source: trunk/MagicSoft/Mars/mjobs/MJCalibrateSignal.cc@ 8441

Last change on this file since 8441 was 8434, checked in by tbretz, 19 years ago
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1/* ======================================================================== *\
2!
3! *
4! * This file is part of MARS, the MAGIC Analysis and Reconstruction
5! * Software. It is distributed to you in the hope that it can be a useful
6! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
7! * It is distributed WITHOUT ANY WARRANTY.
8! *
9! * Permission to use, copy, modify and distribute this software and its
10! * documentation for any purpose is hereby granted without fee,
11! * provided that the above copyright notice appear in all copies and
12! * that both that copyright notice and this permission notice appear
13! * in supporting documentation. It is provided "as is" without express
14! * or implied warranty.
15! *
16!
17!
18! Author(s): Thomas Bretz, 1/2004 <mailto:tbretz@astro.uni-wuerzburg.de>
19!
20! Copyright: MAGIC Software Development, 2000-2007
21!
22!
23\* ======================================================================== */
24
25/////////////////////////////////////////////////////////////////////////////
26//
27// MJCalibrateSignal
28//
29// This class is reading the output written by callisto. It calibrates
30// signal and time.
31//
32// The signal and time extractors are read from the callisto-output. In
33// pricipal you could overwrite these default using the resource file,
34// but this is NOT recommended!
35//
36/////////////////////////////////////////////////////////////////////////////
37#include "MJCalibrateSignal.h"
38
39#include <TEnv.h>
40#include <TFile.h>
41
42#include "MLog.h"
43#include "MLogManip.h"
44
45#include "MDirIter.h"
46#include "MRunIter.h"
47#include "MParList.h"
48#include "MTaskList.h"
49#include "MEvtLoop.h"
50
51#include "MStatusDisplay.h"
52
53#include "MGeomCam.h"
54#include "MHCamEvent.h"
55#include "MPedestalCam.h"
56#include "MBadPixelsCam.h"
57#include "MArrivalTimeCam.h"
58
59#include "MCalibrationQECam.h"
60#include "MCalibrationBlindCam.h"
61#include "MCalibrationChargeCam.h"
62#include "MCalibrationRelTimeCam.h"
63#include "MCalibrationChargePINDiode.h"
64#include "MCalibrationPulseTimeCam.h"
65#include "MCalibrationPatternDecode.h"
66
67#include "MCalibrationChargeCalc.h"
68#include "MCalibrationRelTimeCalc.h"
69
70#include "MCalibConstCam.h"
71#include "MCalibrationIntensityChargeCam.h"
72
73#include "MHCalibrationChargeCam.h"
74#include "MHCalibrationChargeBlindCam.h"
75#include "MHCalibrationChargePINDiode.h"
76#include "MHCalibrationRelTimeCam.h"
77#include "MHCalibrationPulseTimeCam.h"
78#include "MHCamera.h"
79
80#include "MCalibCalcFromPast.h"
81
82#include "MReadMarsFile.h"
83#include "MRawFileRead.h"
84#include "MContinue.h"
85#include "MTriggerPatternDecode.h"
86#include "MFTriggerPattern.h"
87#include "MFDataPhrase.h"
88#include "MFilterList.h"
89#include "MGeomApply.h"
90#include "MPedestalSubtract.h"
91#include "MPointingPosCalc.h"
92#include "MPedCalcFromLoGain.h"
93#include "MPedestalSubtract.h"
94#include "MExtractor.h"
95#include "MExtractTimeAndCharge.h"
96#include "MExtractPINDiode.h"
97#include "MExtractBlindPixel.h"
98#include "MFCosmics.h"
99#include "MTaskEnv.h"
100#include "MCalibrateData.h"
101#include "MCalibrateRelTimes.h"
102#include "MBadPixelsCalc.h"
103#include "MBadPixelsTreat.h"
104#include "MFillH.h"
105#include "MWriteRootFile.h"
106
107#include "MFEvtNumber.h"
108#include "MMoviePrepare.h"
109#include "MMovieWrite.h"
110#include "MImgCleanStd.h"
111
112ClassImp(MJCalibrateSignal);
113
114using namespace std;
115
116// --------------------------------------------------------------------------
117//
118// Default constructor.
119//
120// Sets:
121// - fIsInterlaced to kTRUE
122// - fIsRelTimesUpdate to kFALSE
123// - fIsHiLoCalibration to kFALSE
124// - fPulsePosCheck to kTRUE
125//
126MJCalibrateSignal::MJCalibrateSignal(const char *name, const char *title)
127 : fExtractor(0), fIsInterlaced(kTRUE), fIsRelTimesUpdate(kFALSE), fIsMovieMode(kFALSE)
128{
129 fName = name ? name : "MJCalibrateSignal";
130 fTitle = title ? title : "Tool to calibrate data";
131
132 SetPulsePosCheck();
133 //fCruns = NULL;
134}
135
136MJCalibrateSignal::~MJCalibrateSignal()
137{
138 if (fExtractor)
139 delete fExtractor;
140}
141
142void MJCalibrateSignal::SetExtractor(const MExtractor *ext)
143{
144 if (fExtractor)
145 delete fExtractor;
146
147 fExtractor = ext ? (MExtractor*)ext->Clone() : NULL;
148}
149
150Bool_t MJCalibrateSignal::WriteResult(TObjArray &cont)
151{
152 if (IsNoStorage())
153 return kTRUE;
154
155 const TString name(Form("signal%08d.root", fSequence.GetSequence()));
156 return WriteContainer(cont, name);
157}
158
159Bool_t MJCalibrateSignal::ReadCalibration(TObjArray &l, MBadPixelsCam &cam, MExtractor* &ext2, MExtractor* &ext3, TString &geom) const
160{
161 TString fname = Form("%s/calib%08d.root", fPathIn.Data(), fSequence.GetSequence());
162
163 *fLog << inf << "Reading from file: " << fname << endl;
164
165 TFile file(fname, "READ");
166 if (!file.IsOpen())
167 {
168 *fLog << err << dbginf << "ERROR - Could not open file " << fname << endl;
169 return kFALSE;
170 }
171
172 TObject *o = file.Get("ExtractSignal");
173 if (o && !o->InheritsFrom(MExtractor::Class()))
174 {
175 *fLog << err << dbginf << "ERROR - ExtractSignal read from " << fname << " doesn't inherit from MExtractor!" << endl;
176 return kFALSE;
177 }
178 ext3 = o ? (MExtractor*)o->Clone() : NULL;
179
180 o = file.Get("ExtractTime");
181 if (o && !o->InheritsFrom(MExtractor::Class()))
182 {
183 *fLog << err << dbginf << "ERROR - ExtractTime read from " << fname << " doesn't inherit from MExtractor!" << endl;
184 return kFALSE;
185 }
186 ext2 = o ? (MExtractor*)o->Clone() : NULL;
187 if (!ext3 && !ext2)
188 {
189 *fLog << err << dbginf << "ERROR - Neither ExtractSignal nor ExrtractTime found in " << fname << "!" << endl;
190 return kFALSE;
191 }
192
193 o = file.Get("MGeomCam");
194 if (o && !o->InheritsFrom(MGeomCam::Class()))
195 {
196 *fLog << err << dbginf << "ERROR - MGeomCam read from " << fname << " doesn't inherit from MGeomCam!" << endl;
197 return kFALSE;
198 }
199 geom = o ? o->ClassName() : "";
200
201 TObjArray cont(l);
202 cont.Add(&cam);
203 return ReadContainer(cont);
204}
205
206// --------------------------------------------------------------------------
207//
208// MJCalibration allows to setup several option by a resource file:
209// MJCalibrateSignal.RawData: yes,no
210//
211// For more details see the class description and the corresponding Getters
212//
213Bool_t MJCalibrateSignal::CheckEnvLocal()
214{
215 SetInterlaced(GetEnv("Interlaced", fIsInterlaced));
216 SetRelTimesUpdate(GetEnv("RelTimesUpdate", fIsRelTimesUpdate));
217 SetMovieMode(GetEnv("MovieMode", fIsMovieMode));
218
219 return MJCalib::CheckEnvLocal();
220}
221
222Bool_t MJCalibrateSignal::Process(MPedestalCam &pedcamab, MPedestalCam &pedcambias,
223 MPedestalCam &pedcamextr)
224{
225 if (!fSequence.IsValid())
226 {
227 *fLog << err << "ERROR - Sequence invalid..." << endl;
228 return kFALSE;
229 }
230
231 *fLog << inf;
232 fLog->Separator(GetDescriptor());
233 *fLog << "Calculate calibrated data from Sequence #";
234 *fLog << fSequence.GetSequence() << endl << endl;
235
236
237 //if (!CheckEnv())
238 // return kFALSE;
239
240 CheckEnv();
241
242 // --------------------------------------------------------------------------------
243
244 MDirIter iter;
245 if (fSequence.IsValid())
246 {
247 if (fSequence.SetupDatRuns(iter, 0, !fSequence.IsMonteCarlo())<=0)
248 return kFALSE;
249 }
250
251 // Read File
252 MCalibrationIntensityChargeCam ichcam;
253
254 MHCalibrationChargeCam hchacam;
255 MHCalibrationChargeBlindCam hbndcam;
256 MHCalibrationChargePINDiode hpndiod;
257 MHCalibrationRelTimeCam hrelcam;
258 //MHCalibrationHiLoCam hilocam;
259 //MHCalibrationPulseTimeCam hpulcam;
260
261 hchacam.SetOscillations(kFALSE);
262 hbndcam.SetOscillations(kFALSE);
263 hrelcam.SetOscillations(kFALSE);
264
265 MCalibrationChargeCam calcam;
266 MCalibrationQECam qecam;
267 MCalibrationBlindCam bndcam;
268 MCalibrationChargePINDiode pind;
269 MCalibrationRelTimeCam tmcam;
270 //MCalibrationHiLoCam hilcam;
271 MCalibrationPulseTimeCam pulcam;
272
273 MBadPixelsCam badpix;
274
275 TObjArray interlacedcont;
276 if (fIsInterlaced)
277 {
278 interlacedcont.Add(&ichcam);
279 interlacedcont.Add(&hchacam);
280 if (IsUseBlindPixel())
281 interlacedcont.Add(&hbndcam);
282 if (IsUsePINDiode())
283 interlacedcont.Add(&hpndiod);
284 if (fIsRelTimesUpdate)
285 interlacedcont.Add(&hrelcam);
286 }
287
288 MExtractor *extractor1=fExtractor;
289 MExtractor *extractor2=0;
290 MExtractor *extractor3=0;
291 TString geom;
292
293 TObjArray calibcont;
294 calibcont.Add(&calcam);
295 calibcont.Add(&qecam);
296 calibcont.Add(&bndcam);
297 calibcont.Add(&tmcam);
298 if (IsUseBlindPixel())
299 calibcont.Add(&bndcam);
300
301 if (!ReadCalibration(calibcont, badpix, extractor2, extractor3, geom))
302 return kFALSE;
303
304 *fLog << all;
305 if (!geom.IsNull())
306 *fLog << inf << "Camera geometry found in file: " << geom << endl;
307 else
308 *fLog << inf << "No Camera geometry found using default <MGeomCamMagic>" << endl;
309
310 if (extractor3)
311 {
312 *fLog << underline << "Signal Extractor found in calibration file" << endl;
313 extractor3->Print();
314 *fLog << endl;
315 }
316 else
317 *fLog << inf << "No Signal Extractor: ExtractSignal in file." << endl;
318
319
320 if (extractor1)
321 {
322 *fLog << underline << "Modified Signal Extractor set by user." << endl;
323 extractor1->Print();
324 *fLog << endl;
325 }
326 else
327 {
328 *fLog << inf << "No modified Signal Extractor set by user... using ExtractSignal." << endl;
329 extractor1 = extractor3 ? (MExtractor*)extractor3->Clone() : 0;
330 }
331
332 if (extractor2)
333 {
334 *fLog << underline << "Time Extractor found in calibration file" << endl;
335 extractor2->Print();
336 *fLog << endl;
337 }
338 else
339 *fLog << inf << "No Time Extractor: ExtractTime in file." << endl;
340
341 // This is necessary for the case in which it is not in the files
342 MCalibConstCam constcam;
343
344 //MBadPixelsCam badcam;
345 constcam.SetBadPixels(&badpix);
346
347 // Setup Parlist
348 MParList plist;
349 plist.AddToList(this); // take care of fDisplay!
350 plist.AddToList(&badpix);
351 plist.AddToList(&constcam);
352 //plist.AddToList(&hilcam);
353 plist.AddToList(&calibcont); // Using AddToList(TObjArray *)
354 plist.AddToList(&interlacedcont); // Using AddToList(TObjArray *)
355 plist.AddToList(&pulcam);
356
357 // Setup Tasklist
358 MTaskList tlist;
359 plist.AddToList(&tlist);
360
361 MReadMarsFile readmc("Events");
362 readmc.DisableAutoScheme();
363
364 MRawFileRead rawread(NULL);
365
366 MRead *read = fSequence.IsMonteCarlo() ? (MRead*)&readmc : (MRead*)&rawread;
367 read->AddFiles(iter);
368
369 const TString fname(Form("%s{s/_D_/_Y_}{s/\\.raw$/.root}{s/\\.raw\\.gz$/.root}", fPathOut.Data()));
370
371 // Skips MC which have no contents. This are precisely the
372 // events which fullfilled the MC Lvl1 trigger and an
373 // arbitrary cut (typically at 50phe) to speed up simulation
374 MContinue contmc("MRawEvtData.GetNumPixels<0.5", "ContEmptyMC");
375
376 //MPointingPosInterpolate pextr;
377 //pextr.AddFiles(&iter);
378
379 MGeomApply apply; // Only necessary to create geometry
380 if (!geom.IsNull())
381 apply.SetGeometry(geom);
382 //MBadPixelsMerge merge(&badpix);
383
384 // Make sure that pedcamab has the correct name
385 pedcamab.SetName("MPedestalFundamental");
386 pedcamextr.SetName("MPedestalFromExtractorRndm");
387 pedcambias.SetName("MPedestalFromExtractor");
388 plist.AddToList(&pedcamextr);
389 plist.AddToList(&pedcambias);
390 plist.AddToList(&pedcamab);
391
392 MArrivalTimeCam timecam;
393 plist.AddToList(&timecam);
394
395 // Check for interleaved events
396 MCalibrationPatternDecode caldec;
397 MTriggerPatternDecode decode;
398
399 // This will make that for data with version less than 5, where
400 // trigger patterns were not yet correct, all the events in the real
401 // data file will be processed. In any case there are no interleaved
402 // calibration events in such data, so this is fine.
403 MFTriggerPattern ftp;
404 ftp.SetDefault(kTRUE);
405 // ftp.RequireCalibration();
406 ftp.DenyCalibration();
407 ftp.DenyPedestal();
408 // ftp.DenyPinDiode();
409 ftp.SetInverted();
410
411 // This will skip interleaved calibration events and pedestal events (if any)
412 // --> tlist2
413 MContinue conttp(&ftp, "ContTrigPattern");
414
415 // Create the pedestal subtracted raw-data
416 MPedestalSubtract pedsub;
417 pedsub.SetPedestalCam(&pedcamab);
418
419 // Do signal and pedestal calculation
420 MPedCalcFromLoGain pedlo1("MPedCalcFundamental");
421 pedlo1.SetPedestalUpdate(kTRUE);
422 pedlo1.SetNamePedestalCamOut("MPedestalFundamental");
423
424 MPedCalcFromLoGain pedlo2("MPedCalcWithExtractorRndm");
425 pedlo2.SetPedestalUpdate(kTRUE);
426 pedlo2.SetRandomCalculation(kTRUE);
427 pedlo2.SetNamePedestalCamIn("MPedestalFundamental");
428 pedlo2.SetNamePedestalCamOut("MPedestalFromExtractorRndm");
429
430 MPedCalcFromLoGain pedlo3("MPedCalcWithExtractor");
431 pedlo3.SetPedestalUpdate(kTRUE);
432 pedlo3.SetRandomCalculation(kFALSE);
433 pedlo3.SetNamePedestalCamIn("MPedestalFundamental");
434 pedlo3.SetNamePedestalCamOut("MPedestalFromExtractor");
435
436 if (!extractor1)
437 {
438 *fLog << err << "ERROR - extractor1 == NULL" << endl;
439 return kFALSE;
440 }
441
442 extractor1->SetPedestals(&pedcamab);
443
444 // Setup to use the hi-gain extraction window in the lo-gain
445 // range (the start of the lo-gain range is added automatically
446 // by MPedCalcFromLoGain)
447 //
448 // The window size of the extractor is not yet initialized,
449 // so we have to stick to the extraction range
450 //
451 // Even if we would like to use a range comparable to the
452 // hi-gain extraction we use the lo-gain range to make
453 // sure that exclusions (eg. due to switching noise)
454 // are correctly handled.
455 //
456 pedlo1.SetRangeFromExtractor(*extractor1);
457
458 if (extractor1->InheritsFrom("MExtractTimeAndCharge"))
459 {
460 pedlo2.SetExtractor((MExtractTimeAndCharge*)extractor1);
461 pedlo3.SetExtractor((MExtractTimeAndCharge*)extractor1);
462 }
463 else
464 {
465 pedlo2.SetRangeFromExtractor(*extractor1);
466 pedlo3.SetRangeFromExtractor(*extractor1);
467 }
468
469 if (extractor2)
470 extractor2->SetPedestals(&pedcamab);
471
472 if (extractor3)
473 extractor3->SetPedestals(&pedcamab);
474
475 //------------------------------
476 MFTriggerPattern ftp2;
477 ftp2.SetDefault(kTRUE);
478 ftp2.DenyCalibration();
479 if (!extractor1->HasLoGain())
480 ftp2.RequirePedestal();
481
482 pedlo1.SetFilter(&ftp2);
483 pedlo2.SetFilter(&ftp2);
484 pedlo3.SetFilter(&ftp2);
485
486 MContinue contftp2(&ftp2, "ContPedestal");
487 //------------------------------
488
489 MFCosmics fcosmics;
490 fcosmics.SetNamePedestalCam("MPedestalFundamental");
491 MContinue contcos(&fcosmics, "ContTrigEvts");
492 contcos.SetInverted();
493
494 //MMcPedestalCopy pcopy;
495 MTaskEnv taskenv1("ExtractSignal");
496 MTaskEnv taskenv2("ExtractTime");
497 MTaskEnv taskenv3("ExtractInterlaced");
498 taskenv1.SetDefault(extractor1);
499 taskenv2.SetDefault(extractor2);
500 taskenv3.SetDefault(extractor3);
501
502 MFilterList flistftp2("PedestalFilter");
503 flistftp2.SetInverted();
504 flistftp2.AddToList(&ftp2);
505
506 if (!extractor1->HasLoGain())
507 {
508 taskenv1.SetFilter(&flistftp2);
509 taskenv2.SetFilter(&flistftp2);
510 taskenv3.SetFilter(&flistftp2);
511 }
512
513 //
514 // This is new calibration to photo-electrons, hard-coded
515 // as decided at the Wuerzburg software meeting 26.01.05
516 //
517 MCalibrateData calib;
518 calib.SetSignalType(MCalibrateData::kPhe);
519 //calib.AddPedestal("Fundamental");
520 calib.AddPedestal("FromExtractor");
521 calib.AddPedestal("FromExtractorRndm");
522 calib.SetPedestalFlag(MCalibrateData::kEvent);
523 //----------------------------------------------------------
524
525 MExtractPINDiode pinext;
526 MExtractBlindPixel bldext;
527
528 MFTriggerPattern fcalib("CalibFilter");
529 fcalib.SetDefault(kFALSE);
530 fcalib.RequireCalibration();
531
532 MCalibrationChargeCalc chcalc;
533 chcalc.SetExtractor(extractor3);
534
535 MCalibrationRelTimeCalc recalc;
536 MCalibCalcFromPast pacalc;
537
538 pinext.SetPedestals(&pedcamab);
539 bldext.SetPedestals(&pedcamab);
540 chcalc.SetPedestals(&pedcamextr);
541
542 pacalc.SetChargeCalc(&chcalc);
543 if (fIsRelTimesUpdate)
544 pacalc.SetRelTimeCalc(&recalc);
545 pacalc.SetCalibrate(&calib);
546
547 //
548 // Intensity Calibration histogramming
549 //
550 MFillH filpin(&hpndiod, "MExtractedSignalPINDiode", "FillPINDiode");
551 MFillH filbnd(&hbndcam, "MExtractedSignalBlindPixel", "FillBlindCam");
552 MFillH filcam(&hchacam, "MExtractedSignalCam", "FillChargeCam");
553 MFillH filtme(&hrelcam, "MArrivalTimeCam", "FillRelTime");
554 //MFillH filhil(&hilocam, "MExtractedSignalCam", "FillHiLoRatio");
555 //MFillH filpul(&hpulcam, "MRawEvtData", "FillPulseTime");
556 filpin.SetBit(MFillH::kDoNotDisplay);
557 filbnd.SetBit(MFillH::kDoNotDisplay);
558 filcam.SetBit(MFillH::kDoNotDisplay);
559 filtme.SetBit(MFillH::kDoNotDisplay);
560 //filhil.SetBit(MFillH::kDoNotDisplay);
561 //filpul.SetBit(MFillH::kDoNotDisplay);
562
563 MCalibrateRelTimes caltm;
564 MBadPixelsCalc bpcal;
565 MBadPixelsTreat treat;
566
567 //bpcal.SetNamePedPhotCam("MPedPhotFromExtractor");
568 bpcal.SetNamePedPhotCam("MPedPhotFromExtractorRndm");
569
570 //treat.AddNamePedPhotCam("MPedPhotFundamental");
571 treat.AddNamePedPhotCam("MPedPhotFromExtractor");
572 treat.AddNamePedPhotCam("MPedPhotFromExtractorRndm");
573 if (!extractor2 && !extractor1->InheritsFrom("MExtractTimeAndCharge"))
574 treat.SetProcessTimes(kFALSE);
575
576 MHCamEvent evt0( 0, "PedFLG", "Fundamental Pedestal from Lo Gain;;P [cnts/sl]");
577 MHCamEvent evt1( 2, "PedRmsFLG", "RMS from Extractor applied to ped.;;\\sigma_{p} [cnts/sl]");
578 MHCamEvent evt2( 0, "Extra'd", "Extracted Signal;;S [cnts/sl]");
579 // MHCamEvent evt3(4, "PedPhot", "Calibrated Pedestal;;P [phe]");
580 MHCamEvent evt4( 5, "PedRMS", "Calibrated RMS from Extractor applied to ped.;;\\sigma_{p} [phe]");
581 MHCamEvent evt5( 0, "Interp'd", "Interpolated Signal scaled with A/A_{0};;S [phe]");
582 MHCamEvent evt6(102, "Unsuitable", "Fraction of unsuitable events per Pixel;;[1]");
583 // MHCamEvent evt7( 6, "Times", "Calibrated Arrival Time;;T [fadc sl]");
584 MHCamEvent evt8( 0, "Conv", "Calibration Conv. Factors;;[phe/cnts]");
585 MHCamEvent evt9( 7, "PulsePos", "Pulse Position of cosmics (>50phe);;T");
586 MHCamEvent evtR( 4, "HiLoCal", "Hi-/Lo-Gain ratio;;Ratio");
587 MHCamEvent evtO( 7, "HiLoOff", "Lo-/Hi-Gain Offset;;Offset");
588 evt2.SetErrorSpread(kFALSE);
589 evt5.SetErrorSpread(kFALSE);
590 evt6.SetErrorSpread(kFALSE);
591 evt6.SetThreshold();
592
593 MFillH fill0(&evt0, "MPedestalFundamental", "FillPedFLG");
594 MFillH fill1(&evt1, "MPedestalFromExtractorRndm", "FillPedRmsFLG");
595 MFillH fill2(&evt2, "MExtractedSignalCam", "FillExtracted");
596 // MFillH fill3(&evt3, "MPedPhotFundamental", "FillPedPhot");
597 MFillH fill4(&evt4, "MPedPhotFromExtractorRndm", "FillPedRMS");
598 MFillH fill5(&evt5, "MSignalCam", "FillInterpolated");
599 MFillH fill6(&evt6, "MBadPixelsCam", "FillUnsuitable");
600 // MFillH fill7(&evt7, "MSignalCam", "FillTimes");
601 MFillH fill8(&evt8, "MCalibConstCam", "FillConv");
602 MFillH fill9(&evt9, "MSignalCam", "FillPulse");
603 MFillH fillR(&evtR, "MExtractedSignalCam", "FillHiLoCal");
604 MFillH fillO(&evtO, "MArrivalTimeCam", "FillHiLoOff");
605
606 /*
607 MFillH fillP("MHPulseShape", "", "FillPulseShape");
608 fillP.SetNameTab("Pulse");
609 */
610
611 if (!extractor1->HasLoGain())
612 {
613 fill0.SetFilter(&ftp2);
614 fill1.SetFilter(&ftp2);
615 }
616
617 /*
618 MHVsTime hbadpix("MBadPixelsCam.GetNumUnsuitable");
619 hbadpix.SetNumEvents(50);
620 MFillH fillB(&hbadpix, "MTime");
621 */
622
623 MTaskEnv fillflorian("FinalFantasy");
624 fillflorian.SetDefault();
625
626 // The second rule is for the case reading raw-files!
627 MWriteRootFile write(2, fname, fOverwrite?"RECREATE":"NEW");
628 // Run Header
629 write.AddContainer("MRawRunHeader", "RunHeaders");
630 write.AddContainer("MBadPixelsCam", "RunHeaders");
631 write.AddContainer("MGeomCam", "RunHeaders");
632 // Monte Carlo Headers
633 write.AddContainer("MMcRunHeader", "RunHeaders", kFALSE);
634 write.AddContainer("MMcFadcHeader", "RunHeaders", kFALSE);
635 write.AddContainer("MMcTrigHeader", "RunHeaders", kFALSE);
636 write.AddContainer("MMcConfigRunHeader", "RunHeaders", kFALSE);
637 write.AddContainer("MMcCorsikaRunHeader", "RunHeaders", kFALSE);
638 // Monte Carlo
639 write.AddContainer("MMcEvt", "Events", kFALSE);
640 write.AddContainer("MMcTrig", "Events", kFALSE);
641 // Data tree
642 write.AddContainer("MSignalCam", "Events");
643 // write.AddContainer("MPedPhotFundamental", "Events");
644 write.AddContainer("MPedPhotFromExtractor", "Events");
645 write.AddContainer("MPedPhotFromExtractorRndm", "Events");
646 write.AddContainer("MTime", "Events", kFALSE);
647 write.AddContainer("MRawEvtHeader", "Events");
648
649 // Slow-Control: Current-tree
650 write.AddContainer("MTimeCurrents", "Currents", kFALSE);
651 write.AddContainer("MCameraDC", "Currents", kFALSE);
652 write.AddContainer("MReportCurrents", "Currents", kFALSE);
653 // Slow-Control: Camera-tree
654 write.AddContainer("MReportCamera", "Camera", kFALSE);
655 write.AddContainer("MTimeCamera", "Camera", kFALSE);
656 write.AddContainer("MCameraAUX", "Camera", kFALSE);
657 write.AddContainer("MCameraCalibration", "Camera", kFALSE);
658 write.AddContainer("MCameraCooling", "Camera", kFALSE);
659 write.AddContainer("MCameraHV", "Camera", kFALSE);
660 write.AddContainer("MCameraLV", "Camera", kFALSE);
661 write.AddContainer("MCameraLids", "Camera", kFALSE);
662 // Slow-Control: Trigger-tree
663 write.AddContainer("MReportTrigger", "Trigger", kFALSE);
664 write.AddContainer("MTimeTrigger", "Trigger", kFALSE);
665 // Slow-Control: Drive-tree
666 write.AddContainer("MReportDrive", "Drive", kFALSE);
667 write.AddContainer("MTimeDrive", "Drive", kFALSE);
668 // Slow-Control: Central Control-tree
669 write.AddContainer("MReportCC", "CC", kFALSE);
670 write.AddContainer("MTimeCC", "CC", kFALSE);
671
672 // Write the special MC tree
673 MWriteRootFile writemc(2, fname, fOverwrite?"RECREATE":"NEW");
674 writemc.SetName("WriteMC");
675 writemc.AddContainer("MMcEvtBasic", "OriginalMC");
676
677 // Now setup tasklist for events
678 MTaskList tlist2;
679
680 tlist2.AddToList(&caldec);
681 tlist2.AddToList(&decode);
682 tlist2.AddToList(&apply);
683 //tlist2.AddToList(&merge);
684 tlist2.AddToList(&pedsub);
685 tlist2.AddToList(&ftp2);
686 tlist2.AddToList(&pedlo1);
687 tlist2.AddToList(&pedlo2);
688 tlist2.AddToList(&pedlo3);
689 tlist2.AddToList(&fill0); // fill pedestal events
690 tlist2.AddToList(&fill1); // fill pedestal events
691
692 //-----------------------------------------------------------
693
694 MTaskList tlist3;
695 tlist3.SetFilter(&fcalib);
696
697 //MFDataPhrase filcalco("MCalibrationIntensityConstCam.IsReadyToSave>0.5", "CalibConstFilter");
698 if (fIsInterlaced)
699 {
700 tlist2.AddToList(&fcalib); // MFTriggerPattern
701 tlist2.AddToList(&tlist3);
702 if (IsUsePINDiode())
703 tlist3.AddToList(&pinext); // MExtractPINDiode
704 if (IsUseBlindPixel())
705 tlist3.AddToList(&bldext); // MExtractBlindPixel
706 tlist3.AddToList(&taskenv3);
707 tlist3.AddToList(&pacalc); // MCalibCalcFromPast
708 /*
709 tlist3.AddToList(&filcalco); // CalibConstFilter (IsReadyToSave)
710 fill8.SetFilter(&filcalco);
711 tlist3.AddToList(&fill8); // FillConvUpd
712 */
713
714 tlist3.AddToList(&filcam); // FillChargeCam
715 if (fIsRelTimesUpdate)
716 tlist3.AddToList(&filtme); // FillRelTime
717 if (IsUseBlindPixel())
718 tlist3.AddToList(&filbnd); // FillBlindCam
719 if (IsUsePINDiode())
720 tlist3.AddToList(&filpin); // FillPINDiode
721 tlist3.AddToList(&chcalc); // MCalibrationChargeCalc
722 if (fIsRelTimesUpdate)
723 tlist3.AddToList(&recalc); // MCalibrationRelTimeCam
724 }
725
726 // Continue for all non-cosmic events
727 if (!extractor1->HasLoGain())
728 tlist2.AddToList(&contftp2); // remove pedestal events from processing
729 tlist2.AddToList(&conttp); // remove calib events from processing
730 if (extractor1)
731 tlist2.AddToList(&taskenv1);
732 if (extractor2)
733 tlist2.AddToList(&taskenv2);
734 tlist2.AddToList(&contcos); // MFCosmics (ContTrigEvts)
735 /*
736 if (fIsHiLoCalibration)
737 {
738 plist.AddToList(&hilocam);
739 tlist2.AddToList(&filhil);
740 }
741
742 if (fIsPulsePosCheck)
743 {
744 plist.AddToList(&hpulcam);
745 tlist2.AddToList(&filpul);
746 }
747 */
748 tlist2.AddToList(&fill2);
749 tlist2.AddToList(&fill8); // FillConv
750 tlist2.AddToList(&calib); // MCalibrateData
751 if (extractor2 || extractor1->InheritsFrom("MExtractTimeAndCharge"))
752 tlist2.AddToList(&caltm);
753
754 tlist2.AddToList(&bpcal); // MBadPixelsCalc
755 tlist2.AddToList(&treat); // MBadPixelsTreat
756 tlist2.AddToList(&fill6);
757 // tlist2.AddToList(&fill3);
758 tlist2.AddToList(&fill4);
759 tlist2.AddToList(&fill5);
760 //if (extractor2 || extractor1->InheritsFrom("MExtractTimeAndCharge"))
761 // tlist2.AddToList(&fill7);
762 tlist2.AddToList(&fill9);
763 if (extractor1->HasLoGain())
764 {
765 tlist2.AddToList(&fillR);
766 tlist2.AddToList(&fillO);
767 }
768
769 /*
770 MFillH fillC("MHCleaning", "", "FillClean");
771 tlist2.AddToList(&fillC);
772
773 //tlist2.AddToList(&fillP);
774 */
775
776 // ----- Start: Code for encoding movies -----
777
778 MMoviePrepare movprep;
779 MMovieWrite movwrite;
780 movprep.SetRangeFromExtractor(*extractor1);
781
782 //MFDataPhrase movfilt("MMovieData.fMax>150");
783 MFDataPhrase movfilt("MMovieData.fMax>5*MMovieData.fMedianPedestalRms", "MovieFilter");
784
785 MImgCleanStd movclean(8.5, 4.0);
786 movclean.SetMethod(MImgCleanStd::kAbsolute);
787
788 //movprep.SetFilter(&evtnum);
789 movclean.SetFilter(&movfilt);
790 movwrite.SetFilter(&movfilt);
791
792 MTaskList tlistmov("MovieEncoder");
793 tlistmov.AddToList(&movprep);
794 tlistmov.AddToList(&movfilt);
795 tlistmov.AddToList(&movclean);
796 tlistmov.AddToList(&movwrite);
797
798 MFEvtNumber evtnum;
799 //evtnum.SetSelector("ThetaSquared.fVal<0.04");
800 //evtnum.SetFileName("ganymed00000001.root");
801 tlistmov.SetFilter(&evtnum);
802
803 if (fIsMovieMode)
804 {
805 tlist2.AddToList(&evtnum);
806 tlist2.AddToList(&tlistmov);
807 }
808
809 // ----- End: Code for encoding movies -----
810
811 tlist2.AddToList(&fillflorian);
812
813 // Setup List for Drive-tree
814 //MPointingPosCalc pcalc;
815
816 // Now setup main tasklist
817 tlist.AddToList(read);
818
819 if (fSequence.IsMonteCarlo())
820 {
821 if (!fIsMovieMode)
822 tlist.AddToList(&writemc);
823 tlist.AddToList(&contmc);
824 }
825
826 //if (IsUseRootData())
827 // tlist2.AddToList(&pextr);
828 tlist.AddToList(&tlist2, fSequence.IsMonteCarlo() ? "Events" : "Alls");
829
830 //if (fSequence.IsMonteCarlo())
831 // tlist.AddToList(&pcalc, "Drive");
832
833 if (!fIsMovieMode)
834 tlist.AddToList(&write);
835
836 // Create and setup the eventloop
837 MEvtLoop evtloop(fName);
838 evtloop.SetParList(&plist);
839 evtloop.SetDisplay(fDisplay);
840 evtloop.SetLogStream(fLog);
841 if (!SetupEnv(evtloop))
842 return kFALSE;
843
844 // Execute first analysis
845 const Bool_t rc = evtloop.Eventloop(fMaxEvents);
846
847 // make sure owned object are deleted
848 if (extractor1 && extractor1!=fExtractor)
849 delete extractor1;
850 if (extractor2)
851 delete extractor2;
852 if (extractor3)
853 delete extractor3;
854
855 // return if job failed
856 if (!rc)
857 {
858 *fLog << err << GetDescriptor() << ": Failed." << endl;
859 return kFALSE;
860 }
861
862 // if everything went ok write and display result
863 DisplayResult(plist);
864
865 /*
866 if (fIsPixelCheck)
867 {
868 if (fIsPulsePosCheck)
869 hpulcam[fCheckedPixId].DrawClone("");
870
871 //if (fIsHiLoCalibration)
872 // hilocam[fCheckedPixId].DrawClone("");
873 }
874 */
875 interlacedcont.Add(&pulcam);
876
877 //if (fIsHiLoCalibration)
878 // interlacedcont.Add(&hilcam);
879
880 //if (fIsPulsePosCheck)
881 // interlacedcont.Add(plist.FindObject("MHCalibrationPulseTimeCam"));
882
883 //if (fIsHiLoCalibration)
884 // interlacedcont.Add(plist.FindObject("MHCalibrationHiLoCam"));
885
886 if (!WriteResult(interlacedcont))
887 return kFALSE;
888
889 // return if job went ok
890 *fLog << all << GetDescriptor() << ": Done." << endl;
891 *fLog << endl << endl;
892
893 return kTRUE;
894}
895
896
897void MJCalibrateSignal::DisplayResult(MParList &plist)
898{
899 /*
900 if (!fDisplay || !fIsHiLoCalibration)
901 return;
902
903 MCalibrationHiLoCam *hcam = (MCalibrationHiLoCam*)plist.FindObject("MCalibrationHiLoCam");
904 MGeomCam *geom = (MGeomCam*)plist.FindObject("MGeomCam");
905 if (!hcam || !geom)
906 return;
907
908 // Create histograms to display
909 MHCamera disp1(*geom, "HiLoConv", "Ratio Amplification HiGain vs. LoGain (Charges)");
910 MHCamera disp2(*geom, "HiLoDiff", "Arrival Time Diff. HiGain vs. LoGain (Times)");
911
912 disp1.SetCamContent(*hcam, 0);
913 disp1.SetCamError( *hcam, 1);
914 disp2.SetCamContent(*hcam, 5);
915 disp2.SetCamError( *hcam, 6);
916
917 disp1.SetYTitle("R [1]");
918 disp2.SetYTitle("\\Delta T [FADC sl.]");
919
920 TCanvas &c1 = fDisplay->AddTab("HiLoConv");
921 c1.Divide(2,3);
922
923 disp1.CamDraw(c1, 1, 2, 1);
924 disp2.CamDraw(c1, 2, 2, 1);
925*/
926}
927
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