| 1 | /* ======================================================================== *\
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| 2 | !
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| 3 | ! *
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| 4 | ! * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 5 | ! * Software. It is distributed to you in the hope that it can be a useful
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| 6 | ! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 7 | ! * It is distributed WITHOUT ANY WARRANTY.
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| 8 | ! *
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| 9 | ! * Permission to use, copy, modify and distribute this software and its
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| 10 | ! * documentation for any purpose is hereby granted without fee,
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| 11 | ! * provided that the above copyright notice appear in all copies and
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| 12 | ! * that both that copyright notice and this permission notice appear
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| 13 | ! * in supporting documentation. It is provided "as is" without express
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| 14 | ! * or implied warranty.
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| 15 | ! *
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| 16 | !
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| 17 | !
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| 18 | ! Author(s): Markus Gaug 04/2004 <mailto:markus@ifae.es>
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| 19 | !
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| 20 | ! Copyright: MAGIC Software Development, 2000-2004
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| 21 | !
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| 22 | !
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| 23 | \* ======================================================================== */
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| 24 |
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| 25 | //////////////////////////////////////////////////////////////////////////////
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| 26 | //
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| 27 | // MCalibrationRelTimeCalc
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| 28 | //
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| 29 | // Task to finalize the relative time calibration obtained
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| 30 | // from the fit results to the summed FADC slice distributions delivered by
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| 31 | // MCalibrationRelTimeCam, calculated and filled by MHCalibrationRelTimeCam,
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| 32 | //
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| 33 | // PreProcess(): Initialize pointers to MCalibrationRelTimeCam,
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| 34 | //
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| 35 | // ReInit(): Initializes pointer to MBadPixelsCam
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| 36 | //
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| 37 | // Process(): Nothing to be done, histograms getting filled by MHCalibrationChargeCam
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| 38 | //
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| 39 | // PostProcess(): - FinalizeRelTimes()
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| 40 | // - FinalizeBadPixels()
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| 41 | //
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| 42 | // Input Containers:
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| 43 | // MCalibrationRelTimeCam
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| 44 | // MBadPixelsCam
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| 45 | // MGeomCam
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| 46 | //
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| 47 | // Output Containers:
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| 48 | // MCalibrationRelTimeCam
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| 49 | // MBadPixelsCam
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| 50 | //
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| 51 | //
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| 52 | //////////////////////////////////////////////////////////////////////////////
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| 53 | #include "MCalibrationRelTimeCalc.h"
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| 54 |
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| 55 | #include "MLog.h"
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| 56 | #include "MLogManip.h"
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| 57 |
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| 58 | #include "MParList.h"
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| 59 |
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| 60 | #include "MGeomCam.h"
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| 61 | #include "MGeomPix.h"
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| 62 |
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| 63 | #include "MCalibrationRelTimeCam.h"
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| 64 | #include "MCalibrationRelTimePix.h"
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| 65 |
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| 66 | #include "MBadPixelsCam.h"
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| 67 | #include "MBadPixelsPix.h"
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| 68 |
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| 69 |
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| 70 | ClassImp(MCalibrationRelTimeCalc);
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| 71 |
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| 72 | using namespace std;
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| 73 |
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| 74 | const Float_t MCalibrationRelTimeCalc::fgRelTimeResolutionLimit = 0.75;
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| 75 | // --------------------------------------------------------------------------
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| 76 | //
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| 77 | // Default constructor.
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| 78 | //
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| 79 | // Sets all pointers to NULL
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| 80 | //
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| 81 | // Initializes:
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| 82 | // - fRelTimeResolutionLimit to fgRelTimeResolutionimit
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| 83 | // - fOutputPath to "."
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| 84 | // - fOutputFile to "TimeCalibStat.txt"
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| 85 | //
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| 86 | // Calls:
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| 87 | // - Clear()
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| 88 | //
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| 89 | MCalibrationRelTimeCalc::MCalibrationRelTimeCalc(const char *name, const char *title)
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| 90 | : fBadPixels(NULL), fCam(NULL), fGeom(NULL)
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| 91 | {
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| 92 |
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| 93 | fName = name ? name : "MCalibrationRelTimeCalc";
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| 94 | fTitle = title ? title : "Task to finalize the relative time calibration";
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| 95 |
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| 96 | SetRelTimeResolutionLimit();
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| 97 | SetOutputPath();
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| 98 | SetOutputFile("");
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| 99 |
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| 100 | Clear();
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| 101 |
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| 102 | }
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| 103 |
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| 104 | // --------------------------------------------------------------------------
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| 105 | //
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| 106 | // Sets:
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| 107 | // - all flags to kFALSE
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| 108 | //
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| 109 | void MCalibrationRelTimeCalc::Clear(const Option_t *o)
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| 110 | {
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| 111 | SkipHiLoGainCalibration( kFALSE );
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| 112 | }
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| 113 |
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| 114 |
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| 115 | // -----------------------------------------------------------------------------------
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| 116 | //
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| 117 | // The following containers are searched and created if they were not found:
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| 118 | //
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| 119 | // - MBadPixelsCam
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| 120 | //
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| 121 | Int_t MCalibrationRelTimeCalc::PreProcess(MParList *pList)
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| 122 | {
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| 123 |
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| 124 |
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| 125 | fBadPixels = (MBadPixelsCam*)pList->FindCreateObj("MBadPixelsCam");
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| 126 | if (!fBadPixels)
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| 127 | {
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| 128 | *fLog << err << "Could not find or create MBadPixelsCam ... aborting." << endl;
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| 129 | return kFALSE;
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| 130 | }
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| 131 |
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| 132 |
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| 133 |
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| 134 | return kTRUE;
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| 135 | }
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| 136 |
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| 137 |
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| 138 | // --------------------------------------------------------------------------
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| 139 | //
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| 140 | // Search for the following input containers and abort if not existing:
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| 141 | // - MGeomCam
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| 142 | // - MCalibrationRelTimeCam
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| 143 | //
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| 144 | // It defines the PixId of every pixel in:
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| 145 | //
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| 146 | // - MCalibrationRelTimeCam
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| 147 | //
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| 148 | // It sets all pixels in excluded which have the flag fBadBixelsPix::IsBad() set in:
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| 149 | //
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| 150 | // - MCalibrationRelTimePix
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| 151 | //
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| 152 | Bool_t MCalibrationRelTimeCalc::ReInit(MParList *pList )
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| 153 | {
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| 154 |
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| 155 | fGeom = (MGeomCam*)pList->FindObject("MGeomCam");
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| 156 | if (!fGeom)
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| 157 | {
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| 158 | *fLog << err << "No MGeomCam found... aborting." << endl;
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| 159 | return kFALSE;
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| 160 | }
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| 161 |
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| 162 | fCam = (MCalibrationRelTimeCam*)pList->FindObject("MCalibrationRelTimeCam");
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| 163 | if (!fCam)
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| 164 | {
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| 165 | *fLog << err << "Cannot find MCalibrationRelTimeCam... aborting" << endl;
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| 166 | *fLog << err << "Maybe you forget to call an MFillH for the MHCalibrationRelTimeCam before..." << endl;
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| 167 | return kFALSE;
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| 168 | }
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| 169 |
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| 170 |
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| 171 | UInt_t npixels = fGeom->GetNumPixels();
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| 172 |
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| 173 | for (UInt_t i=0; i<npixels; i++)
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| 174 | {
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| 175 |
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| 176 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*fCam) [i];
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| 177 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 178 |
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| 179 | pix.SetPixId(i);
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| 180 |
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| 181 | if (bad.IsBad())
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| 182 | {
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| 183 | pix.SetExcluded();
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| 184 | continue;
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| 185 | }
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| 186 |
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| 187 | }
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| 188 |
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| 189 | return kTRUE;
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| 190 | }
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| 191 |
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| 192 | // ----------------------------------------------------------------------------------
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| 193 | //
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| 194 | // Nothing to be done in Process, but have a look at MHCalibrationRelTimeCam, instead
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| 195 | //
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| 196 | Int_t MCalibrationRelTimeCalc::Process()
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| 197 | {
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| 198 | return kTRUE;
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| 199 | }
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| 200 |
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| 201 | // -----------------------------------------------------------------------
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| 202 | //
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| 203 | // Return if number of executions is null.
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| 204 | //
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| 205 | // First loop over pixels, average areas and sectors, call:
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| 206 | // - FinalizeRelTimes()
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| 207 | // for every entry. Count number of valid pixels in loop and return kFALSE
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| 208 | // if there are none (the "Michele check").
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| 209 | //
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| 210 | // Call FinalizeBadPixels()
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| 211 | //
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| 212 | // Call MParContainer::SetReadyToSave() for fCam
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| 213 | //
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| 214 | // Print out some statistics
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| 215 | //
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| 216 | Int_t MCalibrationRelTimeCalc::PostProcess()
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| 217 | {
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| 218 |
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| 219 | if (GetNumExecutions()==0)
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| 220 | return kFALSE;
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| 221 |
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| 222 | //
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| 223 | // First loop over pixels, call FinalizePedestals and FinalizeRelTimes
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| 224 | //
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| 225 | FinalizeRelTimes();
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| 226 |
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| 227 | //
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| 228 | // Finalize Bad Pixels
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| 229 | //
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| 230 | FinalizeBadPixels();
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| 231 |
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| 232 | //
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| 233 | // Re-direct the output to an ascii-file from now on:
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| 234 | //
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| 235 | MLog *asciilog = fOutputFile.IsNull() ? 0 : new MLog;
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| 236 | if (asciilog)
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| 237 | {
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| 238 | asciilog->SetOutputFile(GetOutputFile(),kTRUE);
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| 239 | SetLogStream(asciilog);
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| 240 | }
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| 241 |
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| 242 | //
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| 243 | // Finalize calibration statistics
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| 244 | //
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| 245 | FinalizeUnsuitablePixels();
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| 246 |
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| 247 | fCam ->SetReadyToSave();
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| 248 | fBadPixels->SetReadyToSave();
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| 249 |
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| 250 | *fLog << inf << endl;
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| 251 | *fLog << GetDescriptor() << ": Errors statistics:" << endl;
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| 252 |
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| 253 | PrintUncalibrated(MBadPixelsPix::kDeviatingTimeResolution,
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| 254 | Form("%s%2.1f%s","Time resolution less than ",fRelTimeResolutionLimit," FADC slices from Mean: "));
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| 255 | PrintUncalibrated(MBadPixelsPix::kRelTimeOscillating,
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| 256 | "Pixels with changing Rel. Times over time: ");
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| 257 | PrintUncalibrated(MBadPixelsPix::kRelTimeNotFitted,
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| 258 | "Pixels with unsuccesful Gauss fit to the times: ");
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| 259 |
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| 260 | if (asciilog)
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| 261 | {
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| 262 | SetLogStream(&gLog);
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| 263 | delete asciilog;
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| 264 | }
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| 265 |
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| 266 | return kTRUE;
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| 267 | }
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| 268 |
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| 269 |
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| 270 | // ----------------------------------------------------------------------------------------------------
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| 271 | //
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| 272 | //
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| 273 | // First loop: Calculate a mean and mean RMS of time resolution per area index
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| 274 | // Include only pixels which are not MBadPixelsPix::kUnsuitableRun or
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| 275 | // MBadPixelsPix::kUnreliableRun (see FinalizeBadPixels())
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| 276 | //
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| 277 | // Second loop: Exclude those deviating by more than fRelTimeResolutionLimit FADC slices
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| 278 | // from the mean (obtained in first loop). Set
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| 279 | // MBadPixelsPix::kDeviatingTimeResolution if excluded.
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| 280 | //
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| 281 | void MCalibrationRelTimeCalc::FinalizeRelTimes()
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| 282 | {
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| 283 |
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| 284 | const UInt_t npixels = fGeom->GetNumPixels();
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| 285 | const UInt_t nareas = fGeom->GetNumAreas();
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| 286 |
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| 287 | TArrayF lowlim (nareas);
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| 288 | TArrayF upplim (nareas);
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| 289 | TArrayF areasum (nareas);
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| 290 | // Float_t areasum2 [nareas];
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| 291 | TArrayI numareavalid (nareas);
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| 292 | TArrayI useunreliable(nareas);
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| 293 |
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| 294 | //
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| 295 | // Apero loop: Count number of unreliable pixels:
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| 296 | //
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| 297 | for (UInt_t i=0; i<npixels; i++)
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| 298 | {
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| 299 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 300 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 301 |
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| 302 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 303 | continue;
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| 304 |
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| 305 | if (bad.IsUnsuitable(MBadPixelsPix::kUnreliableRun))
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| 306 | continue;
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| 307 |
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| 308 | numareavalid[aidx] ++;
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| 309 | }
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| 310 |
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| 311 | for (UInt_t aidx=0; aidx<nareas; aidx++)
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| 312 | if (numareavalid[aidx] < 100)
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| 313 | useunreliable[aidx] = 1;
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| 314 |
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| 315 | numareavalid.Reset();
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| 316 | //
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| 317 | // First loop: Get mean time resolution the RMS
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| 318 | // The loop is only to recognize later pixels with very deviating numbers
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| 319 | //
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| 320 | for (UInt_t i=0; i<npixels; i++)
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| 321 | {
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| 322 |
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| 323 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*fCam)[i];
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| 324 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 325 |
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| 326 | if (pix.IsExcluded())
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| 327 | continue;
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| 328 |
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| 329 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 330 | continue;
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| 331 |
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| 332 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 333 |
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| 334 | if (!useunreliable[aidx])
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| 335 | if (bad.IsUnsuitable(MBadPixelsPix::kUnreliableRun))
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| 336 | continue;
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| 337 |
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| 338 | const Float_t res = pix.GetTimePrecision();
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| 339 |
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| 340 | areasum [aidx] += res;
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| 341 | // areasum2 [aidx] += res*res;
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| 342 | numareavalid[aidx] ++;
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| 343 | }
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| 344 |
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| 345 |
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| 346 | for (UInt_t aidx=0; aidx<nareas; aidx++)
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| 347 | {
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| 348 | if (numareavalid[aidx] < 20)
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| 349 | {
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| 350 | *fLog << warn << GetDescriptor() << ": Less than 20 pixels with valid time resolution found "
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| 351 | << "in area index: " << aidx << endl;
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| 352 | continue;
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| 353 | }
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| 354 |
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| 355 | // Calculate the rms out of sum2:
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| 356 | /*
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| 357 | areasum2[aidx] = (areasum2[aidx] - areasum[aidx]*areasum[aidx]/numareavalid[aidx]);
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| 358 | areasum2[aidx] /= (numareavalid[aidx]-1.);
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| 359 | */
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| 360 | areasum [aidx] /= numareavalid[aidx];
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| 361 | lowlim [aidx] = 0.;
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| 362 | upplim [aidx] = areasum [aidx] + fRelTimeResolutionLimit;
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| 363 |
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| 364 | }
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| 365 | *fLog << endl;
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| 366 |
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| 367 |
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| 368 | for (UInt_t i=0; i<npixels; i++)
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| 369 | {
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| 370 |
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| 371 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*fCam)[i];
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| 372 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 373 |
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| 374 | if (pix.IsExcluded())
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| 375 | continue;
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| 376 |
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| 377 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 378 | continue;
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| 379 |
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| 380 | const Float_t res = pix.GetTimePrecision();
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| 381 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 382 |
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| 383 | if ( res < lowlim[aidx] || res > upplim[aidx] )
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| 384 | {
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| 385 | *fLog << warn << GetDescriptor() << ": Deviating time resolution: "
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| 386 | << Form("%4.2f",res) << " out of accepted limits: ["
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| 387 | << Form("%4.2f%s%4.2f",lowlim[aidx],",",upplim[aidx]) << "] in pixel " << i << endl;
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| 388 | bad.SetUncalibrated( MBadPixelsPix::kDeviatingTimeResolution);
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| 389 | pix.SetExcluded();
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| 390 | }
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| 391 | }
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| 392 | }
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| 393 |
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| 394 |
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| 395 | // -----------------------------------------------------------------------------------
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| 396 | //
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| 397 | // Sets pixel to MBadPixelsPix::kUnsuitableRun, if one of the following flags is set:
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| 398 | // - MBadPixelsPix::kRelTimeIsPedestal
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| 399 | // - MBadPixelsPix::kRelTimeErrNotValid
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| 400 | // - MBadPixelsPix::kRelTimeRelErrNotValid
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| 401 | //
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| 402 | // - Call MCalibrationPix::SetExcluded() for the bad pixels
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| 403 | //
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| 404 | void MCalibrationRelTimeCalc::FinalizeBadPixels()
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| 405 | {
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| 406 |
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| 407 | for (Int_t i=0; i<fBadPixels->GetSize(); i++)
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| 408 | {
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| 409 |
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| 410 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 411 | MCalibrationPix &pix = (*fCam)[i];
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| 412 |
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| 413 | if (bad.IsUncalibrated( MBadPixelsPix::kDeviatingTimeResolution))
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| 414 | bad.SetUnsuitable( MBadPixelsPix::kUnsuitableRun );
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| 415 |
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| 416 | if (bad.IsUncalibrated( MBadPixelsPix::kRelTimeNotFitted))
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| 417 | bad.SetUnsuitable( MBadPixelsPix::kUnreliableRun );
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| 418 |
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| 419 | if (bad.IsUncalibrated( MBadPixelsPix::kRelTimeOscillating))
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| 420 | bad.SetUnsuitable( MBadPixelsPix::kUnreliableRun );
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| 421 |
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| 422 | if (bad.IsUnsuitable( MBadPixelsPix::kUnsuitableRun ))
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| 423 | pix.SetExcluded();
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| 424 |
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| 425 | }
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| 426 | }
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| 427 |
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| 428 |
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| 429 | // -----------------------------------------------------------------------------------------------
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| 430 | //
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| 431 | // - Print out statistics about BadPixels of type UnsuitableType_t
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| 432 | // - store numbers of bad pixels of each type in fCam
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| 433 | //
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| 434 | void MCalibrationRelTimeCalc::FinalizeUnsuitablePixels()
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| 435 | {
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| 436 |
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| 437 | *fLog << inf << endl;
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| 438 | *fLog << GetDescriptor() << ": Rel. Times Calibration status:" << endl;
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| 439 | *fLog << dec << setfill(' ');
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| 440 |
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| 441 | const Int_t nareas = fGeom->GetNumAreas();
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| 442 |
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| 443 | TArrayI counts(nareas);
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| 444 |
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| 445 | for (Int_t i=0; i<fBadPixels->GetSize(); i++)
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| 446 | {
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| 447 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 448 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 449 | {
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| 450 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 451 | counts[aidx]++;
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| 452 | }
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| 453 | }
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| 454 |
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| 455 | for (Int_t aidx=0; aidx<nareas; aidx++)
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| 456 | fCam->SetNumUnsuitable(counts[aidx], aidx);
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| 457 |
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| 458 | if (fGeom->InheritsFrom("MGeomCamMagic"))
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| 459 | *fLog << " " << setw(7) << "Uncalibrated Pixels: "
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| 460 | << Form("%s%3i%s%3i","Inner: ",counts[0]," Outer: ",counts[1]) << endl;
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| 461 |
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| 462 | counts.Reset();
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| 463 |
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| 464 | for (Int_t i=0; i<fBadPixels->GetSize(); i++)
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| 465 | {
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| 466 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 467 | if (bad.IsUnsuitable(MBadPixelsPix::kUnreliableRun))
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| 468 | {
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| 469 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 470 | counts[aidx]++;
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| 471 | }
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| 472 | }
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| 473 |
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| 474 | for (Int_t aidx=0; aidx<nareas; aidx++)
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| 475 | fCam->SetNumUnreliable(counts[aidx], aidx);
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| 476 |
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| 477 | *fLog << " " << setw(7) << "Unreliable Pixels: "
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| 478 | << Form("%s%3i%s%3i","Inner: ",counts[0]," Outer: ",counts[1]) << endl;
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| 479 |
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| 480 | }
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| 481 |
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| 482 | // -----------------------------------------------------------------------------------------------
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| 483 | //
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| 484 | // Print out statistics about BadPixels of type UncalibratedType_t
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| 485 | //
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| 486 | void MCalibrationRelTimeCalc::PrintUncalibrated(MBadPixelsPix::UncalibratedType_t typ, const char *text) const
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| 487 | {
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| 488 |
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| 489 | UInt_t countinner = 0;
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| 490 | UInt_t countouter = 0;
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| 491 | for (Int_t i=0; i<fBadPixels->GetSize(); i++)
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| 492 | {
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| 493 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 494 | if (bad.IsUncalibrated(typ))
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| 495 | {
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| 496 | if (fGeom->GetPixRatio(i) == 1.)
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| 497 | countinner++;
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| 498 | else
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| 499 | countouter++;
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| 500 | }
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| 501 | }
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| 502 |
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| 503 | *fLog << " " << setw(7) << text
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| 504 | << Form("%s%3i%s%3i","Inner: ",countinner," Outer: ",countouter) << endl;
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| 505 | }
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| 506 |
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| 507 | // --------------------------------------------------------------------------
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| 508 | //
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| 509 | // Set the path for output file
|
|---|
| 510 | //
|
|---|
| 511 | void MCalibrationRelTimeCalc::SetOutputPath(TString path)
|
|---|
| 512 | {
|
|---|
| 513 | fOutputPath = path;
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| 514 | if (fOutputPath.EndsWith("/"))
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| 515 | fOutputPath = fOutputPath(0, fOutputPath.Length()-1);
|
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| 516 | }
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| 517 |
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| 518 | // --------------------------------------------------------------------------
|
|---|
| 519 | //
|
|---|
| 520 | // Get the output file
|
|---|
| 521 | //
|
|---|
| 522 | const char* MCalibrationRelTimeCalc::GetOutputFile()
|
|---|
| 523 | {
|
|---|
| 524 | return Form("%s/%s", (const char*)fOutputPath, (const char*)fOutputFile);
|
|---|
| 525 | }
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