| 1 |
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| 2 | # ==========================================================================
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| 3 | #############################################################################
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| 4 | # ==========================================================================
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| 5 | # General
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| 6 | # ==========================================================================
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| 7 | #############################################################################
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| 8 | # ==========================================================================
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| 9 |
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| 10 | # -------------------------------------------------------------------------
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| 11 | # Use this if you want to setup the logging stream for the jobs
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| 12 | # (overwrites command line options)
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| 13 | # -------------------------------------------------------------------------
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| 14 | #MLog.VerbosityLevel: 2
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| 15 | #MLog.DebugLevel: 1
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| 16 | #MLog.NoColors: yes
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| 17 |
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| 18 | # ==========================================================================
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| 19 | #############################################################################
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| 20 | # ==========================================================================
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| 21 | # Calibration
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| 22 | # ==========================================================================
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| 23 | #############################################################################
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| 24 | # ==========================================================================
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| 25 |
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| 26 | # -------------------------------------------------------------------------
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| 27 | # Use this if you want to write the MJPedestal output somewhere
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| 28 | # If you don't want it, it is written to the calibration output anyhow.
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| 29 | # -------------------------------------------------------------------------
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| 30 | #MJPedestalC1.PathOut: .
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| 31 | #MJPedestalC2.PathOut: .
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| 32 | #MJPedestalC1.ReferenceFile: mjobs/pedestalref.rc
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| 33 | #MJPedestalC2.ReferenceFile: mjobs/pedestalref.rc
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| 34 |
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| 35 | # -------------------------------------------------------------------------
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| 36 | # Use this to define where the calibration output is stored. The filename
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| 37 | # is created from the sequence number. If nothing is specified '.' is
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| 38 | # assumed. (overwrites command line options)
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| 39 | # -------------------------------------------------------------------------
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| 40 | #MJCalibration.PathOut: calped
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| 41 |
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| 42 | # -------------------------------------------------------------------------
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| 43 | # Use this to define where the program should search for the pedestal
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| 44 | # and calibration files defined in the sequence. To use the local
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| 45 | # directory use '.' If nothing is specified the default path in the
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| 46 | # datacenter is used. (overwrites command line options)
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| 47 | # -------------------------------------------------------------------------
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| 48 | #MJPedestalC1.PathData: /data/MAGIC/Period016/
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| 49 | #MJPedestalC2.PathData: /data/MAGIC/Period016/
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| 50 | #MJCalibration.PathData: /data/MAGIC/Period016/
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| 51 |
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| 52 | # -------------------------------------------------------------------------
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| 53 | # Define here which signal extractor you are going to use for the
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| 54 | # whole calibration chain
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| 55 | # -------------------------------------------------------------------------
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| 56 | MJPedestalC1.ExtractSignal: MExtractTimeAndChargeDigitalFilter
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| 57 |
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| 58 | # -------------------------------------------------------------------------
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| 59 | # In the case of the Digital filter you have to overwrite the default
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| 60 | # weights file depending on what you are extracting
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| 61 | # -------------------------------------------------------------------------
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| 62 | MJPedestalC2.ExtractSignal.WeightsFile: msignal/calibration_weights_UV.dat
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| 63 | MJPedestalY2.ExtractSignal.WeightsFile: msignal/cosmics_weights.dat
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| 64 | MJPedestalY3.ExtractSignal.WeightsFile: msignal/cosmics_weights.dat
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| 65 | MJCalibration.ExtractSignal.WeightsFile: msignal/calibration_weights_UV.dat
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| 66 | MJCalibrateSignal.ExtractSignal.WeightsFile: msignal/cosmics_weights.dat
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| 67 | MJCalibrateSignal.ExtractInterlaced.WeightsFile: msignal/calibration_weights_UV.dat
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| 68 |
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| 69 | # -------------------------------------------------------------------------
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| 70 | # Configure MJCalibration
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| 71 | # -------------------------------------------------------------------------
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| 72 | # Switch on relative time calibration
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| 73 | #MJCalibration.RelTimeCalibration: Yes
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| 74 | # Switch on intensity calibration
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| 75 | #MJCalibration.IntensityCalibration: Yes
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| 76 | # Set color to be used
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| 77 | #MJCalibration.Color:
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| 78 | # Type of displayed plots
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| 79 | #MJCalibration.Display: Full,DataCheck,Normal
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| 80 | # Used for data-check (eg. raw files are read)
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| 81 | #MJCalibration.DataCheck: No
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| 82 | # Write additinal debug output
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| 83 | #MJCalibration.Debug: No
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| 84 | # Use blind pixel
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| 85 | #MJCalibration.UseBlindPixel: No
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| 86 | # Use pin diode
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| 87 | #MJCalibration.UsePINDiode: No
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| 88 |
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| 89 | # -------------------------------------------------------------------------
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| 90 | # You can choose the pedestal extraction algorithm/task. To use
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| 91 | # MPedCalcPedRun use the lines below. Be carefull, a pedestal file
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| 92 | # could be (if no pedestal file available) a data-file, too.
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| 93 | # -------------------------------------------------------------------------
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| 94 | #MJPedestalC1.ExtractPedestal: MPedCalcPedRun
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| 95 | #MJPedestalC1.ExtractPedestal.ExtractWinFirst: 0
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| 96 | #MJPedestalC1.ExtractPedestal.ExtractWinSize: 6
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| 97 | #MJPedestalC1.ExtractPedestal.PedestalUpdate: no
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| 98 | #MJPedestalC1.ExtractPedestal.CheckWinFirst: 0
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| 99 | #MJPedestalC1.ExtractPedestal.CheckWinSize: 29
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| 100 |
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| 101 | #MJPedestalC2.ExtractPedestal: MPedCalcPedRun
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| 102 | #MJPedestalC2.ExtractPedestal.ExtractWinFirst: 0
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| 103 | #MJPedestalC2.ExtractPedestal.ExtractWinSize: 6
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| 104 | #MJPedestalC2.ExtractPedestal.PedestalUpdate: no
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| 105 | #MJPedestalC2.ExtractPedestal.CheckWinFirst: 0
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| 106 | #MJPedestalC2.ExtractPedestal.CheckWinSize: 29
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| 107 |
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| 108 | # -------------------------------------------------------------------------
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| 109 | # You can choose the pedestal extraction algorithm/task. To use
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| 110 | # MPedCalcFromLoGain use the lines below. Be carefull, a pedestal file
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| 111 | # could be (if no pedestal file available) a data-file, too.
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| 112 | # -------------------------------------------------------------------------
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| 113 | #MJPedestalC1.ExtractPedestal: MPedCalcFromLoGain
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| 114 | #MJPedestalC1.ExtractPedestal.ExtractWinFirst: 0
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| 115 | #MJPedestalC1.ExtractPedestal.ExtractWinSize: 6
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| 116 | #MJPedestalC1.ExtractPedestal.PedestalUpdate: no
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| 117 | #MJPedestalC1.ExtractPedestal.CheckWinFirst: 0
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| 118 | #MJPedestalC1.ExtractPedestal.CheckWinSize: 29
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| 119 | #MJPedestalC1.ExtractPedestal.MaxHiGainVar: 40
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| 120 |
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| 121 | #MJPedestalC2.ExtractPedestal: MPedCalcFromLoGain
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| 122 | #MJPedestalC2.ExtractPedestal.ExtractWinFirst: 0
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| 123 | #MJPedestalC2.ExtractPedestal.ExtractWinSize: 6
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| 124 | #MJPedestalC2.ExtractPedestal.PedestalUpdate: no
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| 125 | #MJPedestalC2.ExtractPedestal.CheckWinFirst: 0
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| 126 | #MJPedestalC2.ExtractPedestal.CheckWinSize: 29
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| 127 | #MJPedestalC2.ExtractPedestal.MaxHiGainVar: 40
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| 128 |
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| 129 | # -------------------------------------------------------------------------
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| 130 | # Configure MJPedestalC1 and MJPedestalC2
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| 131 | # -------------------------------------------------------------------------
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| 132 | # Used for data-check (eg. raw files are read)
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| 133 | #MJPedestalC1.DataCheck: No
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| 134 | #MJPedestalC2.DataCheck: No
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| 135 | # Maximum number of event processed in the loop
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| 136 | #MJPedestalC1.MaxEvents: 1000
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| 137 | #MJPedestalC2.MaxEvents: 1000
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| 138 | # Allow to overwrite existing files with the output file
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| 139 | #MJPedestalC1.AllowOverwrite: No
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| 140 | #MJPedestalC2.AllowOverwrite: No
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| 141 | # Use data runs from the sequence instead of calibration runs
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| 142 | #MJPedestalC1.UseData: No
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| 143 | #MJPedestalC2.UseData: No
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| 144 |
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| 145 |
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| 146 | # -------------------------------------------------------------------------
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| 147 | # Use this if you want to change the signal extractor for the calibration
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| 148 | # and automatically the data extraction
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| 149 | # -------------------------------------------------------------------------
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| 150 | #MJCalibration.ExtractSignal: MExtractFixedWindow
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| 151 | #MJCalibration.ExtractSignal.HiGainFirst: 3
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| 152 | #MJCalibration.ExtractSignal.HiGainLast: 14
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| 153 | #MJCalibration.ExtractSignal.LoGainFirst: 4
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| 154 | #MJCalibration.ExtractSignal.LoGainLast: 13
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| 155 | #MJCalibration.ExtractSignal.HiGainWindowSize: 6
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| 156 | #MJCalibration.ExtractSignal.LoGainWindowSize: 6
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| 157 | #MJCalibration.ExtractSignal.PeakSearchWindow: 4
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| 158 | #MJCalibration.ExtractSignal.OffsetFromWindow: 1
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| 159 | #MJCalibration.ExtractSignal.LoGainPeakShift: 0
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| 160 | MJCalibration.ExtractSignal.LoGainSwitch: 200
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| 161 |
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| 162 | # -------------------------------------------------------------------------
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| 163 | # Use this if you want to change the time extractor for the calibration
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| 164 | # and automatically the data extraction
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| 165 | # -------------------------------------------------------------------------
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| 166 | #MJCalibration.ExtractTime: <dummy>
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| 167 | #MJCalibration.ExtractTime: MExtractTimeFastSpline
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| 168 | #MJCalibration.ExtractTime.HiGainFirst: 0
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| 169 | #MJCalibration.ExtractTime.HiGainLast: 7
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| 170 | #MJCalibration.ExtractTime.LoGainFirst: 3
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| 171 | #MJCalibration.ExtractTime.LoGainLast: 8
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| 172 | #MJCalibration.ExtractTime.WindowSizeHiGain: 6
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| 173 | #MJCalibration.ExtractTime.WindowSizeLoGain: 6
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| 174 | #MJCalibration.ExtractTime.OffsetLoGain: 1.51
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| 175 |
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| 176 | # -------------------------------------------------------------------------
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| 177 | # Use this to change the behaviour of the calibration
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| 178 | # -------------------------------------------------------------------------
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| 179 | #MJCalibration.MCalibrationChargeCalc.ChargeLimit: 2.5
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| 180 | #MJCalibration.MCalibrationChargeCalc.ChargeErrLimit: 0
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| 181 | #MJCalibration.MCalibrationChargeCalc.ChargeRelErrLimit: 1
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| 182 | #MJCalibration.MCalibrationChargeCalc.Debug: no
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| 183 |
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| 184 | #MJCalibration.MCalibrationChargeCalc.FFactorErrLimit: 4.5
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| 185 | #MJCalibration.MCalibrationChargeCalc.LambdaErrLimit: 0.2
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| 186 | #MJCalibration.MCalibrationChargeCalc.LambdaCheckLimit: 0.5
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| 187 | #MJCalibration.MCalibrationChargeCalc.PheErrLimit: 3.5
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| 188 |
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| 189 | #MJCalibration.MHCalibrationChargeCam.Debug: no
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| 190 | #MJCalibration.MHCalibrationChargeCam.LoGain: yes
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| 191 | #MJCalibration.MHCalibrationChargeCam.Oscillations: yes
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| 192 | #MJCalibration.MHCalibrationChargeCam.SizeCheck: yes
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| 193 | #MJCalibration.MHCalibrationChargeCam.Averageing: yes
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| 194 | #MJCalibration.MHCalibrationChargeCam.HiGainNbins: 500
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| 195 | #MJCalibration.MHCalibrationChargeCam.HiGainFirst: -100.5
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| 196 | #MJCalibration.MHCalibrationChargeCam.HiGainLast: 1899.5
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| 197 | #MJCalibration.MHCalibrationChargeCam.LoGainNbins: 500
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| 198 | #MJCalibration.MHCalibrationChargeCam.LoGainFirst: -100.5
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| 199 | #MJCalibration.MHCalibrationChargeCam.LoGainLast: 899.5
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| 200 | #MJCalibration.MHCalibrationChargeCam.TimeLowerLimit: 1.
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| 201 | #MJCalibration.MHCalibrationChargeCam.TimeUpperLimit: 3.
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| 202 | #MJCalibration.MHCalibrationChargeCam.NumHiGainSaturationLimit: 0.02
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| 203 | #MJCalibration.MHCalibrationChargeCam.NumLoGainSaturationLimit: 0.005
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| 204 | #MJCalibration.MHCalibrationChargeCam.ProbLimit: 0.0001
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| 205 | #MJCalibration.MHCalibrationChargeCam.OverflowLimit: 0.005
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| 206 | #MJCalibration.MHCalibrationChargeCam.PulserFrequency: 500
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| 207 |
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| 208 | #MJCalibration.MHCalibrationRelTimeCam.Debug: no
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| 209 | #MJCalibration.MHCalibrationRelTimeCam.LoGain: no
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| 210 | #MJCalibration.MHCalibrationRelTimeCam.Oscillations: yes
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| 211 | #MJCalibration.MHCalibrationRelTimeCam.SizeCheck: yes
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| 212 | #MJCalibration.MHCalibrationRelTimeCam.Averageing: yes
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| 213 | #MJCalibration.MHCalibrationRelTimeCam.HiGainNbins: 210
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| 214 | #MJCalibration.MHCalibrationRelTimeCam.HiGainFirst: -5.
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| 215 | #MJCalibration.MHCalibrationRelTimeCam.HiGainLast: 10.
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| 216 | #MJCalibration.MHCalibrationRelTimeCam.NumHiGainSaturationLimit: 0.25
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| 217 | #MJCalibration.MHCalibrationRelTimeCam.ProbLimit: 0.00001
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| 218 | #MJCalibration.MHCalibrationRelTimeCam.OverflowLimit: 0.005
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| 219 | #MJCalibration.MHCalibrationRelTimeCam.PulserFrequency: 500
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| 220 |
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| 221 | # -------------------------------------------------------------------------
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| 222 | # Use this to change the behaviour of the calibration
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| 223 | # -------------------------------------------------------------------------
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| 224 | #MJCalibration.MHCalibrationChargeCam.Debug: no
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| 225 |
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| 226 |
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| 227 |
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| 228 | # ==========================================================================
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| 229 | #############################################################################
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| 230 | # ==========================================================================
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| 231 | # Signal extraction
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| 232 | # ==========================================================================
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| 233 | #############################################################################
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| 234 | # ==========================================================================
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| 235 |
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| 236 | # -------------------------------------------------------------------------
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| 237 | # Use a OutputPath if you want to write the results to a file
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| 238 | # -------------------------------------------------------------------------
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| 239 | #MJCalibrateSignal.PathOut: .
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| 240 | #MJPedestalY1.PathOut: .
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| 241 | #MJPedestalY2.PathOut: .
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| 242 | #MJPedestalY3.PathOut: .
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| 243 | #MJPedestalY1.PathData: /data/MAGIC/Period016/
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| 244 | #MJPedestalY2.PathData: /data/MAGIC/Period016/
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| 245 | #MJPedestalY3.PathData: /data/MAGIC/Period016/
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| 246 | #MJCalibrateSignal.PathData: /data/MAGIC/Period016/
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| 247 | #MJCalibrateSignal.PathIn: .
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| 248 |
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| 249 | # -------------------------------------------------------------------------
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| 250 | # If you want to change the behaviour of the pedestal extraction...
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| 251 | # -------------------------------------------------------------------------
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| 252 | # Used for data-check (eg. raw files are read)
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| 253 | #MJPedestalY1.DataCheck: No
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| 254 | #MJPedestalY2.DataCheck: No
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| 255 | #MJPedestalY3.DataCheck: No
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| 256 | #MJPedestalY1.UseData: Yes
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| 257 | #MJPedestalY2.UseData: Yes
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| 258 | #MJPedestalY3.UseData: Yes
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| 259 | MJPedestalY1.MaxEvents: 500
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| 260 | MJPedestalY2.MaxEvents: 500
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| 261 | MJPedestalY3.MaxEvents: 500
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| 262 |
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| 263 | #MJPedestalY.ExtractPedestal: MPedCalcFromLoGain
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| 264 | #MJPedestalY.ExtractPedestal.PedestalUpdate: no
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| 265 |
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| 266 | # -------------------------------------------------------------------------
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| 267 | # Setup pedestal extractor for running through data
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| 268 | # -------------------------------------------------------------------------
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| 269 | #MJCalibrateSignal.MPedCalcFundamental.PedestalUpdate: yes
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| 270 | #MJCalibrateSignal.MPedCalcFundamental.NumEventsDump: 1500
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| 271 | #MJCalibrateSignal.MPedCalcFundamental.ExtractWinFirst: 15
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| 272 | #MJCalibrateSignal.MPedCalcFundamental.ExtractWinSize: 6
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| 273 | #MJCalibrateSignal.MPedCalcFundamental.CheckWinFirst: 0
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| 274 | #MJCalibrateSignal.MPedCalcFundamental.CheckWinSize: 29
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| 275 | #MJCalibrateSignal.MPedCalcFundamental.MaxHiGainVar: 40
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| 276 |
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| 277 | #MJCalibrateSignal.MPedCalcFromExtractor.PedestalUpdate: yes
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| 278 | #MJCalibrateSignal.MPedCalcFromExtractor.NumEventsDump: 1500
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| 279 | #MJCalibrateSignal.MPedCalcFromExtractor.ExtractWinFirst: 15
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| 280 | #MJCalibrateSignal.MPedCalcFromExtractor.ExtractWinSize: 6
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| 281 | #MJCalibrateSignal.MPedCalcFromExtractor.CheckWinFirst: 0
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| 282 | #MJCalibrateSignal.MPedCalcFromExtractor.CheckWinSize: 29
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| 283 | #MJCalibrateSignal.MPedCalcFromExtractor.MaxHiGainVar: 40
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| 284 |
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| 285 | # -------------------------------------------------------------------------
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| 286 | # Use this if you want to change the signal extractor
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| 287 | # -------------------------------------------------------------------------
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| 288 | #MJCalibrateSignal.ExtractSignal.LoGainSwitch: 150
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| 289 | #MJCalibrateSignal.ExtractSignal.HiGainFirst: 3
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| 290 | #MJCalibrateSignal.ExtractSignal.HiGainLast: 17
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| 291 | #MJCalibrateSignal.ExtractSignal.LoGainFirst: 3
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| 292 | #MJCalibrateSignal.ExtractSignal.LoGainLast: 14
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| 293 |
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| 294 | # -------------------------------------------------------------------------
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| 295 | # Setup calibration of data
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| 296 | # -------------------------------------------------------------------------
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| 297 | # Used for data-check (eg. raw files are read)
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| 298 | #MJCalibrateSignal.RawData: no
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| 299 | # Used for MC
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| 300 | #MJCalibrateSignal.MC: no
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| 301 | #MJCalibrateSignal.MCalibrateData.PedestalFlag: Event
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| 302 | #MJCalibrateSignal.MCalibrateData.CalibrationMode: Default
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| 303 |
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| 304 | #MJCalibrateSignal.Interlaced: no
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| 305 | #MJCalibrateSignal.RelTimesUpdate: no
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| 306 | #MJCalibrateSignal.HiLoCalibration: no
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| 307 |
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| 308 | # -------------------------------------------------------------------------
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| 309 | # Setup level for determining of bad pixels
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| 310 | # -------------------------------------------------------------------------
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| 311 | #MJCalibrateSignal.MBadPixelsCalc.PedestalLevel: 3.0
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| 312 | #MJCalibrateSignal.MBadPixelsCalc.PedestalLevelVariance: 3.0
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| 313 | #MJCalibrateSignal.MBadPixelsTreat.NumMinNeighbors: 3
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| 314 | #MJCalibrateSignal.MBadPixelsTreat.UseInterpolation: yes
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| 315 | #MJCalibrateSignal.MBadPixelsTreat.ProcessPedestalEvt: yes
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| 316 | #MJCalibrateSignal.MBadPixelsTreat.ProcessPedestalRun: no
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| 317 | #MJCalibrateSignal.MBadPixelsTreat.ProcessTimes: yes
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| 318 | #MJCalibrateSignal.MBadPixelsTreat.UseCentralPixel: no
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| 319 | #MJCalibrateSignal.MBadPixelsTreat.HardTreatment: no
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| 320 |
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| 321 | # -------------------------------------------------------------------------
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| 322 | # Setup interlaced calibration events
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| 323 | # -------------------------------------------------------------------------
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| 324 | #MJCalibrateSignal.MHCalibrationChargeCam.Debug: no
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| 325 | #MJCalibrateSignal.MHCalibrationChargeCam.LoGain: yes
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| 326 | MJCalibrateSignal.MHCalibrationChargeCam.Oscillations: no
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| 327 | #MJCalibrateSignal.MHCalibrationChargeCam.SizeCheck: yes
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| 328 | #MJCalibrateSignal.MHCalibrationChargeCam.Averageing: yes
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| 329 | #MJCalibrateSignal.MHCalibrationChargeCam.HiGainNbins: 500
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| 330 | #MJCalibrateSignal.MHCalibrationChargeCam.HiGainFirst: -100.5
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| 331 | #MJCalibrateSignal.MHCalibrationChargeCam.HiGainLast: 1899.5
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| 332 | MJCalibrateSignal.MHCalibrationChargeCam.LoGainNbins: 250
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| 333 | #MJCalibrateSignal.MHCalibrationChargeCam.LoGainFirst: -100.5
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| 334 | #MJCalibrateSignal.MHCalibrationChargeCam.LoGainLast: 899.5
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| 335 | #MJCalibrateSignal.MHCalibrationChargeCam.TimeLowerLimit: 1.
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| 336 | #MJCalibrateSignal.MHCalibrationChargeCam.TimeUpperLimit: 3.
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| 337 | #MJCalibrateSignal.MHCalibrationChargeCam.NumHiGainSaturationLimit: 0.02
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| 338 | #MJCalibrateSignal.MHCalibrationChargeCam.NumLoGainSaturationLimit: 0.005
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| 339 | #MJCalibrateSignal.MHCalibrationChargeCam.ProbLimit: 0.0001
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| 340 | #MJCalibrateSignal.MHCalibrationChargeCam.OverflowLimit: 0.005
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| 341 | MJCalibrateSignal.MHCalibrationChargeCam.PulserFrequency: 50
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| 342 |
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| 343 | # -------------------------------------------------------------------------
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| 344 | # Setup relative time interlaced calibration
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| 345 | # -------------------------------------------------------------------------
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| 346 | #MJCalibrateSignal.MHCalibrationRelTimeCam.Debug: no
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| 347 | #MJCalibrateSignal.MHCalibrationRelTimeCam.LoGain: no
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| 348 | MJCalibrateSignal.MHCalibrationRelTimeCam.Oscillations: no
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| 349 | #MJCalibrateSignal.MHCalibrationRelTimeCam.SizeCheck: yes
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| 350 | #MJCalibrateSignal.MHCalibrationRelTimeCam.Averageing: yes
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| 351 | #MJCalibrateSignal.MHCalibrationRelTimeCam.HiGainNbins: 210
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| 352 | #MJCalibrateSignal.MHCalibrationRelTimeCam.HiGainFirst: -5.
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| 353 | #MJCalibrateSignal.MHCalibrationRelTimeCam.HiGainLast: 10.
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| 354 | #MJCalibrateSignal.MHCalibrationRelTimeCam.NumHiGainSaturationLimit: 0.25
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| 355 | #MJCalibrateSignal.MHCalibrationRelTimeCam.ProbLimit: 0.00001
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| 356 | #MJCalibrateSignal.MHCalibrationRelTimeCam.OverflowLimit: 0.005
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| 357 | MJCalibrateSignal.MHCalibrationRelTimeCam.PulserFrequency: 50
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| 358 |
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| 359 |
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| 360 | MJCalibrateSignal.FinalFantasy: MHCamFlorian
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