| 1 | #!/bin/sh
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| 2 | #
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| 3 | # ========================================================================
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| 4 | #
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| 5 | # *
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| 6 | # * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 7 | # * Software. It is distributed to you in the hope that it can be a useful
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| 8 | # * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 9 | # * It is distributed WITHOUT ANY WARRANTY.
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| 10 | # *
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| 11 | # * Permission to use, copy, modify and distribute this software and its
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| 12 | # * documentation for any purpose is hereby granted without fee,
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| 13 | # * provided that the above copyright notice appear in all copies and
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| 14 | # * that both that copyright notice and this permission notice appear
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| 15 | # * in supporting documentation. It is provided "as is" without express
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| 16 | # * or implied warranty.
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| 17 | # *
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| 18 | #
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| 19 | #
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| 20 | # Author(s): Daniela Dorner 08/2004 <mailto:dorner@astro.uni-wuerzburg.de>
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| 21 | #
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| 22 | # Copyright: MAGIC Software Development, 2000-2007
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| 23 | #
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| 24 | #
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| 25 | # ========================================================================
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| 26 | #
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| 27 | # This script is launching the calibration of sequences.
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| 28 | #
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| 29 | # As callisto takes some time, only one sequence is processed at once.
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| 30 | # First the script gets a sequence number from the database, for which
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| 31 | # the calibration has to be done (function gettodo). After setting the
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| 32 | # status in the database (set fStartTime to know, that the sequence is
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| 33 | # already being processed), the sequence is calibrated and the merpp
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| 34 | # update is done. Afterwards the status in the database is updated
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| 35 | # according to the return value of the program. In case one of the merpp
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| 36 | # update failes, also the corresponding runnumber is inserted into the
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| 37 | # database.
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| 38 | # The important INFOs, WARNings and ERRORs are written not only to the
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| 39 | # scriptlog but also to the processlog.
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| 40 | #
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| 41 | # The callisto.rc files are stored in the setup directory
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| 42 | #
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| 43 |
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| 44 | source `dirname $0`/sourcefile
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| 45 | printprocesslog "INFO starting $0"
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| 46 | program=callisto
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| 47 | column=fCallisto
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| 48 |
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| 49 | set -C
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| 50 |
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| 51 | scriptlog=$runlogpath/run$program-$datetime.log
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| 52 | date >> $scriptlog 2>&1
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| 53 |
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| 54 | # get sequence #
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| 55 | gettodo >> $scriptlog 2>&1
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| 56 | sequence=$process
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| 57 |
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| 58 | # lock sequ for cal
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| 59 | lockfile=$lockpath/lock-$table-$column-$sequence.txt
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| 60 | checklock >> $scriptlog 2>&1
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| 61 |
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| 62 | cd $mars
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| 63 |
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| 64 | # run calibration for sequence
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| 65 | echo "run $program for sequence $sequence..." >> $scriptlog 2>&1
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| 66 | printprocesslog "INFO starting $program for sequence $sequence"
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| 67 | no=`printf %08d $sequence | cut -c 0-4`
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| 68 | no2=`printf %08d $sequence`
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| 69 | outpath="$datapath/$program/$no/$no2"
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| 70 | makedir $outpath >> $scriptlog 2>&1
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| 71 | sequfile="$sequpath/$no/sequence$no2.txt"
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| 72 |
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| 73 | # stage the needed files; to be removed as soon as the correct stub file size has been determined
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| 74 | echo "staging files:" >> $scriptlog 2>&1
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| 75 | date=`grep Night $sequfile | cut -c 18-27 | sed -e "s/-/\//g"`
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| 76 | runs=`grep ^Runs $sequfile | cut -d: -f2`
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| 77 | i=0
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| 78 |
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| 79 | for run in ${runs[@]}
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| 80 | do
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| 81 | files[i]=20*_0*${run}_[PCD]_*_E.raw.gz
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| 82 | echo ${files[i]} >> $scriptlog 2>&1
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| 83 | let i++
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| 84 | done
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| 85 |
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| 86 | ssh -nx phoenix "cd $datapath/rawfiles/${date}; /opt/SUNWsamfs/bin/stage ${files[@]}"
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| 87 |
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| 88 |
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| 89 | # define callisto.rc files
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| 90 | callistorcnew=$setuppath/$program/callisto.rc
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| 91 | callistorcmux=$setuppath/$program/callisto_mux.rc
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| 92 | # find callisto.rc file
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| 93 | if [ -e $outpath/callisto.rc ]
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| 94 | then
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| 95 | echo "found $program.rc in $outpath -> using this " >> $scriptlog 2>&1
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| 96 | callistorcseq=$outpath/callisto.rc
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| 97 | else
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| 98 | echo "no $program.rc found in $outpath -> making link " >> $scriptlog 2>&1
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| 99 | if [ $sequence -gt 200000 ]
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| 100 | then
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| 101 | ln -vs $callistorcmux $outpath/callisto.rc >> $scriptlog 2>&1
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| 102 | else
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| 103 | ln -vs $callistorcnew $outpath/callisto.rc >> $scriptlog 2>&1
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| 104 | fi
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| 105 | callistorcseq=$outpath/callisto.rc
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| 106 | fi
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| 107 |
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| 108 | # lock sequ for zipping
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| 109 | lockfile=$lockpath/calzip$sequence.txt
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| 110 | # if lockfile is already existing, 1 is returned
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| 111 | if ! checklock return 1 >> $scriptlog 2>&1
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| 112 | then
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| 113 | # reset lockfile name
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| 114 | lockfile=$lockpath/lock-$table-$column-$sequence.txt
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| 115 | finish >> $scriptlog 2>&1
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| 116 | fi
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| 117 |
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| 118 | primvar=$no2
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| 119 | setstatus "start" >> $scriptlog 2>&1
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| 120 |
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| 121 | echo "./callisto -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --out=$outpath --config=$callistorcseq $sequfile 2>> $scriptlog > /dev/null" >> $scriptlog 2>&1
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| 122 | ./callisto -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --out=$outpath --config=$callistorcseq $sequfile 2>> $scriptlog > /dev/null
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| 123 | check1=$?
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| 124 |
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| 125 | # remove lockfile for zip and reset lockfile name
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| 126 | rm -v $lockfile >> $scriptlog 2>&1
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| 127 | lockfile=$lockpath/lock-$table-$column-$sequence.txt
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| 128 |
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| 129 | case $check1 in
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| 130 | 0) echo " check1=$check1 -> everything ok -> doing update..." >> $scriptlog 2>&1
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| 131 | printprocesslog "INFO $program finished successfully for sequence $sequence"
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| 132 | # running merpp update if calibration worked
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| 133 | # finding files, which have to be updated
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| 134 | echo "finding files to be updated..." >> $scriptlog 2>&1
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| 135 | calfiles=`find $outpath -name *_Y_* `
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| 136 | if [ "$calfiles" = "" ]
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| 137 | then
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| 138 | echo " no files found -> continue with next sequence" >> $scriptlog 2>&1
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| 139 | printprocesslog "ERROR no calfiles found"
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| 140 | fi
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| 141 | echo " files to be updated: "$calfiles >> $scriptlog 2>&1
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| 142 |
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| 143 | merpplogpath=$outpath"/merpplogs"
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| 144 | makedir $merpplogpath >> $scriptlog 2>&1
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| 145 |
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| 146 | printprocesslog "INFO doing merppupdate for sequence $sequence"
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| 147 | # updated calibrated data files with the information from the cc and caco files
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| 148 | for calfile in ${calfiles[@]}
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| 149 | do
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| 150 | echo "calfile: "$calfile >> $scriptlog 2>&1
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| 151 | # find cc and caco file
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| 152 | # if file is missing continue with next sequence
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| 153 | date=`date --date \`basename $calfile | cut -d_ -f1\` +%Y/%m/%d`
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| 154 | ccpath=$subsystempath/cc/$date
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| 155 | cacopath=$subsystempath/caco/$date
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| 156 | runno=`echo $calfile | cut -d_ -f2 | sed -e 's/^0//' | sed -e 's/^0//' | sed -e 's/^0//' `
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| 157 | ccfile=`find $ccpath -name 20[0-2][0-9][01][0-9][0-3][0-9]_*${runno}_[PDCS]_*_S.rep`
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| 158 | source=`echo $ccfile | cut -d_ -f4`
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| 159 | cacofile=`find /magic/subsystemdata/caco/$date -name dc_20[0-2][0-9]_[01][0-9]_[0-3][0-9]_*${runno}_${source}.txt`
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| 160 | if [ "$ccfile" = "" ]
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| 161 | then
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| 162 | echo "no ccfile found for run "$runno >> $scriptlog 2>&1
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| 163 | printprocesslog "ERROR ccfile $ccfile not found for $calfile"
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| 164 | com=$Fnoccfile
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| 165 | comadd=$runno
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| 166 | check=0
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| 167 | break
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| 168 | fi
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| 169 | if [ "$cacofile" = "" ]
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| 170 | then
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| 171 | echo "cacofile with no $runno not found" >> $scriptlog 2>&1
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| 172 | echo "finding cacofile..." >> $scriptlog 2>&1
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| 173 | for (( i = 0; i <= 10; i++ ))
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| 174 | do
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| 175 | newrun=`echo $runno - $i | bc`
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| 176 | cacofile=`find $cacopath -name *$newrun*`
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| 177 | if [ "$cacofile" = "" ]
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| 178 | then
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| 179 | if [ $i -eq 9 ]
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| 180 | then
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| 181 | echo "no cacofile found for runno $newrun in $cacopath" >> $scriptlog 2>&1
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| 182 | printprocesslog "ERROR cacofile $cacofile not found for $calfile"
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| 183 | com=$Fnocacofile
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| 184 | comadd=$runno
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| 185 | check=0
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| 186 | break 2
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| 187 | fi
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| 188 | continue
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| 189 | else
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| 190 | echo "cacofile: "$cacofile >> $scriptlog 2>&1
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| 191 | break
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| 192 | fi
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| 193 | done
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| 194 | fi
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| 195 | echo "./merpp -u --log=$merpplogpath/merppccupdate$runno.log --html=$merpplogpath/merppccupdate$runno.html --auto-time-stop --runfile=$runno $ccfile $calfile 2>> $scriptlog> /dev/null" >> $scriptlog 2>&1
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| 196 | ./merpp -u --log=$merpplogpath/merppccupdate$runno.log --html=$merpplogpath/merppccupdate$runno.html --auto-time-stop --runfile=$runno $ccfile $calfile 2>> $scriptlog> /dev/null
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| 197 | check2=$?
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| 198 | case $check2 in
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| 199 | 0) echo " check2=$check2 -> everything ok, merppccupdate worked -> continue" >> $scriptlog 2>&1
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| 200 | printprocesslog "INFO merppupdated $calfile sucessfully with $ccfile"
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| 201 | ;;
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| 202 | *) echo " check2=$check2 -> ERROR -> merppccupdate failed" >> $scriptlog 2>&1
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| 203 | printprocesslog "ERROR merppccupdate with file $ccfile failed for $calfile"
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| 204 | com=$Fmerppcc
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| 205 | comadd=$runno
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| 206 | check=$check2
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| 207 | break ;;
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| 208 | esac
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| 209 | echo "./merpp -u --log=$merpplogpath/merppcacoupdate$runno.log --html=$merpplogpath/merppcacoupdate$runno.html --auto-time $cacofile $calfile 2>> $scriptlog> /dev/null" >> $scriptlog 2>&1
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| 210 | ./merpp -u --log=$merpplogpath/merppcacoupdate$runno.log --html=$merpplogpath/merppcacoupdate$runno.html --auto-time $cacofile $calfile 2>> $scriptlog> /dev/null
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| 211 | check3=$?
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| 212 | case $check3 in
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| 213 | 0) echo " check3=$check3 -> everything ok, merppcacoupdate worked -> continue" >> $scriptlog 2>&1
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| 214 | printprocesslog "INFO merppupdated $calfile sucessfully with $cacofile"
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| 215 | ;;
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| 216 | *) echo " check3=$check3 -> ERROR -> merppcacoupdate failed" >> $scriptlog 2>&1
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| 217 | printprocesslog "ERROR merppcacoupdate with file $cacofile failed for $calfile"
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| 218 | com=$Fmerppcaco
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| 219 | comadd=$runno
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| 220 | check=$check3
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| 221 | break ;;
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| 222 | esac
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| 223 | done
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| 224 | printprocesslog "INFO finished merppupdate successfully for sequence $sequence"
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| 225 | ;;
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| 226 | *) echo " check1=$check1 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1
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| 227 | printprocesslog "ERROR $program failed for sequence $sequence (return code $check1)"
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| 228 | com=$Fcallisto
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| 229 | check=$check1
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| 230 | ;;
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| 231 | esac
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| 232 |
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| 233 | setstatus "stop" >> $scriptlog 2>&1
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| 234 |
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| 235 | finish >> $scriptlog 2>&1
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| 236 |
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