| 1 | #!/bin/sh
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| 2 | #
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| 3 | # ========================================================================
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| 4 | #
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| 5 | # *
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| 6 | # * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 7 | # * Software. It is distributed to you in the hope that it can be a useful
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| 8 | # * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 9 | # * It is distributed WITHOUT ANY WARRANTY.
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| 10 | # *
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| 11 | # * Permission to use, copy, modify and distribute this software and its
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| 12 | # * documentation for any purpose is hereby granted without fee,
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| 13 | # * provided that the above copyright notice appear in all copies and
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| 14 | # * that both that copyright notice and this permission notice appear
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| 15 | # * in supporting documentation. It is provided "as is" without express
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| 16 | # * or implied warranty.
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| 17 | # *
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| 18 | #
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| 19 | #
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| 20 | # Author(s): Daniela Dorner 08/2004 <mailto:dorner@astro.uni-wuerzburg.de>
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| 21 | #
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| 22 | # Copyright: MAGIC Software Development, 2000-2004
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| 23 | #
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| 24 | #
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| 25 | # ========================================================================
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| 26 | #
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| 27 | #
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| 28 |
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| 29 | export ROOTSYS=/opt/root_v3.10.02
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| 30 | export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$ROOTSYS/lib
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| 31 | export PATH=$PATH:$ROOTSYS/bin
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| 32 |
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| 33 | set -C
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| 34 |
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| 35 | mars=/home/operator/Mars
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| 36 | macrospath=$mars/datacenter/macros
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| 37 | scriptspath=$mars/datacenter/scripts
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| 38 |
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| 39 | table=SequenceProcessStatus
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| 40 | column=fStar
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| 41 | date=NULL
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| 42 | datetime=`date +%F-%H-%M-%S`
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| 43 | year=`date +%Y`
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| 44 | pno=8 # number of processes, i.e. number of todo-files
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| 45 |
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| 46 | todofile=/magic/datacenter/lists/ToDo-$table-$column
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| 47 | lockpath=/magic/datacenter/locks
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| 48 | logpath=/magic/datacenter/autologs
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| 49 | getstatuslogpath=$logpath/getstatus/star/$year
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| 50 | getstatuslog=$getstatuslogpath/getstatus-star-$datetime.log
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| 51 |
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| 52 | scriptlogpath=$logpath/run/star/`date +%Y/%m/%d`
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| 53 | if [ ! -d $scriptlogpath ]
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| 54 | then
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| 55 | mkdir -pv $scriptlogpath
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| 56 | if [ ! -d $scriptlogpath ]
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| 57 | then
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| 58 | echo "could not make scriptlogpath "$scriptlogpath
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| 59 | exit
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| 60 | fi
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| 61 | fi
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| 62 |
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| 63 | scriptlog=$scriptlogpath/runstar-$datetime.log
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| 64 |
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| 65 | date >> $scriptlog 2>&1
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| 66 |
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| 67 |
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| 68 | if [ ! -d $getstatuslogpath ]
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| 69 | then
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| 70 | mkdir -pv $getstatuslogpath >> $scriptlog 2>&1
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| 71 | if [ ! -d $getstatuslogpath ]
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| 72 | then
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| 73 | echo "could not make getstatuslogpath "$getstatuslogpath >> $scriptlog 2>&1
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| 74 | date >> $scriptlog 2>&1
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| 75 | exit
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| 76 | fi
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| 77 | fi
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| 78 |
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| 79 | cd $mars
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| 80 |
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| 81 | date > $lockpath/lock-getting-star-list.txt >> $scriptlog 2>&1
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| 82 | checklock0=$?
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| 83 | case $checklock0 in
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| 84 | 0) echo "checklock0=$checklock0 -> continue " >> $scriptlog 2>&1;;
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| 85 | 1) echo "checklock0=$checklock0 -> file exists " >> $scriptlog 2>&1
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| 86 | echo "-> getting list for star is running -> exit" >> $scriptlog 2>&1
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| 87 | date >> $scriptlog 2>&1
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| 88 | exit;;
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| 89 | *) echo "checklock0=$checklock0 -> something went completely wrong" >> $scriptlog 2>&1;;
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| 90 | esac
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| 91 |
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| 92 | echo "checking if other todo-files are there" >> $scriptlog 2>&1
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| 93 | if ls $todofile-[1-9].txt >> $scriptlog 2>&1
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| 94 | then
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| 95 | echo "other file(s) on disk " >> $scriptlog 2>&1
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| 96 | echo " -> choose one file and start calculation of image parameter" >> $scriptlog 2>&1
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| 97 | else
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| 98 | echo "getting list..." >> $scriptlog 2>&1
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| 99 | check0=`root -q -b $macrospath/getdolist.C+\("\"$table\""\,"\"$column\""\,"\"$date\""\) | tee $getstatuslog | grep int | sed -e 's/(int)//'`
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| 100 |
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| 101 | case $check0 in
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| 102 | 1) echo "check0=$check0 -> everthing ok -> run star" >> $scriptlog 2>&1;;
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| 103 | *) echo "check0=$check0 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1;;
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| 104 | esac
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| 105 | echo "cutting to-do-file" >> $scriptlog 2>&1
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| 106 | echo "getting no of lines" >> $scriptlog 2>&1
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| 107 | lines=`cat $todofile.txt | wc -l`
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| 108 | echo "number of lines: "$lines >> $scriptlog 2>&1
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| 109 | nofiles=`expr $lines / \( $pno - 1 \)`
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| 110 | echo "number of files: "$nofiles >> $scriptlog 2>&1
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| 111 | echo "deviding todo-file" >> $scriptlog 2>&1
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| 112 | for (( j=1 ; j <= $pno ; j++ ))
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| 113 | do
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| 114 | begin=$(echo "1 + ( ($j - 1) * $nofiles)" | bc -l)
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| 115 | end=$(echo "$begin + $nofiles - 1" | bc -l)
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| 116 | echo "begin: "$begin >> $scriptlog 2>&1
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| 117 | echo "end: "$end >> $scriptlog 2>&1
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| 118 | file=${todofile}-${j}.txt
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| 119 | echo "file: "$file >> $scriptlog 2>&1
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| 120 | sed -ne ''"$begin"','"$end"'w '"$file"'' $todofile.txt
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| 121 | done
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| 122 |
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| 123 | rm -v $todofile.txt >> $scriptlog 2>&1
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| 124 | fi
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| 125 |
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| 126 | rm -v $lockpath/lock-getting-star-list.txt >> $scriptlog 2>&1
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| 127 |
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| 128 | nr=bla
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| 129 | echo "finding the right todo-file" >> $scriptlog 2>&1
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| 130 | for (( i = 1; i <= $pno ; i++ ))
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| 131 | do
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| 132 | if ! ls $todofile-$i.txt >> $scriptlog 2>&1
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| 133 | then
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| 134 | echo "file is not on disk -> continue" >> $scriptlog 2>&1
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| 135 | continue
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| 136 | fi
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| 137 | date > $lockpath/lock-$table-$column-$i.txt >> $scriptlog 2>&1
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| 138 | checklock=$?
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| 139 | case $checklock in
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| 140 | 0) echo "checklock=$checklock -> setting number" >> $scriptlog 2>&1
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| 141 | nr=${i}
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| 142 | break;;
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| 143 | 1) echo "checklock=$checklock -> file exists -> continue" >> $scriptlog 2>&1;;
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| 144 | *) echo "checklock=$checklock -> something went completely wrong" >> $scriptlog 2>&1;;
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| 145 | esac
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| 146 | done
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| 147 |
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| 148 | case $nr in
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| 149 | bla) echo "everything is beeing processed -> exit" >> $scriptlog 2>&1
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| 150 | date >> $scriptlog 2>&1
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| 151 | exit;;
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| 152 | 12345678) echo "process nr: "$nr >> $scriptlog 2>&1;;
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| 153 | esac
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| 154 |
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| 155 |
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| 156 | sequences=(`cat $todofile-$nr.txt`)
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| 157 |
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| 158 | if [ "$sequences" = "" ]
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| 159 | then
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| 160 | echo "nothing to do -> exit" >> $scriptlog 2>&1
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| 161 | rm -v $todofile-$nr.txt >> $scriptlog 2>&1
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| 162 | rm -v $lockpath/lock-$table-$column-$nr.txt >> $scriptlog 2>&1
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| 163 | date >> $scriptlog 2>&1
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| 164 | exit
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| 165 | fi
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| 166 |
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| 167 | echo "sequences: "${sequences[@]} >> $scriptlog 2>&1
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| 168 |
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| 169 | for sequence in ${sequences[@]}
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| 170 | do
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| 171 | no=`printf %08d $sequence | cut -c 4`
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| 172 | outpath="/magic/data/star/"`printf %04d $no`"/"`printf %08d $sequence`
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| 173 | inpath=`echo $outpath | sed -e 's/star/callisto/'`
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| 174 | echo "inpath: "$inpath >> $scriptlog 2>&1
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| 175 | echo "outpath: "$outpath >> $scriptlog 2>&1
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| 176 | if [ ! -d $outpath ]
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| 177 | then
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| 178 | mkdir -pv $outpath >> $scriptlog 2>&1
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| 179 | if [ ! -d $outpath ]
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| 180 | then
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| 181 | echo "could not make outpath $outpath -> continue " >> $scriptlog 2>&1
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| 182 | continue
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| 183 | fi
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| 184 | fi
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| 185 | sequfile="/magic/sequences/"`printf %04d $no`"/sequence"`printf %08d $sequence`".txt"
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| 186 | echo "sequfile: "$sequfile >> $scriptlog 2>&1
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| 187 |
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| 188 | echo "run star..." >> $scriptlog 2>&1
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| 189 | ./star -b -q -f --log=$outpath/star$sequence.log --ind=$inpath --out=$outpath $sequfile 2>> $scriptlog> /dev/null
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| 190 | check1=$?
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| 191 |
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| 192 | case $check1 in
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| 193 | 0) echo "check1=$check1 -> everthing ok " >> $scriptlog 2>&1
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| 194 | echo "-> inserting the status for star for sequence $sequence into the db" >> $scriptlog 2>&1
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| 195 | setstatuslogpath=$logpath/setstatus/star/`printf %04d $no`
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| 196 | if [ ! -d $setstatuslogpath ]
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| 197 | then
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| 198 | mkdir -pv $setstatuslogpath >> $scriptlog 2>&1
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| 199 | if [ ! -d $setstatuslogpath ]
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| 200 | then
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| 201 | echo "could not make setstatuslogpath "$setstatuslogpath >> $scriptlog 2>&1
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| 202 | continue
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| 203 | fi
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| 204 | fi
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| 205 | setstatuslog=$setstatuslogpath/setstatus-star
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| 206 | check4=`root -q -b $macrospath/setstatus.C+\("\"$sequence\""\,"\"$table\""\,"\"$column\""\,"\"Now()\""\) | tee $setstatuslog-$sequence.log | grep int | sed -e 's/(int)//'`
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| 207 | case $check4 in
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| 208 | 1) echo "check4=$check4 -> everthing ok, status has been set" >> $scriptlog 2>&1;;
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| 209 | *) echo "check4=$check4 -> ERROR -> step could not be set" >> $scriptlog 2>&1;;
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| 210 | esac
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| 211 | ;;
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| 212 | *) echo "check1=$check1 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1;;
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| 213 | esac
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| 214 | done
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| 215 |
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| 216 | rm -v $todofile-$nr.txt >> $scriptlog 2>&1
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| 217 | rm -v $lockpath/lock-$table-$column-$nr.txt >> $scriptlog 2>&1
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| 218 |
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| 219 | set +C
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| 220 |
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| 221 | date >> $scriptlog 2>&1
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| 222 |
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