1 | /* ======================================================================== *\
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2 | !
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3 | ! *
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4 | ! * This file is part of MARS, the MAGIC Analysis and Reconstruction
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5 | ! * Software. It is distributed to you in the hope that it can be a useful
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6 | ! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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7 | ! * It is distributed WITHOUT ANY WARRANTY.
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8 | ! *
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9 | ! * Permission to use, copy, modify and distribute this software and its
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10 | ! * documentation for any purpose is hereby granted without fee,
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11 | ! * provided that the above copyright notice appear in all copies and
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12 | ! * that both that copyright notice and this permission notice appear
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13 | ! * in supporting documentation. It is provided "as is" without express
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14 | ! * or implied warranty.
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15 | ! *
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16 | !
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17 | !
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18 | ! Author(s): Thomas Bretz, 6/2001 <mailto:tbretz@astro.uni-wuerzburg.de>
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19 | !
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20 | ! Copyright: MAGIC Software Development, 2000-2005
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21 | !
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22 | !
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23 | \* ======================================================================== */
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24 |
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25 | /////////////////////////////////////////////////////////////////////////////
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26 | //
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27 | // MWriteRootFile
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28 | //
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29 | // This is a writer to store several containers to a root file.
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30 | // The containers are added with AddContainer.
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31 | // To understand how it works, see base class MWriteFile
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32 | //
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33 | // Warning: Look at the Warning in MTaskList.
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34 | //
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35 | // There is a special mode of operation which opens a new file for each new
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36 | // file read by the reading task (opening the new file is initiated by
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37 | // ReInit()) For more details se the corresponding constructor.
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38 | //
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39 | // Memory based trees
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40 | // ------------------
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41 | // It is possible to store the data into memory (TTrees) instead of
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42 | // writing the data into a file. To do this either call the default
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43 | // constructor or specify 'memory' as option in the constructor.
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44 | //
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45 | // Afterwards the tree can be found using gROOT->FindObject("treename")
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46 | //
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47 | // Currently(!) the tree is not deleted at all! Please make sure to
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48 | // delete it if it is not used anymore - otherwise you could wast a LOT
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49 | // of memory. Please consider that this behaviour might change in the
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50 | // future.
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51 | //
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52 | // Such trees are usefull if you want to use more basic root-tools
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53 | // like TMultiLayerPerceptron or TEventList.
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54 | //
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55 | // If you want to process such memory based Trees using Mars make sure,
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56 | // that you don't need data from the RunHeader tree because you can
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57 | // only use MReadTree but not MReadMarsFile with such a tree.
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58 | //
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59 | /////////////////////////////////////////////////////////////////////////////
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60 | #include "MWriteRootFile.h"
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61 |
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62 | #include <fstream>
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63 |
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64 | #include <TFile.h>
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65 | #include <TTree.h>
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66 | #include <TRegexp.h>
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67 |
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68 | #include "MLog.h"
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69 | #include "MLogManip.h"
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70 |
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71 | #include "MRead.h"
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72 | #include "MParList.h"
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73 |
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74 | ClassImp(MRootFileBranch);
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75 | ClassImp(MWriteRootFile);
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76 |
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77 | using namespace std;
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78 |
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79 | const TString MWriteRootFile::gsDefName = "MWriteRootFile";
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80 | const TString MWriteRootFile::gsDefTitle = "Task which writes a root-output file";
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81 |
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82 | void MWriteRootFile::Init(const char *name, const char *title)
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83 | {
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84 | fName = name ? name : gsDefName.Data();
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85 | fTitle = title ? title : gsDefTitle.Data();
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86 |
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87 | //
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88 | // Set the Arrays the owner of its entries. This means, that the
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89 | // destructor of the arrays will delete all its entries.
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90 | //
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91 | fBranches.SetOwner();
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92 |
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93 | //
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94 | // Believing the root user guide, TTree instances are owned by the
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95 | // directory (file) in which they are. This means we don't have to
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96 | // care about their destruction.
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97 | //
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98 | //fTrees.SetOwner();
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99 |
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100 | gROOT->GetListOfCleanups()->Add(this); // To remove fDisplay
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101 | SetBit(kMustCleanup);
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102 | }
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103 |
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104 | // --------------------------------------------------------------------------
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105 | //
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106 | // Default constructor. It is there to support some root stuff.
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107 | // Don't use it.
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108 | //
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109 | MWriteRootFile::MWriteRootFile() : fOut(NULL)
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110 | {
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111 | Init();
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112 | }
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113 |
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114 | // --------------------------------------------------------------------------
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115 | //
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116 | // Use this constructor to run in a special mode.
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117 | //
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118 | // In this mode for each input file a new output file is written. This
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119 | // happens in ReInit.
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120 | //
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121 | // comp: Compression Level (see TFile, TBranch)
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122 | // rule: Rule to create output file name (see GetNewFileName())
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123 | // overwrite: Allow newly created file to overwrite old files ("RECREATE")
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124 | // ftitle: File title stored in the file (see TFile)
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125 | // name, title: Name and title of this object
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126 | //
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127 | MWriteRootFile::MWriteRootFile(const Int_t comp,
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128 | const char *rule,
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129 | const Option_t *option,
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130 | const char *ftitle,
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131 | const char *name,
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132 | const char *title) : fSplitRule(rule)
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133 | {
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134 | Init(name, title);
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135 |
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136 | //
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137 | // Open a TFile in dummy mode! This is necessary to be able to create
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138 | // the trees and branches, which are then (in ReInit) moved to
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139 | // a valid file. (Stupid workaround - but does a good job)
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140 | //
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141 | fOut = new TFile("/dev/null", option, ftitle, comp);
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142 | fOut->SetOption(option); // IMPORTANT!
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143 | }
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144 |
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145 | // --------------------------------------------------------------------------
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146 | //
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147 | // Specify the name of the root file. You can also give an option ("UPDATE"
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148 | // and "RECREATE" would make sense only) as well as the file title and
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149 | // compression factor. To a more detaild description of the options see
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150 | // TFile.
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151 | //
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152 | // To create a memory based TTree use
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153 | // fname = name of TTree
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154 | // option = "memory"
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155 | // Make sure you do not read from a tree with the same name!
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156 | //
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157 | MWriteRootFile::MWriteRootFile(const char *fname,
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158 | const Option_t *option,
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159 | const char *ftitle,
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160 | const Int_t comp,
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161 | const char *name,
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162 | const char *title) : fOut(NULL)
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163 | {
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164 | Init(name, title);
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165 |
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166 | TString opt(option);
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167 | opt.ToLower();
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168 |
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169 | //
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170 | // Check if we are writing to memory
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171 | //
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172 | if (opt.Contains("memory", TString::kIgnoreCase))
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173 | {
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174 | fSplitRule = fname;
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175 | return;
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176 | }
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177 |
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178 | //
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179 | // If no name is given we open the TFile in some kind of dummy mode...
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180 | //
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181 | if (!fname)
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182 | {
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183 | fOut = new TFile("/dev/null", "READ", ftitle, comp);
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184 | return;
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185 | }
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186 |
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187 | TString str(fname);
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188 | if (!str.EndsWith(".root", TString::kIgnoreCase))
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189 | str += ".root";
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190 |
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191 | //
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192 | // Open the rootfile
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193 | //
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194 | TObject *find = gROOT->FindObject(str);
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195 | if (find && find->InheritsFrom(TFile::Class()))
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196 | {
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197 | fOut = (TFile*)find;
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198 | fOut->SetBit(kMustCleanup);
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199 | SetBit(kIsNotOwner);
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200 |
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201 | *fLog << inf << "File '" << fname << "' already open... using." << endl;
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202 | *fLog << "Make sure that you do NOT write to trees which are" << endl;
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203 | *fLog << "scheduled already by a different MWriteRootFile..." << endl;
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204 | }
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205 | else
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206 | fOut = new TFile(str, opt, ftitle, comp);
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207 | }
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208 |
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209 | // --------------------------------------------------------------------------
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210 | //
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211 | // Prints some statistics about the file to the screen. And closes the file
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212 | // properly.
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213 | //
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214 | void MWriteRootFile::Close()
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215 | {
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216 | //
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217 | // Print some statistics to the looging out.
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218 | //
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219 | Print();
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220 |
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221 | if (fOut && !TestBit(kIsNotOwner))
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222 | {
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223 | //
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224 | // If the file is still open (no error) write the keys. This is necessary
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225 | // for appearance of the all trees and branches.
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226 | //
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227 | if (IsFileOpen())
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228 | fOut->Write();
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229 |
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230 | //
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231 | // Delete the file. This'll also close the file (if open)
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232 | //
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233 | delete fOut;
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234 |
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235 | //
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236 | // Remark:
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237 | // - Trees are automatically deleted by the the file
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238 | // (unless file.SetDirectory(0) was called)
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239 | // - Branches are automatically deleted by the tree destructor
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240 | //
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241 | *fLog << inf << "Output File closed and object deleted." << endl;
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242 | }
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243 |
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244 | fOut = 0;
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245 | }
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246 |
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247 | // --------------------------------------------------------------------------
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248 | //
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249 | // call Close()
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250 | //
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251 | MWriteRootFile::~MWriteRootFile()
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252 | {
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253 | Close();
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254 | }
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255 |
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256 | // --------------------------------------------------------------------------
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257 | //
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258 | // Prints all trees with the actually number of written entries to log-out.
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259 | //
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260 | void MWriteRootFile::Print(Option_t *) const
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261 | {
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262 | if (!fOut)
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263 | return;
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264 |
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265 | *fLog << all << underline << "File: " << GetFileName() << endl;
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266 |
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267 | if (fTrees.GetEntries()==0)
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268 | {
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269 | *fLog << " No contents." << endl;
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270 | return;
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271 | }
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272 |
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273 | TObject *obj;
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274 | TIter NextBranch(&fBranches);
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275 | while ((obj=NextBranch()))
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276 | {
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277 | MRootFileBranch *b = (MRootFileBranch*)obj;
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278 |
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279 | if (!b->GetTree() || b->GetTree()->TestBit(kIsNewTree))
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280 | continue;
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281 |
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282 | TBranch *branch = b->GetBranch();
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283 |
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284 | TString name = b->GetTree()->GetName();
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285 | name += '.';
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286 | name += branch->GetName();
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287 |
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288 | *fLog << " + " << name.Strip(TString::kTrailing, '.') << ": \t" << (ULong_t)branch->GetEntries() << " entries." << endl;
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289 | }
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290 |
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291 | TTree *t = NULL;
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292 | TIter NextTree(&fTrees);
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293 | while ((t=(TTree*)NextTree()))
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294 | if (t->TestBit(kIsNewTree))
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295 | *fLog << " + " << t->GetName() << ": \t" << (ULong_t)t->GetEntries() << " entries." << endl;
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296 |
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297 | TIter NextKey(fOut->GetListOfKeys());
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298 | while ((obj=NextKey()))
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299 | {
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300 | if (!obj->InheritsFrom(TTree::Class()))
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301 | continue;
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302 |
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303 | if (fTrees.FindObject(obj) && obj->TestBit(kIsNewTree))
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304 | continue;
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305 |
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306 | *fLog << " - " << obj->GetName() << ": \t" << (ULong_t)((TTree*)t)->GetEntries() << " entries." << endl;
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307 | }
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308 | *fLog << endl;
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309 |
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310 | }
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311 |
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312 | // --------------------------------------------------------------------------
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313 | //
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314 | // Add a new Container to list of containers which should be written to the
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315 | // file. Give the name of the container which will identify the container
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316 | // in the parameterlist. tname is the name of the tree to which the
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317 | // container should be written (Remark: one tree can hold more than one
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318 | // container). The default is the same name as the container name.
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319 | // You can slso specify a title for the tree. This is only
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320 | // used the first time this tree in 'mentioned'. As default the title
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321 | // is the name of the tree.
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322 | //
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323 | void MWriteRootFile::AddContainer(const char *cname, const char *tname, Bool_t must)
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324 | {
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325 | if (!fOut && !tname)
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326 | tname = fSplitRule;
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327 |
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328 | TIter Next(&fBranches);
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329 | TObject *o=0;
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330 | while ((o=Next()))
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331 | if (TString(o->GetName())==TString(tname) && TString(o->GetTitle())==TString(cname))
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332 | {
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333 | *fLog << warn;
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334 | *fLog << "WARNING - Container '" << cname << "' in Tree '" << tname << "' already scheduled... ignored." << endl;
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335 | return;
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336 | }
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337 |
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338 | //
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339 | // create a new entry in the list of branches to write and
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340 | // add the entry to the list.
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341 | //
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342 | MRootFileBranch *entry = new MRootFileBranch(AddSerialNumber(cname), tname, must);
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343 | fBranches.AddLast(entry);
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344 |
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345 | if (tname && tname[0])
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346 | AddToBranchList(Form("%s.%s", (const char*)AddSerialNumber(cname), tname));
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347 | }
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348 |
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349 | // --------------------------------------------------------------------------
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350 | //
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351 | // Add a new Container to list of containers which should be written to the
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352 | // file. Give the pointer to the container. tname is the name of the tree to
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353 | // which the container should be written (Remark: one tree can hold more than
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354 | // one container). The default is the same name as the container name.
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355 | // You can slso specify a title for the tree. This is only
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356 | // used the first time this tree in 'mentioned'. As default the title
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357 | // is the name of the tree.
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358 | //
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359 | void MWriteRootFile::AddContainer(MParContainer *cont, const char *tname,
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360 | Bool_t must)
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361 | {
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362 | if (!fOut && !tname)
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363 | tname = fSplitRule;
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364 |
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365 | TIter Next(&fBranches);
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366 | TObject *o=0;
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367 | while ((o=Next()))
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368 | if (TString(o->GetName())==TString(tname) &&
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369 | static_cast<MRootFileBranch*>(o)->GetContainer()==cont)
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370 | {
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371 | *fLog << warn;
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372 | *fLog << "WARNING - Container " << cont << " in Tree '" << tname << "' already scheduled... ignored." << endl;
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373 | return;
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374 | }
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375 |
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376 | //
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377 | // create a new entry in the list of branches to write and
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378 | // add the entry to the list.
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379 | //
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380 | MRootFileBranch *entry = new MRootFileBranch(cont, tname, must);
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381 | fBranches.AddLast(entry);
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382 | }
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383 |
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384 | // --------------------------------------------------------------------------
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385 | //
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386 | // Add a new Container to list of containers which should be written to the
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387 | // file. Give the pointer to the container. tname is the name of the tree to
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388 | // which the container should be written (Remark: one tree can hold more than
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389 | // one container). The default is the same name as the container name.
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390 | // You can slso specify a title for the tree. This is only
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391 | // used the first time this tree in 'mentioned'. As default the title
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392 | // is the name of the tree.
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393 | //
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394 | Bool_t MWriteRootFile::GetContainer(MParList *pList)
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395 | {
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396 | //
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397 | // loop over all branches which are 'marked' as branches to get written.
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398 | //
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399 | MRootFileBranch *entry;
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400 |
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401 | TIter Next(&fBranches);
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402 | while ((entry=(MRootFileBranch*)Next()))
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403 | {
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404 | //
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405 | // Get the pointer to the container. If the pointer is NULL it seems,
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406 | // that the user identified the container by name.
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407 | //
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408 | MParContainer *cont = entry->GetContainer();
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409 | if (!cont)
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410 | {
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411 | //
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412 | // Get the name and try to find a container with this name
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413 | // in the parameter list.
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414 | //
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415 | const char *cname = entry->GetContName();
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416 | cont = (MParContainer*)pList->FindObject(cname);
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417 | if (!cont)
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418 | {
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419 | //
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420 | // No corresponding container is found
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421 | //
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422 | if (entry->MustHave())
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423 | {
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424 | *fLog << err << "Cannot find parameter container '" << cname << "'." << endl;
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425 | return kFALSE;
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426 | }
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427 |
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428 | *fLog << inf << "Unnecessary parameter container '" << cname << "' not found..." << endl;
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429 | delete fBranches.Remove(entry);
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430 | continue;
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431 | }
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432 |
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433 | //
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434 | // The container is found. Put the pointer into the entry.
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435 | //
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436 | entry->SetContainer(cont);
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437 | }
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438 |
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439 | //
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440 | // Get container name, tree name and tree title of this entry.
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441 | //
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442 | const char *cname = cont->GetName();
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443 | const char *tname = entry->GetName();
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444 | const TString ttitle(Form("Tree containing %s", cont->GetDescriptor().Data()));
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445 |
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446 | //
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447 | // if the tree name is NULL this idetifies it to use the default:
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448 | // the container name.
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449 | //
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450 | if (tname[0] == '\0')
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451 | tname = cname;
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452 |
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453 | //
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454 | // Check if the tree is already existing (part of the file or memory)
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455 | //
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456 | TTree *tree = fOut ? (TTree*)fOut->Get(tname) : dynamic_cast<TTree*>(gROOT->FindObject(tname));
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457 | if (!fOut && tree)
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458 | {
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459 | if (tree->GetCurrentFile())
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460 | {
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461 | *fLog << err;
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462 | *fLog << "ERROR - You are trying to write data into a memory stored root tree," << endl;
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463 | *fLog << " because you either called the default constructor or have" << endl;
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464 | *fLog << " instantiated MWriteRootFile using the write option 'memory'." << endl;
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465 | *fLog << " This tree '" << tname << "' is already existing in" << endl;
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466 | *fLog << " memory (gROOT->FindObject) and is already belonging to a" << endl;
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467 | *fLog << " file (" << tree->GetCurrentFile()->GetName() << ")." << endl;
|
---|
468 | *fLog << " This can - for example - happen if you are reading from a" << endl;
|
---|
469 | *fLog << " tree with the same name. The easiest solution in this case" << endl;
|
---|
470 | *fLog << " is to change the name of the tree you want to write to." << endl;
|
---|
471 | *fLog << endl;
|
---|
472 | return kFALSE;
|
---|
473 | }
|
---|
474 | *fLog << inf << "Tree '" << tname << "' found already in Memory... using." << endl;
|
---|
475 | }
|
---|
476 |
|
---|
477 | if (!tree)
|
---|
478 | {
|
---|
479 | //
|
---|
480 | // if the tree doesn't exist create a new tree. Use the tree
|
---|
481 | // name as title if title is NULL.
|
---|
482 | // And add the tree to the list of trees
|
---|
483 | //
|
---|
484 | TDirectory *save = gDirectory;
|
---|
485 | if (fOut)
|
---|
486 | fOut->cd();
|
---|
487 | else
|
---|
488 | gROOT->cd();
|
---|
489 |
|
---|
490 | tree = new TTree(tname, ttitle, fOut ? 99 : 1);
|
---|
491 | fTrees.AddLast(tree);
|
---|
492 |
|
---|
493 | //
|
---|
494 | // If the tree does not already exist in the file mark this
|
---|
495 | // tree as a branch created by MWriteRootFile
|
---|
496 | //
|
---|
497 | tree->SetBit(kIsNewTree);
|
---|
498 |
|
---|
499 | gDirectory = save;
|
---|
500 |
|
---|
501 | *fLog << inf << "Tree " << tname << " created." << endl;
|
---|
502 | }
|
---|
503 |
|
---|
504 | //
|
---|
505 | // In case the file is opened as 'UPDATE' the tree may still not
|
---|
506 | // be in the list. Because it neither was created previously,
|
---|
507 | // nor this time, so the corresponding entries is marked as a
|
---|
508 | // single branch to be filled. --> Add it to the list of trees.
|
---|
509 | //
|
---|
510 | if (!fTrees.FindObject(tree))
|
---|
511 | fTrees.AddLast(tree);
|
---|
512 |
|
---|
513 | //
|
---|
514 | // Now we have a valid tree. Search the list of trees for this tree
|
---|
515 | // Add a pointer to the entry in the tree list to this branch-entry
|
---|
516 | //
|
---|
517 | entry->SetTree(tree);
|
---|
518 |
|
---|
519 | TString branchname(cname);
|
---|
520 | branchname.Append(".");
|
---|
521 |
|
---|
522 | //
|
---|
523 | // Try to get the branch from the file.
|
---|
524 | // If the branch already exists the user specified one branch twice.
|
---|
525 | //
|
---|
526 | TBranch *branch = tree->GetBranch(branchname);
|
---|
527 | if (branch)
|
---|
528 | {
|
---|
529 | *fLog << inf << "Branch '" << cname << "' already existing... updating." << endl;
|
---|
530 | branch->SetAddress(entry->GetAddress());
|
---|
531 |
|
---|
532 | if (!fSplitRule.IsNull() && fOut)
|
---|
533 | {
|
---|
534 | *fLog << warn << endl;
|
---|
535 | *fLog << "WARNING: You are updating an existing branch. For this case" << endl;
|
---|
536 | *fLog << " file-splitting mode is not allowed... disabled!" << endl;
|
---|
537 | *fLog << endl;
|
---|
538 | fSplitRule = "";
|
---|
539 | }
|
---|
540 | }
|
---|
541 | else
|
---|
542 | {
|
---|
543 | //
|
---|
544 | // Create a new branch in the actual tree. The branch has the name
|
---|
545 | // container name. The type of the container is given by the
|
---|
546 | // ClassName entry in the container. The Address is the address of a
|
---|
547 | // pointer to the container (gotten from the branch entry). As
|
---|
548 | // Basket size we specify a (more or less) common default value.
|
---|
549 | // The containers should be written in Splitlevel=1
|
---|
550 | //
|
---|
551 | *fLog << inf << "Creating Branch " << cname << " of " << cont->ClassName();
|
---|
552 | *fLog << " in tree " << tree->GetName() << "... " << flush;
|
---|
553 |
|
---|
554 | branch = tree->Branch(branchname, cont->ClassName(), entry->GetAddress());
|
---|
555 |
|
---|
556 | //
|
---|
557 | // If the branch couldn't be created we have a problem.
|
---|
558 | //
|
---|
559 | if (!branch)
|
---|
560 | {
|
---|
561 | *fLog << endl;
|
---|
562 | *fLog << err << "Unable to create branch '" << cname << "'." << endl;
|
---|
563 | return kFALSE;
|
---|
564 | }
|
---|
565 |
|
---|
566 | *fLog << "done." << endl;
|
---|
567 |
|
---|
568 | if (!tree->TestBit(kIsNewTree) && !fSplitRule.IsNull())
|
---|
569 | {
|
---|
570 | *fLog << warn << endl;
|
---|
571 | *fLog << "WARNING: You have created a new branch in an existing tree." << endl;
|
---|
572 | *fLog << " For this case file-splitting mode is not allowed... disabled!" << endl;
|
---|
573 | *fLog << endl;
|
---|
574 | fSplitRule= "";
|
---|
575 | }
|
---|
576 | }
|
---|
577 |
|
---|
578 | //
|
---|
579 | // Tell the entry also which branch belongs to it (this is necessary
|
---|
580 | // for branches belonging to already existing tree, UPDATE-mode)
|
---|
581 | //
|
---|
582 | entry->SetBranch(branch);
|
---|
583 | }
|
---|
584 |
|
---|
585 | return kTRUE;
|
---|
586 | }
|
---|
587 |
|
---|
588 | // --------------------------------------------------------------------------
|
---|
589 | //
|
---|
590 | // Checks all given containers (branch entries) for the write flag.
|
---|
591 | // If the write flag is set the corresponding Tree is marked to get filled.
|
---|
592 | // All Trees which are marked to be filled are filled with all their
|
---|
593 | // branches.
|
---|
594 | // In case of a file opened in 'UPDATE' mode, single branches can be
|
---|
595 | // filled, too. WARNING - for the moment there is no check whether
|
---|
596 | // you filled the correct number of events into the branch, so that
|
---|
597 | // each of the other branches in the tree has the correct corresponding
|
---|
598 | // number of new entries in the new branch!
|
---|
599 | // Be carefull: If only one container (corresponding to a branch) of a tree
|
---|
600 | // has the write flag, all containers in this tree are filled!
|
---|
601 | //
|
---|
602 | Bool_t MWriteRootFile::CheckAndWrite()
|
---|
603 | {
|
---|
604 | TObject *obj;
|
---|
605 |
|
---|
606 | //
|
---|
607 | // Loop over all branch entries
|
---|
608 | //
|
---|
609 | TIter NextBranch(&fBranches);
|
---|
610 | while ((obj=NextBranch()))
|
---|
611 | {
|
---|
612 | MRootFileBranch *b = (MRootFileBranch*)obj;
|
---|
613 |
|
---|
614 | //
|
---|
615 | // Check for the Write flag
|
---|
616 | //
|
---|
617 | if (!b->GetContainer()->IsReadyToSave())
|
---|
618 | continue;
|
---|
619 |
|
---|
620 | //
|
---|
621 | // If the write flag of the branch entry is set, set the write flag of
|
---|
622 | // the corresponding tree entry.
|
---|
623 | //
|
---|
624 | if (b->GetTree()->TestBit(kIsNewTree))
|
---|
625 | b->GetTree()->SetBit(kFillTree);
|
---|
626 | else
|
---|
627 | {
|
---|
628 | if (!b->GetBranch()->Fill())
|
---|
629 | {
|
---|
630 | *fLog << err << "ERROR - Zero bytes written to branch '" << b->GetBranch()->GetName() << "'... abort." << endl;
|
---|
631 | return kFALSE;
|
---|
632 | }
|
---|
633 | }
|
---|
634 | }
|
---|
635 |
|
---|
636 | //
|
---|
637 | // Loop over all tree entries
|
---|
638 | //
|
---|
639 | const Int_t n = fTrees.GetEntriesFast();
|
---|
640 |
|
---|
641 | for (int idx=0; idx<n; idx++)
|
---|
642 | {
|
---|
643 | TTree *t = (TTree*)fTrees[idx];
|
---|
644 |
|
---|
645 | //
|
---|
646 | // Check the write flag of the tree
|
---|
647 | //
|
---|
648 | if (!t->TestBit(kFillTree))
|
---|
649 | continue;
|
---|
650 |
|
---|
651 | //
|
---|
652 | // If the write flag is set, fill the tree (with the corresponding
|
---|
653 | // branches/containers), delete the write flag and increase the number
|
---|
654 | // of written/filled entries.
|
---|
655 | //
|
---|
656 | t->ResetBit(kFillTree);
|
---|
657 |
|
---|
658 | if (!t->Fill())
|
---|
659 | {
|
---|
660 | *fLog << err << "ERROR - Zero bytes written to tree '" << t->GetName() << "'... abort." << endl;
|
---|
661 | return kFALSE;
|
---|
662 | }
|
---|
663 | }
|
---|
664 |
|
---|
665 | //
|
---|
666 | // If we are writing into memory we don't split into seperate files
|
---|
667 | //
|
---|
668 | if (!fOut)
|
---|
669 | return kTRUE;
|
---|
670 |
|
---|
671 | //
|
---|
672 | // For more information see TTree:ChangeFile()
|
---|
673 | //
|
---|
674 | TTree *t0 = (TTree*)fTrees[0];
|
---|
675 | if (!t0 || fOut==t0->GetCurrentFile())
|
---|
676 | return kTRUE;
|
---|
677 |
|
---|
678 | *fLog << warn << endl;
|
---|
679 | *fLog << "WARNING - MWriteRootFile: Root's TTree/TFile has opened a new file" << endl;
|
---|
680 | *fLog << " automatically. You can change this behaviour using TTree::SetMaxTreeSize." << endl;
|
---|
681 | *fLog << " You won't be able to read splitted files correctly with MReadMarsFile if" << endl;
|
---|
682 | *fLog << " they have more than one entry in 'RunHeaders' or you try to read more than" << endl;
|
---|
683 | *fLog << " one of such sequences at once." << endl;
|
---|
684 | *fLog << endl;
|
---|
685 |
|
---|
686 | return kTRUE;
|
---|
687 | }
|
---|
688 |
|
---|
689 | // --------------------------------------------------------------------------
|
---|
690 | //
|
---|
691 | // Open a new file with the ame fname. Move all trees and branches from the
|
---|
692 | // old file to the new file.
|
---|
693 | //
|
---|
694 | Bool_t MWriteRootFile::ChangeFile(const char *fname)
|
---|
695 | {
|
---|
696 | if (!fOut)
|
---|
697 | {
|
---|
698 | TObject *find = gROOT->FindObject(fname);
|
---|
699 | if (find && find->InheritsFrom(TFile::Class()))
|
---|
700 | {
|
---|
701 | fOut = (TFile*)find;
|
---|
702 | SetBit(kIsNotOwner);
|
---|
703 | return kTRUE;
|
---|
704 | }
|
---|
705 |
|
---|
706 | *fLog << err << "MWriteRootFile::ChangeFile: Expecting file '" << fname;
|
---|
707 | *fLog << "' in gROOT->FindObject... not found." << endl;
|
---|
708 | return kFALSE;
|
---|
709 | }
|
---|
710 |
|
---|
711 | //
|
---|
712 | // The following code is more or less a copy of TTree::ChangeFile
|
---|
713 | //
|
---|
714 | const Int_t compr = fOut->GetCompressionLevel();
|
---|
715 | const TString title = fOut->GetTitle();
|
---|
716 | const TString opt = fOut->GetOption();
|
---|
717 |
|
---|
718 | *fLog << inf << "MWriteRootFile - Open new file " << fname << " (Title=" << title << ", Option=" << opt << ", Compression=" << compr << ")" << endl;
|
---|
719 |
|
---|
720 | // Open new file with old setup
|
---|
721 | TFile *newfile = TFile::Open(fname, opt, title, compr);
|
---|
722 | if (!newfile)
|
---|
723 | {
|
---|
724 | *fLog << err << "ERROR - Cannot open new file " << fname << endl;
|
---|
725 | return kFALSE;
|
---|
726 | }
|
---|
727 |
|
---|
728 | // Print statistics of old file
|
---|
729 | const TString n = GetFileName();
|
---|
730 | if (!n.IsNull() && n!=TString("/dev/null"))
|
---|
731 | Print();
|
---|
732 |
|
---|
733 | if (fOut->IsOpen())
|
---|
734 | fOut->Write();
|
---|
735 |
|
---|
736 | // Move all trees from the old file to the new file
|
---|
737 | TObject *obj=0;
|
---|
738 | while ((obj = fOut->GetList()->First()))
|
---|
739 | {
|
---|
740 | // Remove obj from old file (otherwise deleting
|
---|
741 | // the old file will delete the objs)
|
---|
742 | fOut->GetList()->Remove(obj);
|
---|
743 |
|
---|
744 | // If this is not a tree do nothing.
|
---|
745 | if (!obj->InheritsFrom("TTree"))
|
---|
746 | continue;
|
---|
747 |
|
---|
748 | // process all trees in the old file
|
---|
749 | TTree *t = (TTree*)obj;
|
---|
750 |
|
---|
751 | // reset and move to new file (this is done implicitly for all branches)
|
---|
752 | t->Reset();
|
---|
753 | t->SetDirectory(newfile);
|
---|
754 | }
|
---|
755 |
|
---|
756 | // Close/delete the old file (keys already written above)
|
---|
757 | delete fOut;
|
---|
758 |
|
---|
759 | // Replace current with new file
|
---|
760 | fOut = newfile;
|
---|
761 |
|
---|
762 | // Change current directory to new file
|
---|
763 | gFile = fOut;
|
---|
764 |
|
---|
765 | return kTRUE;
|
---|
766 | }
|
---|
767 |
|
---|
768 | // --------------------------------------------------------------------------
|
---|
769 | //
|
---|
770 | // A rule looks like:
|
---|
771 | // "outputpath{s/source/destination}"
|
---|
772 | //
|
---|
773 | // outpath: the output path into which the files are written
|
---|
774 | // {s/source/destination} a substitution rule for the filename
|
---|
775 | // while source can be a regular expression everything which matches this
|
---|
776 | // regular expression (see TRegexp) will be replaced by destination.
|
---|
777 | // Warning: The algorithm is recursive you may create endless loops!
|
---|
778 | //
|
---|
779 | // Example:
|
---|
780 | // inputfile: /data/MAGIC/Period016/rootdata/20040621_23210_D_Mkn421_E.root
|
---|
781 | // rule: /outpath/{s/_D_/_Y_}
|
---|
782 | // outfile: /outpath/20040621_23210_Y_Mkn421_E.root
|
---|
783 | //
|
---|
784 | // If you need more difficult rules please send me an eMail...
|
---|
785 | //
|
---|
786 | TString MWriteRootFile::GetNewFileName(const char *inname) const
|
---|
787 | {
|
---|
788 | // Remove the path from the filename
|
---|
789 | TString fname(inname);
|
---|
790 | if (fname.Last('/')>=0)
|
---|
791 | fname.Remove(0, fname.Last('/')+1);
|
---|
792 |
|
---|
793 | // Make a copy of the rule
|
---|
794 | TString rule(fSplitRule);
|
---|
795 |
|
---|
796 | // [characte class], ^ do not, [^{}] do not match { and }, [^{}]+ match at least not one { or }
|
---|
797 | const TRegexp subst0("{s/[^{}/]+/[^{}/]+}");
|
---|
798 |
|
---|
799 | TString path;
|
---|
800 | Bool_t first = kTRUE;
|
---|
801 |
|
---|
802 | Ssiz_t idx=0;
|
---|
803 | while (1)
|
---|
804 | {
|
---|
805 | // Find a substitution exprsssion
|
---|
806 | Ssiz_t len = 0;
|
---|
807 | idx = subst0.Index(rule, &len);
|
---|
808 | if (idx<0)
|
---|
809 | break;
|
---|
810 |
|
---|
811 | // If the first substitution expression is found in the rule
|
---|
812 | // determin the path from everything before
|
---|
813 | if (first)
|
---|
814 | {
|
---|
815 | path=rule(0, idx);
|
---|
816 | first = kFALSE;
|
---|
817 | }
|
---|
818 |
|
---|
819 | // Extract a substitution expression
|
---|
820 | TString expr = rule(idx, len);
|
---|
821 | rule.Remove(idx, len);
|
---|
822 |
|
---|
823 | expr.Remove(0,3);
|
---|
824 | expr.Remove(expr.Length()-1);
|
---|
825 |
|
---|
826 | // In all cases this is well defined (see Regexp)
|
---|
827 | const Ssiz_t pos = expr.First('/');
|
---|
828 |
|
---|
829 | // Split substitution rule into source and destination
|
---|
830 | const TString src = expr(0, pos);
|
---|
831 | const TString dest = expr(pos+1, expr.Length());
|
---|
832 |
|
---|
833 | // Replace source by destination
|
---|
834 | const TRegexp regexp(src);
|
---|
835 | while (1)
|
---|
836 | {
|
---|
837 | idx = regexp.Index(fname, &len);
|
---|
838 | if (idx<0)
|
---|
839 | break;
|
---|
840 |
|
---|
841 | fname.Replace(idx, len, dest);
|
---|
842 | }
|
---|
843 | }
|
---|
844 |
|
---|
845 | // Check if we have a trailing '/'
|
---|
846 | if (!path.IsNull() && path[path.Length()-1]!='/')
|
---|
847 | path.Append("/");
|
---|
848 |
|
---|
849 | // Create full qualified pathname
|
---|
850 | path += fname;
|
---|
851 | return path;
|
---|
852 | }
|
---|
853 |
|
---|
854 | // --------------------------------------------------------------------------
|
---|
855 | //
|
---|
856 | // ReInit. If file splitting is not allowed call MWriteFile::ReInit.
|
---|
857 | //
|
---|
858 | // In other cases get MRead from the TaskList (splitting is switched of if
|
---|
859 | // this is impossible).
|
---|
860 | //
|
---|
861 | // Convert the input- into a new output file-name.
|
---|
862 | //
|
---|
863 | // Open a new file, change all trees to the new file (calling ChangeFile()),
|
---|
864 | // and close the old one.
|
---|
865 | //
|
---|
866 | // Call MWriteFile::ReInit()
|
---|
867 | //
|
---|
868 | Bool_t MWriteRootFile::ReInit(MParList *pList)
|
---|
869 | {
|
---|
870 | if (fSplitRule.IsNull() || !fOut)
|
---|
871 | return MWriteFile::ReInit(pList);
|
---|
872 |
|
---|
873 | MRead *read = (MRead*)pList->FindTask("MRead");
|
---|
874 | if (!read)
|
---|
875 | {
|
---|
876 | *fLog << warn;
|
---|
877 | *fLog << "WARNING: No Task 'MRead' found in the tasklist. This task is" << endl;
|
---|
878 | *fLog << " necessary to get the filename. Without a filename file" << endl;
|
---|
879 | *fLog << " file splitting is not allowed... disabled!" << endl;
|
---|
880 | *fLog << endl;
|
---|
881 | fSplitRule = "";
|
---|
882 | return kTRUE;
|
---|
883 | }
|
---|
884 |
|
---|
885 | const TString fname = GetNewFileName(read->GetFileName());
|
---|
886 | if (!ChangeFile(fname))
|
---|
887 | return kFALSE;
|
---|
888 |
|
---|
889 | return MWriteFile::ReInit(pList);
|
---|
890 | }
|
---|
891 |
|
---|
892 | // --------------------------------------------------------------------------
|
---|
893 | //
|
---|
894 | // return open state of the root file. If the file is 'memory' kTRUE is
|
---|
895 | // returned.
|
---|
896 | //
|
---|
897 | Bool_t MWriteRootFile::IsFileOpen() const
|
---|
898 | {
|
---|
899 | if (!fOut)
|
---|
900 | return kTRUE;
|
---|
901 |
|
---|
902 | const char *n = fOut->GetName();
|
---|
903 | return n==0 || *n==0 ? kTRUE : fOut->IsOpen();
|
---|
904 | }
|
---|
905 |
|
---|
906 | // --------------------------------------------------------------------------
|
---|
907 | //
|
---|
908 | // return name of the root-file. If the file is "memory" "<memory>" is
|
---|
909 | // returned.
|
---|
910 | //
|
---|
911 | const char *MWriteRootFile::GetFileName() const
|
---|
912 | {
|
---|
913 | if (!fOut)
|
---|
914 | return "<memory>";
|
---|
915 |
|
---|
916 | const char *n = fOut->GetName();
|
---|
917 | return n==0 || *n==0 ? "<dummy>" : n;
|
---|
918 | }
|
---|
919 |
|
---|
920 | // --------------------------------------------------------------------------
|
---|
921 | //
|
---|
922 | // cd into file. See TFile::cd(). If the file is "memory" kTRUE is returned.
|
---|
923 | //
|
---|
924 | Bool_t MWriteRootFile::cd(const char *path)
|
---|
925 | {
|
---|
926 | return fOut ? fOut->cd(path) : kTRUE;
|
---|
927 | }
|
---|
928 |
|
---|
929 | void MWriteRootFile::RecursiveRemove(TObject *obj)
|
---|
930 | {
|
---|
931 | if (obj==fOut && TestBit(kIsNotOwner))
|
---|
932 | {
|
---|
933 | ResetBit(kIsNotOwner);
|
---|
934 | fOut=0;
|
---|
935 | }
|
---|
936 | }
|
---|
937 |
|
---|
938 | // --------------------------------------------------------------------------
|
---|
939 | //
|
---|
940 | // Implementation of SavePrimitive. Used to write the call to a constructor
|
---|
941 | // to a macro. In the original root implementation it is used to write
|
---|
942 | // gui elements to a macro-file.
|
---|
943 | //
|
---|
944 | void MWriteRootFile::StreamPrimitive(ofstream &out) const
|
---|
945 | {
|
---|
946 | out << " MWriteRootFile " << GetUniqueName();
|
---|
947 | if (fOut)
|
---|
948 | {
|
---|
949 | out << "(\"";
|
---|
950 | out << fOut->GetName() << "\", \"";
|
---|
951 | out << fOut->GetOption() << "\", \"";
|
---|
952 | out << fOut->GetTitle() << "\", ";
|
---|
953 | out << fOut->GetCompressionLevel();
|
---|
954 | out << ")";
|
---|
955 | }
|
---|
956 | out << ";" << endl;
|
---|
957 |
|
---|
958 | if (fName!=gsDefName)
|
---|
959 | out << " " << GetUniqueName() << ".SetName(\"" << fName << "\");" << endl;
|
---|
960 | if (fTitle!=gsDefTitle)
|
---|
961 | out << " " << GetUniqueName() << ".SetTitle(\"" << fTitle << "\");" << endl;
|
---|
962 |
|
---|
963 | MRootFileBranch *entry;
|
---|
964 | TIter Next(&fBranches);
|
---|
965 | while ((entry=(MRootFileBranch*)Next()))
|
---|
966 | {
|
---|
967 | out << " " << GetUniqueName() << ".AddContainer(";
|
---|
968 |
|
---|
969 | if (entry->GetContainer())
|
---|
970 | {
|
---|
971 | entry->GetContainer()->SavePrimitive(out);
|
---|
972 | out << "&" << entry->GetContainer()->GetUniqueName();
|
---|
973 | }
|
---|
974 | else
|
---|
975 | out << "\"" << entry->GetContName() << "\"";
|
---|
976 |
|
---|
977 | out << ", \"" << entry->GetName() << "\"";
|
---|
978 | if (!entry->MustHave())
|
---|
979 | out << ", kFALSE";
|
---|
980 |
|
---|
981 | out <<");" << endl;
|
---|
982 | }
|
---|
983 | }
|
---|
984 |
|
---|