| 1 | /* ======================================================================== *\
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| 2 | !
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| 3 | ! *
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| 4 | ! * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 5 | ! * Software. It is distributed to you in the hope that it can be a useful
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| 6 | ! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 7 | ! * It is distributed WITHOUT ANY WARRANTY.
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| 8 | ! *
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| 9 | ! * Permission to use, copy, modify and distribute this software and its
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| 10 | ! * documentation for any purpose is hereby granted without fee,
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| 11 | ! * provided that the above copyright notice appear in all copies and
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| 12 | ! * that both that copyright notice and this permission notice appear
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| 13 | ! * in supporting documentation. It is provided "as is" without express
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| 14 | ! * or implied warranty.
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| 15 | ! *
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| 16 | !
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| 17 | !
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| 18 | ! Author(s): Markus Gaug 04/2004 <mailto:markus@ifae.es>
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| 19 | !
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| 20 | ! Copyright: MAGIC Software Development, 2000-2004
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| 21 | !
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| 22 | !
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| 23 | \* ======================================================================== */
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| 24 |
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| 25 | //////////////////////////////////////////////////////////////////////////////
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| 26 | //
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| 27 | // MCalibrationRelTimeCalc
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| 28 | //
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| 29 | // Task to finalize the relative time calibration obtained
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| 30 | // from the fit results to the summed FADC slice distributions delivered by
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| 31 | // MCalibrationRelTimeCam, calculated and filled by MHCalibrationRelTimeCam,
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| 32 | //
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| 33 | // PreProcess(): Initialize pointers to MCalibrationRelTimeCam,
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| 34 | //
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| 35 | // ReInit(): Initializes pointer to MBadPixelsCam
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| 36 | //
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| 37 | // Process(): Nothing to be done, histograms getting filled by MHCalibrationChargeCam
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| 38 | //
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| 39 | // PostProcess(): - FinalizeRelTimes()
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| 40 | // - FinalizeBadPixels()
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| 41 | //
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| 42 | // Class Version 2:
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| 43 | // + Byte_t fCheckFlags; // Bit-field to hold the possible check flags
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| 44 | //
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| 45 | // ClassVersionb 3:
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| 46 | // - TString fOutputPath; // Path to the output file
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| 47 | // - TString fOutputFile; // Name of the output file
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| 48 | //
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| 49 | //
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| 50 | // Input Containers:
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| 51 | // MCalibrationRelTimeCam
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| 52 | // MBadPixelsCam
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| 53 | // MGeomCam
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| 54 | //
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| 55 | // Output Containers:
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| 56 | // MCalibrationRelTimeCam
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| 57 | // MBadPixelsCam
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| 58 | //
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| 59 | //
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| 60 | //////////////////////////////////////////////////////////////////////////////
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| 61 | #include "MCalibrationRelTimeCalc.h"
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| 62 |
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| 63 | #include "MLog.h"
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| 64 | #include "MLogManip.h"
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| 65 |
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| 66 | #include "MParList.h"
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| 67 |
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| 68 | #include "MStatusDisplay.h"
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| 69 |
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| 70 | #include "MGeomCam.h"
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| 71 | #include "MGeomPix.h"
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| 72 |
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| 73 | #include "MCalibrationIntensityRelTimeCam.h"
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| 74 | #include "MCalibrationRelTimeCam.h"
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| 75 | #include "MCalibrationRelTimePix.h"
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| 76 |
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| 77 | #include "MBadPixelsCam.h"
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| 78 | #include "MBadPixelsPix.h"
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| 79 |
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| 80 | ClassImp(MCalibrationRelTimeCalc);
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| 81 |
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| 82 | using namespace std;
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| 83 |
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| 84 | const Float_t MCalibrationRelTimeCalc::fgRelTimeResolutionLimit = 0.05;
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| 85 |
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| 86 | // --------------------------------------------------------------------------
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| 87 | //
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| 88 | // Default constructor.
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| 89 | //
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| 90 | // Sets all pointers to NULL
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| 91 | //
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| 92 | // Initializes:
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| 93 | // - fRelTimeResolutionLimit to fgRelTimeResolutionimit
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| 94 | //
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| 95 | // Calls:
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| 96 | // - Clear()
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| 97 | //
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| 98 | MCalibrationRelTimeCalc::MCalibrationRelTimeCalc(const char *name, const char *title)
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| 99 | : fGeom(NULL), fFlags(0)
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| 100 | {
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| 101 |
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| 102 | fName = name ? name : "MCalibrationRelTimeCalc";
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| 103 | fTitle = title ? title : "Task to finalize the relative time calibration";
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| 104 |
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| 105 | SetCheckFitResults ( kFALSE );
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| 106 | SetCheckDeviatingBehavior( kFALSE );
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| 107 | SetCheckHistOverflow ( kFALSE );
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| 108 | SetCheckOscillations ( kFALSE );
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| 109 |
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| 110 | SetRelTimeResolutionLimit();
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| 111 |
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| 112 | Clear();
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| 113 |
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| 114 | }
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| 115 |
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| 116 | // --------------------------------------------------------------------------
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| 117 | //
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| 118 | // Sets:
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| 119 | // - all flags to kFALSE
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| 120 | // - all pointers to NULL
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| 121 | //
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| 122 | void MCalibrationRelTimeCalc::Clear(const Option_t *o)
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| 123 | {
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| 124 |
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| 125 | fBadPixels = NULL;
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| 126 | fCam = NULL;
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| 127 | fIntensCam = NULL;
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| 128 |
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| 129 | }
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| 130 |
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| 131 | // --------------------------------------------------------------------------
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| 132 | //
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| 133 | // Search for the following input containers and abort if not existing:
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| 134 | // - MGeomCam
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| 135 | // - MCalibrationIntensityRelTimeCam or MCalibrationRelTimeCam
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| 136 | // - MBadPixelsCam
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| 137 | //
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| 138 | // It defines the PixId of every pixel in:
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| 139 | //
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| 140 | // - MCalibrationRelTimeCam
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| 141 | //
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| 142 | // It sets all pixels in excluded which have the flag fBadBixelsPix::IsBad() set in:
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| 143 | //
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| 144 | // - MCalibrationRelTimePix
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| 145 | //
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| 146 | Bool_t MCalibrationRelTimeCalc::ReInit(MParList *pList )
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| 147 | {
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| 148 |
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| 149 | fGeom = (MGeomCam*)pList->FindObject("MGeomCam");
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| 150 | if (!fGeom)
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| 151 | {
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| 152 | *fLog << err << "No MGeomCam found... aborting." << endl;
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| 153 | return kFALSE;
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| 154 | }
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| 155 |
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| 156 | fBadPixels = (MBadPixelsCam*)pList->FindObject(AddSerialNumber("MBadPixelsCam"));
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| 157 | if (!fBadPixels)
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| 158 | {
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| 159 | *fLog << err << "Cannot find MBadPixelsCam ... abort." << endl;
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| 160 | return kFALSE;
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| 161 | }
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| 162 |
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| 163 | fIntensCam = (MCalibrationIntensityRelTimeCam*)pList->FindObject(AddSerialNumber("MCalibrationIntensityRelTimeCam"));
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| 164 | if (fIntensCam)
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| 165 | *fLog << inf << "Found MCalibrationIntensityRelTimeCam ... " << endl;
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| 166 | else
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| 167 | {
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| 168 | fCam = (MCalibrationRelTimeCam*)pList->FindObject(AddSerialNumber("MCalibrationRelTimeCam"));
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| 169 | if (!fCam)
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| 170 | {
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| 171 | *fLog << err << "Cannot find MCalibrationRelTimeCam ... abort." << endl;
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| 172 | *fLog << err << "Maybe you forget to call an MFillH for the MHCalibrationRelTimeCam before..." << endl;
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| 173 | return kFALSE;
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| 174 | }
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| 175 | }
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| 176 |
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| 177 | UInt_t npixels = fGeom->GetNumPixels();
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| 178 |
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| 179 | MCalibrationRelTimeCam *relcam = fIntensCam
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| 180 | ? (MCalibrationRelTimeCam*)fIntensCam->GetCam() : fCam;
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| 181 |
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| 182 | for (UInt_t i=0; i<npixels; i++)
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| 183 | {
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| 184 |
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| 185 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*relcam)[i];
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| 186 |
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| 187 | if ((*fBadPixels)[i].IsBad())
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| 188 | {
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| 189 | pix.SetExcluded();
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| 190 | continue;
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| 191 | }
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| 192 |
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| 193 | if (IsDebug())
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| 194 | pix.SetDebug();
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| 195 | }
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| 196 |
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| 197 | return kTRUE;
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| 198 | }
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| 199 |
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| 200 | // -----------------------------------------------------------------------
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| 201 | //
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| 202 | // Return if number of executions is null.
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| 203 | //
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| 204 | Int_t MCalibrationRelTimeCalc::PostProcess()
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| 205 | {
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| 206 |
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| 207 | if (GetNumExecutions()==0)
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| 208 | return kTRUE;
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| 209 |
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| 210 | return Finalize();
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| 211 | }
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| 212 |
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| 213 | // -----------------------------------------------------------------------
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| 214 | //
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| 215 | // First loop over pixels, average areas and sectors, call:
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| 216 | // - FinalizeRelTimes()
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| 217 | // for every entry. Count number of valid pixels in loop and return kFALSE
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| 218 | // if there are none (the "Michele check").
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| 219 | //
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| 220 | // Call FinalizeBadPixels()
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| 221 | //
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| 222 | // Call MParContainer::SetReadyToSave() for fCam
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| 223 | //
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| 224 | // Print out some statistics
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| 225 | //
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| 226 | Int_t MCalibrationRelTimeCalc::Finalize()
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| 227 | {
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| 228 |
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| 229 | //
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| 230 | // First loop over pixels, call FinalizePedestals and FinalizeRelTimes
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| 231 | //
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| 232 | FinalizeRelTimes();
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| 233 |
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| 234 | //
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| 235 | // Finalize Bad Pixels
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| 236 | //
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| 237 | FinalizeBadPixels();
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| 238 |
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| 239 | //
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| 240 | // Finalize calibration statistics
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| 241 | //
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| 242 | FinalizeUnsuitablePixels();
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| 243 |
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| 244 | if (fIntensCam)
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| 245 | fIntensCam->SetReadyToSave();
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| 246 | else
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| 247 | fCam ->SetReadyToSave();
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| 248 |
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| 249 | fBadPixels->SetReadyToSave();
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| 250 |
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| 251 | *fLog << inf << endl;
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| 252 | *fLog << GetDescriptor() << ": Errors statistics:" << endl;
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| 253 |
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| 254 | PrintUncalibrated(MBadPixelsPix::kDeviatingTimeResolution,
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| 255 | Form("%s%2.1f%s","Time resol. less than ", fRelTimeResolutionLimit, " FADC sl. from Mean:"));
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| 256 | PrintUncalibrated(MBadPixelsPix::kRelTimeOscillating,
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| 257 | "Pixels with changing Rel. Times over time:");
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| 258 | PrintUncalibrated(MBadPixelsPix::kRelTimeNotFitted,
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| 259 | "Pixels with unsuccesful Gauss fit to the times:");
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| 260 |
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| 261 | return kTRUE;
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| 262 | }
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| 263 |
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| 264 |
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| 265 | // ----------------------------------------------------------------------------------------------------
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| 266 | //
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| 267 | //
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| 268 | // First loop: Calculate a mean and mean RMS of time resolution per area index
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| 269 | // Include only pixels which are not MBadPixelsPix::kUnsuitableRun or
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| 270 | // MBadPixelsPix::kUnreliableRun (see FinalizeBadPixels())
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| 271 | //
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| 272 | // Second loop: Exclude those deviating by more than fRelTimeResolutionLimit FADC slices
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| 273 | // from the mean (obtained in first loop). Set
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| 274 | // MBadPixelsPix::kDeviatingTimeResolution if excluded.
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| 275 | //
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| 276 | void MCalibrationRelTimeCalc::FinalizeRelTimes()
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| 277 | {
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| 278 |
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| 279 | MCalibrationRelTimeCam *relcam = fIntensCam
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| 280 | ? (MCalibrationRelTimeCam*)fIntensCam->GetCam() : fCam;
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| 281 |
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| 282 | const UInt_t npixels = fGeom->GetNumPixels();
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| 283 | const UInt_t nareas = fGeom->GetNumAreas();
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| 284 |
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| 285 | TArrayF lowlim (nareas);
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| 286 | TArrayF upplim (nareas);
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| 287 | TArrayF areasum (nareas);
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| 288 | // Float_t areasum2 [nareas];
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| 289 | TArrayI numareavalid (nareas);
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| 290 | TArrayI useunreliable(nareas);
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| 291 |
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| 292 | //
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| 293 | // Apero loop: Count number of unreliable pixels:
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| 294 | //
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| 295 | for (UInt_t i=0; i<npixels; i++)
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| 296 | {
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| 297 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 298 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 299 |
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| 300 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 301 | continue;
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| 302 |
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| 303 | if (bad.IsUnsuitable(MBadPixelsPix::kUnreliableRun))
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| 304 | continue;
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| 305 |
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| 306 | numareavalid[aidx] ++;
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| 307 | }
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| 308 |
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| 309 | for (UInt_t aidx=0; aidx<nareas; aidx++)
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| 310 | if (numareavalid[aidx] < 100)
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| 311 | useunreliable[aidx] = 1;
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| 312 |
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| 313 | numareavalid.Reset();
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| 314 | //
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| 315 | // First loop: Get mean time resolution the RMS
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| 316 | // The loop is only to recognize later pixels with very deviating numbers
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| 317 | //
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| 318 | for (UInt_t i=0; i<npixels; i++)
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| 319 | {
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| 320 |
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| 321 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*relcam)[i];
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| 322 |
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| 323 | if (pix.IsExcluded())
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| 324 | continue;
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| 325 |
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| 326 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 327 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 328 | continue;
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| 329 |
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| 330 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 331 |
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| 332 | if (!useunreliable[aidx])
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| 333 | if (bad.IsUnsuitable(MBadPixelsPix::kUnreliableRun))
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| 334 | continue;
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| 335 |
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| 336 | const Float_t res = pix.GetTimePrecision();
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| 337 |
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| 338 | areasum [aidx] += res;
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| 339 | // areasum2 [aidx] += res*res;
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| 340 | numareavalid[aidx] ++;
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| 341 | }
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| 342 |
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| 343 |
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| 344 | for (UInt_t aidx=0; aidx<nareas; aidx++)
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| 345 | {
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| 346 | if (numareavalid[aidx] < 20)
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| 347 | {
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| 348 | *fLog << warn << "Area " << setw(4) << aidx << ": Less than 20 pixels with valid time resolution found." << endl;
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| 349 | continue;
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| 350 | }
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| 351 |
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| 352 | // Calculate the rms out of sum2:
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| 353 | /*
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| 354 | areasum2[aidx] = (areasum2[aidx] - areasum[aidx]*areasum[aidx]/numareavalid[aidx]);
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| 355 | areasum2[aidx] /= (numareavalid[aidx]-1.);
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| 356 | */
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| 357 | areasum [aidx] /= numareavalid[aidx];
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| 358 | lowlim [aidx] = 0;
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| 359 | upplim [aidx] = areasum [aidx] + fRelTimeResolutionLimit;
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| 360 |
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| 361 | }
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| 362 | *fLog << endl;
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| 363 |
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| 364 |
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| 365 | for (UInt_t i=0; i<npixels; i++)
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| 366 | {
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| 367 |
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| 368 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*relcam)[i];
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| 369 |
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| 370 | if (pix.IsExcluded())
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| 371 | continue;
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| 372 |
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| 373 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 374 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 375 | continue;
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| 376 |
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| 377 | const Float_t res = pix.GetTimePrecision();
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| 378 | const Int_t aidx = (*fGeom)[i].GetAidx();
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| 379 |
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| 380 | if ( res < lowlim[aidx] || res > upplim[aidx] )
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| 381 | {
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| 382 | *fLog << warn << "Pixel " << setw(4) << i << ": Deviating time resolution: "
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| 383 | << Form("%4.2f",res) << " out of range ["
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| 384 | << Form("%4.2f,%4.2f",lowlim[aidx],upplim[aidx]) << "]" << endl;
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| 385 | bad.SetUncalibrated( MBadPixelsPix::kDeviatingTimeResolution);
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| 386 | pix.SetExcluded();
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| 387 | }
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| 388 | }
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| 389 | }
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| 390 |
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| 391 |
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| 392 | // -----------------------------------------------------------------------------------
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| 393 | //
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| 394 | // Sets pixel to MBadPixelsPix::kUnsuitableRun, if one of the following flags is set:
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| 395 | // - MBadPixelsPix::kRelTimeIsPedestal
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| 396 | // - MBadPixelsPix::kRelTimeErrNotValid
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| 397 | // - MBadPixelsPix::kRelTimeRelErrNotValid
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| 398 | //
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| 399 | // - Call MCalibrationPix::SetExcluded() for the bad pixels
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| 400 | //
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| 401 | void MCalibrationRelTimeCalc::FinalizeBadPixels()
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| 402 | {
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| 403 |
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| 404 | MCalibrationRelTimeCam *relcam = fIntensCam
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| 405 | ? (MCalibrationRelTimeCam*)fIntensCam->GetCam() : fCam;
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| 406 |
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| 407 | for (Int_t i=0; i<fBadPixels->GetSize(); i++)
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| 408 | {
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| 409 |
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| 410 | MCalibrationRelTimePix &pix = (MCalibrationRelTimePix&)(*relcam)[i];
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| 411 |
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| 412 | MBadPixelsPix &bad = (*fBadPixels)[i];
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| 413 |
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| 414 | if (IsCheckDeviatingBehavior())
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| 415 | if (bad.IsUncalibrated(MBadPixelsPix::kDeviatingTimeResolution))
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| 416 | bad.SetUnsuitable(MBadPixelsPix::kUnreliableRun);
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| 417 |
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| 418 | if (IsCheckFitResults())
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| 419 | if (bad.IsUncalibrated(MBadPixelsPix::kRelTimeNotFitted))
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| 420 | bad.SetUnsuitable(MBadPixelsPix::kUnreliableRun);
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| 421 |
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| 422 | if (IsCheckOscillations())
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| 423 | if (bad.IsUncalibrated(MBadPixelsPix::kRelTimeOscillating))
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| 424 | bad.SetUnsuitable(MBadPixelsPix::kUnreliableRun);
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| 425 |
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| 426 | if (bad.IsUnsuitable(MBadPixelsPix::kUnsuitableRun))
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| 427 | pix.SetExcluded();
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| 428 | }
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| 429 |
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| 430 | }
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| 431 |
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| 432 |
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| 433 | // -----------------------------------------------------------------------------------------------
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| 434 | //
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| 435 | // - Print out statistics about BadPixels of type UnsuitableType_t
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| 436 | // - store numbers of bad pixels of each type in fIntensCam or fCam
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| 437 | //
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| 438 | void MCalibrationRelTimeCalc::FinalizeUnsuitablePixels()
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| 439 | {
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| 440 | *fLog << inf << endl;
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| 441 | *fLog << GetDescriptor() << ": Rel. Times Calibration status:" << endl;
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| 442 | *fLog << dec;
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| 443 |
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| 444 | MCalibrationRelTimeCam *relcam = fIntensCam ? (MCalibrationRelTimeCam*)fIntensCam->GetCam() : fCam;
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| 445 |
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| 446 | const Int_t nareas = fGeom->GetNumAreas();
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| 447 |
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| 448 | TArrayI unsuit(nareas);
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| 449 | TArrayI unrel(nareas);
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| 450 |
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| 451 | for (int aidx=0; aidx<nareas; aidx++)
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| 452 | {
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| 453 | unsuit[aidx] += fBadPixels->GetNumUnsuitable(MBadPixelsPix::kUnsuitableRun, fGeom, aidx);
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| 454 | unrel[aidx] += fBadPixels->GetNumUnsuitable(MBadPixelsPix::kUnreliableRun, fGeom, aidx);
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| 455 | relcam->SetNumUnsuitable(unsuit[aidx], aidx);
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| 456 | relcam->SetNumUnreliable(unrel[aidx], aidx);
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| 457 | }
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| 458 |
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| 459 | if (fGeom->InheritsFrom("MGeomCamMagic"))
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| 460 | {
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| 461 | PrintUncalibrated("Uncalibrated Pixels:", unsuit[0], unsuit[1]);
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| 462 | PrintUncalibrated("Unreliable Pixels:", unrel[0], unrel[1]);
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| 463 | }
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| 464 | }
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| 465 |
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| 466 | // -----------------------------------------------------------------------------------------------
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| 467 | //
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| 468 | // Print out statistics about BadPixels of type UncalibratedType_t
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| 469 | //
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| 470 | void MCalibrationRelTimeCalc::PrintUncalibrated(MBadPixelsPix::UncalibratedType_t typ, const char *text) const
|
|---|
| 471 | {
|
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| 472 | UInt_t countinner = 0;
|
|---|
| 473 | UInt_t countouter = 0;
|
|---|
| 474 | for (Int_t i=0; i<fBadPixels->GetSize(); i++)
|
|---|
| 475 | {
|
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| 476 | if ((*fBadPixels)[i].IsUncalibrated(typ))
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|---|
| 477 | {
|
|---|
| 478 | if (fGeom->GetPixRatio(i) == 1.)
|
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| 479 | countinner++;
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| 480 | else
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| 481 | countouter++;
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|---|
| 482 | }
|
|---|
| 483 | }
|
|---|
| 484 |
|
|---|
| 485 | PrintUncalibrated(text, countinner, countouter);
|
|---|
| 486 | }
|
|---|
| 487 |
|
|---|
| 488 | void MCalibrationRelTimeCalc::PrintUncalibrated(const char *text, Int_t in, Int_t out) const
|
|---|
| 489 | {
|
|---|
| 490 | *fLog << " " << setfill(' ') << setw(56) << setiosflags(ios::left) << text;
|
|---|
| 491 | *fLog << " Inner: " << Form("%3i", in);
|
|---|
| 492 | *fLog << " Outer: " << Form("%3i", out);
|
|---|
| 493 | *fLog << resetiosflags(ios::left) << endl;
|
|---|
| 494 |
|
|---|
| 495 | }
|
|---|
| 496 |
|
|---|
| 497 | // --------------------------------------------------------------------------
|
|---|
| 498 | //
|
|---|
| 499 | // MCalibrationRelTimeCam.CheckFitResults: Yes
|
|---|
| 500 | // MCalibrationRelTimeCam.CheckDeviatingBehavior: Yes
|
|---|
| 501 | // MCalibrationRelTimeCam.CheckHistOverflow: Yes
|
|---|
| 502 | // MCalibrationRelTimeCam.CheckOscillations: Yes
|
|---|
| 503 | //
|
|---|
| 504 | Int_t MCalibrationRelTimeCalc::ReadEnv(const TEnv &env, TString prefix, Bool_t print)
|
|---|
| 505 | {
|
|---|
| 506 | Bool_t rc = kFALSE;
|
|---|
| 507 |
|
|---|
| 508 | if (IsEnvDefined(env, prefix, "CheckFitResults", print))
|
|---|
| 509 | {
|
|---|
| 510 | SetCheckFitResults(GetEnvValue(env, prefix, "CheckFitResults", IsCheckFitResults()));
|
|---|
| 511 | rc = kTRUE;
|
|---|
| 512 | }
|
|---|
| 513 | if (IsEnvDefined(env, prefix, "CheckDeviatingBehavior", print))
|
|---|
| 514 | {
|
|---|
| 515 | SetCheckDeviatingBehavior(GetEnvValue(env, prefix, "CheckDeviatingBehavior", IsCheckDeviatingBehavior()));
|
|---|
| 516 | rc = kTRUE;
|
|---|
| 517 | }
|
|---|
| 518 | if (IsEnvDefined(env, prefix, "CheckHistOverflow", print))
|
|---|
| 519 | {
|
|---|
| 520 | SetCheckHistOverflow(GetEnvValue(env, prefix, "CheckHistOverflow", IsCheckHistOverflow()));
|
|---|
| 521 | rc = kTRUE;
|
|---|
| 522 | }
|
|---|
| 523 |
|
|---|
| 524 | if (IsEnvDefined(env, prefix, "CheckOscillations", print))
|
|---|
| 525 | {
|
|---|
| 526 | SetCheckOscillations(GetEnvValue(env, prefix, "CheckOscillations", IsCheckOscillations()));
|
|---|
| 527 | rc = kTRUE;
|
|---|
| 528 | }
|
|---|
| 529 | if (IsEnvDefined(env, prefix, "RelTimeResolutionLimit", print))
|
|---|
| 530 | {
|
|---|
| 531 | SetRelTimeResolutionLimit(GetEnvValue(env, prefix, "RelTimeResolutionLimit", fRelTimeResolutionLimit));
|
|---|
| 532 | rc = kTRUE;
|
|---|
| 533 | }
|
|---|
| 534 |
|
|---|
| 535 | return rc;
|
|---|
| 536 | }
|
|---|
