/* ======================================================================== *\
!
! *
! * This file is part of MARS, the MAGIC Analysis and Reconstruction
! * Software. It is distributed to you in the hope that it can be a useful
! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
! * It is distributed WITHOUT ANY WARRANTY.
! *
! * Permission to use, copy, modify and distribute this software and its
! * documentation for any purpose is hereby granted without fee,
! * provided that the above copyright notice appear in all copies and
! * that both that copyright notice and this permission notice appear
! * in supporting documentation. It is provided "as is" without express
! * or implied warranty.
! *
!
!
!   Author(s): Markus Gaug   02/2004 <mailto:markus@ifae.es>
!              
!   Copyright: MAGIC Software Development, 2000-2004
!
!
\* ======================================================================== */
/////////////////////////////////////////////////////////////////////////////
//                                                                        
// MHCalibrationTestCam                                                
//                                                                        
// Fills the calibrated signal from an MCerPhotEvt into 
// MHCalibrationTestPix for every:
//
// - Pixel, stored in the TObjArray's MHCalibrationCam::fHiGainArray  
//   or MHCalibrationCam::fHiGainArray, respectively.
//
// - Average pixel per AREA index (e.g. inner and outer for the MAGIC camera), 
//   stored in the TObjArray's MHCalibrationCam::fAverageHiGainAreas and 
//   MHCalibrationCam::fAverageHiGainAreas
//
// - Average pixel per camera SECTOR (e.g. sectors 1-6 for the MAGIC camera), 
//   stored in the TObjArray's MHCalibrationCam::fAverageHiGainSectors 
//   and MHCalibrationCam::fAverageHiGainSectors 
//
// The signals are filled into a histogram and an array, in order to perform 
// a Fourier analysis (see MHGausEvents). The signals are moreover averaged on an 
// event-by-event basis and written into the corresponding average pixels.
//
// The histograms are fitted to a Gaussian, mean and sigma with its errors 
// and the fit probability are extracted. If none of these values are NaN's and 
// if the probability is bigger than MHGausEvents::fProbLimit (default: 0.5%), 
// the fit is declared valid.
// Otherwise, the fit is repeated within ranges of the previous mean 
// +- MHGausEvents::fPickupLimit (default: 5) sigma (see MHGausEvents::RepeatFit())
// In case this does not make the fit valid, the histogram means and RMS's are 
// taken directly (see MHGausEvents::BypassFit()) and the following flags are set:
// - MBadPixelsPix::SetUncalibrated( MBadPixelsPix::kHiGainNotFitted ) and
// - MBadPixelsPix::SetUnsuitable(   MBadPixelsPix::kUnreliableRun    ) 
// 
// Outliers of more than MHGausEvents::fPickupLimit (default: 5) sigmas 
// from the mean are counted as Pickup events (stored in MHGausEvents::fPickup) 
//
// The class also fills arrays with the signal vs. event number, creates a fourier 
// spectrum (see MHGausEvents::CreateFourierSpectrum()) and investigates if the 
// projected fourier components follow an exponential distribution. 
// In case that the probability of the exponential fit is less than 
// MHGausEvents::fProbLimit (default: 0.5%), the following flags are set:
// - MBadPixelsPix::SetUncalibrated( MBadPixelsPix::kHiGainOscillating ) and
// - MBadPixelsPix::SetUnsuitable(   MBadPixelsPix::kUnreliableRun      )
// 
// This same procedure is performed for the average pixels.
//
// The following results are written into an MCalibrationCam:
//
// - MCalibrationPix::SetMean()
// - MCalibrationPix::SetMeanErr()
// - MCalibrationPix::SetSigma()
// - MCalibrationPix::SetSigmaErr()
// - MCalibrationPix::SetProb()
// - MCalibrationPix::SetNumPickup()
//
// For all averaged areas, the fitted sigma is multiplied with the square root of 
// the number involved pixels in order to be able to compare it to the average of 
// sigmas in the camera.
//                                                                         
/////////////////////////////////////////////////////////////////////////////
#include "MHCalibrationTestCam.h"
#include "MHCalibrationTestPix.h"

#include "MLog.h"
#include "MLogManip.h"

#include "MParList.h"

#include "MCalibrationCam.h"
#include "MCalibrationPix.h"

#include "MCerPhotEvt.h"
#include "MCerPhotPix.h"

#include "MGeomCam.h"
#include "MGeomPix.h"

#include "MBadPixelsCam.h"
#include "MBadPixelsPix.h"

ClassImp(MHCalibrationTestCam);

using namespace std;
// --------------------------------------------------------------------------
//
// Default Constructor. 
//
MHCalibrationTestCam::MHCalibrationTestCam(const char *name, const char *title) 
{

  fName  = name  ? name  : "MHCalibrationTestCam";
  fTitle = title ? title : "Histogram class for testing the calibration";
  
  SetAverageNbins(5000);
}

// --------------------------------------------------------------------------
//
// Gets or creates the pointers to:
// - MCalibrationTestCam
//
// Searches pointer to:
// - MCerPhotEvt
//
// Initializes, if empty to MGeomCam::GetNumAreas() for:
// - MHCalibrationCam::fAverageHiGainAreas, MHCalibrationCam::fAverageLoGainAreas
//
// Initializes, if empty to MGeomCam::GetNumSectors() for:
// - MHCalibrationCam::fAverageHiGainSectors, MHCalibrationCam::fAverageLoGainSectors
// 
// Calls MHCalibrationCam::InitHists() for every entry in:
// - MHCalibrationCam::fHiGainArray
// - MHCalibrationCam::fAverageHiGainAreas
// - MHCalibrationCam::fAverageHiGainSectors
//
// Sets Titles and Names for the Histograms 
// - MHCalibrationCam::fAverageHiGainAreas
// - MHCalibrationCam::fAverageHiGainSectors
// 
// Sets number of bins to MHCalibrationCam::fAverageNbins for:
// - MHCalibrationCam::fAverageHiGainAreas
// - MHCalibrationCam::fAverageHiGainSectors
//
Bool_t MHCalibrationTestCam::ReInitHists(MParList *pList)
{

  MCerPhotEvt *signal = (MCerPhotEvt*)pList->FindObject("MCerPhotEvt");
  if (!signal)
  {
      *fLog << err << "MCerPhotEvt not found... abort." << endl;
      return kFALSE;
  }

  const Int_t npixels  = fGeom->GetNumPixels();
  const Int_t nsectors = fGeom->GetNumSectors();
  const Int_t nareas   = fGeom->GetNumAreas();

  if (fHiGainArray->GetEntries()==0)
  {
      fHiGainArray->Expand(npixels);
      for (Int_t i=0; i<npixels; i++)
      {
	  (*fHiGainArray)[i] = new MHCalibrationTestPix("Calibrated Events",
                                                "Test Calibration Pixel");
          InitHists((*this)[i],(*fBadPixels)[i],i);
      }
  }

  if (fLoGainArray->GetEntries()==0)
  {
      fLoGainArray->Expand(npixels);
      for (Int_t i=0; i<npixels; i++)
      {
	  (*fLoGainArray)[i] = new MHCalibrationTestPix("Calibrated Events",
                                                "Test Calibration Pixel");
          InitHists((*this)(i),(*fBadPixels)[i],i);
      }
  }


  if (fAverageHiGainAreas->GetEntries()==0)
  {
    fAverageHiGainAreas->Expand(nareas);
    
    for (Int_t j=0; j<nareas; j++)
      {
        (*fAverageHiGainAreas)[j] = 
          new MHCalibrationTestPix("MHCalibrationTestAverageArea",
                           "Average Test Calibrations Area Idx ");

        GetAverageHiGainArea(j).GetHGausHist()->SetTitle("Test Calibrations Area Idx ");
        GetAverageHiGainArea(j).SetNbins(fAverageNbins);
        GetAverageHiGainArea(j).InitBins();
        GetAverageHiGainArea(j).ChangeHistId(j);
        GetAverageHiGainArea(j).SetEventFrequency(fPulserFrequency);

        TH1F *h =  GetAverageHiGainArea(j).GetHGausHist();
        h->SetTitle( Form("%s%s", h->GetTitle()," Runs: "));
      }
  }

  if (fAverageLoGainAreas->GetEntries()==0)
  {
    fAverageLoGainAreas->Expand(nareas);
    
    for (Int_t j=0; j<nareas; j++)
      {
        (*fAverageLoGainAreas)[j] = 
          new MHCalibrationTestPix("MHCalibrationTestAverageArea",
                           "Average Test Calibrations Area Idx ");

        GetAverageLoGainArea(j).GetHGausHist()->SetTitle("Test Calibrations Area Idx ");
        GetAverageLoGainArea(j).SetNbins(fAverageNbins);
        GetAverageLoGainArea(j).InitBins();
        GetAverageLoGainArea(j).ChangeHistId(j);
        GetAverageLoGainArea(j).SetEventFrequency(fPulserFrequency);

      }
  }


  if (fAverageHiGainSectors->GetEntries()==0)
  {
      fAverageHiGainSectors->Expand(nsectors);

      for (Int_t j=0; j<nsectors; j++)
      {
	  (*fAverageHiGainSectors)[j] = 
            new MHCalibrationTestPix("MHCalibrationTestAverageSector",
                             "Average Test Calibrations Sector ");

          GetAverageHiGainSector(j).GetHGausHist()->SetTitle("Test Calibrations Sector ");
          GetAverageHiGainSector(j).SetNbins(fAverageNbins);
          GetAverageHiGainSector(j).InitBins();
          GetAverageHiGainSector(j).ChangeHistId(j);
          GetAverageHiGainSector(j).SetEventFrequency(fPulserFrequency);

          TH1F *h =  GetAverageHiGainSector(j).GetHGausHist();
          h->SetTitle( Form("%s%s", h->GetTitle()," Runs: "));

      }
  }


  if (fAverageLoGainSectors->GetEntries()==0)
  {
      fAverageLoGainSectors->Expand(nsectors);

      for (Int_t j=0; j<nsectors; j++)
      {
	  (*fAverageLoGainSectors)[j] = 
            new MHCalibrationTestPix("MHCalibrationTestAverageSector",
                             "Average Test Calibrations Sector ");

          GetAverageLoGainSector(j).GetHGausHist()->SetTitle("Test Calibrations Sector ");
          GetAverageLoGainSector(j).SetNbins(fAverageNbins);
          GetAverageLoGainSector(j).InitBins();
          GetAverageLoGainSector(j).ChangeHistId(j);
          GetAverageLoGainSector(j).SetEventFrequency(fPulserFrequency);
      }
  }


  fMeanMeanPhotPerArea.Set(nareas);   
  fRmsMeanPhotPerArea .Set(nareas); 
  fMeanSigmaPhotPerArea.Set(nareas);  
  fRmsSigmaPhotPerArea.Set(nareas);
 
  return kTRUE;
}


// -------------------------------------------------------------------------------
//
// Retrieves pointer to MCerPhotEvt:
//
// Retrieves from MGeomCam:
// - number of pixels
// - number of pixel areas
// - number of sectors
//
// Fills HiGain or LoGain histograms (MHGausEvents::FillHistAndArray()), respectively
// depending on MCerPhotPix::IsLoGainUsed(), with:
// - MCerPhotPix::GetArrivalTime(pixid) - MCerPhotPix::GetArrivalTime(1);
//   (i.e. the time difference between pixel i and pixel 1 (hardware number: 2) )
//
Bool_t MHCalibrationTestCam::FillHists(const MParContainer *par, const Stat_t w)
{

  MCerPhotEvt *calibration = (MCerPhotEvt*)par;
  if (!calibration)
    {
      gLog << err << "No argument in MHCalibrationRelTimeCam::Fill... abort." << endl;
      return kFALSE;
    }

  const Int_t npixels  = fGeom->GetNumPixels();
  const Int_t nareas   = fGeom->GetNumAreas();
  const Int_t nsectors = fGeom->GetNumSectors();

  Float_t sumareahi  [nareas]; 
  Float_t sumsectorhi[nsectors];
  Int_t   numareahi  [nareas]; 
  Int_t   numsectorhi[nsectors];

  memset(sumareahi,   0, nareas * sizeof(Float_t));
  memset(sumsectorhi, 0, nsectors*sizeof(Float_t));
  memset(numareahi,   0, nareas * sizeof(Int_t));
  memset(numsectorhi, 0, nsectors*sizeof(Int_t));
  
  for (Int_t i=0; i<npixels; i++)
    {

      MHGausEvents &histhi = (*this)[i];

      if (histhi.IsExcluded())
	continue;

      const MCerPhotPix *pix = calibration->GetPixById(i);
      if (!pix)
        continue;

      const Float_t   signal = pix->GetNumPhotons();

      const Int_t aidx   = (*fGeom)[i].GetAidx();
      const Int_t sector = (*fGeom)[i].GetSector();

      histhi.FillHistAndArray(signal) ;
      sumareahi  [aidx]   += signal;
      numareahi  [aidx]   ++;
      sumsectorhi[sector] += signal;
      numsectorhi[sector] ++;
    }
  
  for (Int_t j=0; j<nareas; j++)
    {
      MHGausEvents &histhi = GetAverageHiGainArea(j);
      histhi.FillHistAndArray(numareahi[j] == 0 ? 0. : sumareahi[j]/numareahi[j]);

    }
  
  for (Int_t j=0; j<nsectors; j++)
    {
      MHGausEvents &histhi = GetAverageHiGainSector(j);
      histhi.FillHistAndArray(numsectorhi[j] == 0 ? 0. : sumsectorhi[j]/numsectorhi[j]);

    }

  return kTRUE;
}

// --------------------------------------------------------------------------
//
// Calls:
// - MHCalibrationCam::FitHiGainArrays() with flags:
//   MBadPixelsPix::kTestNotFitted and MBadPixelsPix::kTestOscillating
// - MHCalibrationCam::FitLoGainArrays() with flags:
//   MBadPixelsPix::kTestNotFitted and MBadPixelsPix::kTestOscillating
// 
Bool_t MHCalibrationTestCam::FinalizeHists()
{

  TArrayI numaidx;
  numaidx.Set(fGeom->GetNumAreas());

  for (Int_t i=0; i<fHiGainArray->GetSize(); i++)
    {
      
      MHGausEvents &hist = (*this)[i];
      
      if (hist.IsExcluded())
        continue;
      
      if (hist.IsEmpty())
        continue;
      
      if (!hist.FitGaus())
        if (!hist.RepeatFit())
          {
            hist.BypassFit();
          }
      
      hist.CreateFourierSpectrum();
      
      const Float_t area = (*fGeom)[i].GetA();
      const Int_t   aidx = (*fGeom)[i].GetAidx();

      fMeanMeanPhotPerArea[aidx]  += hist.GetMean() / area;
      fRmsMeanPhotPerArea [aidx]  += hist.GetMean() / area * hist.GetMean()  / area;
      fMeanSigmaPhotPerArea[aidx] += hist.GetSigma()/ area;
      fRmsSigmaPhotPerArea [aidx] += hist.GetSigma()/ area * hist.GetSigma() / area;
      numaidx[aidx]++;
    }


  for (Int_t j=0; j<fAverageHiGainAreas->GetSize(); j++)
    {
      
      MHGausEvents     &hist = GetAverageHiGainArea(j);      
      if (hist.IsEmpty())
        continue;
      
      if (!hist.FitGaus())
        if (!hist.RepeatFit())
          {
            hist.BypassFit();
          }
      
      hist.CreateFourierSpectrum();
      
      fRmsMeanPhotPerArea [j]  -= fMeanMeanPhotPerArea [j]*fMeanMeanPhotPerArea [j]/numaidx[j];
      fRmsSigmaPhotPerArea[j]  -= fMeanSigmaPhotPerArea[j]*fMeanSigmaPhotPerArea[j]/numaidx[j];

      fMeanMeanPhotPerArea [j]  /=  numaidx[j];
      fMeanSigmaPhotPerArea[j]  /=  numaidx[j];
      fRmsMeanPhotPerArea  [j]  /=  numaidx[j]-1.;
      fRmsSigmaPhotPerArea [j]  /=  numaidx[j]-1.; 

      if (fRmsMeanPhotPerArea  [j] > 0.)
        fRmsMeanPhotPerArea  [j]  =  TMath::Sqrt(fRmsMeanPhotPerArea  [j]);
      if (fRmsSigmaPhotPerArea [j] > 0.)
        fRmsSigmaPhotPerArea [j]  =  TMath::Sqrt(fRmsSigmaPhotPerArea [j]);
  }

  for (Int_t j=0; j<fAverageHiGainSectors->GetSize(); j++)
    {
      
      MHGausEvents     &hist = GetAverageHiGainSector(j);      
      if (hist.IsEmpty())
        continue;
      
      if (!hist.FitGaus())
        if (!hist.RepeatFit())
          {
            hist.BypassFit();
          }
      hist.CreateFourierSpectrum();
      

    }

  return kTRUE;
}

// --------------------------------------------------------------------------
//
// Sets all pixels to MBadPixelsPix::kUnreliableRun, if following flags are set:
// - MBadPixelsPix::kTestNotFitted
// - MBadPixelsPix::kTestOscillating
//
void MHCalibrationTestCam::FinalizeBadPixels()
{

}

// --------------------------------------------------------------------------
//
// The types are as follows:
// 
// Fitted values:
// ============== 
//
// 0: Fitted Mean Test Calibration (MHGausEvents::GetMean())
// 1: Error Mean Test Calibration  (MHGausEvents::GetMeanErr())
// 2: Sigma fitted Test Calibration (MHGausEvents::GetSigma())
// 3: Error Sigma Test Calibration (MHGausEvents::GetSigmaErr())
//
// Useful variables derived from the fit results:
// =============================================
//
// 4: Returned probability of Gauss fit              (calls: MHGausEvents::GetProb())
//
// Localized defects:
// ==================
//
// 5: Gaus fit not OK                               (calls: MHGausEvents::IsGausFitOK())
// 6: Fourier spectrum not OK                       (calls: MHGausEvents::IsFourierSpectrumOK())
//
// Converted values:
// =================
//
// 7:  Fitted Mean Test Calibration   (MHGausEvents::GetMean())     by MGeomPix::GetA()
// 8:  Fitted Mean Error Calibration  (MHGausEvents::GetMeanErr())  by MGeomPix::GetA()
// 9:  Fitted Sigma Test Calibration  (MHGausEvents::GetSigma())    by MGeomPix::GetA()
// 10: Fitted Sigma Error Calibration (MHGausEvents::GetSigmaErr()) by MGeomPix::GetA()
//
Bool_t MHCalibrationTestCam::GetPixelContent(Double_t &val, Int_t idx, const MGeomCam &cam, Int_t type) const
{

  if (fHiGainArray->GetSize() <= idx)
    return kFALSE;

  const MHGausEvents &pix = (*this)[idx];

  if (pix.IsExcluded())
    return kFALSE;

  switch (type)
    {
    case 0:
      val = pix.GetMean();
      break;
    case 1:
      val = pix.GetMeanErr();
      break;
    case 2:
      val = pix.GetSigma();
      break;
    case 3:
      val = pix.GetSigmaErr();
      break;
    case 4:
      val = pix.GetProb();
      break;
    case 5:
      if (!pix.IsGausFitOK())
        val = 1.;
      break;
    case 6:
      if (!pix.IsFourierSpectrumOK())
        val = 1.;
      break;
    case 7:
      val = pix.GetMean()/cam[idx].GetA();
      break;
    case 8:
      val = pix.GetMeanErr()/cam[idx].GetA();
      break;
    case 9:
      val = pix.GetSigma()/cam[idx].GetA();
      break;
    case 10:
      val = pix.GetSigmaErr()/cam[idx].GetA();
      break;
    default:
      return kFALSE;
    }
  return kTRUE;
}

// --------------------------------------------------------------------------
//
// Calls MHGausEvents::DrawClone() for pixel idx
//
void MHCalibrationTestCam::DrawPixelContent(Int_t idx) const
{
 (*this)[idx].DrawClone();
}


//------------------------------------------------------------
//
// For all averaged areas, the fitted sigma is multiplied with the square root of 
// the number involved pixels
//
void MHCalibrationTestCam::CalcAverageSigma()
{
  
  for (UInt_t j=0; j<fGeom->GetNumAreas(); j++)
    {
  
      MHGausEvents &hist    = GetAverageHiGainArea(j);

      const Float_t numsqr    = TMath::Sqrt((Float_t)fAverageAreaNum[j]);
      fAverageAreaSigma[j]    = hist.GetSigma    () * numsqr;
      fAverageAreaSigmaVar[j] = hist.GetSigmaErr () * hist.GetSigmaErr() * numsqr;

      fAverageAreaRelSigma   [j]  = fAverageAreaSigma[j]    / hist.GetMean();
      fAverageAreaRelSigmaVar[j]  = fAverageAreaSigmaVar[j] / (fAverageAreaSigma[j]*fAverageAreaSigma[j]);
      fAverageAreaRelSigmaVar[j] += hist.GetMeanErr()*hist.GetMeanErr()/hist.GetMean()/hist.GetMean();
      fAverageAreaRelSigmaVar[j] *= fAverageAreaRelSigma[j];
    }
}