1 | /* ======================================================================== *\
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2 | !
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3 | ! *
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4 | ! * This file is part of MARS, the MAGIC Analysis and Reconstruction
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5 | ! * Software. It is distributed to you in the hope that it can be a useful
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6 | ! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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7 | ! * It is distributed WITHOUT ANY WARRANTY.
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8 | ! *
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9 | ! * Permission to use, copy, modify and distribute this software and its
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10 | ! * documentation for any purpose is hereby granted without fee,
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11 | ! * provided that the above copyright notice appear in all copies and
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12 | ! * that both that copyright notice and this permission notice appear
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13 | ! * in supporting documentation. It is provided "as is" without express
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14 | ! * or implied warranty.
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15 | ! *
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16 | !
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17 | ! Author(s): Josep Flix, 01/2004 <mailto:jflix@ifae.es>
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18 | ! Javier Rico, 01/2004 <mailto:jrico@ifae.es>
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19 | ! Markus Gaug, 03/2004 <mailto:markus@ifae.es>
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20 | !
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21 | ! (based on bootcampstandardanalysis.C by Javier López)
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22 | !
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23 | !
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24 | ! Copyright: MAGIC Software Development, 2000-2004
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25 | !
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26 | !
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27 | \* ======================================================================== */
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28 | /////////////////////////////////////////////////////////////////////////////
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29 | //
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30 | // pedphotcalc.C
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31 | //
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32 | // This macro is an example of the use of MPedPhotCalc. It computes
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33 | // the pedestal mean and rms from pedestal files undergoing the
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34 | // signal extraction + calibration chain, in units of photons. It
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35 | // produces plots of the relevant computed quantities.
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36 | //
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37 | // Needs as arguments the run number of a pedestal file ("*_P_*.root"),
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38 | // one of a calibration file ("*_C_*.root").
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39 | // performs the pedestal calculation, the calibration
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40 | /// constants calculation and the calibration of the pedestals.
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41 | //
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42 | // The TString inpath has to be set correctly.
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43 | //
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44 | // The macro searches for the pulser colour which corresponds to the calibration
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45 | // run number. If the run number is smaller than 20000, pulser colour "CT1"
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46 | // is assumed, otherwise, it searches for the strings "green", "blue", "uv" or
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47 | // "ct1" in the filenames. If no colour or multiple colours are found, the
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48 | // execution is aborted.
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49 | //
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50 | ////////////////////////////////////////////////////////////////////////////////////
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51 | #include "MParList.h"
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52 | #include "MTaskList.h"
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53 | #include "MJPedestal.h"
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54 | #include "MJCalibration.h"
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55 | #include "MPedestalCam.h"
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56 | #include "MPedestalPix.h"
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57 | #include "MReadMarsFile.h"
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58 | #include "MGeomApply.h"
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59 | #include "MGeomCamMagic.h"
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60 | #include "MEvtLoop.h"
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61 | #include "MCalibrationCam.h"
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62 | #include "MCalibrationChargeCam.h"
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63 | #include "MCalibrationChargePix.h"
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64 | #include "MCalibrationQECam.h"
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65 | #include "MCalibrationQEPix.h"
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66 | #include "MExtractedSignalCam.h"
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67 | #include "MExtractSlidingWindow.h"
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68 | #include "MExtractFixedWindow.h"
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69 | #include "MCerPhotEvt.h"
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70 | #include "MCalibrate.h"
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71 | #include "MPedPhotCalc.h"
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72 | #include "MPedPhotCam.h"
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73 | #include "MPedPhotPix.h"
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74 | #include "MHCamera.h"
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75 | #include "MRunIter.h"
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76 | #include "MDirIter.h"
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77 | #include "MStatusDisplay.h"
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78 | #include "MHCamera.h"
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79 |
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80 | #include "TTimer.h"
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81 | #include "TString.h"
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82 | #include "TCanvas.h"
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83 | #include "TStyle.h"
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84 | #include "TF1.h"
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85 | #include "TLegend.h"
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86 |
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87 | #include <iostream.h>
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88 | #include "Getline.h"
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89 |
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90 | const TString inpath = "/mnt/Data/rootdata/CrabNebula/2004_02_10/";
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91 | const Int_t dpedrun = 14607;
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92 | const Int_t dcalrun1 = 14608;
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93 | const Int_t dcalrun2 = 0;
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94 | const Bool_t usedisplay = kTRUE;
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95 |
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96 |
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97 |
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98 | void DrawProjection(MHCamera *obj1, Int_t fit)
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99 | {
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100 | TH1D *obj2 = (TH1D*)obj1->Projection(obj1->GetName());
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101 | obj2->SetDirectory(0);
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102 | obj2->Draw();
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103 | obj2->SetBit(kCanDelete);
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104 | gPad->SetLogy();
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105 |
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106 | if (obj1->GetGeomCam().InheritsFrom("MGeomCamMagic"))
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107 | {
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108 | TArrayI s0(3);
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109 | s0[0] = 6;
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110 | s0[1] = 1;
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111 | s0[2] = 2;
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112 |
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113 | TArrayI s1(3);
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114 | s1[0] = 3;
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115 | s1[1] = 4;
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116 | s1[2] = 5;
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117 |
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118 | TArrayI inner(1);
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119 | inner[0] = 0;
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120 |
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121 | TArrayI outer(1);
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122 | outer[0] = 1;
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123 |
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124 | // Just to get the right (maximum) binning
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125 | TH1D *half[4];
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126 | half[0] = obj1->ProjectionS(s0, inner, "Sector 6-1-2 Inner");
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127 | half[1] = obj1->ProjectionS(s1, inner, "Sector 3-4-5 Inner");
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128 | half[2] = obj1->ProjectionS(s0, outer, "Sector 6-1-2 Outer");
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129 | half[3] = obj1->ProjectionS(s1, outer, "Sector 3-4-5 Outer");
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130 |
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131 | for (int i=0; i<4; i++)
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132 | {
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133 | half[i]->SetLineColor(kRed+i);
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134 | half[i]->SetDirectory(0);
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135 | half[i]->SetBit(kCanDelete);
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136 | half[i]->Draw("same");
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137 | }
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138 | }
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139 |
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140 | const Double_t min = obj2->GetBinCenter(obj2->GetXaxis()->GetFirst());
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141 | const Double_t max = obj2->GetBinCenter(obj2->GetXaxis()->GetLast());
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142 | const Double_t integ = obj2->Integral("width")/2.5066283;
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143 | const Double_t mean = obj2->GetMean();
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144 | const Double_t rms = obj2->GetRMS();
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145 | const Double_t width = max-min;
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146 |
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147 | if (rms==0 || width==0)
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148 | return;
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149 |
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150 | const TString dgausformula("([0]-[3])/[2]*exp(-0.5*(x-[1])*(x-[1])/[2]/[2])"
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151 | "+[3]/[5]*exp(-0.5*(x-[4])*(x-[4])/[5]/[5])");
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152 |
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153 | TF1 *f=0;
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154 | switch (fit)
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155 | {
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156 | // FIXME: MAYBE add function to TH1?
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157 | case 0:
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158 | f = new TF1("sgaus", "gaus(0)", min, max);
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159 | f->SetLineColor(kYellow);
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160 | f->SetBit(kCanDelete);
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161 | f->SetParNames("Area", "#mu", "#sigma");
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162 | f->SetParameters(integ/rms, mean, rms);
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163 | f->SetParLimits(0, 0, integ);
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164 | f->SetParLimits(1, min, max);
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165 | f->SetParLimits(2, 0, width/1.5);
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166 | obj2->Fit(f, "QLRM");
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167 | break;
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168 |
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169 | case 1:
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170 | f = new TF1("dgaus", dgausformula, min, max);
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171 | f->SetLineColor(kYellow);
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172 | f->SetBit(kCanDelete);
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173 | f->SetParNames("A_{tot}", "#mu_{1}", "#sigma_{1}", "A_{2}", "#mu_{2}", "#sigma_{2}");
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174 | f->SetParameters(integ, (min+mean)/2, width/4,
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175 | integ/width/2, (max+mean)/2, width/4);
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176 | // The left-sided Gauss
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177 | f->SetParLimits(0, integ-1.5, integ+1.5);
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178 | f->SetParLimits(1, min+(width/10), mean);
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179 | f->SetParLimits(2, 0, width/2);
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180 | // The right-sided Gauss
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181 | f->SetParLimits(3, 0, integ);
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182 | f->SetParLimits(4, mean, max-(width/10));
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183 | f->SetParLimits(5, 0, width/2);
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184 | obj2->Fit(f, "QLRM");
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185 | break;
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186 |
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187 | default:
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188 | obj2->Fit("gaus", "Q");
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189 | obj2->GetFunction("gaus")->SetLineColor(kYellow);
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190 | break;
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191 | }
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192 | }
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193 |
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194 | void CamDraw(TCanvas &c, Int_t x, Int_t y, MHCamera &cam1, Int_t fit)
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195 | {
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196 | c.cd(x);
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197 | gPad->SetBorderMode(0);
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198 | MHCamera *obj1=(MHCamera*)cam1.DrawCopy("hist");
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199 |
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200 | c.cd(x+y);
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201 | gPad->SetBorderMode(0);
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202 | obj1->Draw();
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203 |
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204 | c.cd(x+2*y);
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205 | gPad->SetBorderMode(0);
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206 | DrawProjection(obj1, fit);
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207 | }
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208 |
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209 | void pedphotcalc(const Int_t prun=dpedrun, // pedestal file
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210 | const Int_t crun1=dcalrun1, const Int_t crun2=dcalrun2 // calibration file(s)
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211 | )
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212 | {
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213 |
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214 | MExtractFixedWindow extractor;
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215 |
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216 | MRunIter pruns;
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217 | MRunIter cruns;
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218 |
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219 | pruns.AddRun(prun,inpath);
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220 |
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221 | if (crun2==0)
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222 | cruns.AddRun(crun1,inpath);
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223 | else
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224 | cruns.AddRuns(crun1,crun2,inpath);
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225 |
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226 | //
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227 | // Now setup the tasks and tasklist for the pedestals:
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228 | // ---------------------------------------------------
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229 | //
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230 | MGeomCamMagic geomcam;
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231 | MGeomApply geomapl;
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232 | MStatusDisplay *display = NULL;
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233 |
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234 | /************************************/
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235 | /* FIRST LOOP: PEDESTAL COMPUTATION */
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236 | /************************************/
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237 |
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238 | MJPedestal pedloop;
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239 | pedloop.SetInput(&pruns);
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240 | if (usedisplay)
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241 | {
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242 | display = new MStatusDisplay;
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243 | display->SetUpdateTime(3000);
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244 | display->Resize(850,700);
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245 | display->SetBit(kCanDelete);
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246 | pedloop.SetDisplay(display);
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247 | }
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248 |
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249 | cout << "*************************" << endl;
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250 | cout << "** COMPUTING PEDESTALS **" << endl;
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251 | cout << "*************************" << endl;
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252 |
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253 | if (!pedloop.Process())
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254 | return;
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255 |
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256 | MPedestalCam pedcam = pedloop.GetPedestalCam();
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257 |
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258 | /****************************/
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259 | /* SECOND LOOP: CALIBRATION */
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260 | /****************************/
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261 |
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262 | //
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263 | // Now setup the new tasks for the calibration:
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264 | // ---------------------------------------------------
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265 | //
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266 | MJCalibration calloop;
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267 | calloop.SetInput(&cruns);
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268 | //
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269 | // Use as signal extractor MExtractSignal:
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270 | //
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271 | calloop.SetExtractor(&extractor);
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272 | //
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273 | // The next two commands are for the display:
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274 | //
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275 | if (usedisplay)
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276 | {
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277 | calloop.SetDisplay(display);
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278 | calloop.SetDataCheck();
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279 | }
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280 |
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281 | cout << "***********************************" << endl;
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282 | cout << "** COMPUTING CALIBRATION FACTORS **" << endl;
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283 | cout << "***********************************" << endl;
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284 |
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285 | if (!calloop.Process(pedcam))
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286 | return;
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287 |
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288 | MCalibrationChargeCam &calcam = calloop.GetCalibrationCam();
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289 | MCalibrationQECam &qecam = calloop.GetQECam();
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290 |
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291 | /************************************************************************/
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292 | /* THIRD LOOP: PEDESTAL COMPUTATION USING EXTRACTED SIGNAL (IN PHOTONS) */
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293 | /************************************************************************/
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294 |
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295 | // Create an empty Parameter List and an empty Task List
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296 | MParList plist3;
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297 | MTaskList tlist3;
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298 | plist3.AddToList(&tlist3);
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299 |
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300 | // containers
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301 | MCerPhotEvt photcam;
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302 | MPedPhotCam pedphotcam;
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303 | MExtractedSignalCam extedsig;
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304 |
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305 | plist3.AddToList(&geomcam);
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306 | plist3.AddToList(&pedcam );
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307 | plist3.AddToList(&calcam );
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308 | plist3.AddToList(&qecam );
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309 | plist3.AddToList(&photcam);
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310 | plist3.AddToList(&extedsig);
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311 | plist3.AddToList(&pedphotcam);
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312 |
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313 | //tasks
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314 | MReadMarsFile read3("Events");
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315 | read3.DisableAutoScheme();
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316 | static_cast<MRead&>(read3).AddFiles(pruns);
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317 |
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318 | MCalibrate photcalc;
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319 | photcalc.SetCalibrationMode(MCalibrate::kFfactor);
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320 | MPedPhotCalc pedphotcalc;
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321 |
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322 | tlist3.AddToList(&read3);
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323 | tlist3.AddToList(&geomapl);
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324 | tlist3.AddToList(&extractor);
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325 | tlist3.AddToList(&photcalc);
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326 | tlist3.AddToList(&pedphotcalc);
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327 |
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328 | // Create and execute eventloop
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329 | MEvtLoop evtloop3;
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330 | evtloop3.SetParList(&plist3);
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331 |
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332 | cout << "*************************************************************" << endl;
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333 | cout << "** COMPUTING PEDESTALS USING EXTRACTED SIGNAL (IN PHOTONS) **" << endl;
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334 | cout << "*************************************************************" << endl;
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335 |
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336 | if (!evtloop3.Eventloop())
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337 | return;
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338 | tlist3.PrintStatistics();
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339 |
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340 | /**********************/
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341 | /* PRODUCE NICE PLOTS */
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342 | /**********************/
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343 |
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344 | if (usedisplay)
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345 | {
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346 |
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347 | MHCamera disp0(geomcam, "MPedPhotCam;ped", "Pedestals");
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348 | MHCamera disp1(geomcam, "MPedPhotCam;rms", "Sigma Pedestal");
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349 |
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350 | disp0.SetCamContent(pedphotcam, 0);
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351 | disp0.SetCamError (pedphotcam, 1);
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352 |
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353 | disp1.SetCamContent(pedphotcam, 1);
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354 |
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355 | disp0.SetYTitle("Pedestal signal [photons]");
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356 | disp1.SetYTitle("Pedestal signal RMS [photons]");
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357 |
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358 | //
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359 | // Display data
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360 | //
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361 | TCanvas &c1 = display->AddTab("PedPhotCam");
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362 | c1.Divide(2,3);
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363 |
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364 | CamDraw(c1, 1, 2, disp0, 0);
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365 | CamDraw(c1, 2, 2, disp1, 1);
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366 |
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367 | }
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368 |
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369 |
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370 | #if 0
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371 | const UShort_t npix = 577;
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372 |
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373 | // declare histograms
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374 | // pedestals
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375 | TH1F* pedhist = new TH1F("pedhist","Pedestal",npix,0,npix);
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376 | TH1F* pedrmshist = new TH1F("pedrmshist","Pedestal RMS",npix,0,npix);
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377 | TH1F* peddist = new TH1F("peddist","Pedestal",100,0,20);
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378 | TH1F* pedrmsdist = new TH1F("pedrmsdist","Pedestal RMS",100,0,15);
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379 |
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380 | // calibration factors
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381 | TH1F* calhist = new TH1F("calhist","Calibration factors",npix,0,npix);
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382 | TH1F* caldist = new TH1F("caldist","Calibration factors",100,0,1);
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383 | TH1F* qehist = new TH1F("qehist", "Quantrum efficiencies",npix,0,npix);
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384 | TH1F* qedist = new TH1F("qedist", "Quantrum efficiencies",100,0,1);
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385 |
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386 | // pedestal signals
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387 | TH1F* pedphothist = new TH1F("pedphothist","Pedestal Signal",npix,0,npix);
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388 | TH1F* pedphotrmshist = new TH1F("pedphotrmshist","Pedestal Signal RMS",npix,0,npix);
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389 | TH1F* pedphotdist = new TH1F("pedphotdist","Pedestal Signal",100,-0.4,0.4);
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390 | TH1F* pedphotrmsdist = new TH1F("pedphotrmsdist","Pedestal Signal RMS",100,0,25);
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391 |
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392 | // fill histograms
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393 | for(int i=0;i<npix;i++)
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394 | {
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395 | MCalibrationChargePix &calpix = (MCalibrationChargePix&)calcam[i];
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396 | MCalibrationQEPix &qepix = (MCalibrationQEPix&) qecam[i];
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397 |
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398 | const Float_t ped = pedcam[i].GetPedestal();
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399 | const Float_t pedrms = pedcam[i].GetPedestalRms();
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400 | const Float_t cal = calpix.GetMeanConvFADC2Phe();
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401 | const Float_t qe = qepix .GetQECascadesFFactor();
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402 | const Float_t pedphot = pedphotcam[i].GetMean();
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403 | const Float_t pedphotrms = pedphotcam[i].GetRms();
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404 |
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405 | pedhist->Fill(i,ped);
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406 | peddist->Fill(ped);
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407 | pedrmshist->Fill(i,pedrms);
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408 | pedrmsdist->Fill(pedrms);
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409 |
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410 | calhist->Fill(i,cal);
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411 | caldist->Fill(cal);
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412 | qehist->Fill(i,qe);
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413 | qedist->Fill(qe);
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414 |
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415 | pedphothist->Fill(i,pedphot);
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416 | pedphotdist->Fill(pedphot);
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417 | pedphotrmshist->Fill(i,pedphotrms);
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418 | pedphotrmsdist->Fill(pedphotrms);
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419 | }
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420 |
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421 | // Draw
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422 | gROOT->Reset();
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423 | gStyle->SetCanvasColor(0);
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424 | TCanvas* canvas = new TCanvas("canvas","pedphotcalc.C", 0, 100, 650, 800);
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425 | canvas->SetBorderMode(0); // Delete the Canvas' border line
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426 | canvas->cd();
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427 |
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428 | canvas->Divide(2,5);
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429 |
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430 | // draw pedestal histo
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431 | canvas->cd(1);
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432 | gPad->cd();
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433 | gPad->SetBorderMode(0);
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434 |
|
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435 | pedhist->SetStats(kFALSE);
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436 | pedhist->GetXaxis()->SetTitle("Pixel SW Id");
|
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437 | pedhist->GetYaxis()->SetTitle("Pedestal (ADC counts)");
|
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438 | pedrmshist->SetStats(kFALSE);
|
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439 | pedrmshist->SetLineColor(2);
|
---|
440 | pedhist->Draw();
|
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441 | pedrmshist->Draw("same");
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442 |
|
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443 | TLegend* leg1 = new TLegend(.14,.68,.39,.88);
|
---|
444 | leg1->SetHeader("");
|
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445 | leg1->AddEntry(pedhist,"Pedestal","L");
|
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446 | leg1->AddEntry(pedrmshist,"Pedestal RMS","L");
|
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447 | leg1->SetFillColor(0);
|
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448 | leg1->SetLineColor(0);
|
---|
449 | leg1->SetBorderSize(0);
|
---|
450 | leg1->Draw();
|
---|
451 |
|
---|
452 | // draw pedestal distribution
|
---|
453 | canvas->cd(2);
|
---|
454 | gPad->cd();
|
---|
455 | gPad->SetBorderMode(0);
|
---|
456 | peddist->GetXaxis()->SetTitle("Pedestal (ADC counts)");
|
---|
457 | pedrmsdist->SetLineColor(2);
|
---|
458 | peddist->Draw();
|
---|
459 | pedrmsdist->Draw("same");
|
---|
460 |
|
---|
461 | TLegend* leg2 = new TLegend(.14,.68,.39,.88);
|
---|
462 | leg2->SetHeader("");
|
---|
463 | leg2->AddEntry(pedhist,"Pedestal","L");
|
---|
464 | leg2->AddEntry(pedrmshist,"Pedestal RMS","L");
|
---|
465 | leg2->SetFillColor(0);
|
---|
466 | leg2->SetLineColor(0);
|
---|
467 | leg2->SetBorderSize(0);
|
---|
468 | leg2->Draw();
|
---|
469 |
|
---|
470 | // draw calibration histo
|
---|
471 | canvas->cd(3);
|
---|
472 | gPad->cd();
|
---|
473 | gPad->SetBorderMode(0);
|
---|
474 | calhist->GetXaxis()->SetTitle("Pixel SW Id");
|
---|
475 | calhist->SetMaximum(1);
|
---|
476 | calhist->SetMinimum(0);
|
---|
477 | calhist->GetYaxis()->SetTitle("Calibration factor (phe/ADC count)");
|
---|
478 | calhist->SetStats(kFALSE);
|
---|
479 | calhist->Draw();
|
---|
480 |
|
---|
481 | // draw calibration distribution
|
---|
482 | canvas->cd(4);
|
---|
483 | gPad->cd();
|
---|
484 | gPad->SetBorderMode(0);
|
---|
485 | caldist->GetXaxis()->SetTitle("Calibration factor (phe/ADC count)");
|
---|
486 | caldist->Draw();
|
---|
487 |
|
---|
488 | // draw qe histo
|
---|
489 | canvas->cd(5);
|
---|
490 | gPad->cd();
|
---|
491 | gPad->SetBorderMode(0);
|
---|
492 | qehist->GetXaxis()->SetTitle("Pixel SW Id");
|
---|
493 | qehist->SetMaximum(1);
|
---|
494 | qehist->SetMinimum(0);
|
---|
495 | qehist->GetYaxis()->SetTitle("Quantum efficiency for cascades");
|
---|
496 | qehist->SetStats(kFALSE);
|
---|
497 | qehist->Draw();
|
---|
498 |
|
---|
499 | // draw qe distribution
|
---|
500 | canvas->cd(6);
|
---|
501 | gPad->cd();
|
---|
502 | gPad->SetBorderMode(0);
|
---|
503 | qedist->GetXaxis()->SetTitle("Quantum efficiency for cascades");
|
---|
504 | qedist->Draw();
|
---|
505 |
|
---|
506 | // draw pedestal signal histo
|
---|
507 | canvas->cd(7);
|
---|
508 | gPad->cd();
|
---|
509 | gPad->SetBorderMode(0);
|
---|
510 | pedphothist->GetXaxis()->SetTitle("Pixel SW Id");
|
---|
511 | pedphothist->GetYaxis()->SetTitle("Pedestal signal (photons)");
|
---|
512 | pedphothist->SetStats(kFALSE);
|
---|
513 | pedphothist->Draw();
|
---|
514 |
|
---|
515 | // draw pedestal signal distribution
|
---|
516 | canvas->cd(8);
|
---|
517 | gPad->cd();
|
---|
518 | gPad->SetBorderMode(0);
|
---|
519 | pedphotdist->GetXaxis()->SetTitle("Pedestal signal (photons)");
|
---|
520 | pedphotdist->Draw();
|
---|
521 |
|
---|
522 | // draw pedestal signal rms histo
|
---|
523 | canvas->cd(9);
|
---|
524 | gPad->cd();
|
---|
525 | gPad->SetBorderMode(0);
|
---|
526 | pedphotrmshist->GetXaxis()->SetTitle("Pixel SW Id");
|
---|
527 | pedphotrmshist->GetYaxis()->SetTitle("Pedestal signal rms (photons)");
|
---|
528 | pedphotrmshist->SetStats(kFALSE);
|
---|
529 | pedphotrmshist->Draw();
|
---|
530 |
|
---|
531 | // draw pedestal signal rms distribution
|
---|
532 | canvas->cd(10);
|
---|
533 | gPad->cd();
|
---|
534 | gPad->SetBorderMode(0);
|
---|
535 | pedphotrmsdist->GetXaxis()->SetTitle("Pedestal signal rms (photons)");
|
---|
536 | pedphotrmsdist->Draw();
|
---|
537 |
|
---|
538 | canvas->SaveAs("pedphotcalc.root");
|
---|
539 |
|
---|
540 | #endif
|
---|
541 | }
|
---|