| 1 | <?php
|
|---|
| 2 |
|
|---|
| 3 | ini_set("display_errors", "On");
|
|---|
| 4 |
|
|---|
| 5 | include("plotinclude.php");
|
|---|
| 6 | //print header
|
|---|
| 7 | printf("<!DOCTYPE html PUBLIC \"-//W3C//DTD HTML 4.01 Transitional//EN\">\n");
|
|---|
| 8 | printf("<html>\n<head>\n");
|
|---|
| 9 | printf("<meta http-equiv='content-type' content='text/html; charset=ISO-8859-1'>\n");
|
|---|
| 10 | printf("<title>show plots</title>\n");
|
|---|
| 11 | printf("<link rel='stylesheet' type='text/css' href='lamouette.css'>\n");
|
|---|
| 12 | printf("</head>\n");
|
|---|
| 13 | printf("<body>\n");
|
|---|
| 14 |
|
|---|
| 15 | //init
|
|---|
| 16 | $ds=0;
|
|---|
| 17 | if (!empty($_GET["ds"]))
|
|---|
| 18 | $ds=$_GET["ds"];
|
|---|
| 19 | $tabnum=1;
|
|---|
| 20 | if (!empty($_GET["tabnum"]))
|
|---|
| 21 | $tabnum=$_GET["tabnum"];
|
|---|
| 22 | $type2="calib";
|
|---|
| 23 | if (!empty($_GET["type2"]))
|
|---|
| 24 | $type2=$_GET["type2"];
|
|---|
| 25 | $plot="";
|
|---|
| 26 | $nextseq=0;
|
|---|
| 27 | $prevseq=0;
|
|---|
| 28 | $seq=0;
|
|---|
| 29 | if (!empty($_GET["prevseq"]) && !empty($_GET["prev"]))
|
|---|
| 30 | $seq=$_GET["prevseq"];
|
|---|
| 31 | if (!empty($_GET["nextseq"]) && !empty($_GET["next"]))
|
|---|
| 32 | $seq=$_GET["nextseq"];
|
|---|
| 33 | $next=0;
|
|---|
| 34 | $prev=0;
|
|---|
| 35 | $numseq=0;
|
|---|
| 36 |
|
|---|
| 37 | //check if dataset file is existing
|
|---|
| 38 | if (!empty($ds))
|
|---|
| 39 | {
|
|---|
| 40 | $num=sprintf("%08d",$ds);
|
|---|
| 41 | $num2=substr($num,0,5);
|
|---|
| 42 | $datasetfile="../datasets/" . $num2 . "/dataset" . $num . ".txt";
|
|---|
| 43 | if (!file_exists($datasetfile))
|
|---|
| 44 | {
|
|---|
| 45 | printf("Sorry, there's no file for dataset %s available.", $ds);
|
|---|
| 46 | //set dataset and sequence numbers to 0 for next checks
|
|---|
| 47 | $ds=0;
|
|---|
| 48 | $seq=0;
|
|---|
| 49 | }
|
|---|
| 50 | }
|
|---|
| 51 |
|
|---|
| 52 | //in case of a valid dataset
|
|---|
| 53 | if (!empty($ds))
|
|---|
| 54 | {
|
|---|
| 55 | //get sequences from dataset file
|
|---|
| 56 | // alternative: query it from db
|
|---|
| 57 | $dataset=file_get_contents($datasetfile);
|
|---|
| 58 | $onpos=strpos($dataset, "SequencesOn:");
|
|---|
| 59 | $offpos=strpos($dataset, "SequencesOff:");
|
|---|
| 60 | $possource=strpos($dataset, "SourceName:");
|
|---|
| 61 | $sequoff="";
|
|---|
| 62 | if (!empty($offpos))
|
|---|
| 63 | $sequoff=split(" ", trim(substr($dataset, $offpos+13, $possource-($offpos+13))));
|
|---|
| 64 | if (empty($offpos))
|
|---|
| 65 | $offpos=$possource;
|
|---|
| 66 | $sequon=split(" ", trim(substr($dataset, $onpos+12, $offpos-($onpos+12))));
|
|---|
| 67 | $sequences=$sequon;
|
|---|
| 68 | if (!empty($sequoff))
|
|---|
| 69 | $sequences=array_merge($sequences,$sequoff);
|
|---|
| 70 | if ($seq!=0 && !in_array($seq, $sequences))
|
|---|
| 71 | $seq=0;
|
|---|
| 72 |
|
|---|
| 73 | //get next, current and previous sequence
|
|---|
| 74 | foreach($sequences as $key => $sequ)
|
|---|
| 75 | {
|
|---|
| 76 | if ($seq==0)
|
|---|
| 77 | $seq=$sequ;
|
|---|
| 78 | if ($next==1)
|
|---|
| 79 | {
|
|---|
| 80 | $nextseq=$sequ;
|
|---|
| 81 | if ($prevseq!=0)
|
|---|
| 82 | break;
|
|---|
| 83 | $next=0;
|
|---|
| 84 | }
|
|---|
| 85 | if ($sequ==$seq)
|
|---|
| 86 | {
|
|---|
| 87 | $next=1;
|
|---|
| 88 | continue;
|
|---|
| 89 | }
|
|---|
| 90 | $prevseq=$sequ;
|
|---|
| 91 | }
|
|---|
| 92 | $numseq=count($sequences);
|
|---|
| 93 |
|
|---|
| 94 | //in case a dataset consists of less than 3 sequences
|
|---|
| 95 | if ($numseq==2)
|
|---|
| 96 | $nextseq=$prevseq;
|
|---|
| 97 | }
|
|---|
| 98 |
|
|---|
| 99 | //get link for plot
|
|---|
| 100 | $type=gettypename($type2);
|
|---|
| 101 | $plot=getplotname($seq, $tabnum, $type, $type2);
|
|---|
| 102 |
|
|---|
| 103 | //print form for choosing dataset and plots
|
|---|
| 104 | printf("<form action='showplots-ds.php' method='GET'>\n");
|
|---|
| 105 | printf("<table width='100%%' border='0'>\n");
|
|---|
| 106 | printf("<tr><td valign='top'>\n<tr>\n");
|
|---|
| 107 | PrintHomeHelp();
|
|---|
| 108 | printf("<td align='center'>\n");
|
|---|
| 109 | if (!empty($prevseq))
|
|---|
| 110 | printf("%d ", $prevseq);
|
|---|
| 111 | if ($numseq>1)
|
|---|
| 112 | printf("<input type='submit' value='<< Prev Plot' name='prev'>\n");
|
|---|
| 113 | printf("<input type='text' name='ds' size='5' maxlength='5' value='%s'>\n", $ds);
|
|---|
| 114 | PrintType2PullDown($type2);
|
|---|
| 115 | printf("<input type='text' name='tabnum' size='2' maxlenght='2' value='%s'>\n", $tabnum);
|
|---|
| 116 | printf("<input type='hidden' name='prevseq' size='2' maxlenght='2' value='%s'>\n", $prevseq);
|
|---|
| 117 | printf("<input type='hidden' name='nextseq' size='2' maxlenght='2' value='%s'>\n", $nextseq);
|
|---|
| 118 | if ($numseq>1)
|
|---|
| 119 | printf("<input type='submit' value='Next Plot >>' name='next'>\n");
|
|---|
| 120 | else
|
|---|
| 121 | printf("<input type='submit' value='Plot' name='next'>\n");
|
|---|
| 122 | if (!empty($nextseq))
|
|---|
| 123 | printf(" %d ", $nextseq);
|
|---|
| 124 | if ($numseq>0)
|
|---|
| 125 | {
|
|---|
| 126 | printf(" [ %d sequence", $numseq);
|
|---|
| 127 | if ($numseq>1)
|
|---|
| 128 | printf("s");
|
|---|
| 129 | print(" ] \n");
|
|---|
| 130 | }
|
|---|
| 131 | printf("</td><td align='right'>\n");
|
|---|
| 132 | printf("<input class='Width' type='button' value='Reset' onClick='self.location.href=\"showplots-ds.php\"'>\n");
|
|---|
| 133 | printf("</td>\n</tr>\n<tr>\n<td align='center' colspan='3'>\n");
|
|---|
| 134 | if (!empty($seq))
|
|---|
| 135 | {
|
|---|
| 136 | if (in_array($seq, $sequon))
|
|---|
| 137 | printf("<font color='green'>\n");
|
|---|
| 138 | else
|
|---|
| 139 | printf("<font color='red'>\n");
|
|---|
| 140 | printf("%s <img src='%s'>", $plot, $plot);
|
|---|
| 141 | }
|
|---|
| 142 | else
|
|---|
| 143 | printf("You have to insert a dataset number into the first field.");
|
|---|
| 144 | printf("</td>\n</tr>\n</table>\n");
|
|---|
| 145 | printf("</form>\n");
|
|---|
| 146 | printf("</body>\n");
|
|---|
| 147 | printf("</html>\n");
|
|---|
| 148 |
|
|---|
| 149 | ini_set("display_errors", "Off");
|
|---|
| 150 |
|
|---|
| 151 | ?>
|
|---|