source: trunk/MagicSoft/Mars/callisto.cc@ 6914

Last change on this file since 6914 was 6906, checked in by tbretz, 19 years ago
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File size: 21.8 KB
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1#include <TROOT.h>
2#include <TClass.h>
3#include <TSystem.h>
4#include <TGClient.h>
5#include <TApplication.h>
6#include <TObjectTable.h>
7
8#include "MLog.h"
9#include "MLogManip.h"
10
11#include "MEnv.h"
12#include "MArgs.h"
13#include "MArray.h"
14#include "MDirIter.h"
15
16#include "MStatusDisplay.h"
17
18#include "MSequence.h"
19#include "MJPedestal.h"
20#include "MJCalibration.h"
21#include "MJCalibrateSignal.h"
22#include "MJCalibTest.h"
23
24using namespace std;
25
26static void StartUpMessage()
27{
28 gLog << all << endl;
29
30 // 1 2 3 4 5
31 // 12345678901234567890123456789012345678901234567890
32 gLog << "========================================================" << endl;
33 gLog << " Callisto - MARS V" << MARSVER << endl;
34 gLog << " MARS -- CALibrate LIght Signals and Time Offsets" << endl;
35 gLog << " Compiled on <" << __DATE__ << ">" << endl;
36 gLog << " Using ROOT v" << ROOTVER << endl;
37 gLog << "========================================================" << endl;
38 gLog << endl;
39}
40
41static void Usage()
42{
43 // 1 2 3 4 5 6 7 8
44 // 12345678901234567890123456789012345678901234567890123456789012345678901234567890
45 gLog << all << endl;
46 gLog << "Sorry the usage is:" << endl;
47 gLog << " callisto [-c] [-y] [options] sequence.txt" << endl << endl;
48 gLog << " Arguments:" << endl;
49 gLog << " sequence.txt: Ascii file defining a sequence of runs" << endl;
50 gLog << " For more details see MSequence" << endl;
51 gLog << " Root Options:" << endl;
52 gLog << " -b Batch mode (no graphical output to screen)" << endl<<endl;
53 gLog << " Operation Modes:" << endl;
54 gLog << " -c Calculate the calibration constants" << endl;
55 gLog << " -y Extract and calibrate signal" << endl << endl;
56 gLog << " Data Type (exclusive):" << endl;
57 gLog << " -raw Read input from raw-data" << endl;
58 gLog << " -mc Input root-files are monte carlo files" << endl;
59 gLog << " -root Read input from root-files (merpped) <default>" << endl << endl;
60 gLog << " Options:" << endl;
61 gLog.Usage();
62 gLog << " --debug-env=0 Disable debugging setting resources <default>" << endl;
63 gLog << " --debug-env[=1] Display untouched resources after program execution" << endl;
64 gLog << " --debug-env=2 Display untouched resources after eventloop setup" << endl;
65 gLog << " --debug-env=3 Debug setting resources from resource file" << endl;
66 gLog << " --debug-mem Debug memory usage" << endl << endl;
67 gLog << endl;
68 gLog << " -q Quit when job is finished" << endl;
69 gLog << " -f Force overwrite of existing files" << endl;
70 gLog << " --ind=path Path where to search for the data files" << endl;
71 gLog << " [default=standard path in datacenter]" << endl;
72 gLog << " --iny=path Path where to search for the calibration files" << endl;
73 gLog << " [default=local path or output path of Mode-C]" << endl;
74 gLog << " --outc=path Path to write Mode-C result to [def=local path]" << endl;
75 gLog << " --outy=path Path to write Mode-Y result to [def=local path]" << endl;
76 gLog << " --out=path Path to write the all results to [def=local path]" << endl;
77 gLog << " (overwrites --outc and --outy)" << endl;
78 gLog << " --path=path Path to write the all results to [def=local path]" << endl;
79 gLog << " (overwrites --iny, --outc and --outy)" << endl;
80 gLog << " --print-seq Print Sequence information" << endl;
81 gLog << " --print-files Print Files taken from Sequence" << endl;
82 gLog << " --print-found Print Files found from Sequence" << endl;
83 gLog << " --use-test Apply calibration constants to same calibration" << endl;
84 gLog << " file (for testing, calibration mode only)" << endl;
85 gLog << " --moon Force using pedestal fits instead of calculated RMS" << endl;
86 gLog << " --config=callisto.rc Resource file [default=callisto.rc]" << endl;
87 gLog << endl;
88 gLog << " --version, -V Show startup message with version number" << endl;
89 gLog << " -?, -h, --help This help" << endl << endl;
90 gLog << " Setup of the two jobs run by callisto (MJPedestal and MJCalibration)" << endl;
91 gLog << " can be done with the resource file. See MJPedestal and MJCalibration" << endl;
92 gLog << " especially CheckEnv() for more details. Command line options might" << endl;
93 gLog << " be overwritten by the resource file." << endl << endl;
94 gLog << " If running in Mode-C and Mode-Y --iny= is obsolete, instead --outc=" << endl;
95 gLog << " is used." << endl << endl;
96 gLog << " Using --iny=, --outc=, --outy=, --out= or --path= automatically" << endl;
97 gLog << " enables the corresponmding modes. In this case -c/-y are obsolete." << endl << endl;
98 gLog << "Description:" << endl;
99 gLog << " callisto will calculate pedestals from pedestal-files defined in a" << endl;
100 gLog << " sequence-file. This pedestals are used to calculate the calibration" << endl;
101 gLog << " contants. These constants are stored in a so called calibration-file" << endl;
102 gLog << " together with some datacheck plots which can be viewed using either" << endl;
103 gLog << " showplot or MStatusDisplay in the interpreter. A description of a" << endl;
104 gLog << " sequence-file can be found in the class reference of MSequence." << endl << endl;
105 gLog << "Background:" << endl;
106 gLog << " Callisto is a large, icy, dark-colored, low-density outer moon of" << endl;
107 gLog << " Jupiter that is scarred with impact craters and ejecta. It has a" << endl;
108 gLog << " diameter of about 4800km, the second-largest moon of Jupiter; it is" << endl;
109 gLog << " roughly the size of Mercury. Callisto has the largest-known impact" << endl;
110 gLog << " crater in the Solar System, Valhalla, which has a bright patch 600km" << endl;
111 gLog << " across and rings that go out to almost 3000km. Callisto orbits" << endl;
112 gLog << " Jupiter at a mean distance of 1,883,000km. Its mass is 1.1e23 kg. It" << endl;
113 gLog << " takes Callisto 16.7 days to orbit Jupiter in a synchronous orbit." << endl;
114 gLog << " Jupiter's moon Callisto was discovered independantly by Galileo and" << endl;
115 gLog << " S.Marius in 1610." << endl << endl;
116 gLog << "Example:" << endl;
117 gLog << " callisto -f --outc=mycal/ --outy=mysignal/ --log sequence02345.txt" << endl;
118 gLog << endl;
119}
120
121static void PrintFiles(const MSequence &seq, const TString &kInpathD, Bool_t raw, Bool_t all)
122{
123 const char *prep = all ? "Found" : "Scheduled";
124
125 MDirIter Next1, Next2, Next3;
126 seq.SetupPedRuns(Next1, kInpathD, raw);
127 seq.SetupCalRuns(Next2, kInpathD, raw);
128 seq.SetupDatRuns(Next3, kInpathD, raw);
129
130 gLog << all;
131 gLog.Separator(Form("%s Pedestal Files", prep));
132 Next1.Print(all?"all":"");
133 gLog << endl;
134 gLog.Separator(Form("%s Calibration Files", prep));
135 Next2.Print(all?"all":"");
136 gLog << endl;
137 gLog.Separator(Form("%s Data Files", prep));
138 Next3.Print(all?"all":"");
139 gLog << endl;
140}
141
142int main(int argc, char **argv)
143{
144 StartUpMessage();
145
146 //
147 // Evaluate arguments
148 //
149 MArgs arg(argc, argv, kTRUE);
150
151 if (arg.HasOnly("-V") || arg.HasOnly("--version"))
152 return 0;
153
154 if (arg.HasOnly("-?") || arg.HasOnly("-h") || arg.HasOnly("--help"))
155 {
156 Usage();
157 return 2;
158 }
159
160 gLog.Setup(arg);
161
162 const TString kConfig = arg.GetStringAndRemove("--config=", "callisto.rc");
163
164 const Bool_t kPrintSeq = arg.HasOnlyAndRemove("--print-seq");
165 const Bool_t kPrintFiles = arg.HasOnlyAndRemove("--print-files");
166 const Bool_t kPrintFound = arg.HasOnlyAndRemove("--print-found");
167 const Bool_t kUseTest = arg.HasOnlyAndRemove("--use-test");
168 const Bool_t kDebugMem = arg.HasOnlyAndRemove("--debug-mem");
169 Bool_t kMoon = arg.HasOnlyAndRemove("--moon");
170 Int_t kDebugEnv = arg.HasOnlyAndRemove("--debug-env") ? 1 : 0;
171 kDebugEnv = arg.GetIntAndRemove("--debug-env=", kDebugEnv);
172
173 const Bool_t kQuit = arg.HasOnlyAndRemove("-q");
174 const Bool_t kBatch = arg.HasOnlyAndRemove("-b");
175 const Bool_t kOverwrite = arg.HasOnlyAndRemove("-f");
176 //const Bool_t kForceExec = arg.HasOnlyAndRemove("-ff");
177
178 const TString kInpathD = arg.GetStringAndRemove("--ind=", "");
179 TString kInpathY = arg.GetStringAndRemove("--iny=", "");
180 TString kOutpathY = arg.GetStringAndRemove("--outy=", "");
181 TString kOutpathC = arg.GetStringAndRemove("--outc=", "");
182 const TString kOutpath = arg.GetStringAndRemove("--out=", "");
183 const TString kPath = arg.GetStringAndRemove("--path=", "");
184
185 Bool_t kModeC = arg.HasOnlyAndRemove("-c");
186 Bool_t kModeY = arg.HasOnlyAndRemove("-y");
187
188 MJCalib::DataType_t kDataType = MJCalib::kIsUseRootData; // root
189 if (arg.HasOnlyAndRemove("-raw"))
190 kDataType = MJCalib::kIsUseRawData; // raw
191 if (arg.HasOnlyAndRemove("-mc"))
192 kDataType = MJCalib::kIsUseMC; // monte carlo
193
194 if (!kInpathY.IsNull() || !kOutpathY.IsNull() || !kOutpath.IsNull() || !kPath.IsNull())
195 kModeY = kTRUE;
196 if (!kOutpathC.IsNull() || !kOutpath.IsNull() || !kPath.IsNull())
197 kModeC = kTRUE;
198
199 if (!kModeC && !kModeY /*&& !kUseTest*/)
200 {
201 gLog << err << "Neither calibration (-c) nor signal extraction (-y) or test-mode (--use-test) specified!" << endl;
202 Usage();
203 return 2;
204 }
205
206 if ((kModeC/* || kUseTest*/) && kOutpathC.IsNull())
207 kOutpathC = ".";
208 if (kModeY)
209 {
210 if (kInpathY.IsNull())
211 kInpathY = ".";
212 if (kOutpathY.IsNull())
213 kOutpathY = ".";
214 }
215 if (!kOutpath.IsNull())
216 {
217 kOutpathC = kOutpath;
218 kOutpathY = kOutpath;
219 }
220 if (!kPath.IsNull())
221 {
222 kOutpathC = kOutpath;
223 kOutpathY = kOutpath;
224 kInpathY = kOutpath;
225 }
226
227 if (kModeC && kModeY)
228 kInpathY = kOutpathC;
229
230 if (arg.GetNumOptions()>0)
231 {
232 gLog << warn << "WARNING - Unknown commandline options..." << endl;
233 arg.Print("options");
234 gLog << endl;
235 return 2;
236 }
237
238 //
239 // check for the right usage of the program
240 //
241 if (arg.GetNumArguments()!=1)
242 {
243 Usage();
244 return 2;
245 }
246
247 //
248 // Setup sequence file and check for its existance
249 //
250 const TString kSequence = arg.GetArgumentStr(0);
251
252 if (gSystem->AccessPathName(kSequence, kFileExists))
253 {
254 gLog << err << "Sorry, sequence file '" << kSequence << "' doesn't exist." << endl;
255 return 2;
256 }
257
258 if (gSystem->AccessPathName(kConfig, kFileExists))
259 {
260 gLog << err << "Sorry, config file '" << kConfig << "' doesn't exist." << endl;
261 return 2;
262 }
263
264 if (kDebugMem)
265 TObject::SetObjectStat(kTRUE);
266
267 //
268 // Setup sequence and check its validity
269 //
270 MSequence seq(kSequence);
271 if (kPrintSeq)
272 {
273 gLog << all;
274 gLog.Separator(kSequence);
275 seq.Print();
276 gLog << endl;
277 }
278 if (!seq.IsValid())
279 {
280 gLog << err << "Sequence read but not valid!" << endl << endl;
281 return 2;
282 }
283
284 //
285 // Process print options
286 //
287 if (kPrintFiles)
288 PrintFiles(seq, kInpathD, kDataType==MJCalib::kIsUseRawData, kFALSE);
289 if (kPrintFound)
290 PrintFiles(seq, kInpathD, kDataType==MJCalib::kIsUseRawData, kTRUE);
291
292 if (seq.HasMoon())
293 kMoon = kTRUE;
294
295
296 /*
297 //
298 // Check for existance of all files
299 //
300 MDirIter iter;
301 const Int_t n0 = seq.SetupAllRuns(iter, kInpathD, "[DPC]");
302 const Int_t n1 = seq.GetNumAllRuns();
303 if (n0 != n1)
304 {
305 if (kForceExec)
306 gLog << warn << "WARNING";
307 else
308 gLog << err << "ERROR";
309 gLog << " - " << n1 << " files in sequence defined, but " << n0 << " found in ";
310 gLog << (kInpathD.IsNull() ? "<defaultpath>" : kInpathD.Data()) << endl;
311 if (!kForceExec)
312 return 2;
313 }
314
315 if (kPrintOnly)
316 return 0;
317 */
318 //
319 // Initialize root
320 //
321 MArray::Class()->IgnoreTObjectStreamer();
322 MParContainer::Class()->IgnoreTObjectStreamer();
323
324 TApplication app("Callisto", &argc, argv);
325 if (!gROOT->IsBatch() && !gClient || gROOT->IsBatch() && !kBatch)
326 {
327 gLog << err << "Bombing... maybe your DISPLAY variable is not set correctly!" << endl;
328 return 1;
329 }
330
331 //
332 // Update frequency by default = 1Hz
333 //
334 MStatusDisplay *d = new MStatusDisplay;
335
336 // From now on each 'Exit' means: Terminate the application
337 d->SetBit(MStatusDisplay::kExitLoopOnExit);
338 d->SetTitle(kSequence);
339
340 MEnv env(kConfig);
341 if (kModeC/* || kUseTest*/)
342 {
343 //
344 // Calculate pedestal for pedestal-calculation and calibration
345 //
346 MJPedestal job1(Form("MJPedestalC1 #%d", seq.GetSequence()));
347 job1.SetNoStorage();
348 job1.SetSequence(seq);
349 job1.SetEnv(&env);
350 job1.SetEnvDebug(kDebugEnv);
351 job1.SetDisplay(d);
352 job1.SetOverwrite(kOverwrite);
353 job1.SetPathData(kInpathD);
354 job1.SetDataType(kDataType);
355 job1.SetUseHists(kMoon);
356
357
358 job1.SetExtractionFundamental();
359 // job1.SetPathOut(kOutpathC); // not yet needed
360 // job1.SetPathIn(kInpathC); // not yet needed
361
362 if (!job1.ProcessFile())
363 {
364 gLog << err << "Calculation of pedestal failed." << endl << endl;
365 return 2;
366 }
367
368 if (!job1.GetDisplay())
369 {
370 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
371 return 1;
372 }
373
374 //
375 // Calculate pedestal and pedestal resolution
376 //
377 MJPedestal job2(Form("MJPedestalC2 #%d", seq.GetSequence()));
378 job2.SetNoStorage();
379 job2.SetSequence(seq);
380 job2.SetEnv(&env);
381 job2.SetEnvDebug(kDebugEnv);
382 job2.SetDisplay(d);;
383 job2.SetOverwrite(kOverwrite);
384 job2.SetPathData(kInpathD);
385 job2.SetDataType(kDataType);
386 job2.SetUseHists(kMoon);
387 // job1.SetPathOut(kOutpathC); // not yet needed
388 // job1.SetPathIn(kInpathC); // not yet needed
389
390 //job2.SetExtractorResolution();
391 job2.SetExtractionWithExtractorRndm();
392 job2.SetExtractor(job1.GetExtractor());
393 job2.SetPedestals(job1.GetPedestalCam());
394 job2.SetBadPixels(job1.GetBadPixels());
395
396 if (!job2.ProcessFile())
397 {
398 gLog << err << "Calculation of pedestal resolution failed." << endl << endl;
399 return 2;
400 }
401
402 if (!job2.GetDisplay())
403 {
404 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
405 return 1;
406 }
407
408 //
409 // Do calibration
410 //
411 MJCalibration job3(Form("MJCalibration #%d", seq.GetSequence()));
412 job3.SetSequence(seq);
413 job3.SetEnv(&env);
414 job3.SetEnvDebug(kDebugEnv);
415 job3.SetDisplay(d);
416 job3.SetOverwrite(kOverwrite);
417 job3.SetPathOut(kOutpathC);
418 job3.SetPathData(kInpathD);
419 job3.SetDataType(kDataType);
420 // job2.SetPathIn(kInpathC); // not yet needed
421
422 job3.SetBadPixels(job2.GetBadPixels());
423 job3.SetExtractor(job2.GetExtractor());
424 job3.SetExtractorCam(job2.GetPedestalCam());
425
426 if (!job3.ProcessFile(job1.GetPedestalCam()))
427 {
428 gLog << err << "Calculation of calibration failed." << endl << endl;
429 return 2;
430 }
431
432 if (kDebugEnv>0)
433 env.PrintUntouched();
434
435 if (!job3.GetDisplay())
436 {
437 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
438 return 1;
439 }
440
441 if (kUseTest)
442 {
443 MJCalibTest job4(Form("MJCalibTest #%d", seq.GetSequence()));
444 job4.SetBadPixels(job2.GetBadPixels());
445 job4.SetSequence(seq);
446 job4.SetEnv(&env);
447 job4.SetEnvDebug(kDebugEnv);
448 job4.SetDisplay(d);;
449 job4.SetOverwrite(kOverwrite);
450 job4.SetPathOut(kOutpathC);
451 job4.SetPathData(kInpathD);
452 job4.SetDataType(kDataType);
453
454 if (!job4.ProcessFile(job1.GetPedestalCam()))
455 {
456 gLog << err << "Calibration of calibration failed." << endl << endl;
457 return 2;
458 }
459
460 if (kDebugEnv>0)
461 env.PrintUntouched();
462
463 if (!job4.GetDisplay())
464 {
465 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
466 return 1;
467 }
468 }
469 }
470
471 if (kModeY)
472 {
473 d->Reset();
474
475 //
476 // Calculate starting pedestal for data extraction
477 //
478 MJPedestal job1(Form("MJPedestalY1 #%d", seq.GetSequence()));
479 job1.SetNoStorage();
480 job1.SetSequence(seq);
481 job1.SetEnv(&env);
482 job1.SetEnvDebug(kDebugEnv);
483 job1.SetDisplay(d);
484 job1.SetNoDisplay();
485 job1.SetOverwrite(kOverwrite);
486 job1.SetPathData(kInpathD);
487 job1.SetPathIn(kInpathY);
488 job1.SetDataType(kDataType);
489 //job1.SetPathOut(kOutpathY); // not yet needed
490 job1.SetUseData();
491 job1.SetExtractionFundamental();
492 job1.SetUseHists(kMoon);
493
494 if (!job1.ProcessFile())
495 {
496 gLog << err << "Calculation of fundamental pedestal failed." << endl << endl;
497 return 2;
498 }
499
500 if (!job1.GetDisplay())
501 {
502 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
503 return 1;
504 }
505
506 //
507 // Calculate pedestal and pedestal resolution
508 //
509 MJPedestal job2(Form("MJPedestalY2 #%d", seq.GetSequence()));
510 job2.SetNoStorage();
511 job2.SetSequence(seq);
512 job2.SetEnv(&env);
513 job2.SetEnvDebug(kDebugEnv);
514 job2.SetDisplay(d);
515 job2.SetNoDisplay();
516 job2.SetOverwrite(kOverwrite);
517 job2.SetPathData(kInpathD);
518 job2.SetPathIn(kInpathY);
519 job2.SetDataType(kDataType);
520 job2.SetPulsePosCheck(kDataType!=MJCalib::kIsUseMC);
521 job2.SetPathOut(kOutpathY); // for updating the extractor
522
523 job2.SetUseData();
524 job2.SetExtractionWithExtractor();
525 job2.SetExtractor(job1.GetExtractor());
526 job2.SetPedestals(job1.GetPedestalCam());
527 job2.SetBadPixels(job1.GetBadPixels());
528 job2.SetUseHists(kMoon);
529
530 if (!job2.ProcessFile())
531 {
532 gLog << err << "Calculation of pedestal from extrtactor (random) failed." << endl << endl;
533 return 2;
534 }
535
536 if (!job2.GetDisplay())
537 {
538 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
539 return 1;
540 }
541
542 //
543 // Calculate pedestal and pedestal resolution
544 //
545 MJPedestal job3(Form("MJPedestalY3 #%d", seq.GetSequence()));
546 job3.SetNoStorage();
547 job3.SetSequence(seq);
548 job3.SetEnv(&env);
549 job3.SetEnvDebug(kDebugEnv);
550 job3.SetDisplay(d);
551 job3.SetNoDisplay();
552 job3.SetOverwrite(kOverwrite);
553 job3.SetPathData(kInpathD);
554 job3.SetPathIn(kInpathY);
555 job3.SetDataType(kDataType);
556 // job1.SetPathOut(kOutpathC); // not yet needed
557 // job1.SetPathIn(kInpathC); // not yet needed
558
559 job3.SetUseData();
560 job3.SetExtractionWithExtractorRndm();
561 job3.SetExtractor(job1.GetExtractor());
562 job3.SetPedestals(job1.GetPedestalCam());
563 job3.SetBadPixels(job1.GetBadPixels());
564 job3.SetUseHists(kMoon);
565
566 if (!job3.ProcessFile())
567 {
568 gLog << err << "Calculation of pedestal from extractor failed." << endl << endl;
569 return 2;
570 }
571
572 if (!job3.GetDisplay())
573 {
574 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
575 return 1;
576 }
577
578 //
579 // Extract signal and calibrate it
580 //
581 MJCalibrateSignal job4(Form("MJCalibrateSignal #%d", seq.GetSequence()));
582 job4.SetSequence(seq);
583 job4.SetDisplay(d);;
584 job4.SetEnv(&env);
585 job4.SetEnvDebug(kDebugEnv);
586 job4.SetOverwrite(kOverwrite);
587 job4.SetPathIn(kInpathY);
588 job4.SetPathOut(kOutpathY);
589 job4.SetPathData(kInpathD);
590 job4.SetDataType(kDataType);
591 if (kDataType!=MJCalib::kIsUseMC)
592 job4.SetExtractor(job2.GetExtractor());
593
594 // Where to search for calibration files
595 if (!job4.ProcessFile(job1.GetPedestalCam(), job2.GetPedestalCam(), job3.GetPedestalCam()))
596 return 2;
597
598 if (kDebugEnv>0)
599 env.PrintUntouched();
600
601 if (!job4.GetDisplay())
602 {
603 gLog << warn << "Display closed by user... execution aborted." << endl << endl;
604 return 1;
605 }
606 }
607
608 if (kBatch || kQuit)
609 delete d;
610 else
611 {
612 // From now on each 'Close' means: Terminate the application
613 d->SetBit(MStatusDisplay::kExitLoopOnClose);
614
615 // Wait until the user decides to exit the application
616 app.Run(kFALSE);
617 }
618
619 if (TObject::GetObjectStat())
620 {
621 TObject::SetObjectStat(kFALSE);
622 gObjectTable->Print();
623 }
624
625 return 0;
626}
627
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