source: trunk/MagicSoft/Mars/datacenter/scripts/runstar@ 7815

Last change on this file since 7815 was 7815, checked in by Daniela Dorner, 18 years ago
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  • Property svn:executable set to *
File size: 4.6 KB
Line 
1#!/bin/sh
2#
3# ========================================================================
4#
5# *
6# * This file is part of MARS, the MAGIC Analysis and Reconstruction
7# * Software. It is distributed to you in the hope that it can be a useful
8# * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
9# * It is distributed WITHOUT ANY WARRANTY.
10# *
11# * Permission to use, copy, modify and distribute this software and its
12# * documentation for any purpose is hereby granted without fee,
13# * provided that the above copyright notice appear in all copies and
14# * that both that copyright notice and this permission notice appear
15# * in supporting documentation. It is provided "as is" without express
16# * or implied warranty.
17# *
18#
19#
20# Author(s): Daniela Dorner 08/2004 <mailto:dorner@astro.uni-wuerzburg.de>
21#
22# Copyright: MAGIC Software Development, 2000-2006
23#
24#
25# ========================================================================
26#
27# This script is launching star for sequence.
28#
29# In the case of star only one sequence is processed. Despite of
30# that the structure of the script is such, that also more sequences could
31# be processed. The restriction to one sequence has been made, as star
32# takes some time. There's one todo file per sequence.
33# First the script searches for a todo file. Then star is run for the
34# sequence from this todo file.
35#
36# the star.rc files are taken from the mars directory
37#
38
39program=star
40source /home/$USER/Mars/datacenter/scripts/sourcefile
41
42set -C
43
44table=SequenceProcessStatus
45column=fStar
46#pno=500 # number of processes, i.e. number of todo-files
47
48todofile=$listpath/ToDo-$table-$column
49lockfile=$lockpath/lock-getting-$program-list.txt
50
51scriptlogpath=$logpath/run/$program/`date +%Y/%m/%d`
52makedir $scriptlogpath
53scriptlog=$scriptlogpath/run$program-$datetime.log
54
55date >> $scriptlog 2>&1
56
57cd $mars
58
59# finding todo file
60echo "checking if other todo-files are there" >> $scriptlog 2>&1
61if ls $todofile-[1-9]*.txt >> $scriptlog 2>&1
62then
63 echo "other file(s) on disk " >> $scriptlog 2>&1
64 echo " -> choose one file and start calculation of image parameter" >> $scriptlog 2>&1
65else
66 # check if getting of list is already running
67 checklock "getting list of" >> $scriptlog 2>&1
68 # get todo list
69 getdolist >> $scriptlog 2>&1
70 rm -v $lockfile >> $scriptlog 2>&1
71fi
72
73# choosing todo file
74nr=bla
75echo "finding the right todo-file" >> $scriptlog 2>&1
76todofiles=`ls -r $listpath/ToDo-$table-$column-*`
77
78for todofile in ${todofiles[@]}
79do
80 if ! ls $todofile >> $scriptlog 2>&1
81 then
82 echo "file is not on disk -> continue" >> $scriptlog 2>&1
83 continue
84 fi
85 lockfile=`echo $todofile | sed -e 's/lists/locks/' -e 's/ToDo/lock/'`
86 date > $lockfile >> $scriptlog 2>&1
87 checklock=$?
88 case $checklock in
89 0) echo "checklock=$checklock -> setting number" >> $scriptlog 2>&1
90 nr=${i}
91 break;;
92 1) echo "checklock=$checklock -> file exists -> continue" >> $scriptlog 2>&1;;
93 *) echo "checklock=$checklock -> something went completely wrong" >> $scriptlog 2>&1;;
94 esac
95done
96
97case $nr in
98 bla) echo "everything is beeing processed -> exit" >> $scriptlog 2>&1
99 date >> $scriptlog 2>&1
100 exit;;
101 12345678) echo "process nr: "$nr >> $scriptlog 2>&1;;
102esac
103
104# retrieve sequence from todo file
105sequences=(`cat $todofile`)
106if [ "$sequences" = "" ]
107then
108 echo "nothing to do -> exit" >> $scriptlog 2>&1
109 finish >> $scriptlog 2>&1
110fi
111
112# run star for sequence
113echo "sequences: "${sequences[@]} >> $scriptlog 2>&1
114for sequence in ${sequences[@]}
115do
116 no=`printf %08d $sequence | cut -c 0-4`
117 no2=`printf %08d $sequence`
118 var1=$no
119 var2=$no2
120 outpath="$datapath/$program/$no/$no2"
121 inpath=`echo $outpath | sed -e 's/star/callisto/'`
122 echo "inpath: "$inpath >> $scriptlog 2>&1
123 echo "outpath: "$outpath >> $scriptlog 2>&1
124 makedir $outpath >> $scriptlog 2>&1
125
126 sequfile="$sequpath/$no/sequence$no2.txt"
127 echo "sequfile: "$sequfile >> $scriptlog 2>&1
128
129 echo "run $program..." >> $scriptlog 2>&1
130 setstatus "start" >> $scriptlog 2>&1
131
132 ./star -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --ind=$inpath --out=$outpath $sequfile 2>> $scriptlog> /dev/null
133 check1=$?
134
135 case $check1 in
136 0) echo "check1=$check1 -> everything ok " >> $scriptlog 2>&1;;
137 *) echo "check1=$check1 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1
138 com=$Fstar
139 check=$check1
140 ;;
141 esac
142 echo "inserting the status for $program for sequence $sequence into the db" >> $scriptlog 2>&1
143 setstatus "stop" >> $scriptlog 2>&1
144done
145
146finish >> $scriptlog 2>&1
147
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