| 1 | /* ======================================================================== *\
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| 2 | !
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| 3 | ! *
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| 4 | ! * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 5 | ! * Software. It is distributed to you in the hope that it can be a useful
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| 6 | ! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 7 | ! * It is distributed WITHOUT ANY WARRANTY.
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| 8 | ! *
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| 9 | ! * Permission to use, copy, modify and distribute this software and its
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| 10 | ! * documentation for any purpose is hereby granted without fee,
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| 11 | ! * provided that the above copyright notice appear in all copies and
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| 12 | ! * that both that copyright notice and this permission notice appear
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| 13 | ! * in supporting documentation. It is provided "as is" without express
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| 14 | ! * or implied warranty.
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| 15 | ! *
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| 16 | !
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| 17 | !
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| 18 | ! Author(s): Thomas Bretz 12/2000 (tbretz@uni-sw.gwdg.de)
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| 19 | !
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| 20 | ! Copyright: MAGIC Software Development, 2000-2001
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| 21 | !
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| 22 | !
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| 23 | \* ======================================================================== */
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| 24 |
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| 25 | /////////////////////////////////////////////////////////////////////////////
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| 26 | // //
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| 27 | // MReadTree //
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| 28 | // //
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| 29 | // This tasks opens all branches in a specified tree and creates the //
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| 30 | // corresponding parameter containers if not already existing in the //
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| 31 | // parameter list. //
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| 32 | // //
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| 33 | // The Process function reads one events from the tree. To go through the //
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| 34 | // events of one tree make sure that the event number is increased from //
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| 35 | // outside. It makes also possible to go back by decreasing the number. //
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| 36 | // //
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| 37 | // If you don't want to start reading the first event you have to call //
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| 38 | // MReadTree::SetEventNum after instantiating your MReadTree-object. //
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| 39 | // //
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| 40 | /////////////////////////////////////////////////////////////////////////////
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| 41 |
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| 42 | #include "MReadTree.h"
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| 43 |
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| 44 | #include <fstream.h>
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| 45 |
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| 46 | #include <TFile.h>
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| 47 | #include <TChain.h>
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| 48 | #include <TArrayC.h>
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| 49 | #include <TObjArray.h>
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| 50 | #include <TChainElement.h>
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| 51 |
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| 52 | #include "MLog.h"
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| 53 | #include "MLogManip.h"
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| 54 |
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| 55 | #include "MTime.h"
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| 56 | #include "MParList.h"
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| 57 |
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| 58 | ClassImp(MReadTree);
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| 59 |
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| 60 | // --------------------------------------------------------------------------
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| 61 | //
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| 62 | // Default constructor. It creates an TChain instance which represents the
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| 63 | // the Tree you want to read and adds the given file (if you gave one).
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| 64 | // More files can be added using MReadTree::AddFile.
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| 65 | // Also an empty veto list is created. This list is used if you want to
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| 66 | // veto (disable or "don't enable") a branch in the tree.
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| 67 | //
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| 68 | MReadTree::MReadTree(const char *tname, const char *fname,
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| 69 | const char *name, const char *title) : fNumEntry(0)
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| 70 | {
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| 71 | *fName = name ? name : "MReadTree";
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| 72 | *fTitle = title ? title : "Task to loop over all events in one single tree";
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| 73 |
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| 74 | fVetoList = new TArrayC;
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| 75 | //
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| 76 | // open the input stream
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| 77 | //
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| 78 | fChain = new TChain(tname);
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| 79 |
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| 80 | if (fname)
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| 81 | fChain->Add(fname);
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| 82 | }
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| 83 |
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| 84 | // --------------------------------------------------------------------------
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| 85 | //
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| 86 | // Destructor. It deletes the TChain and veto list object
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| 87 | //
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| 88 | MReadTree::~MReadTree()
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| 89 | {
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| 90 | //
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| 91 | // Delete all the pointers to pointers to the objects where the
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| 92 | // branche data gets stored.
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| 93 | //
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| 94 | TIter Next(fChain->GetStatus());
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| 95 |
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| 96 | TChainElement *element = NULL;
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| 97 | while ((element=(TChainElement*)Next()))
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| 98 | delete (MParContainer**)element->GetBaddress();
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| 99 |
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| 100 | //
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| 101 | // Delete the chain and the veto list
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| 102 | //
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| 103 | delete fChain;
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| 104 | delete fVetoList;
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| 105 | }
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| 106 |
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| 107 | // --------------------------------------------------------------------------
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| 108 | //
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| 109 | // If you want to read the given tree over several files you must add
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| 110 | // the files here before PreProcess is called. Be careful: If the tree
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| 111 | // doesn't have the same contents (branches) it may confuse your
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| 112 | // program (trees which are are not existing in later files are not read
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| 113 | // anymore, tree wich are not existing in the first file are never read)
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| 114 | //
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| 115 | /*Int_t*/ void MReadTree::AddFile(const char *fname)
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| 116 | {
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| 117 | //
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| 118 | // FIXME! A check is missing whether the file already exists or not.
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| 119 | //
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| 120 | //
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| 121 | // returns the number of file which were added
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| 122 | //
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| 123 | /*return root >3.0*/ fChain->Add(fname);
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| 124 | }
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| 125 |
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| 126 | // --------------------------------------------------------------------------
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| 127 | //
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| 128 | // The PreProcess loops (till now) over the branches in the given tree.
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| 129 | // It checks if the corresponding containers (containers with the same
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| 130 | // name than the branch name) are existing in the Parameter Container List.
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| 131 | // If not, a container of objec type 'branch-name' is created (everything
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| 132 | // after the last semicolon in the branch name is stripped). Only
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| 133 | // branches which don't have a veto (see VetoBranch) are enabled If the
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| 134 | // object isn't found in the root dictionary (a list of classes known by the
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| 135 | // root environment) the branch is skipped and an error message is printed
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| 136 | // out.
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| 137 | //
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| 138 | Bool_t MReadTree::PreProcess (MParList *pList)
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| 139 | {
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| 140 | //
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| 141 | // get number of events in this tree
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| 142 | //
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| 143 | fNumEntries = (UInt_t)fChain->GetEntries();
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| 144 |
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| 145 | if (!fNumEntries)
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| 146 | {
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| 147 | *fLog << dbginf << "No Entries found in chain (file/s)." << endl;
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| 148 | return kFALSE;
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| 149 | }
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| 150 |
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| 151 | //
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| 152 | // output logging information
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| 153 | //
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| 154 | *fLog << fNumEntries << " Entries found in file(s)." << endl;
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| 155 |
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| 156 | //
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| 157 | // Get all branches of this tree and
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| 158 | // create the Iterator to loop over all branches
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| 159 | //
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| 160 | TIter Next(fChain->GetListOfBranches());
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| 161 | TBranch *branch=NULL;
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| 162 |
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| 163 | //
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| 164 | // loop over all tasks for processing
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| 165 | //
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| 166 | while ( (branch=(TBranch*)Next()) )
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| 167 | {
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| 168 | //
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| 169 | // Get Name of Branch
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| 170 | //
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| 171 | const char *name = branch->GetName();
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| 172 |
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| 173 | //
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| 174 | // Check if enabeling the branch is allowed
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| 175 | //
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| 176 | if (HasVeto(name))
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| 177 | continue;
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| 178 |
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| 179 | //
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| 180 | // Create a pointer to the pointer to the object in which the
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| 181 | // branch data is stored. The pointers are stored in the TChain
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| 182 | // object and we get the pointers from there to delete it.
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| 183 | //
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| 184 | MParContainer **pcont = new MParContainer*;
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| 185 |
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| 186 | //
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| 187 | // check if object is existing in the list
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| 188 | //
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| 189 | *pcont=pList->FindCreateObj(name);
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| 190 |
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| 191 | if (!*pcont)
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| 192 | {
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| 193 | //
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| 194 | // if class is not existing in the (root) environment
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| 195 | // we cannot proceed reading this branch
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| 196 | //
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| 197 | *fLog << dbginf << "Warning: Class '" << name << "' not existing in dictionary. Branch skipped." << endl;
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| 198 | continue;
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| 199 | }
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| 200 |
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| 201 | //
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| 202 | // here pcont is a pointer the to container in which the data from
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| 203 | // the actual branch should be stored - enable branch.
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| 204 | //
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| 205 | fChain->SetBranchAddress(name, pcont);
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| 206 | }
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| 207 |
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| 208 | return kTRUE;
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| 209 | }
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| 210 |
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| 211 | // --------------------------------------------------------------------------
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| 212 | //
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| 213 | // The Process-function reads one event from the tree (this contains all
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| 214 | // enabled branches) and increases the position in the file by one event.
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| 215 | // (Remark: The position can also be set by some member functions
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| 216 | // If the end of the file is reached the Eventloop is stopped.
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| 217 | //
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| 218 | Bool_t MReadTree::Process()
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| 219 | {
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| 220 | //
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| 221 | // check for end of file
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| 222 | //
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| 223 | if (fNumEntry>=fNumEntries)
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| 224 | return kFALSE;
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| 225 |
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| 226 | //
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| 227 | // get entry
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| 228 | //
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| 229 | fChain->GetEntry(fNumEntry);
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| 230 | cout << " " << fChain->LoadTree(fNumEntry) << " "<<flush;
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| 231 |
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| 232 | fNumEntry++;
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| 233 |
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| 234 | return kTRUE;
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| 235 | }
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| 236 |
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| 237 | // --------------------------------------------------------------------------
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| 238 | //
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| 239 | // Get the Event with the current EventNumber fNumEntry
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| 240 | //
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| 241 | Bool_t MReadTree::GetEvent()
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| 242 | {
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| 243 | fChain->GetEntry(fNumEntry);
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| 244 |
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| 245 | return kTRUE;
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| 246 | }
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| 247 |
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| 248 | // --------------------------------------------------------------------------
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| 249 | //
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| 250 | // Decrease the number of the event which is read by Process() next
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| 251 | // by one or more
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| 252 | //
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| 253 | Bool_t MReadTree::DecEventNum(UInt_t dec)
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| 254 | {
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| 255 | //!
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| 256 | //! this function makes Process() read the event one (or more) before
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| 257 | //! the actual position (event) in the tree
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| 258 | //!
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| 259 | if (fNumEntry < dec/*+1*/)
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| 260 | {
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| 261 | *fLog << "MReadTree::SetPrevEvent: WARNING: " << fNumEntry/*-1*/ << "-" << dec << " out of Range." << endl;
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| 262 | return kFALSE;
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| 263 | }
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| 264 |
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| 265 | fNumEntry -= dec/*+1*/;
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| 266 | return kTRUE;
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| 267 | }
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| 268 |
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| 269 | // --------------------------------------------------------------------------
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| 270 | //
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| 271 | // Increase the number of the event which is read by Process() next
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| 272 | // by one or more
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| 273 | //
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| 274 | Bool_t MReadTree::IncEventNum(UInt_t inc)
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| 275 | {
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| 276 | //!
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| 277 | //! this function makes Process() read the next (or more) after
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| 278 | //! the actual position (event) in the tree
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| 279 | //! (Be careful: IncEventNum() or IncEventNum(1) does not chenge anything
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| 280 | //! in the standard behaviour of the task)
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| 281 | //!
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| 282 | if (fNumEntry+inc/*-1*/ >= fNumEntries)
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| 283 | {
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| 284 | *fLog << "MReadTree::SkipEvents: WARNING: " << fNumEntry/*-1*/ << "+" << inc << " out of Range." << endl;
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| 285 | return kFALSE;
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| 286 | }
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| 287 |
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| 288 | fNumEntry += inc/*-1*/;
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| 289 | return kTRUE;
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| 290 | }
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| 291 |
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| 292 | // --------------------------------------------------------------------------
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| 293 | //
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| 294 | // this function makes Process() read event number nr next
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| 295 | //
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| 296 | // Remark: You can use this function after instatiating you MReadTree-object
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| 297 | // to set the event number from which you want to start reading.
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| 298 | //
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| 299 | Bool_t MReadTree::SetEventNum(UInt_t nr)
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| 300 | {
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| 301 | if (nr>=fNumEntries)
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| 302 | {
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| 303 | *fLog << "MReadTree::SetEventNum: WARNING: " << nr << " out of Range." << endl;
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| 304 | return kFALSE;
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| 305 | }
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| 306 |
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| 307 | fNumEntry = nr;
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| 308 | return kTRUE;
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| 309 | }
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| 310 |
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| 311 | // --------------------------------------------------------------------------
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| 312 | //
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| 313 | // This function checks if the Branch Name is part of the Veto List.
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| 314 | // This means, that the preprocess doesn't enable the branch.
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| 315 | //
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| 316 | Bool_t MReadTree::HasVeto(const char *name) const
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| 317 | {
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| 318 | const size_t nlen = strlen(name)+1;
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| 319 |
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| 320 | char *pos = fVetoList->GetArray();
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| 321 | size_t len = fVetoList->GetSize();
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| 322 |
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| 323 | //
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| 324 | // now we compare the 'strings' in the list word by word
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| 325 | // (string or word in this context means a zero terminated
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| 326 | // array of chars
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| 327 | //
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| 328 |
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| 329 | for (;;)
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| 330 | {
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| 331 | //
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| 332 | // Search for the first byte of the name
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| 333 | //
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| 334 | char *c = (char*)memchr(pos, name[0], len);
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| 335 |
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| 336 | //
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| 337 | // if we don't find the first byte, the list cannot contain 'name'
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| 338 | //
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| 339 | if (!c)
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| 340 | return kFALSE;
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| 341 |
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| 342 | //
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| 343 | // calculate and check how many bytes remains in the list
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| 344 | //
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| 345 | len -= c-pos;
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| 346 |
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| 347 | //
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| 348 | // if there are not enough bytes to match the query we are done
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| 349 | //
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| 350 | if (len<nlen)
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| 351 | return kFALSE;
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| 352 |
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| 353 | //
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| 354 | // check if the next 'nlen' byte (including the trailing '\0'
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| 355 | // are matching
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| 356 | //
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| 357 | if (!memcmp(c, name, nlen))
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| 358 | return kTRUE;
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| 359 |
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| 360 | //
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| 361 | // we didn't find the string, goto the next 'string'
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| 362 | //
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| 363 | pos = (char*)memchr(c, '\0', len);
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| 364 |
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| 365 | //
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| 366 | // check if there is a 'next' string really
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| 367 | //
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| 368 | if (!pos)
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| 369 | return kFALSE;
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| 370 |
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| 371 | //
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| 372 | // calculate the remaining length
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| 373 | //
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| 374 | len -= pos-c;
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| 375 |
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| 376 | //
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| 377 | // if there are not enough bytes to match the query we are done
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| 378 | //
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| 379 | if (len<nlen)
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| 380 | return kFALSE;
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| 381 | }
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| 382 | }
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| 383 |
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| 384 |
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| 385 | // --------------------------------------------------------------------------
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| 386 | //
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| 387 | // If you don't want that a branch is enabled within the PreProcess you
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| 388 | // can set a veto for enabeling the branch. (This means also the
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| 389 | // corresponding object won't be created automatically)
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| 390 | //
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| 391 | // This functionality is for experienced users which don't want to
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| 392 | // read in branches which are not processed in the program (for
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| 393 | // speed reasons)
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| 394 | //
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| 395 | void MReadTree::VetoBranch(const char *name)
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| 396 | {
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| 397 | //
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| 398 | // Add this file as the last entry of the list
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| 399 | // (including the trailing '\0')
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| 400 | //
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| 401 | const int sz = fVetoList->GetSize();
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| 402 | const int tsz = strlen(name)+1;
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| 403 |
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| 404 | fVetoList->Set(sz+tsz);
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| 405 |
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| 406 | memcpy(fVetoList->GetArray()+sz, name, tsz);
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| 407 | }
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