| 1 | #!/bin/sh
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| 2 | #
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| 3 | # ========================================================================
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| 4 | #
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| 5 | # *
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| 6 | # * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 7 | # * Software. It is distributed to you in the hope that it can be a useful
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| 8 | # * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 9 | # * It is distributed WITHOUT ANY WARRANTY.
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| 10 | # *
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| 11 | # * Permission to use, copy, modify and distribute this software and its
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| 12 | # * documentation for any purpose is hereby granted without fee,
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| 13 | # * provided that the above copyright notice appear in all copies and
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| 14 | # * that both that copyright notice and this permission notice appear
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| 15 | # * in supporting documentation. It is provided "as is" without express
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| 16 | # * or implied warranty.
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| 17 | # *
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| 18 | #
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| 19 | #
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| 20 | # Author(s): Daniela Dorner 08/2004 <mailto:dorner@astro.uni-wuerzburg.de>
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| 21 | #
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| 22 | # Copyright: MAGIC Software Development, 2000-2006
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| 23 | #
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| 24 | #
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| 25 | # ========================================================================
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| 26 | #
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| 27 | # This script is launching the calibration of sequences.
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| 28 | #
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| 29 | # In the case of calibration only one sequence is processed. Despite of
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| 30 | # that the structure of the script is such, that also more sequences could
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| 31 | # be processed. The restriction to one sequence has been made, as the
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| 32 | # calibration takes some time. There's one todo file per sequence.
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| 33 | # First the script searches for a todo file. Then the sequence from this
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| 34 | # todo file is calibrated and the merpp update is done.
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| 35 | #
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| 36 | # the callisto.rc files are stored in the setup directory
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| 37 | #
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| 38 |
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| 39 | user=`whoami`
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| 40 | program=callisto
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| 41 | source /home/$user/Mars/datacenter/scripts/sourcefile
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| 42 |
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| 43 | set -C
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| 44 |
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| 45 | # define callisto.rc files
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| 46 | callistorcnew=$setuppath/$program/callisto.rc
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| 47 | callistorcmarapr05=$setuppath/$program/callisto_MarApr05.rc
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| 48 |
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| 49 | table=SequenceProcessStatus
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| 50 | column=fCallisto
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| 51 | #pno=500 # number of processes, i.e. number of todo-files
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| 52 |
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| 53 | todofile=$listpath/ToDo-$table-$column
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| 54 | lockfile=$lockpath/lock-getting-$program-list.txt
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| 55 |
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| 56 | scriptlogpath=$logpath/run/$program/`date +%Y/%m/%d`
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| 57 | makedir $scriptlogpath
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| 58 | scriptlog=$scriptlogpath/run$program-$datetime.log
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| 59 |
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| 60 | date >> $scriptlog 2>&1
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| 61 |
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| 62 | cd $mars
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| 63 |
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| 64 | # get todo file
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| 65 | echo "checking if other todo-files are there" >> $scriptlog 2>&1
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| 66 | if ls $todofile-[1-9]*.txt >> $scriptlog 2>&1
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| 67 | then
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| 68 | echo "other file(s) on disk " >> $scriptlog 2>&1
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| 69 | echo " -> choose one file and start calibrating" >> $scriptlog 2>&1
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| 70 | else
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| 71 | # check if getting of list is already running
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| 72 | checklock "getting list of" >> $scriptlog 2>&1
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| 73 | # get todo list
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| 74 | getdolist >> $scriptlog 2>&1
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| 75 | rm -v $lockfile >> $scriptlog 2>&1
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| 76 | fi
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| 77 |
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| 78 | # choose todo file
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| 79 | nr=bla
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| 80 | echo "finding the right todo-file" >> $scriptlog 2>&1
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| 81 | todofiles=`ls -r $listpath/ToDo-$table-$column-*`
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| 82 |
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| 83 | for todofile in ${todofiles[@]}
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| 84 | do
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| 85 | if ! ls $todofile >> $scriptlog 2>&1
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| 86 | then
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| 87 | echo "file is not on disk -> continue" >> $scriptlog 2>&1
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| 88 | continue
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| 89 | fi
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| 90 | lockfile=`echo $todofile | sed -e 's/lists/locks/' -e 's/ToDo/lock/'`
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| 91 | date > $lockfile >> $scriptlog 2>&1
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| 92 | checklock=$?
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| 93 | case $checklock in
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| 94 | 0) echo "checklock=$checklock -> setting number" >> $scriptlog 2>&1
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| 95 | nr=${i}
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| 96 | break;;
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| 97 | 1) echo "checklock=$checklock -> file exists -> continue" >> $scriptlog 2>&1;;
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| 98 | *) echo "checklock=$checklock -> something went completely wrong" >> $scriptlog 2>&1;;
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| 99 | esac
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| 100 | done
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| 101 |
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| 102 | case $nr in
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| 103 | bla) echo "everything is beeing processed -> exit" >> $scriptlog 2>&1
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| 104 | date >> $scriptlog 2>&1
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| 105 | exit;;
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| 106 | 12345678) echo "process nr: "$nr >> $scriptlog 2>&1;;
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| 107 | esac
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| 108 |
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| 109 | # get sequence(s) from todo file
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| 110 | sequences=(`cat $todofile`)
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| 111 | if [ "$sequences" = "" ]
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| 112 | then
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| 113 | echo "nothing to do -> exit" >> $scriptlog 2>&1
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| 114 | finish >> $scriptlog 2>&1
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| 115 | fi
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| 116 |
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| 117 | # run calibration for sequence(s)
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| 118 | echo "sequences: "${sequences[@]} >> $scriptlog 2>&1
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| 119 | for sequence in ${sequences[@]}
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| 120 | do
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| 121 | no=`printf %08d $sequence | cut -c 0-4`
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| 122 | no2=`printf %08d $sequence`
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| 123 | var1=$no
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| 124 | var2=$no2
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| 125 | outpath="$datapath/$program/$no/$no2"
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| 126 | echo "outpath: "$outpath >> $scriptlog 2>&1
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| 127 | makedir $outpath >> $scriptlog 2>&1
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| 128 |
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| 129 | sequfile="$sequpath/$no/sequence$no2.txt"
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| 130 | echo "sequfile: "$sequfile >> $scriptlog 2>&1
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| 131 |
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| 132 | # find callisto.rc file
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| 133 | if [ -e $outpath/callisto.rc ]
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| 134 | then
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| 135 | echo "found $program.rc in $outpath -> using this " >> $scriptlog 2>&1
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| 136 | callistorcseq=$outpath/callisto.rc
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| 137 | else
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| 138 | echo "no $program.rc found in $outpath -> making link " >> $scriptlog 2>&1
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| 139 | if [ 49735 -lt $sequence ] && [ $sequence -lt 53516 ]
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| 140 | then
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| 141 | ln -vs $callistorcmarapr05 $outpath/callisto.rc >> $scriptlog 2>&1
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| 142 | else
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| 143 | ln -vs $callistorcnew $outpath/callisto.rc >> $scriptlog 2>&1
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| 144 | fi
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| 145 | callistorcseq=$outpath/callisto.rc
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| 146 | fi
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| 147 |
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| 148 | echo "run $program..." >> $scriptlog 2>&1
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| 149 | setstatus "start" >> $scriptlog 2>&1
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| 150 |
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| 151 | ./callisto -b -q -v4 -f -raw --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --out=$outpath --config=$callistorcseq $sequfile 2>> $scriptlog > /dev/null
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| 152 | check1=$?
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| 153 |
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| 154 | case $check1 in
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| 155 | 0) echo "check1=$check1 -> everything ok -> doing update..." >> $scriptlog 2>&1
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| 156 | # running merpp update if calibration worked
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| 157 | # finding files, which have to be updated
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| 158 | echo "finding files to be updated" >> $scriptlog 2>&1
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| 159 | calfiles=`find $outpath -name *_Y_* `
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| 160 | echo "files to be updated: "$calfiles >> $scriptlog 2>&1
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| 161 | if [ "$calfiles" = "" ]
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| 162 | then
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| 163 | echo "no files found -> continue with next sequence" >> $scriptlog 2>&1
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| 164 | continue
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| 165 | fi
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| 166 |
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| 167 | merpplogpath=$outpath"/merpplogs"
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| 168 | makedir $merpplogpath >> $scriptlog 2>&1
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| 169 |
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| 170 | # updated calibrated data files with the information from the cc and caco files
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| 171 | for calfile in ${calfiles[@]}
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| 172 | do
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| 173 | echo "calfile: "$calfile >> $scriptlog 2>&1
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| 174 | # find cc and caco file
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| 175 | # if file is missing continue with next sequence
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| 176 | runno=`echo $calfile | cut -d_ -f2 | sed -e 's/^0//' | sed -e 's/^0//' | sed -e 's/^0//' `
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| 177 | ccfile=`find /magic/subsystemdata/cc/ -name [2][0][0-2][0-9][0,1][0-9][0-3][0-9]_*${runno}_[P,D,C,S]_*_S.rep`
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| 178 | source=`echo $ccfile | cut -d_ -f4`
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| 179 | cacofile=`find /magic/subsystemdata/caco/ -name dc_[2][0][0-2][0-9]_[0,1][0-9]_[0-3][0-9]_*${runno}_${source}.txt`
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| 180 | # cacofile=`find /magic/subsystemdata/caco/ -name dc_[2][0][0-2][0-9]_[0,1][0-9]_[0-3][0-9]_*${runno}_*.txt`
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| 181 | echo "runno: "$runno >> $scriptlog 2>&1
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| 182 | echo "ccfile: "$ccfile >> $scriptlog 2>&1
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| 183 | if [ "$ccfile" = "" ]
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| 184 | then
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| 185 | echo "no ccfile found for run "$runno >> $scriptlog 2>&1
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| 186 | com=$Fnoccfile
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| 187 | comadd=$runno
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| 188 | check=0
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| 189 | break
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| 190 | fi
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| 191 | echo "cacofile: "$cacofile >> $scriptlog 2>&1
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| 192 | if [ "$cacofile" = "" ]
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| 193 | then
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| 194 | echo "cacofile with no $runno not found" >> $scriptlog 2>&1
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| 195 | echo "finding cacofile..." >> $scriptlog 2>&1
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| 196 | for (( i = 0; i <= 10; i++ ))
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| 197 | do
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| 198 | newrun=`echo $runno - $i | bc`
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| 199 | # echo "$missingcacorun + $i = $newrun"
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| 200 | path=`dirname $ccfile`
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| 201 | path=`echo $path | sed -e 's/cc/caco/'`
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| 202 | echo "path: "$path >> $scriptlog 2>&1
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| 203 | cacofile=`find $path -name *$newrun*`
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| 204 | if [ "$cacofile" = "" ]
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| 205 | then
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| 206 | if [ $i -eq 9 ]
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| 207 | then
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| 208 | echo "no cacofile found" >> $scriptlog 2>&1
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| 209 | com=$Fnocacofile
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| 210 | comadd=$runno
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| 211 | check=0
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| 212 | fi
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| 213 | continue
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| 214 | else
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| 215 | echo "cacofile: "$cacofile >> $scriptlog 2>&1
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| 216 | break
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| 217 | fi
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| 218 | done
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| 219 | fi
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| 220 | ./merpp -u --log=$merpplogpath/merppccupdate$runno.log --html=$merpplogpath/merppccupdate$runno.html --auto-time-stop --runfile=$runno $ccfile $calfile 2>> $scriptlog> /dev/null
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| 221 | check2=$?
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| 222 | case $check2 in
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| 223 | 0) echo "check2=$check2 -> everything ok, merppccupdate worked -> continue" >> $scriptlog 2>&1;;
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| 224 | *) echo "check2=$check2 -> ERROR -> merppccupdate failed" >> $scriptlog 2>&1
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| 225 | com=$Fmerppcc
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| 226 | comadd=$runno
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| 227 | check=$check2
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| 228 | break ;;
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| 229 | esac
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| 230 | ./merpp -u --log=$merpplogpath/merppcacoupdate$runno.log --html=$merpplogpath/merppcacoupdate$runno.html --auto-time $cacofile $calfile 2>> $scriptlog> /dev/null
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| 231 | check3=$?
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| 232 | case $check3 in
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| 233 | 0) echo "check3=$check3 -> everything ok, merppcacoupdate worked -> continue" >> $scriptlog 2>&1;;
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| 234 | *) echo "check3=$check3 -> ERROR -> merppcacoupdate failed" >> $scriptlog 2>&1
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| 235 | com=$Fmerppcaco
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| 236 | comadd=$runno
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| 237 | check=$check3
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| 238 | break ;;
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| 239 | esac
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| 240 | done
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| 241 | ;;
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| 242 | *) echo "check1=$check1 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1
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| 243 | com=$Fcallisto
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| 244 | check=$check1
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| 245 | ;;
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| 246 | esac
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| 247 | # set status
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| 248 | echo "inserting the status for $program for sequence $sequence into the db" >> $scriptlog 2>&1
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| 249 | setstatus "stop" >> $scriptlog 2>&1
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| 250 | done
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| 251 |
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| 252 | finish >> $scriptlog 2>&1
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| 253 |
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