " -f Force overwrite of existing files" << endl;
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61 | //gLog << " -ff Force execution if not all files found" << endl;
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62 | gLog << " --ind=path Path where to search for the data files" << endl;
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63 | gLog << " [default=standard path in datacenter]" << endl;
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64 | gLog << " --iny=path Path where to search for the calibration files" << endl;
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65 | gLog << " [default=local path or output path of Mode-C]" << endl;
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66 | gLog << " --outc=path Path to write Mode-C result to [def=local path]" << endl;
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67 | gLog << " --outy=path Path to write Mode-Y result to [def=local path]" << endl;
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68 | gLog << " --out=path Path to write the all results to [def=local path]" << endl;
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69 | gLog << " (overwrites --outc and --outy)" << endl;
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70 | gLog << " --path=path Path to write the all results to [def=local path]" << endl;
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71 | gLog << " (overwrites --iny, --outc and --outy)" << endl;
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72 | gLog << " --print-seq Print Sequence information" << endl;
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73 | gLog << " --print-files Print Files taken from Sequence" << endl;
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74 | gLog << " --print-only Do not execute anything except print" << endl;
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75 | gLog << " --use-test Apply cal. const. to the same cal. file (for testing)" << endl;
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76 | gLog << " --config=callisto.rc Resource file [default=callisto.rc]" << endl;
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77 | gLog << endl;
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78 | gLog << " -?, -h, --help This help" << endl << endl;
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79 | gLog << " Setup of the two jobs run by callisto (MJPedestal and MJCalibration)" << endl;
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80 | gLog << " can be done with the resource file. See MJPedestal and MJCalibration" << endl;
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81 | gLog << " especially CheckEnv() for more details. Command line options might" << endl;
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82 | gLog << " be overwritten by the resource file." << endl << endl;
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83 | gLog << " If running in Mode-C and Mode-Y --iny= is obsolete, instead --outc=" << endl;
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84 | gLog << " is used." << endl << endl;
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85 | gLog << " Using --iny=, --outc=, --outy=, --out= or --path= automatically" << endl;
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86 | gLog << " enables the corresponmding modes. In this case -c/-y are obsolete." << endl << endl;
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87 | gLog << "Description:" << endl;
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88 | gLog << " callisto will calculate pedestals from pedestal-files defined in a" << endl;
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89 | gLog << " sequence-file. This pedestals are used to calculate the calibration" << endl;
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90 | gLog << " contants. These constants are stored in a so called calibration-file" << endl;
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91 | gLog << " together with some datacheck plots which can be viewed using either" << endl;
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92 | gLog << " showplot or MStatusDisplay in the interpreter. A description of a" << endl;
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93 | gLog << " sequence-file can be found in the class reference of MSequence." << endl << endl;
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94 | gLog << "Example:" << endl;
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95 | gLog << " callisto -f --outc=mycal/ --outy=mysignal/ --log sequence02345.txt" << endl;
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96 | gLog << endl;
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97 | }
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98 |
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99 | int main(int argc, char **argv)
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100 | {
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101 | StartUpMessage();
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102 |
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103 | //
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104 | // Evaluate arguments
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105 | //
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106 | MArgs arg(argc, argv, kTRUE);
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107 |
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108 | if (arg.HasOnly("-?") || arg.HasOnly("-h") || arg.HasOnly("--help"))
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109 | {
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110 | Usage();
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111 | return -1;
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112 | }
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113 |
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114 | gLog.Setup(arg);
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115 |
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116 | const TString kConfig = arg.GetStringAndRemove("--config=", "callisto.rc");
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117 |
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118 | const Bool_t kPrintSeq = arg.HasOnlyAndRemove("--print-seq");
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119 | //const Bool_t kPrintFiles = arg.HasOnlyAndRemove("--print-files");
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120 | //const Bool_t kPrintOnly = arg.HasOnlyAndRemove("--print-only");
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121 | const Bool_t kUseTest = arg.HasOnlyAndRemove("--use-test");
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122 | const Bool_t kDebugEnv = arg.HasOnlyAndRemove("--debug-env");
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123 | const Bool_t kDebugMem = arg.HasOnlyAndRemove("--debug-mem");
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124 |
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125 | const Bool_t kQuit = arg.HasOnlyAndRemove("-q");
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126 | const Bool_t kBatch = arg.HasOnlyAndRemove("-b");
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127 | const Bool_t kOverwrite = arg.HasOnlyAndRemove("-f");
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128 | //const Bool_t kForceExec = arg.HasOnlyAndRemove("-ff");
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129 |
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130 | const TString kInpathD = arg.GetStringAndRemove("--ind=", "");
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131 | TString kInpathY = arg.GetStringAndRemove("--iny=", "");
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132 | TString kOutpathY = arg.GetStringAndRemove("--outy=", "");
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133 | TString kOutpathC = arg.GetStringAndRemove("--outc=", "");
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134 | const TString kOutpath = arg.GetStringAndRemove("--out=", "");
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135 | const TString kPath = arg.GetStringAndRemove("--path=", "");
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136 |
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137 | Bool_t kModeC = arg.HasOnlyAndRemove("-c");
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138 | Bool_t kModeY = arg.HasOnlyAndRemove("-y");
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139 |
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140 | if (!kInpathY.IsNull() || !kOutpathY.IsNull() || !kOutpath.IsNull() || !kPath.IsNull())
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141 | kModeY = kTRUE;
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142 | if (!kOutpathC.IsNull() || !kOutpath.IsNull() || !kPath.IsNull())
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143 | kModeC = kTRUE;
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144 |
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145 | if (!kModeC && !kModeY)
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146 | {
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147 | gLog << err << "Neither calibration (-c) nor signal extraction (-y) mode specified!" << endl;
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148 | Usage();
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149 | return 0;
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150 | }
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151 |
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152 | if (kModeC && kOutpathC.IsNull())
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153 | kOutpathC = ".";
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154 | if (kModeY)
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155 | {
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156 | if (kInpathY.IsNull())
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157 | kInpathY = ".";
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158 | if (kOutpathY.IsNull())
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159 | kOutpathY = ".";
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160 | }
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161 | if (!kOutpath.IsNull())
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162 | {
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163 | kOutpathC = kOutpath;
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164 | kOutpathY = kOutpath;
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165 | }
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166 | if (!kPath.IsNull())
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167 | {
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168 | kOutpathC = kOutpath;
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169 | kOutpathY = kOutpath;
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170 | kInpathY = kOutpath;
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171 | }
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172 |
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173 | if (kModeC && kModeY)
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174 | kInpathY = kOutpathC;
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175 |
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176 | if (arg.GetNumOptions()>0)
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177 | {
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178 | gLog << warn << "WARNING - Unknown commandline options..." << endl;
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179 | arg.Print("options");
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180 | gLog << endl;
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181 | }
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182 |
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183 | //
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184 | // check for the right usage of the program
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185 | //
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186 | if (arg.GetNumArguments()!=1)
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187 | {
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188 | Usage();
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189 | return -1;
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190 | }
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191 |
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192 | //
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193 | // Setup sequence file and check for its existance
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194 | //
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195 | const TString kSequence = arg.GetArgumentStr(0);
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196 |
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197 | if (gSystem->AccessPathName(kSequence, kFileExists))
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198 | {
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199 | gLog << err << "Sorry, sequence file '" << kSequence << "' doesn't exist." << endl;
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200 | return -1;
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201 | }
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202 |
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203 | if (kDebugMem)
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204 | TObject::SetObjectStat(kTRUE);
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205 |
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206 | //
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207 | // Setup sequence and check its validity
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208 | //
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209 | MSequence seq(kSequence);
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210 | if (kPrintSeq)
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211 | {
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212 | gLog << all;
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213 | gLog.Separator(kSequence);
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214 | seq.Print();
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215 | gLog << endl;
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216 | }
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217 | if (!seq.IsValid())
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218 | {
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219 | gLog << err << "Sequence read but not valid!" << endl << endl;
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220 | return -1;
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221 | }
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222 | /*
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223 | //
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224 | // Process print options
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225 | //
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226 | if (kPrintFiles)
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227 | {
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228 | MDirIter Next1, Next2, Next3;
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229 | seq.SetupPedRuns(Next1, kInpathD);
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230 | seq.SetupCalRuns(Next2, kInpathD);
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231 | seq.SetupDatRuns(Next3, kInpathD);
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232 |
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233 | gLog << all;
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234 | gLog.Separator("Pedestal Files");
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235 | Next1.Print("all");
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236 | gLog << endl;
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237 | gLog.Separator("Calibration Files");
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238 | Next2.Print("all");
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239 | gLog << endl;
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240 | gLog.Separator("Data Files");
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241 | Next3.Print("all");
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242 | gLog << endl;
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243 | }
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244 |
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245 | //
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246 | // Check for existance of all files
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247 | //
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248 | MDirIter iter;
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249 | const Int_t n0 = seq.SetupAllRuns(iter, kInpathD, "[DPC]");
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250 | const Int_t n1 = seq.GetNumAllRuns();
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251 | if (n0 != n1)
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252 | {
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253 | if (kForceExec)
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254 | gLog << warn << "WARNING";
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255 | else
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256 | gLog << err << "ERROR";
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257 | gLog << " - " << n1 << " files in sequence defined, but " << n0 << " found in ";
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258 | gLog << (kInpathD.IsNull() ? "<defaultpath>" : kInpathD.Data()) << endl;
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259 | if (!kForceExec)
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260 | return -1;
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261 | }
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262 |
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263 | if (kPrintOnly)
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264 | return 0;
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265 | */
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266 | //
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267 | // Initialize root
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268 | //
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269 | MArray::Class()->IgnoreTObjectStreamer();
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270 | MParContainer::Class()->IgnoreTObjectStreamer();
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271 |
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272 | TApplication app("Callisto", &argc, argv);
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273 | if (!gROOT->IsBatch() && !gClient || gROOT->IsBatch() && !kBatch)
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274 | {
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275 | gLog << err << "Bombing... maybe your DISPLAY variable is not set correctly!" << endl;
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276 | return 1;
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277 | }
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278 |
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279 | //
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280 | // Update frequency by default = 1Hz
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281 | //
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282 | MStatusDisplay *d = new MStatusDisplay;
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283 |
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284 | // From now on each 'Exit' means: Terminate the application
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285 | d->SetBit(MStatusDisplay::kExitLoopOnExit);
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286 | d->SetTitle(kSequence);
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287 |
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288 | if (kModeC)
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289 | {
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290 | //
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291 | // Calculate pedestal for pedestal-calculation and calibration
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292 | //
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293 | MJPedestal job1(Form("MJPedestalC1 #%d", seq.GetSequence()));
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294 | job1.SetNoStorage();
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295 | job1.SetSequence(seq);
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296 | job1.SetEnv(kConfig);
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297 | job1.SetEnvDebug(kDebugEnv);
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298 | job1.SetDisplay(d);
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299 | job1.SetOverwrite(kOverwrite);
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300 | job1.SetPathData(kInpathD);
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301 |
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302 | job1.SetExtractionFundamental();
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303 | // job1.SetPathOut(kOutpathC); // not yet needed
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304 | // job1.SetPathIn(kInpathC); // not yet needed
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305 |
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306 | if (!job1.ProcessFile())
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307 | {
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308 | gLog << err << "Calculation of pedestal failed." << endl << endl;
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309 | return -1;
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310 | }
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311 |
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312 | if (!job1.GetDisplay())
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313 | {
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314 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
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315 | return 1;
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316 | }
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317 |
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318 | //
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319 | // Calculate pedestal and pedestal resolution
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320 | //
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321 | MJPedestal job2(Form("MJPedestalC2 #%d", seq.GetSequence()));
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322 | job2.SetNoStorage();
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323 | job2.SetSequence(seq);
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324 | job2.SetEnv(kConfig);
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325 | job2.SetEnvDebug(kDebugEnv);
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326 | job2.SetDisplay(d);;
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327 | job2.SetOverwrite(kOverwrite);
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328 | job2.SetPathData(kInpathD);
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329 | // job1.SetPathOut(kOutpathC); // not yet needed
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330 | // job1.SetPathIn(kInpathC); // not yet needed
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331 |
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332 | //job2.SetExtractorResolution();
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333 | job2.SetExtractionWithExtractorRndm();
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334 | job2.SetExtractor(job1.GetExtractor());
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335 | job2.SetPedestals(job1.GetPedestalCam());
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336 | job2.SetBadPixels(job1.GetBadPixels());
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337 |
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338 | if (!job2.ProcessFile())
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339 | {
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340 | gLog << err << "Calculation of pedestal resolution failed." << endl << endl;
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341 | return -1;
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342 | }
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343 |
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344 | if (!job2.GetDisplay())
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345 | {
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346 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
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347 | return 1;
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348 | }
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349 |
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350 | //
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351 | // Do calibration
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352 | //
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353 | MJCalibration job3(Form("MJCalibration #%d", seq.GetSequence()));
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354 | job3.SetSequence(seq);
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355 | job3.SetEnv(kConfig);
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356 | job3.SetEnvDebug(kDebugEnv);
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357 | job3.SetDisplay(d);;
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358 | job3.SetOverwrite(kOverwrite);
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359 | job3.SetPathOut(kOutpathC);
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360 | job3.SetPathData(kInpathD);
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361 | // job2.SetPathIn(kInpathC); // not yet needed
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362 |
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363 | job3.SetBadPixels(job2.GetBadPixels());
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364 | job3.SetExtractor(job2.GetExtractor());
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365 | job3.SetExtractorCam(job2.GetPedestalCam());
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366 |
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367 | if (!job3.ProcessFile(job1.GetPedestalCam()))
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368 | {
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369 | gLog << err << "Calculation of calibration failed." << endl << endl;
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370 | return -1;
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371 | }
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372 |
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373 | if (!job3.GetDisplay())
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374 | {
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375 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
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376 | return 1;
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377 | }
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378 | MJCalibTest job4(Form("MJCalibTest #%d", seq.GetSequence()));
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379 | if (kUseTest)
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380 | {
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381 | job4.SetBadPixels(job3.GetBadPixels());
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382 | job4.SetSequence(seq);
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383 | job4.SetEnv(kConfig);
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384 | job4.SetEnvDebug(kDebugEnv);
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385 | job4.SetDisplay(d);;
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386 | job4.SetOverwrite(kOverwrite);
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387 | job4.SetPathOut(kOutpathC);
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388 | job4.SetPathData(kInpathD);
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389 | // job4.SetPathIn(kInpathC);
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390 |
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391 | if (!job4.ProcessFile(job1.GetPedestalCam()))
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392 | {
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393 | gLog << err << "Calculation of calibration failed." << endl << endl;
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394 | return -1;
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395 | }
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396 |
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397 | if (!job4.GetDisplay())
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398 | {
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399 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
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400 | return 1;
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401 | }
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402 | }
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403 | }
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404 |
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405 | if (kModeY)
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406 | {
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407 | d->Reset();
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408 |
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409 | //
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410 | // Calculate starting pedestal for data extraction
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411 | //
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412 | MJPedestal job1(Form("MJPedestalY1 #%d", seq.GetSequence()));
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413 | job1.SetNoStorage();
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414 | job1.SetSequence(seq);
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415 | job1.SetEnv(kConfig);
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416 | job1.SetEnvDebug(kDebugEnv);
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417 | job1.SetDisplay(d);
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418 | job1.SetNoDisplay();
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419 | job1.SetOverwrite(kOverwrite);
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420 | job1.SetPathData(kInpathD);
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421 | job1.SetPathIn(kInpathY);
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422 | //job1.SetPathOut(kOutpathY); // not yet needed
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423 | job1.SetUseData();
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424 | job1.SetExtractionFundamental();
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425 |
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426 | if (!job1.ProcessFile())
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427 | {
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428 | gLog << err << "Calculation of fundamental pedestal failed." << endl << endl;
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429 | return -1;
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430 | }
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431 |
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432 | if (!job1.GetDisplay())
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433 | {
|
---|
434 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
|
---|
435 | return 1;
|
---|
436 | }
|
---|
437 |
|
---|
438 | //
|
---|
439 | // Calculate pedestal and pedestal resolution
|
---|
440 | //
|
---|
441 | MJPedestal job2(Form("MJPedestalY2 #%d", seq.GetSequence()));
|
---|
442 | job2.SetNoStorage();
|
---|
443 | job2.SetSequence(seq);
|
---|
444 | job2.SetEnv(kConfig);
|
---|
445 | job2.SetEnvDebug(kDebugEnv);
|
---|
446 | job2.SetDisplay(d);
|
---|
447 | job2.SetNoDisplay();
|
---|
448 | job2.SetOverwrite(kOverwrite);
|
---|
449 | job2.SetPathData(kInpathD);
|
---|
450 | job2.SetPathIn(kInpathY);
|
---|
451 | // job1.SetPathOut(kOutpathC); // not yet needed
|
---|
452 | // job1.SetPathIn(kInpathC); // not yet needed
|
---|
453 |
|
---|
454 | job2.SetUseData();
|
---|
455 | job2.SetExtractionWithExtractor();
|
---|
456 | job2.SetExtractor(job1.GetExtractor());
|
---|
457 | job2.SetPedestals(job1.GetPedestalCam());
|
---|
458 | job2.SetBadPixels(job1.GetBadPixels());
|
---|
459 |
|
---|
460 | if (!job2.ProcessFile())
|
---|
461 | {
|
---|
462 | gLog << err << "Calculation of pedestal from extrtactor (random) failed." << endl << endl;
|
---|
463 | return -1;
|
---|
464 | }
|
---|
465 |
|
---|
466 | if (!job2.GetDisplay())
|
---|
467 | {
|
---|
468 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
|
---|
469 | return 1;
|
---|
470 | }
|
---|
471 |
|
---|
472 | //
|
---|
473 | // Calculate pedestal and pedestal resolution
|
---|
474 | //
|
---|
475 | MJPedestal job3(Form("MJPedestalY3 #%d", seq.GetSequence()));
|
---|
476 | job3.SetNoStorage();
|
---|
477 | job3.SetSequence(seq);
|
---|
478 | job3.SetEnv(kConfig);
|
---|
479 | job3.SetEnvDebug(kDebugEnv);
|
---|
480 | job3.SetDisplay(d);
|
---|
481 | job3.SetNoDisplay();
|
---|
482 | job3.SetOverwrite(kOverwrite);
|
---|
483 | job3.SetPathData(kInpathD);
|
---|
484 | job3.SetPathIn(kInpathY);
|
---|
485 | // job1.SetPathOut(kOutpathC); // not yet needed
|
---|
486 | // job1.SetPathIn(kInpathC); // not yet needed
|
---|
487 |
|
---|
488 | job3.SetUseData();
|
---|
489 | job3.SetExtractionWithExtractorRndm();
|
---|
490 | job3.SetExtractor(job1.GetExtractor());
|
---|
491 | job3.SetPedestals(job1.GetPedestalCam());
|
---|
492 | job3.SetBadPixels(job1.GetBadPixels());
|
---|
493 |
|
---|
494 | if (!job3.ProcessFile())
|
---|
495 | {
|
---|
496 | gLog << err << "Calculation of pedestal from extractor failed." << endl << endl;
|
---|
497 | return -1;
|
---|
498 | }
|
---|
499 |
|
---|
500 | if (!job3.GetDisplay())
|
---|
501 | {
|
---|
502 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
|
---|
503 | return 1;
|
---|
504 | }
|
---|
505 |
|
---|
506 | //
|
---|
507 | // Extract signal and calibrate it
|
---|
508 | //
|
---|
509 | MJCalibrateSignal job4(Form("MJCalibrateSignal #%d", seq.GetSequence()));
|
---|
510 | job4.SetSequence(seq);
|
---|
511 | job4.SetDisplay(d);;
|
---|
512 | job4.SetEnv(kConfig);
|
---|
513 | job4.SetEnvDebug(kDebugEnv);
|
---|
514 | job4.SetOverwrite(kOverwrite);
|
---|
515 | job4.SetPathIn(kInpathY);
|
---|
516 | job4.SetPathOut(kOutpathY);
|
---|
517 | job4.SetPathData(kInpathD);
|
---|
518 |
|
---|
519 | // Where to search for calibration files
|
---|
520 | if (!job4.ProcessFile(job1.GetPedestalCam(), job2.GetPedestalCam(), job3.GetPedestalCam()))
|
---|
521 | return -1;
|
---|
522 |
|
---|
523 | if (!job4.GetDisplay())
|
---|
524 | {
|
---|
525 | gLog << warn << "Display closed by user... execution aborted." << endl << endl;
|
---|
526 | return 1;
|
---|
527 | }
|
---|
528 | }
|
---|
529 |
|
---|
530 | if (kBatch || kQuit)
|
---|
531 | delete d;
|
---|
532 | else
|
---|
533 | {
|
---|
534 | // From now on each 'Close' means: Terminate the application
|
---|
535 | d->SetBit(MStatusDisplay::kExitLoopOnClose);
|
---|
536 |
|
---|
537 | // Wait until the user decides to exit the application
|
---|
538 | app.Run(kFALSE);
|
---|
539 | }
|
---|
540 |
|
---|
541 | if (TObject::GetObjectStat())
|
---|
542 | {
|
---|
543 | TObject::SetObjectStat(kFALSE);
|
---|
544 | gObjectTable->Print();
|
---|
545 | }
|
---|
546 |
|
---|
547 | return 0;
|
---|
548 | }
|
---|
549 |
|
---|