#!/bin/sh # # ======================================================================== # # * # * This file is part of MARS, the MAGIC Analysis and Reconstruction # * Software. It is distributed to you in the hope that it can be a useful # * and timesaving tool in analysing Data of imaging Cerenkov telescopes. # * It is distributed WITHOUT ANY WARRANTY. # * # * Permission to use, copy, modify and distribute this software and its # * documentation for any purpose is hereby granted without fee, # * provided that the above copyright notice appear in all copies and # * that both that copyright notice and this permission notice appear # * in supporting documentation. It is provided "as is" without express # * or implied warranty. # * # # # Author(s): Daniela Dorner 05/2006 # # Copyright: MAGIC Software Development, 2000-2007 # # # ======================================================================== # # This a script, which launches other scripts (all scripts, that are run # on primary basis # source `dirname $0`/sourcefile printprocesslog "INFO starting $0" set -C echo "" >> $jmscriptlog 2>&1 echo "starting jobmanager ("`date`")" >> $jmscriptlog 2>&1 # decide which jobmanager you want to run # setup of the different jobmanagers (which scripts they start) # the number of jobs are defined in the file setup case $1 in data) echo "running jobmanager for data" >> $jmscriptlog 2>&1 scripts=( "runganymed" "runstar" "runcallisto" ) # not used: "dodatacheck" "cutslices" scriptscolname=( "fGanymed" "fStar" "fCallisto" ) # not used: "fDataCheckDone" "fCompmux" pnosweek=( ${pnoganymed[@]} ${pnostar[@]} ${pnocallisto[@]} ) # not used: ${pnodatacheck[@]} ${pnocutslices[@]} pnoswe=( ${pnoganymedwe[@]} ${pnostarwe[@]} ${pnocallistowe[@]} ) # not used: ${pnodatacheckwe[@]} ${pnocutsliceswe[@]} break ;; mc) echo "running jobmanager for mc" >> $jmscriptlog 2>&1 scripts=( "runcorsika" "runreflector" "runcamera" ) scriptscolname=( "fCorsikaFileAvail" "fReflectorFileAvail" "fCameraFileAvail" ) pnosweek=( ${pnocorsika[@]} ${pnoreflector[@]} ${pnocamera[@]} ) pnoswe=( ${pnocorsikawe[@]} ${pnoreflectorwe[@]} ${pnocamerawe[@]} ) break ;; *) echo "$1 is a wrong commandline option for jobmanager -> exit" >> $jmscriptlog 2>&1 printprocesslog "WARN $1 is wrong commandline option for jobmanager" finish >> $jmscriptlog 2>&1 break ;; esac # choose commands according to queueing system (defined in setup) case $queuesys in sge) echo "setting commands for sun grid engine" >> $jmscriptlog 2>&1 alias 'queuesubmit'='/opt/gridengine/bin/lx26-amd64/qsub -b y -e `echo $runlogpath`/error-`echo $date`.log -o `echo $runlogpath`/log-`echo $date`.log `echo $scriptspath`/`echo ${scripts[$i]}` ' # alias 'queuesubmit'='/opt/gridengine/bin/lx26-amd64/qsub -sc runlogpath=`echo $runlogpath` -sc date=`echo $date` -sc scriptspath=`echo $scriptspath` -sc script=`echo ${scripts[$i]}` `echo $scriptspath`/job.sge ' alias 'checkqueue'="/opt/gridengine/bin/lx26-amd64/qstat | awk ' { print \"Owner\"\$4\" \" \$3\"Jobstatus\"\$5 } '" break ;; condor) echo "setting commands for condor" >> $jmscriptlog 2>&1 alias 'queuesubmit'='/usr/local/bin/condor_submit -a path=`echo $scriptspath` -a prog=`echo ${scripts[$i]}` -a date=`echo $date` -a dir=`echo $runlogpath` `echo $scriptspath`/run.condor' alias 'checkqueue'='/usr/local/bin/condor_q -global -format "Owner%s " Owner -format "%s" CMD -format "Jobstatus%s\n" Jobstatus ' break ;; *) finish >> $jmscriptlog 2>&1 ;; esac prev=$max user=`whoami` # endless loop notcount=0 nothingtodocount=0 nothingtodosleeptime=0 errorsleeptime=$errorsleeptimedefault while (( $notcount < 100 )) do for (( i=0 ; i < ${#scripts[@]} ; i++ )) do date >> $jmscriptlog 2>&1 source `dirname $0`/sourcefile echo "script: ${scripts[$i]}" >> $jmscriptlog 2>&1 # check if there's something to do column=${scriptscolname[$i]} getstatus >> $jmscriptlog 2>&1 echo " $numproc ${scripts[$i]} still to do" >> $jmscriptlog 2>&1 if [ "$numproc" = "" ] then prev=0 nothingtodocount=`expr $nothingtodocount + 1` if [ $nothingtodocount -lt ${#scripts[@]} ] then cont >> $jmscriptlog 2>&1 else if [ $nothingtodosleeptime -lt $sleeptimelimit ] then nothingtodosleeptime=`echo " $nothingtodocount * $sleeptime " | bc` fi echo "sleeping $nothingtodosleeptime" >> $jmscriptlog 2>&1 sleep $nothingtodosleeptime cont >> $jmscriptlog 2>&1 fi else nothingtodocount=0 nothingtodosleeptime=0 fi echo "sleeping $sleeptime..." >> $jmscriptlog 2>&1 sleep $sleeptime # get processes in queue # q=(`/usr/local/bin/condor_q -global -format "Owner%s " Owner -format "%s" CMD -format "Jobstatus%s\n" Jobstatus 2>&1 `) # q=(`/opt/gridengine/bin/lx26-amd64/qstat | awk ' { print "Owner"$4" " $3"Jobstatus"$5 } ' 2>&1 `) q=(`checkqueue 2>&1 `) if echo $q | egrep \(Error\|failed\) then echo `date`" WARN checking query ($queuesys) failed" >> $jmscriptlog 2>&1 printprocesslog "WARN checking query ($queuesys) failed" echo `date`" WARN checking query ($queuesys) failed" >> $jmerrorlog cont >> $jmscriptlog 2>&1 fi # get processes of user in queue q1=(`echo ${q[@]} | egrep -o Owner$user`) queued=${#q1[@]} # get scripts in queue q2=(`echo ${q[@]} | egrep -o ${scripts[$i]}`) queuedscript=${#q2[@]} # get running scripts q3=( `echo ${q[@]} | egrep -o \(${scripts[$i]}Jobstatus2\|${scripts[$i]}Jobstatusr\)` ) runningscript=${#q3[@]} stillinqueue=`echo $queuedscript - $runningscript | bc ` #get total number of allowed process for current time hour=`date +%k` totalpno=${pnototal[$hour]} #choose array according to the day of the week dayofweek=`date +%u` case $dayofweek in 0 | 6) pnos=( ${pnoswe[@]} ) ;; *) pnos=( ${pnosweek[@]} ) ;; esac # get number of allowed scripts for current time num=`echo "((( $i + 1 ) * 24 ) + ( $hour + 1 ) ) - 24 - 1 " | bc ` pnoscript=${pnos[$num]} # if there was nothing to do for previous script, more scripts can be allowed if [ $prev -eq 0 ] then echo " prev=0 => resetting pnoscript [$pnoscript] to max [$max]" >> $jmscriptlog 2>&1 pnoscript=$max fi echo " found $queued jobs in the queue (incl. running jobs) [allowed $totalpno]" >> $jmscriptlog 2>&1 echo " found $queuedscript ${scripts[$i]} in the queue (incl. running jobs [$runningscript]) [allowed $pnoscript] - not running: $stillinqueue" >> $jmscriptlog 2>&1 # continue if there are already enough processes or scripts in the queue if [ "$queued" -ge "$totalpno" ] || [ "$queuedscript" -ge "$pnoscript" ] then cont >> $jmscriptlog 2>&1 fi # continue if the number of script is the queue is larger (or equal) than the number which still has to be done if [ $numproc -le $stillinqueue ] then echo " numproc($numproc) -le stillinqueue($stillinqueue)" >> $jmscriptlog 2>&1 cont >> $jmscriptlog 2>&1 fi # reset prev prev=$max # submit 1 script to queuing system date=`date +%Y-%m-%d` echo " committing 1 ${scripts[$i]} to $queuesys" >> $jmscriptlog 2>&1 # if ! /usr/local/bin/condor_submit -a path=$scriptspath -a prog=${scripts[$i]} -a date=$date -a dir=$runlogpath $scriptspath/run.condor 2>> $jmerrorlog # if ! /opt/gridengine/bin/lx26-amd64/qsub -e $runlogpath/error-$date.log -o $runlogpath/log-$(date).log 2>> $jmerrorlog if ! queuesubmit 2>> $jmerrorlog then echo `date`" WARN submitting job ($queuesys) failed" >> $jmerrorlog echo "$queuesys is not working -> sleeping $errorsleeptime" >> $jmscriptlog 2>&1 printprocesslog "WARN submitting ${scripts[$i]} ($queuesys) failed" if [ $errorsleeptime -lt $sleeptimelimit ] then errorsleeptime=`echo " $errorsleeptime + $errorsleeptimedefault " | bc` fi sleep $errorsleeptime else errorsleeptime=$errorsleeptimedefault fi date >> $jmscriptlog 2>&1 echo "" >> $jmscriptlog 2>&1 done done