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source: trunk/MagicSoft/Mars/mjobs/MJCalibrateSignal.cc@ 6724

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Last change on this file since 6724 was 6700, checked in by gaug, 21 years ago
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1	/* ======================================================================== *\
2	!
3	! *
4	! * This file is part of MARS, the MAGIC Analysis and Reconstruction
5	! * Software. It is distributed to you in the hope that it can be a useful
6	! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
7	! * It is distributed WITHOUT ANY WARRANTY.
8	! *
9	! * Permission to use, copy, modify and distribute this software and its
10	! * documentation for any purpose is hereby granted without fee,
11	! * provided that the above copyright notice appear in all copies and
12	! * that both that copyright notice and this permission notice appear
13	! * in supporting documentation. It is provided "as is" without express
14	! * or implied warranty.
15	! *
16	!
17	!
18	! Author(s): Thomas Bretz, 1/2004 <mailto:tbretz@astro.uni-wuerzburg.de>
19	!
20	! Copyright: MAGIC Software Development, 2000-2004
21	!
22	!
23	\* ======================================================================== */
24
25	/////////////////////////////////////////////////////////////////////////////
26	//
27	// MJCalibrateSignal
28	//
29	// This class is reading the output written by callisto. It calibrates
30	// signal and time.
31	//
32	// The signal and time extractors are read from the callisto-output. In
33	// pricipal you could overwrite these default using the resource file,
34	// but this is NOT recommended!
35	//
36	/////////////////////////////////////////////////////////////////////////////
37	#include "MJCalibrateSignal.h"
38
39	#include <TEnv.h>
40	#include <TFile.h>
41
42	#include "MLog.h"
43	#include "MLogManip.h"
44
45	#include "MDirIter.h"
46	#include "MRunIter.h"
47	#include "MParList.h"
48	#include "MTaskList.h"
49	#include "MEvtLoop.h"
50
51	#include "MStatusDisplay.h"
52
53	#include "MGeomCam.h"
54	#include "MHCamEvent.h"
55	#include "MPedestalCam.h"
56	#include "MBadPixelsCam.h"
57	#include "MArrivalTimeCam.h"
58
59	#include "MCalibrationQECam.h"
60	#include "MCalibrationBlindCam.h"
61	#include "MCalibrationChargeCam.h"
62	#include "MCalibrationRelTimeCam.h"
63	#include "MCalibrationChargePINDiode.h"
64	#include "MCalibrationHiLoCam.h"
65	#include "MCalibrationPulseTimeCam.h"
66	#include "MCalibrationPatternDecode.h"
67
68	#include "MCalibrationChargeCalc.h"
69	#include "MCalibrationRelTimeCalc.h"
70
71	#include "MCalibrationIntensityChargeCam.h"
72	#include "MCalibrationIntensityBlindCam.h"
73	#include "MCalibrationIntensityRelTimeCam.h"
74	#include "MCalibrationIntensityQECam.h"
75	#include "MBadPixelsIntensityCam.h"
76
77	#include "MHCalibrationChargeCam.h"
78	#include "MHCalibrationChargeBlindCam.h"
79	#include "MHCalibrationChargePINDiode.h"
80	#include "MHCalibrationRelTimeCam.h"
81	#include "MHCalibrationPulseTimeCam.h"
82	#include "MHCalibrationHiLoCam.h"
83	#include "MHCamera.h"
84
85	#include "MCalibCalcFromPast.h"
86
87	#include "MReadReports.h"
88	#include "MReadMarsFile.h"
89	#include "MRawFileRead.h"
90	#include "MContinue.h"
91	#include "MTriggerPatternDecode.h"
92	#include "MFTriggerPattern.h"
93	#include "MGeomApply.h"
94	//#include "MMcPedestalCopy.h"
95	#include "MPointingPosCalc.h"
96	#include "MPointingPosInterpolate.h"
97	#include "MPedCalcFromLoGain.h"
98	#include "MExtractor.h"
99	#include "MExtractTimeAndCharge.h"
100	#include "MExtractPINDiode.h"
101	#include "MExtractBlindPixel.h"
102	#include "MFCosmics.h"
103	#include "MTaskEnv.h"
104	#include "MCalibrateData.h"
105	#include "MCalibrateRelTimes.h"
106	#include "MBadPixelsMerge.h"
107	#include "MBadPixelsCalc.h"
108	#include "MBadPixelsTreat.h"
109	#include "MFillH.h"
110	#include "MWriteRootFile.h"
111
112	ClassImp(MJCalibrateSignal);
113
114	using namespace std;
115
116	// --------------------------------------------------------------------------
117	//
118	// Default constructor.
119	//
120	// Sets:
121	// - fIsInterlaced to kTRUE
122	// - fIsRelTimesUpdate to kFALSE
123	// - fIsHiLoCalibration to kFALSE
124	//
125	MJCalibrateSignal::MJCalibrateSignal(const char name, const char title)
126	: fIsInterlaced(kTRUE), fIsRelTimesUpdate(kFALSE), fIsHiLoCalibration(kFALSE)
127	{
128	fName = name ? name : "MJCalibrateSignal";
129	fTitle = title ? title : "Tool to calibrate data";
130
131	//fCruns = NULL;
132	}
133
134	const char* MJCalibrateSignal::GetInputFile() const
135	{
136	const TString name(GetInputFileName());
137	if (name.IsNull())
138	return "";
139
140	return Form("%s/%s", fPathIn.Data(), name.Data());
141	}
142
143	const char* MJCalibrateSignal::GetInputFileName() const
144	{
145
146	if (fSequence.IsValid())
147	return Form("calib%08d.root", fSequence.GetSequence());
148
149	// if (!fCruns)
150	return "";
151
152	// return Form("%s-F1.root", (const char*)fCruns->GetRunsAsFileName());
153	}
154
155	Bool_t MJCalibrateSignal::WriteResult(TObjArray &cont)
156	{
157	const TString name(Form("signal%08d.root", fSequence.GetSequence()));
158	return WriteContainer(cont, name);
159	}
160
161	Bool_t MJCalibrateSignal::ReadCalibration(TObjArray &l, MBadPixelsCam &cam, MExtractor* &ext1, MExtractor* &ext2, TString &geom) const
162	{
163
164	const TString fname = GetInputFile();
165
166	*fLog << inf << "Reading from file: " << fname << endl;
167
168	TFile file(fname, "READ");
169	if (!file.IsOpen())
170	{
171	*fLog << err << dbginf << "ERROR - Could not open file " << fname << endl;
172	return kFALSE;
173	}
174
175	TObject *o = file.Get("ExtractSignal");
176	if (o && !o->InheritsFrom(MExtractor::Class()))
177	{
178	*fLog << err << dbginf << "ERROR - ExtractSignal read from " << fname << " doesn't inherit from MExtractor!" << endl;
179	return kFALSE;
180	}
181	ext1 = o ? (MExtractor*)o->Clone() : NULL;
182
183	o = file.Get("ExtractTime");
184	if (o && !o->InheritsFrom(MExtractor::Class()))
185	{
186	*fLog << err << dbginf << "ERROR - ExtractTime read from " << fname << " doesn't inherit from MExtractor!" << endl;
187	return kFALSE;
188	}
189	ext2 = o ? (MExtractor*)o->Clone() : NULL;
190	if (!ext1 && !ext2)
191	{
192	*fLog << err << dbginf << "ERROR - Neither ExtractSignal nor ExrtractTime found in " << fname << "!" << endl;
193	return kFALSE;
194	}
195
196	o = file.Get("MGeomCam");
197	if (o && !o->InheritsFrom(MGeomCam::Class()))
198	{
199	*fLog << err << dbginf << "ERROR - MGeomCam read from " << fname << " doesn't inherit from MGeomCam!" << endl;
200	return kFALSE;
201	}
202	geom = o ? o->ClassName() : "";
203
204	TObjArray cont(l);
205	cont.Add(&cam);
206	return ReadContainer(cont);
207	}
208
209	// --------------------------------------------------------------------------
210	//
211	// MJCalibration allows to setup several option by a resource file:
212	// MJCalibrateSignal.RawData: yes,no
213	//
214	// For more details see the class description and the corresponding Getters
215	//
216	Bool_t MJCalibrateSignal::CheckEnvLocal()
217	{
218
219	SetInterlaced(GetEnv("Interlaced", fIsInterlaced));
220	SetRelTimesUpdate(GetEnv("RelTimesUpdate", fIsRelTimesUpdate));
221	SetHiLoCalibration(GetEnv("HiLoCalibration", fIsHiLoCalibration));
222
223	return MJCalib::CheckEnvLocal();
224	}
225
226	Bool_t MJCalibrateSignal::ProcessFile(MPedestalCam &pedcamab, MPedestalCam &pedcambias,
227	MPedestalCam &pedcamextr)
228	{
229	if (!fSequence.IsValid())
230	{
231	if (!fRuns)
232	{
233	*fLog << err << "ERROR - Sequence invalid and no runs chosen!" << endl;
234	return kFALSE;
235	}
236
237	if (fRuns->GetNumRuns() != fRuns->GetNumEntries())
238	{
239	*fLog << err << "Number of files found doesn't match number of runs... abort."
240	<< fRuns->GetNumRuns() << " vs. " << fRuns->GetNumEntries() << endl;
241	return kFALSE;
242	}
243	*fLog << "Calibrate data from ";
244	*fLog << "Runs " << fRuns->GetRunsAsString() << endl;
245	*fLog << endl;
246	}
247
248	//if (!CheckEnv())
249	// return kFALSE;
250
251	CheckEnv();
252
253	// --------------------------------------------------------------------------------
254
255	*fLog << inf;
256	fLog->Separator(GetDescriptor());
257	*fLog << "Calculate calibrated data from runs ";
258	*fLog << fSequence.GetName() << endl;
259	*fLog << endl;
260
261	// --------------------------------------------------------------------------------
262
263	MDirIter iter;
264	if (fSequence.IsValid())
265	{
266	const Int_t n0 = fSequence.SetupDatRuns(iter, fPathData, "D", IsUseRawData());
267	const Int_t n1 = fSequence.GetNumDatRuns();
268	if (n0==0)
269	{
270	*fLog << err << "ERROR - No input files of sequence found!" << endl;
271	return kFALSE;
272	}
273	if (n0!=n1)
274	{
275	*fLog << err << "ERROR - Number of files found (" << n0 << ") doesn't match number of files in sequence (" << n1 << ")" << endl;
276	return kFALSE;
277	}
278	}
279
280	// Read File
281	MCalibrationIntensityChargeCam ichcam;
282	MCalibrationIntensityQECam iqecam;
283	MCalibrationIntensityBlindCam iblcam;
284	MCalibrationIntensityRelTimeCam itmcam;
285	MBadPixelsIntensityCam ibdcam;
286
287	MHCalibrationChargeCam hchacam;
288	MHCalibrationChargeBlindCam hbndcam;
289	MHCalibrationChargePINDiode hpndiod;
290	MHCalibrationRelTimeCam hrelcam;
291
292	MCalibrationChargeCam calcam;
293	MCalibrationQECam qecam;
294	MCalibrationBlindCam bndcam;
295	MCalibrationChargePINDiode pind;
296	MCalibrationRelTimeCam tmcam;
297	MCalibrationHiLoCam hilcam;
298	MCalibrationPulseTimeCam pulcam;
299
300	MBadPixelsCam badpix;
301
302	TObjArray interlacedcont;
303	if (fIsInterlaced)
304	{
305	interlacedcont.Add(&ichcam);
306	interlacedcont.Add(&iqecam);
307	interlacedcont.Add(&iblcam);
308	interlacedcont.Add(&itmcam);
309	interlacedcont.Add(&ibdcam);
310	interlacedcont.Add(&hchacam);
311	interlacedcont.Add(&hbndcam);
312	interlacedcont.Add(&hpndiod);
313	if (fIsRelTimesUpdate)
314	interlacedcont.Add(&hrelcam);
315	}
316
317	MExtractor *extractor1=0;
318	MExtractor *extractor2=0;
319	MExtractor *extractor3=0;
320	TString geom;
321
322	TObjArray calibcont;
323	calibcont.Add(&calcam);
324	calibcont.Add(&qecam);
325	calibcont.Add(&bndcam);
326	calibcont.Add(&pind);
327	calibcont.Add(&tmcam);
328
329	if (!ReadCalibration(calibcont, badpix, extractor1, extractor2, geom))
330	return kFALSE;
331
332	*fLog << all;
333	if (extractor1)
334	{
335	*fLog << underline << "Signal Extractor found in calibration file" << endl;
336	extractor1->Print();
337	*fLog << endl;
338	extractor3 = (MExtractor*)extractor1->Clone();
339	}
340	else
341	*fLog << inf << "No Signal Extractor: ExtractSignal in file." << endl;
342
343	if (extractor2)
344	{
345	*fLog << underline << "Time Extractor found in calibration file" << endl;
346	extractor2->Print();
347	*fLog << endl;
348	}
349	else
350	*fLog << inf << "No Time Extractor: ExtractTime in file." << endl;
351
352	if (!geom.IsNull())
353	*fLog << inf << "Camera geometry found in file: " << geom << endl;
354	else
355	*fLog << inf << "No Camera geometry found using default <MGeomCamMagic>" << endl;
356
357	// This is necessary for the case in which it is not in the files
358	MBadPixelsCam badcam;
359
360	// Setup Parlist
361	MParList plist;
362	plist.AddToList(this); // take care of fDisplay!
363	plist.AddToList(&badcam);
364	plist.AddToList(&hilcam);
365	plist.AddToList(&calibcont); // Using AddToList(TObjArray *)
366	plist.AddToList(&interlacedcont); // Using AddToList(TObjArray *)
367	plist.AddToList(&pulcam);
368
369	// Setup Tasklist
370	MTaskList tlist;
371	plist.AddToList(&tlist);
372
373	MReadReports readreal;
374	readreal.AddTree("Events", "MTime.", kTRUE);
375	readreal.AddTree("Trigger");
376	readreal.AddTree("Camera");
377	readreal.AddTree("Drive");
378	readreal.AddTree("CC");
379	readreal.AddTree("Currents");
380
381	MReadMarsFile readmc("Events");
382	readmc.DisableAutoScheme();
383
384	MRawFileRead rawread(NULL);
385
386	MRead *read = 0;
387	switch (GetDataFlag())
388	{
389	case kIsUseRawData: read = &rawread; break;
390	case kIsUseMC: read = &readmc; break;
391	case kIsUseRootData: read = &readreal; break;
392	}
393	read->AddFiles(fSequence.IsValid() ? iter : *fRuns);
394
395	const TString fname(Form("%s{s/_D_/_Y_}{s/.raw$/.root}", fPathOut.Data()));
396
397	// Write the special MC tree
398	MWriteRootFile writemc(2, fname, fOverwrite?"RECREATE":"NEW");
399	writemc.SetName("WriteMC");
400	writemc.AddContainer("MMcEvtBasic", "OriginalMC");
401
402	// Skips empty MC events (Not necessary, but faster!)
403	MContinue contmc("MRawEvtData.GetNumPixels<0.5", "ContEmptyMC");
404
405	MPointingPosInterpolate pextr;
406	pextr.AddFiles(&iter);
407
408	MGeomApply apply; // Only necessary to create geometry
409	if (!geom.IsNull())
410	apply.SetGeometry(geom);
411	MBadPixelsMerge merge(&badpix);
412
413	// Make sure that pedcamab has the correct name
414	pedcamab.SetName("MPedestalFundamental");
415	pedcamextr.SetName("MPedestalFromExtractorRndm");
416	pedcambias.SetName("MPedestalFromExtractor");
417	plist.AddToList(&pedcamextr);
418	plist.AddToList(&pedcambias);
419	plist.AddToList(&pedcamab);
420
421	MArrivalTimeCam timecam;
422	plist.AddToList(&timecam);
423
424	// Check for interleaved events
425	MCalibrationPatternDecode caldec;
426	MTriggerPatternDecode decode;
427
428	MFTriggerPattern ftp;
429	// ftp.RequireCalibration();
430	ftp.DenyCalibration();
431	ftp.DenyPedestal();
432	// ftp.DenyPinDiode();
433	ftp.SetInverted();
434	MContinue conttp(&ftp, "ContTrigPattern");
435	// --> tlist2
436
437	// Do signal and pedestal calculation
438	MPedCalcFromLoGain pedlo1("MPedCalcFundamental");
439	pedlo1.SetPedestalUpdate(kTRUE);
440	pedlo1.SetNamePedestalCamOut("MPedestalFundamental");
441
442	MPedCalcFromLoGain pedlo2("MPedCalcWithExtractorRndm");
443	pedlo2.SetPedestalUpdate(kTRUE);
444	pedlo2.SetRandomCalculation(kTRUE);
445	pedlo2.SetNamePedestalCamIn("MPedestalFundamental");
446	pedlo2.SetNamePedestalCamOut("MPedestalFromExtractorRndm");
447
448	MPedCalcFromLoGain pedlo3("MPedCalcWithExtractor");
449	pedlo3.SetPedestalUpdate(kTRUE);
450	pedlo3.SetRandomCalculation(kFALSE);
451	pedlo3.SetNamePedestalCamIn("MPedestalFundamental");
452	pedlo3.SetNamePedestalCamOut("MPedestalFromExtractor");
453
454	if (extractor1)
455	{
456	extractor1->SetPedestals(&pedcamab);
457
458	if (extractor1->InheritsFrom("MExtractTimeAndCharge"))
459	{
460	pedlo2.SetExtractor((MExtractTimeAndCharge*)extractor1);
461	pedlo3.SetExtractor((MExtractTimeAndCharge*)extractor1);
462	const Int_t win = ((MExtractTimeAndCharge*)extractor1)->GetWindowSizeHiGain();
463	pedlo1.SetExtractWindow(15, win);
464	pedlo2.SetExtractWindow(15, win/obsolete/);
465	pedlo3.SetExtractWindow(15, win/obsolete/);
466	}
467	else
468	{
469	// FIXME: How to get the fixed value 15 automatically?
470	const Int_t f = (Int_t)(15.5+extractor1->GetHiGainFirst());
471	const Int_t n = (Int_t)(15.5+extractor1->GetNumHiGainSamples());
472	pedlo1.SetExtractWindow(f, n);
473	pedlo2.SetExtractWindow(f, n);
474	pedlo3.SetExtractWindow(f, n);
475	}
476	}
477	if (extractor2)
478	extractor2->SetPedestals(&pedcamab);
479
480	if (extractor3)
481	extractor3->SetPedestals(&pedcamab);
482
483	MFCosmics fcosmics;
484	fcosmics.SetNamePedestalCam("MPedestalFundamental");
485	MContinue contcos(&fcosmics, "ContTrigEvts");
486	contcos.SetInverted();
487
488	//MMcPedestalCopy pcopy;
489	MTaskEnv taskenv1("ExtractSignal");
490	MTaskEnv taskenv2("ExtractTime");
491	MTaskEnv taskenv3("ExtractInterlaced");
492	taskenv1.SetDefault(extractor1);
493	taskenv2.SetDefault(extractor2);
494	taskenv3.SetDefault(extractor3);
495
496	//
497	// This is new calibration to eff. photo-electrons, hard-coded as decided
498	// at the Wuerzburg software meeting 26.01.05
499	//
500	#warning Default calibration now in equiv. photo-electrons!
501	MCalibrateData calib;
502	calib.SetSignalType(MCalibrateData::kPhe);
503	//----- WORKAROUND: Currently MC has no lo-gain switch ------
504	//if (IsUseMC()) // MC file
505	//{
506	// calib.SetCalibrationMode(MCalibrateData::kFfactor);
507	// calib.SetPedestalFlag(MCalibrateData::kRun);
508	// // FIXME: What to do for MC files???
509	// calib.AddPedestal("MPedestalCam", "MPedPhotFundamental");
510	// calib.AddPedestal("MPedestalCam", "MPedPhotFromExtractor");
511	// calib.AddPedestal("MPedestalCam", "MPedPhotFromExtractorRndm");
512	//}
513	//else
514	//{
515	calib.AddPedestal("Fundamental");
516	calib.AddPedestal("FromExtractor");
517	calib.AddPedestal("FromExtractorRndm");
518	calib.SetPedestalFlag(MCalibrateData::kEvent);
519	//}
520	//----------------------------------------------------------
521
522	MExtractPINDiode pinext;
523	MExtractBlindPixel bldext;
524
525	MFTriggerPattern fcalib("CalibFilter");
526	fcalib.RequireCalibration();
527
528	MCalibrationChargeCalc chcalc;
529	MCalibrationRelTimeCalc recalc;
530	MCalibCalcFromPast pacalc;
531	chcalc.SetOutputFile("");
532	recalc.SetOutputFile("");
533
534	pinext.SetPedestals(&pedcamab);
535	bldext.SetPedestals(&pedcamab);
536	chcalc.SetPedestals(&pedcamextr);
537
538	pacalc.SetChargeCalc(&chcalc);
539	if (fIsRelTimesUpdate)
540	pacalc.SetRelTimeCalc(&recalc);
541	pacalc.SetCalibrate(&calib);
542
543	//
544	// Intensity Calibration histogramming
545	//
546	MFillH filpin("MHCalibrationChargePINDiode", "MExtractedSignalPINDiode", "FillPINDiode");
547	MFillH filbnd("MHCalibrationChargeBlindCam", "MExtractedSignalBlindPixel", "FillBlindCam");
548	MFillH filcam("MHCalibrationChargeCam", "MExtractedSignalCam", "FillChargeCam");
549	MFillH filtme("MHCalibrationRelTimeCam", "MArrivalTimeCam", "FillRelTime");
550	MFillH filhil("MHCalibrationHiLoCam", "MExtractedSignalCam", "FillHiLoRatio");
551	MFillH filpul("MHCalibrationPulseTimeCam", "MExtractedSignalCam", "FillPulseTime");
552
553	filpin.SetBit(MFillH::kDoNotDisplay);
554	filbnd.SetBit(MFillH::kDoNotDisplay);
555	filcam.SetBit(MFillH::kDoNotDisplay);
556	filtme.SetBit(MFillH::kDoNotDisplay);
557	filhil.SetBit(MFillH::kDoNotDisplay);
558	filpul.SetBit(MFillH::kDoNotDisplay);
559
560	MCalibrateRelTimes caltm;
561	MBadPixelsCalc bpcal;
562	MBadPixelsTreat treat;
563
564	bpcal.SetNamePedPhotCam("MPedPhotFromExtractor");
565	treat.AddNamePedPhotCam("MPedPhotFundamental");
566	treat.AddNamePedPhotCam("MPedPhotFromExtractor");
567	treat.AddNamePedPhotCam("MPedPhotFromExtractorRndm");
568	if (!extractor2 && !extractor1->InheritsFrom("MExtractTimeAndCharge"))
569	treat.SetProcessTimes(kFALSE);
570
571	MHCamEvent evt0(0, "PedFLG", "Fundamental Pedestal from Lo Gain;;P [cnts/sl]");
572	MHCamEvent evt1(2, "PedRmsFLG", "RMS from Extractor applied to ped.;;\\sigma_{p} [cnts/sl]");
573	MHCamEvent evt2(0, "Extra'd", "Extracted Signal;;S [cnts/sl]");
574	// MHCamEvent evt3(4, "PedPhot", "Calibrated Pedestal;;P [phe]");
575	MHCamEvent evt4(5, "PedRMS", "Calibrated RMS from Extractor applied to ped.;;\\sigma_{p} [phe]");
576	MHCamEvent evt5(0, "Interp'd", "Interpolated Signal;;S [phe]");
577	MHCamEvent evt6(2, "Unsuitable", "Fraction of unsuitable events per Pixel;;[1]");
578	MHCamEvent evt7(0, "Times", "Calibrated Arrival Time;;T [fadc sl]");
579	MHCamEvent evt8(0, "Conv", "Calibration Conv. Factors;;[phe/fadc cnts]");
580
581	evt0.EnableSqrtVariance();
582	evt1.EnableSqrtVariance();
583	evt2.EnableSqrtVariance();
584	// evt3.EnableVariance();
585	evt4.EnableSqrtVariance();
586	evt5.EnableSqrtVariance();
587	evt7.EnableSqrtVariance();
588	evt8.EnableSqrtVariance();
589
590	MFillH fill0(&evt0, "MPedestalFundamental", "FillPedFLG");
591	MFillH fill1(&evt1, "MPedestalFromExtractorRndm", "FillPedRmsFLG");
592	MFillH fill2(&evt2, "MExtractedSignalCam", "FillExtracted");
593	// MFillH fill3(&evt3, "MPedPhotFundamental", "FillPedPhot");
594	MFillH fill4(&evt4, "MPedPhotFromExtractorRndm", "FillPedRMS");
595	MFillH fill5(&evt5, "MCerPhotEvt", "FillInterpolated");
596	MFillH fill6(&evt6, "MBadPixelsCam", "FillUnsuitable");
597	MFillH fill7(&evt7, "MArrivalTime", "FillTimes");
598	MFillH fill8(&evt8, "MCalibConstCam", "FillConv");
599
600	MTaskEnv fillflorian("FinalFantasy");
601	fillflorian.SetDefault();
602
603	// The second rule is for the case reading raw-files!
604	MWriteRootFile write(2, fname, fOverwrite?"RECREATE":"NEW");
605	// Run Header
606	write.AddContainer("MRawRunHeader", "RunHeaders");
607	write.AddContainer("MBadPixelsCam", "RunHeaders");
608	write.AddContainer("MGeomCam", "RunHeaders");
609	// Monte Carlo Headers
610	write.AddContainer("MMcRunHeader", "RunHeaders", kFALSE);
611	write.AddContainer("MMcFadcHeader", "RunHeaders", kFALSE);
612	write.AddContainer("MMcTrigHeader", "RunHeaders", kFALSE);
613	write.AddContainer("MMcConfigRunHeader", "RunHeaders", kFALSE);
614	write.AddContainer("MMcCorsikaRunHeader", "RunHeaders", kFALSE);
615	// Monte Carlo
616	write.AddContainer("MMcEvt", "Events", kFALSE);
617	write.AddContainer("MMcTrig", "Events", kFALSE);
618	// Data tree
619	write.AddContainer("MCerPhotEvt", "Events");
620	write.AddContainer("MPedPhotFundamental", "Events");
621	write.AddContainer("MPedPhotFromExtractor", "Events");
622	write.AddContainer("MPedPhotFromExtractorRndm", "Events");
623	write.AddContainer("MTime", "Events", kFALSE);
624	write.AddContainer("MRawEvtHeader", "Events");
625	write.AddContainer("MArrivalTime", "Events", kFALSE);
626	write.AddContainer("MPointingPos", "Events", kFALSE);
627	// Slow-Control: Current-tree
628	write.AddContainer("MTimeCurrents", "Currents", kFALSE);
629	write.AddContainer("MCameraDC", "Currents", kFALSE);
630	write.AddContainer("MReportCurrents", "Currents", kFALSE);
631	// Slow-Control: Camera-tree
632	write.AddContainer("MReportCamera", "Camera", kFALSE);
633	write.AddContainer("MTimeCamera", "Camera", kFALSE);
634	write.AddContainer("MCameraAUX", "Camera", kFALSE);
635	write.AddContainer("MCameraCalibration", "Camera", kFALSE);
636	write.AddContainer("MCameraCooling", "Camera", kFALSE);
637	write.AddContainer("MCameraHV", "Camera", kFALSE);
638	write.AddContainer("MCameraLV", "Camera", kFALSE);
639	write.AddContainer("MCameraLids", "Camera", kFALSE);
640	// Slow-Control: Trigger-tree
641	write.AddContainer("MReportTrigger", "Trigger", kFALSE);
642	write.AddContainer("MTimeTrigger", "Trigger", kFALSE);
643	// Slow-Control: Drive-tree
644	write.AddContainer("MReportDrive", "Drive", kFALSE);
645	write.AddContainer("MTimeDrive", "Drive", kFALSE);
646	// Slow-Control: Central Control-tree
647	write.AddContainer("MReportCC", "CC", kFALSE);
648	write.AddContainer("MTimeCC", "CC", kFALSE);
649
650	// Now setup tasklist for events
651	MTaskList tlist2;
652
653	tlist2.AddToList(&caldec);
654	tlist2.AddToList(&decode);
655	tlist2.AddToList(&apply);
656	tlist2.AddToList(&merge);
657	//----- WORKAROUND: Currently MC has no lo-gain switch ------
658	//if (IsUseMC())
659	// tlist2.AddToList(&pcopy);
660	//else
661	//{
662	tlist2.AddToList(&pedlo1);
663	tlist2.AddToList(&pedlo2);
664	tlist2.AddToList(&pedlo3);
665	//}
666	//-----------------------------------------------------------
667	if (fIsInterlaced)
668	{
669	pinext.SetFilter(&fcalib);
670	bldext.SetFilter(&fcalib);
671	taskenv3.SetFilter(&fcalib);
672	pacalc.SetFilter(&fcalib);
673	filcam.SetFilter(&fcalib);
674	filtme.SetFilter(&fcalib);
675	filbnd.SetFilter(&fcalib);
676	filpin.SetFilter(&fcalib);
677	chcalc.SetFilter(&fcalib);
678	recalc.SetFilter(&fcalib);
679
680	tlist2.AddToList(&fcalib);
681	tlist2.AddToList(&pinext);
682	tlist2.AddToList(&bldext);
683	tlist2.AddToList(&taskenv3);
684	tlist2.AddToList(&pacalc);
685	tlist2.AddToList(&filcam);
686	if (fIsRelTimesUpdate)
687	tlist2.AddToList(&filtme);
688	tlist2.AddToList(&filbnd);
689	tlist2.AddToList(&filpin);
690	tlist2.AddToList(&chcalc);
691	if (fIsRelTimesUpdate)
692	tlist2.AddToList(&recalc);
693	}
694
695	tlist2.AddToList(&conttp);
696	if (extractor1)
697	tlist2.AddToList(&taskenv1);
698	if (extractor2)
699	tlist2.AddToList(&taskenv2);
700	tlist2.AddToList(&fill0);
701	tlist2.AddToList(&fill1);
702	tlist2.AddToList(&contcos);
703	if (fIsHiLoCalibration)
704	tlist2.AddToList(&filhil);
705	tlist2.AddToList(&filpul);
706	tlist2.AddToList(&fill2);
707	tlist2.AddToList(&calib);
708	if (extractor2 \|\| extractor1->InheritsFrom("MExtractTimeAndCharge"))
709	tlist2.AddToList(&caltm);
710	if (fIsInterlaced)
711	tlist2.AddToList(&fill8);
712	tlist2.AddToList(&bpcal);
713	tlist2.AddToList(&treat);
714	tlist2.AddToList(&fill6);
715	// tlist2.AddToList(&fill3);
716	tlist2.AddToList(&fill4);
717	tlist2.AddToList(&fill5);
718	if (extractor2 \|\| extractor1->InheritsFrom("MExtractTimeAndCharge"))
719	tlist2.AddToList(&fill7);
720
721	tlist2.AddToList(&fillflorian);
722
723	// Setup List for Drive-tree
724	MPointingPosCalc pcalc;
725
726	// Now setup main tasklist
727	tlist.AddToList(read);
728	if (IsUseMC())
729	tlist.AddToList(&writemc);
730	tlist.AddToList(&contmc);
731
732	if (IsUseRootData())
733	tlist2.AddToList(&pextr);
734	tlist.AddToList(&tlist2, IsUseRootData() ? "Events" : "All");
735
736	if (IsUseMC())
737	tlist.AddToList(&pcalc, "Drive");
738
739	tlist.AddToList(&write);
740
741	// Create and setup the eventloop
742	MEvtLoop evtloop(fName);
743	evtloop.SetParList(&plist);
744	evtloop.SetDisplay(fDisplay);
745	evtloop.SetLogStream(fLog);
746	if (!SetupEnv(evtloop))
747	return kFALSE;
748
749	// Execute first analysis
750	const Bool_t rc = evtloop.Eventloop(fMaxEvents);
751
752	// Print statistics
753	if (read->GetNumExecutions()>0)
754	tlist.PrintStatistics();
755
756	// make sure owned object are deleted
757	if (extractor1)
758	delete extractor1;
759	if (extractor2)
760	delete extractor2;
761	if (extractor3)
762	delete extractor3;
763
764	// return if job failed
765	if (!rc)
766	{
767	*fLog << err << GetDescriptor() << ": Failed." << endl;
768	return kFALSE;
769	}
770
771	// if everything went ok write and display result
772	DisplayResult(plist);
773
774	if (fPixelCheck)
775	{
776	MHCalibrationPulseTimeCam pcam = (MHCalibrationPulseTimeCam)plist.FindObject("MHCalibrationPulseTimeCam");
777	MHCalibrationPix &pix1 = (*pcam)[fCheckedPixId];
778	pix1.DrawClone("");
779
780	if (fIsHiLoCalibration)
781	{
782	MHCalibrationHiLoCam hcam = (MHCalibrationHiLoCam)plist.FindObject("MHCalibrationHiLoCam");
783	MHCalibrationPix &pix2 = (*hcam)[fCheckedPixId];
784	pix2.DrawClone("");
785	}
786	}
787
788	if (!WriteResult(interlacedcont))
789	return kFALSE;
790
791	TObjArray addcont;
792	addcont.Add(&pulcam);
793
794	if (fIsHiLoCalibration)
795	addcont.Add(&hilcam);
796
797	if (IsHistsStorage())
798	{
799	addcont.Add(plist.FindObject("MHCalibrationHiLoCam"));
800	addcont.Add(plist.FindObject("MHCalibrationPulseTimeCam"));
801	}
802
803	if (!WriteResult(addcont))
804	return kFALSE;
805
806
807	// return if job went ok
808	*fLog << all << GetDescriptor() << ": Done." << endl;
809	*fLog << endl << endl;
810
811	return kTRUE;
812	}
813
814
815	void MJCalibrateSignal::DisplayResult(MParList &plist)
816	{
817
818	if (!fDisplay)
819	return;
820
821	//
822	// Get container from list
823	//
824	MGeomCam &geomcam = (MGeomCam)plist.FindObject("MGeomCam");
825	MCalibrationPulseTimeCam pcam = (MCalibrationPulseTimeCam)plist.FindObject("MCalibrationPulseTimeCam");
826
827	MHCamera disp11 (geomcam, "PulseTime", "Mean pulse arrival time cosmics");
828	MHCamera disp21 (geomcam, "PulseTimeRMS", "RMS of pulse arrival time cosmics");
829
830	disp11.SetCamContent(*pcam, 0);
831	disp11.SetCamError( *pcam, 1);
832	disp21.SetCamContent(*pcam, 2);
833	disp21.SetCamError( *pcam, 3);
834
835	disp11.SetYTitle("T [FADC sl.]");
836	disp21.SetYTitle("T [FADC sl.]");
837
838	TCanvas &c0 = fDisplay->AddTab("PulseTime");
839	c0.Divide(2,3);
840
841	disp11.CamDraw(c0, 1, 2, 1);
842	disp21.CamDraw(c0, 2, 2, 1);
843
844
845	if (!fIsHiLoCalibration)
846	return;
847
848	MCalibrationHiLoCam hcam = (MCalibrationHiLoCam)plist.FindObject("MCalibrationHiLoCam");
849
850	// Create histograms to display
851	MHCamera disp1 (geomcam, "HiLoConv", "Ratio Amplification HiGain vs. LoGain (Charges)");
852	MHCamera disp2 (geomcam, "HiLoDiff", "Arrival Time Diff. HiGain vs. LoGain (Times)");
853
854	disp1.SetCamContent(*hcam, 0);
855	disp1.SetCamError( *hcam, 1);
856	disp2.SetCamContent(*hcam, 5);
857	disp2.SetCamError( *hcam, 6);
858
859	disp1.SetYTitle("R [1]");
860	disp2.SetYTitle("\\Delta T [FADC sl.]");
861
862
863	TCanvas &c1 = fDisplay->AddTab("HiLoConv");
864	c1.Divide(2,3);
865
866	disp1.CamDraw(c1, 1, 2, 1);
867	disp2.CamDraw(c1, 2, 2, 1);
868	}
869

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