1 | /* ======================================================================== *\
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2 | !
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3 | ! *
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4 | ! * This file is part of MARS, the MAGIC Analysis and Reconstruction
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5 | ! * Software. It is distributed to you in the hope that it can be a useful
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6 | ! * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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7 | ! * It is distributed WITHOUT ANY WARRANTY.
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8 | ! *
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9 | ! * Permission to use, copy, modify and distribute this software and its
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10 | ! * documentation for any purpose is hereby granted without fee,
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11 | ! * provided that the above copyright notice appear in all copies and
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12 | ! * that both that copyright notice and this permission notice appear
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13 | ! * in supporting documentation. It is provided "as is" without express
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14 | ! * or implied warranty.
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15 | ! *
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16 | !
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17 | !
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18 | ! Author(s): Thomas Bretz, 1/2004 <mailto:tbretz@astro.uni-wuerzburg.de>
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19 | ! Author(s): Markus Gaug, 4/2004 <mailto:markus@ifae.es>
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20 | !
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21 | ! Copyright: MAGIC Software Development, 2000-2007
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22 | !
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23 | !
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24 | \* ======================================================================== */
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25 |
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26 | /////////////////////////////////////////////////////////////////////////////
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27 | //
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28 | // MJPedestal
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29 | //
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30 | // Resource file entries are case sensitive!
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31 | //
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32 | // We require at least fMinEvents (def=50) to be processed by the
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33 | // ExtractPedestal-task. If not an error is returned.
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34 | //
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35 | /////////////////////////////////////////////////////////////////////////////
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36 | #include "MJPedestal.h"
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37 |
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38 | // C/C++ includes
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39 | #include <fstream>
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40 |
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41 | // root classes
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42 | #include <TF1.h>
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43 | #include <TEnv.h>
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44 | #include <TFile.h>
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45 | #include <TLine.h>
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46 | #include <TLatex.h>
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47 | #include <TString.h>
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48 | #include <TCanvas.h>
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49 | #include <TSystem.h>
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50 | #include <TLegend.h>
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51 | #include <TPad.h>
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52 | #include <TEnv.h>
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53 | #include <TH2F.h>
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54 |
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55 | // mars core
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56 | #include "MLog.h"
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57 | #include "MLogManip.h"
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58 |
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59 | #include "MTaskEnv.h"
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60 | #include "MSequence.h"
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61 | #include "MRunIter.h"
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62 | #include "MParList.h"
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63 | #include "MTaskList.h"
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64 | #include "MEvtLoop.h"
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65 |
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66 | #include "MStatusDisplay.h"
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67 |
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68 | // Other basic classes
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69 | #include "MExtractTimeAndCharge.h"
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70 |
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71 | // parameter containers
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72 | #include "MGeomCam.h"
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73 | #include "MHCamera.h"
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74 | #include "MPedestalPix.h"
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75 |
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76 | #include "MCalibrationPix.h"
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77 | #include "MHPedestalPix.h"
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78 | #include "MHCalibrationPulseTimeCam.h"
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79 | #include "MCalibrationPulseTimeCam.h"
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80 |
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81 | // tasks
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82 | #include "MReadMarsFile.h"
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83 | #include "MRawFileRead.h"
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84 | #include "MRawEvtData.h"
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85 | #include "MGeomApply.h"
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86 | #include "MPedestalSubtract.h"
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87 | #include "MTriggerPatternDecode.h"
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88 | #include "MBadPixelsMerge.h"
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89 | #include "MFillH.h"
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90 | #include "MPedCalcPedRun.h"
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91 | #include "MPedCalcFromLoGain.h"
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92 | #include "MFTriggerPattern.h"
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93 | #include "MBadPixelsCalc.h"
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94 |
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95 | #include "MPedPhotCam.h"
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96 | #include "MPedPhotPix.h"
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97 | #include "MPedestalCam.h"
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98 | #include "MPedestalPix.h"
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99 | #include "MPedestalSubtract.h"
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100 |
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101 | ClassImp(MJPedestal);
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102 |
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103 | using namespace std;
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104 |
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105 | const TString MJPedestal::fgReferenceFile = "mjobs/pedestalref.rc";
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106 | const TString MJPedestal::fgBadPixelsFile = "mjobs/badpixels_0_559.rc";
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107 | const Float_t MJPedestal::fgExtractWinLeft = 0;
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108 | const Float_t MJPedestal::fgExtractWinRight = 0;
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109 |
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110 | // --------------------------------------------------------------------------
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111 | //
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112 | // Default constructor.
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113 | //
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114 | // Sets:
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115 | // - fExtractor to NULL,
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116 | // - fExtractType to kUsePedRun
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117 | // - fStorage to Normal Storage
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118 | // - fExtractorResolution to kFALSE
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119 | //
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120 | MJPedestal::MJPedestal(const char *name, const char *title)
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121 | : fExtractor(NULL), fDisplayType(kDisplayDataCheck),
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122 | fExtractType(kUsePedRun), fExtractionType(kFundamental),
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123 | fIsUseHists(kFALSE), fDeadPixelCheck(kFALSE), fMinEvents(50)
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124 | {
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125 | fName = name ? name : "MJPedestal";
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126 | fTitle = title ? title : "Tool to create a pedestal file (MPedestalCam)";
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127 |
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128 | SetUsePedRun();
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129 | SetPathIn("");
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130 | SetReferenceFile();
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131 | SetBadPixelsFile();
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132 |
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133 | SetExtractWinLeft();
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134 | SetExtractWinRight();
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135 | //
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136 | // Default references for case that no value references file is there
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137 | // (should not occur)
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138 | //
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139 |
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140 | fPedestalMin = 4.;
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141 | fPedestalMax = 16.;
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142 | fPedRmsMin = 0.;
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143 | fPedRmsMax = 20.;
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144 | fRefPedClosedLids = 9.635;
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145 | fRefPedExtraGalactic = 9.93;
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146 | fRefPedGalactic = 10.03;
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147 | fRefPedRmsClosedLidsInner = 1.7;
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148 | fRefPedRmsExtraGalacticInner = 5.6;
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149 | fRefPedRmsGalacticInner = 6.92;
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150 | fRefPedRmsClosedLidsOuter = 1.7;
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151 | fRefPedRmsExtraGalacticOuter = 3.35;
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152 | fRefPedRmsGalacticOuter = 4.2;
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153 | }
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154 |
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155 | MJPedestal::~MJPedestal()
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156 | {
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157 | if (fExtractor)
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158 | delete fExtractor;
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159 | }
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160 |
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161 | const char* MJPedestal::GetOutputFileName() const
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162 | {
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163 | return Form("pedest%08d.root", fSequence.GetSequence());
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164 | }
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165 |
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166 | MExtractor *MJPedestal::ReadCalibration()
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167 | {
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168 | const TString fname = Form("%s/calib%08d.root", fPathIn.Data(), fSequence.GetSequence());
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169 |
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170 | *fLog << inf << "Reading extractor from file: " << fname << endl;
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171 |
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172 | TFile file(fname, "READ");
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173 | if (!file.IsOpen())
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174 | {
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175 | *fLog << err << dbginf << "ERROR - Could not open file " << fname << endl;
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176 | return NULL;
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177 | }
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178 |
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179 | if (file.FindKey("MBadPixelsCam"))
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180 | {
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181 | MBadPixelsCam bad;
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182 | if (bad.Read()<=0)
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183 | *fLog << warn << "Unable to read MBadPixelsCam from " << fname << endl;
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184 | else
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185 | fBadPixels.Merge(bad);
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186 | }
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187 |
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188 | if (fExtractor)
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189 | return fExtractor;
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190 |
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191 | TObject *o=0;
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192 | o = file.Get("ExtractSignal");
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193 | if (o && !o->InheritsFrom(MExtractor::Class()))
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194 | {
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195 | *fLog << err << dbginf << "ERROR - ExtractSignal read from " << fname << " doesn't inherit from MExtractor!" << endl;
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196 | return NULL;
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197 | }
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198 | return o ? (MExtractor*)o->Clone("ExtractSignal") : NULL;
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199 | }
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200 |
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201 | //---------------------------------------------------------------------------------
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202 | //
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203 | // Display the results.
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204 | // If Display type "kDataCheck" was chosen, also the reference lines are displayed.
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205 | //
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206 | void MJPedestal::DisplayResult(const MParList &plist)
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207 | {
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208 | if (!fDisplay)
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209 | return;
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210 |
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211 | //
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212 | // Update display
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213 | //
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214 | TString title = fDisplay->GetTitle();
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215 | title += "-- Pedestal ";
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216 | title += fSequence.GetFileName();
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217 | title += " --";
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218 | fDisplay->SetTitle(title);
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219 |
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220 | //
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221 | // Get container from list
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222 | //
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223 | MGeomCam &geomcam = *(MGeomCam*)plist.FindObject("MGeomCam");
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224 | // MCalibrationPedCam &calpedcam = *(MCalibrationPedCam*)plist.FindObject("MCalibrationPedCam");
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225 |
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226 | //
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227 | // Create container to display
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228 | //
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229 | MHCamera disp0 (geomcam, "MPedestalCam;ped", "Mean Pedestal");
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230 | MHCamera disp1 (geomcam, "MPedestalCam;RMS", "Pedestal RMS");
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231 | MHCamera disp2 (geomcam, "MCalibPedCam;histmean", "Mean Pedestal (Hist.)");
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232 | MHCamera disp3 (geomcam, "MCalibPedCam;histsigma", "Pedestal RMS (Hist.)");
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233 | MHCamera disp4 (geomcam, "MCalibPedCam;ped", "Mean Pedestal");
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234 | MHCamera disp5 (geomcam, "MCalibPedCam;RMS", "Pedestal RMS");
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235 | MHCamera disp6 (geomcam, "MCalibDiffCam;ped", "Diff. Mean Pedestal (Hist.)");
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236 | MHCamera disp7 (geomcam, "MCalibDiffCam;RMS", "Diff. Pedestal RMS (Hist.)");
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237 | MHCamera disp8 (geomcam, "MCalibDiffCam;ped", "Diff. Mean Pedestal");
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238 | MHCamera disp9 (geomcam, "MCalibDiffCam;AbsRMS", "Diff. Abs. Pedestal RMS");
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239 | MHCamera disp10(geomcam, "MCalibDiffCam;RelRMS", "Diff. Rel. Pedestal RMS");
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240 |
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241 | disp0.SetCamContent(fPedestalCamOut, 0);
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242 | disp0.SetCamError (fPedestalCamOut, 1);
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243 |
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244 | disp1.SetCamContent(fPedestalCamOut, 2);
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245 | disp1.SetCamError (fPedestalCamOut, 3);
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246 |
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247 | /*
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248 | if (fIsUseHists)
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249 | {
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250 | disp2.SetCamContent(calpedcam, 0);
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251 | disp2.SetCamError (calpedcam, 1);
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252 |
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253 | disp3.SetCamContent(calpedcam, 2);
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254 | disp3.SetCamError (calpedcam, 3);
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255 |
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256 | disp4.SetCamContent(calpedcam, 5);
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257 | disp4.SetCamError (calpedcam, 6);
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258 |
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259 | disp5.SetCamContent(calpedcam, 7);
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260 | disp5.SetCamError (calpedcam, 8);
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261 |
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262 | for (UInt_t i=0;i<geomcam.GetNumPixels();i++)
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263 | {
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264 |
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265 | MPedestalPix &ped = fPedestalCamOut[i];
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266 | MCalibrationPix &hist = calpedcam [i];
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267 | MBadPixelsPix &bad = fBadPixels[i];
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268 |
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269 | if (bad.IsUnsuitable())
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270 | continue;
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271 |
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272 | disp6.Fill(i,ped.GetPedestal()-hist.GetHiGainMean());
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273 | disp6.SetUsed(i);
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274 |
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275 | disp7.Fill(i,hist.GetHiGainSigma()-ped.GetPedestalRms());
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276 | if (TMath::Abs(ped.GetPedestalRms()-hist.GetHiGainSigma()) < 4.0)
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277 | disp7.SetUsed(i);
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278 |
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279 | disp8.Fill(i,ped.GetPedestal()-hist.GetLoGainMean());
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280 | disp8.SetUsed(i);
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281 |
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282 | disp9.Fill(i,hist.GetLoGainSigma()-ped.GetPedestalRms());
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283 | if (TMath::Abs(hist.GetLoGainSigma() - ped.GetPedestalRms()) < 4.0)
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284 | disp9.SetUsed(i);
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285 | }
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286 | }
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287 | */
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288 |
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289 | if (fExtractionType!=kFundamental/*fExtractorResolution*/)
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290 | {
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291 | for (UInt_t i=0;i<geomcam.GetNumPixels();i++)
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292 | {
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293 |
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294 | MPedestalPix &pedo = fPedestalCamOut[i];
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295 | MPedestalPix &pedi = fPedestalCamIn[i];
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296 | MBadPixelsPix &bad = fBadPixels[i];
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297 |
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298 | if (bad.IsUnsuitable())
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299 | continue;
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300 |
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301 | const Float_t diff = pedo.GetPedestalRms()-pedi.GetPedestalRms();
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302 | const Float_t sum = 0.5*(pedo.GetPedestalRms()+pedi.GetPedestalRms());
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303 |
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304 | disp9.Fill(i,pedo.GetPedestalRms()-pedi.GetPedestalRms());
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305 | if (pedo.IsValid() && pedi.IsValid())
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306 | disp9.SetUsed(i);
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307 |
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308 | disp10.Fill(i,sum == 0. ? 0. : diff/sum);
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309 | if (pedo.IsValid() && pedi.IsValid() && sum != 0.)
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310 | disp10.SetUsed(i);
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311 | }
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312 | }
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313 |
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314 | disp0.SetYTitle("P [cts/slice]");
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315 | disp1.SetYTitle("P_{rms} [cts/slice]");
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316 | disp2.SetYTitle("Hist. Mean [cts/slice]");
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317 | disp3.SetYTitle("Hist. Sigma [cts/slice]");
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318 | disp4.SetYTitle("Calc. Mean [cts/slice]");
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319 | disp5.SetYTitle("Calc. RMS [cts/slice]");
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320 | disp6.SetYTitle("Diff. Mean [cts/slice]");
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321 | disp7.SetYTitle("Diff. RMS [cts/slice]");
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322 | disp8.SetYTitle("Diff. Mean [cts/slice]");
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323 | disp9.SetYTitle("Abs.Diff.RMS [cts/slice]");
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324 | disp10.SetYTitle("Rel.Diff.RMS [1]");
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325 |
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326 | //
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327 | // Display data
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328 | //
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329 | if (fDisplayType != kDisplayDataCheck && fExtractionType==kFundamental/*fExtractorResolution*/)
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330 | {
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331 | TCanvas &c3 = fDisplay->AddTab("Pedestals");
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332 | c3.Divide(2,3);
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333 |
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334 | disp0.CamDraw(c3, 1, 2, 1);
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335 | disp1.CamDraw(c3, 2, 2, 6);
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336 | return;
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337 | }
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338 |
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339 | #if 0
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340 | if (fIsUseHists)
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341 | {
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342 |
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343 | TCanvas &c3 = fDisplay->AddTab("Extractor Hist.");
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344 | c3.Divide(2,3);
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345 |
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346 | disp2.CamDraw(c3, 1, 2, 1);
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347 | disp3.CamDraw(c3, 2, 2, 5);
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348 |
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349 | TCanvas &c4 = fDisplay->AddTab("Extractor Calc.");
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350 | c4.Divide(2,3);
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351 |
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352 | disp4.CamDraw(c4, 1, 2, 1);
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353 | disp5.CamDraw(c4, 2, 2, 5);
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354 |
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355 | /*
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356 | TCanvas &c5 = fDisplay->AddTab("Difference Hist.");
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357 | c5.Divide(2,3);
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358 |
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359 | disp6.CamDraw(c5, 1, 2, 1);
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360 | disp7.CamDraw(c5, 2, 2, 5);
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361 | */
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362 |
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363 | TCanvas &c6 = fDisplay->AddTab("Difference Calc.");
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364 | c6.Divide(2,3);
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365 |
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366 | disp8.CamDraw(c6, 1, 2, 1);
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367 | disp9.CamDraw(c6, 2, 2, 5);
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368 | return;
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369 | }
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370 | #endif
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371 | if (fDisplayType == kDisplayDataCheck)
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372 | {
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373 |
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374 | TCanvas &c3 = fDisplay->AddTab(fExtractionType!=kFundamental/*fExtractorResolution*/ ? "PedExtrd" : "Ped");
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375 | c3.Divide(2,3);
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376 |
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377 | c3.cd(1);
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378 | gPad->SetBorderMode(0);
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379 | gPad->SetTicks();
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380 | MHCamera *obj1=(MHCamera*)disp0.DrawCopy("hist");
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381 | //
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382 | // for the datacheck, fix the ranges!!
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383 | //
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384 | if (fExtractionType==kFundamental/*!fExtractorResolution*/)
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385 | {
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386 | obj1->SetMinimum(fPedestalMin);
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387 | obj1->SetMaximum(fPedestalMax);
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388 | }
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389 | //
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390 | // Set the datacheck sizes:
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391 | //
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392 | FixDataCheckHist((TH1D*)obj1);
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393 | //
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394 | // set reference lines
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395 | //
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396 | DisplayReferenceLines(obj1,0);
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397 | //
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398 | // end reference lines
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399 | //
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400 | c3.cd(3);
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401 | gPad->SetBorderMode(0);
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402 | obj1->SetPrettyPalette();
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403 | obj1->Draw();
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404 |
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405 | c3.cd(5);
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406 | gPad->SetBorderMode(0);
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407 | gPad->SetTicks();
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408 | TH1D *obj2 = (TH1D*)obj1->Projection(obj1->GetName());
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409 | obj2->Draw();
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410 | obj2->SetBit(kCanDelete);
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411 | obj2->Fit("gaus","Q");
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412 | obj2->GetFunction("gaus")->SetLineColor(kYellow);
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413 | //
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414 | // Set the datacheck sizes:
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415 | //
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416 | FixDataCheckHist(obj2);
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417 | obj2->SetStats(1);
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418 |
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419 | c3.cd(2);
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420 | gPad->SetBorderMode(0);
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421 | gPad->SetTicks();
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422 | MHCamera *obj3=(MHCamera*)disp1.DrawCopy("hist");
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423 | //
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424 | // for the datacheck, fix the ranges!!
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425 | //
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426 | obj3->SetMinimum(fPedRmsMin);
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427 | obj3->SetMaximum(fPedRmsMax);
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428 | //
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429 | // Set the datacheck sizes:
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430 | //
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431 | FixDataCheckHist((TH1D*)obj3);
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432 | //
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433 | // set reference lines
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434 | //
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435 | DisplayReferenceLines(obj3,1);
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436 |
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437 | c3.cd(4);
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438 | gPad->SetBorderMode(0);
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439 | obj3->SetPrettyPalette();
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440 | obj3->Draw();
|
---|
441 |
|
---|
442 | c3.cd(6);
|
---|
443 | gPad->SetBorderMode(0);
|
---|
444 |
|
---|
445 | if (geomcam.InheritsFrom("MGeomCamMagic"))
|
---|
446 | {
|
---|
447 | TArrayI inner(1);
|
---|
448 | inner[0] = 0;
|
---|
449 |
|
---|
450 | TArrayI outer(1);
|
---|
451 | outer[0] = 1;
|
---|
452 |
|
---|
453 | TArrayI s0(6);
|
---|
454 | s0[0] = 6;
|
---|
455 | s0[1] = 1;
|
---|
456 | s0[2] = 2;
|
---|
457 | s0[3] = 3;
|
---|
458 | s0[4] = 4;
|
---|
459 | s0[5] = 5;
|
---|
460 |
|
---|
461 | TArrayI s1(3);
|
---|
462 | s1[0] = 6;
|
---|
463 | s1[1] = 1;
|
---|
464 | s1[2] = 2;
|
---|
465 |
|
---|
466 | TArrayI s2(3);
|
---|
467 | s2[0] = 3;
|
---|
468 | s2[1] = 4;
|
---|
469 | s2[2] = 5;
|
---|
470 |
|
---|
471 | TVirtualPad *pad = gPad;
|
---|
472 | pad->Divide(2,1);
|
---|
473 |
|
---|
474 | TH1D *inout[2];
|
---|
475 | inout[0] = disp1.ProjectionS(s0, inner, "Inner");
|
---|
476 | inout[1] = disp1.ProjectionS(s0, outer, "Outer");
|
---|
477 | FixDataCheckHist(inout[0]);
|
---|
478 | FixDataCheckHist(inout[1]);
|
---|
479 |
|
---|
480 | inout[0]->SetTitle(Form("%s %s",disp1.GetTitle(),"Inner"));
|
---|
481 | inout[1]->SetTitle(Form("%s %s",disp1.GetTitle(),"Outer"));
|
---|
482 |
|
---|
483 |
|
---|
484 | for (int i=0; i<2; i++)
|
---|
485 | {
|
---|
486 | pad->cd(i+1);
|
---|
487 | gPad->SetBorderMode(0);
|
---|
488 | gPad->SetTicks();
|
---|
489 |
|
---|
490 | inout[i]->SetDirectory(NULL);
|
---|
491 | inout[i]->SetLineColor(kRed+i);
|
---|
492 | inout[i]->SetBit(kCanDelete);
|
---|
493 | inout[i]->Draw();
|
---|
494 | inout[i]->Fit("gaus", "Q");
|
---|
495 |
|
---|
496 | TLegend *leg2 = new TLegend(0.6,0.2,0.9,0.55);
|
---|
497 | leg2->SetHeader(inout[i]->GetName());
|
---|
498 | leg2->AddEntry(inout[i], inout[i]->GetName(), "l");
|
---|
499 |
|
---|
500 | //
|
---|
501 | // Display the outliers as dead and noisy pixels
|
---|
502 | //
|
---|
503 | DisplayOutliers(inout[i]);
|
---|
504 |
|
---|
505 | //
|
---|
506 | // Display the two half of the camera separately
|
---|
507 | //
|
---|
508 | TH1D *half[2];
|
---|
509 | half[0] = disp1.ProjectionS(s1, i==0 ? inner : outer , "Sector 6-1-2");
|
---|
510 | half[1] = disp1.ProjectionS(s2, i==0 ? inner : outer , "Sector 3-4-5");
|
---|
511 |
|
---|
512 | for (int j=0; j<2; j++)
|
---|
513 | {
|
---|
514 | half[j]->SetLineColor(kRed+i+2*j+1);
|
---|
515 | half[j]->SetDirectory(NULL);
|
---|
516 | half[j]->SetBit(kCanDelete);
|
---|
517 | half[j]->Draw("same");
|
---|
518 | leg2->AddEntry(half[j], half[j]->GetName(), "l");
|
---|
519 | }
|
---|
520 | leg2->Draw();
|
---|
521 | delete leg2;
|
---|
522 | }
|
---|
523 | return;
|
---|
524 | }
|
---|
525 | }
|
---|
526 |
|
---|
527 | if (fExtractionType!=kFundamental/*fExtractorResolution*/)
|
---|
528 | {
|
---|
529 |
|
---|
530 | TCanvas &c3 = fDisplay->AddTab(fExtractionType==kWithExtractor?"PedExtrd":"PedRndm");
|
---|
531 | c3.Divide(2,3);
|
---|
532 |
|
---|
533 | disp0.CamDraw(c3, 1, 2, 1);
|
---|
534 | disp1.CamDraw(c3, 2, 2, 6);
|
---|
535 |
|
---|
536 | TCanvas &c13 = fDisplay->AddTab(fExtractionType==kWithExtractor?"DiffExtrd":"DiffRndm");
|
---|
537 | c13.Divide(2,3);
|
---|
538 |
|
---|
539 | disp9.CamDraw(c13, 1, 2, 5);
|
---|
540 | disp10.CamDraw(c13, 2, 2, 5);
|
---|
541 | return;
|
---|
542 | }
|
---|
543 | }
|
---|
544 |
|
---|
545 |
|
---|
546 | void MJPedestal::DisplayReferenceLines(MHCamera *cam, const Int_t what) const
|
---|
547 | {
|
---|
548 |
|
---|
549 | Double_t x = cam->GetNbinsX();
|
---|
550 |
|
---|
551 | const MGeomCam *geom = cam->GetGeometry();
|
---|
552 |
|
---|
553 | if (geom->InheritsFrom("MGeomCamMagic"))
|
---|
554 | x = what ? 397 : cam->GetNbinsX();
|
---|
555 |
|
---|
556 | TLine line;
|
---|
557 | line.SetLineStyle(kDashed);
|
---|
558 | line.SetLineWidth(3);
|
---|
559 | line.SetLineColor(kBlue);
|
---|
560 |
|
---|
561 | TLegend *leg = new TLegend(0.6,0.75,0.9,0.99);
|
---|
562 | leg->SetBit(kCanDelete);
|
---|
563 |
|
---|
564 | if (fExtractionType==kWithExtractorRndm && !(what))
|
---|
565 | {
|
---|
566 | TLine *l0 = line.DrawLine(0,0.,cam->GetNbinsX(),0.);
|
---|
567 | l0->SetBit(kCanDelete);
|
---|
568 | leg->AddEntry(l0, "Reference","l");
|
---|
569 | leg->Draw();
|
---|
570 | return;
|
---|
571 | }
|
---|
572 |
|
---|
573 | line.SetLineColor(kBlue);
|
---|
574 | TLine *l1 = line.DrawLine(0, what ? fRefPedRmsGalacticInner : fRefPedGalactic,
|
---|
575 | x, what ? fRefPedRmsGalacticInner : fRefPedGalactic);
|
---|
576 | l1->SetBit(kCanDelete);
|
---|
577 | line.SetLineColor(kYellow);
|
---|
578 | TLine *l2 = line.DrawLine(0, what ? fRefPedRmsExtraGalacticInner : fRefPedExtraGalactic,
|
---|
579 | x, what ? fRefPedRmsExtraGalacticInner : fRefPedExtraGalactic);
|
---|
580 | l2->SetBit(kCanDelete);
|
---|
581 | line.SetLineColor(kMagenta);
|
---|
582 | TLine *l3 = line.DrawLine(0, what ? fRefPedRmsClosedLidsInner : fRefPedClosedLids,
|
---|
583 | x, what ? fRefPedRmsClosedLidsInner : fRefPedClosedLids);
|
---|
584 | l3->SetBit(kCanDelete);
|
---|
585 |
|
---|
586 | if (geom->InheritsFrom("MGeomCamMagic"))
|
---|
587 | if (what)
|
---|
588 | {
|
---|
589 | const Double_t x2 = cam->GetNbinsX();
|
---|
590 |
|
---|
591 | line.SetLineColor(kBlue);
|
---|
592 | line.DrawLine(398, fRefPedRmsGalacticOuter,
|
---|
593 | x2, fRefPedRmsGalacticOuter);
|
---|
594 |
|
---|
595 | line.SetLineColor(kYellow);
|
---|
596 | line.DrawLine(398, fRefPedRmsExtraGalacticOuter,
|
---|
597 | x2, fRefPedRmsExtraGalacticOuter);
|
---|
598 |
|
---|
599 | line.SetLineColor(kMagenta);
|
---|
600 | line.DrawLine(398, fRefPedRmsClosedLidsOuter,
|
---|
601 | x2, fRefPedRmsClosedLidsOuter);
|
---|
602 | }
|
---|
603 |
|
---|
604 |
|
---|
605 | leg->AddEntry(l1, "Galactic Source","l");
|
---|
606 | leg->AddEntry(l2, "Extra-Galactic Source","l");
|
---|
607 | leg->AddEntry(l3, "Closed Lids","l");
|
---|
608 | leg->Draw();
|
---|
609 | }
|
---|
610 |
|
---|
611 | void MJPedestal::DisplayOutliers(TH1D *hist) const
|
---|
612 | {
|
---|
613 | const Float_t mean = hist->GetFunction("gaus")->GetParameter(1);
|
---|
614 | const Float_t lolim = mean - 3.5*hist->GetFunction("gaus")->GetParameter(2);
|
---|
615 | const Float_t uplim = mean + 3.5*hist->GetFunction("gaus")->GetParameter(2);
|
---|
616 | const Stat_t dead = hist->Integral(0,hist->FindBin(lolim)-1);
|
---|
617 | const Stat_t noisy = hist->Integral(hist->FindBin(uplim)+1,hist->GetNbinsX()+1);
|
---|
618 |
|
---|
619 | TLatex deadtex;
|
---|
620 | deadtex.SetTextSize(0.06);
|
---|
621 | deadtex.DrawLatex(0.1,hist->GetBinContent(hist->GetMaximumBin())/1.1,Form("%3i dead pixels",(Int_t)dead));
|
---|
622 |
|
---|
623 | TLatex noisytex;
|
---|
624 | noisytex.SetTextSize(0.06);
|
---|
625 | noisytex.DrawLatex(0.1,hist->GetBinContent(hist->GetMaximumBin())/1.2,Form("%3i noisy pixels",(Int_t)noisy));
|
---|
626 | }
|
---|
627 |
|
---|
628 | void MJPedestal::FixDataCheckHist(TH1D *hist) const
|
---|
629 | {
|
---|
630 | hist->SetDirectory(NULL);
|
---|
631 | hist->SetStats(0);
|
---|
632 |
|
---|
633 | //
|
---|
634 | // set the labels bigger
|
---|
635 | //
|
---|
636 | TAxis *xaxe = hist->GetXaxis();
|
---|
637 | TAxis *yaxe = hist->GetYaxis();
|
---|
638 |
|
---|
639 | xaxe->CenterTitle();
|
---|
640 | yaxe->CenterTitle();
|
---|
641 | xaxe->SetTitleSize(0.06);
|
---|
642 | yaxe->SetTitleSize(0.06);
|
---|
643 | xaxe->SetTitleOffset(0.8);
|
---|
644 | yaxe->SetTitleOffset(0.5);
|
---|
645 | xaxe->SetLabelSize(0.05);
|
---|
646 | yaxe->SetLabelSize(0.05);
|
---|
647 | }
|
---|
648 |
|
---|
649 | /*
|
---|
650 | Bool_t MJPedestal::WriteEventloop(MEvtLoop &evtloop) const
|
---|
651 | {
|
---|
652 | if (fOutputPath.IsNull())
|
---|
653 | return kTRUE;
|
---|
654 |
|
---|
655 | const TString oname(GetOutputFile());
|
---|
656 |
|
---|
657 | *fLog << inf << "Writing to file: " << oname << endl;
|
---|
658 |
|
---|
659 | TFile file(oname, fOverwrite?"RECREATE":"NEW", "File created by MJPedestal", 9);
|
---|
660 | if (!file.IsOpen())
|
---|
661 | {
|
---|
662 | *fLog << err << "ERROR - Couldn't open file " << oname << " for writing..." << endl;
|
---|
663 | return kFALSE;
|
---|
664 | }
|
---|
665 |
|
---|
666 | if (evtloop.Write(fName)<=0)
|
---|
667 | {
|
---|
668 | *fLog << err << "Unable to write MEvtloop to " << oname << endl;
|
---|
669 | return kFALSE;
|
---|
670 | }
|
---|
671 |
|
---|
672 | return kTRUE;
|
---|
673 | }
|
---|
674 | */
|
---|
675 |
|
---|
676 | void MJPedestal::SetExtractor(MExtractor* ext)
|
---|
677 | {
|
---|
678 | if (ext)
|
---|
679 | {
|
---|
680 | if (fExtractor)
|
---|
681 | delete fExtractor;
|
---|
682 | fExtractor = ext ? (MExtractor*)ext->Clone(ext->GetName()) : NULL;
|
---|
683 | }
|
---|
684 | else
|
---|
685 | fExtractor = 0;
|
---|
686 | }
|
---|
687 |
|
---|
688 | // --------------------------------------------------------------------------
|
---|
689 | //
|
---|
690 | // Read the following values from resource file:
|
---|
691 | //
|
---|
692 | // PedestalMin
|
---|
693 | // PedestalMax
|
---|
694 | //
|
---|
695 | // PedRmsMin
|
---|
696 | // PedRmsMax
|
---|
697 | //
|
---|
698 | // RefPedClosedLids
|
---|
699 | // RefPedExtraGalactic
|
---|
700 | // RefPedGalactic
|
---|
701 | //
|
---|
702 | // RefPedRmsClosedLidsInner
|
---|
703 | // RefPedRmsExtraGalacticInner
|
---|
704 | // RefPedRmsGalacticInner
|
---|
705 | // RefPedRmsClosedLidsOuter
|
---|
706 | // RefPedRmsExtraGalacticOuter
|
---|
707 | // RefPedRmsGalacticOuter
|
---|
708 | //
|
---|
709 | void MJPedestal::ReadReferenceFile()
|
---|
710 | {
|
---|
711 | TEnv refenv(fReferenceFile);
|
---|
712 |
|
---|
713 | fPedestalMin = refenv.GetValue("PedestalMin",fPedestalMin);
|
---|
714 | fPedestalMax = refenv.GetValue("PedestalMax",fPedestalMax);
|
---|
715 | fPedRmsMin = refenv.GetValue("PedRmsMin",fPedRmsMin);
|
---|
716 | fPedRmsMax = refenv.GetValue("PedRmsMax",fPedRmsMax);
|
---|
717 | fRefPedClosedLids = refenv.GetValue("RefPedClosedLids",fRefPedClosedLids);
|
---|
718 | fRefPedExtraGalactic = refenv.GetValue("RefPedExtraGalactic",fRefPedExtraGalactic);
|
---|
719 | fRefPedGalactic = refenv.GetValue("RefPedGalactic",fRefPedGalactic);
|
---|
720 | fRefPedRmsClosedLidsInner = refenv.GetValue("RefPedRmsClosedLidsInner",fRefPedRmsClosedLidsInner);
|
---|
721 | fRefPedRmsExtraGalacticInner = refenv.GetValue("RefPedRmsExtraGalacticInner",fRefPedRmsExtraGalacticInner);
|
---|
722 | fRefPedRmsGalacticInner = refenv.GetValue("RefPedRmsGalacticInner",fRefPedRmsGalacticInner);
|
---|
723 | fRefPedRmsClosedLidsOuter = refenv.GetValue("RefPedRmsClosedLidsOuter",fRefPedRmsClosedLidsOuter);
|
---|
724 | fRefPedRmsExtraGalacticOuter = refenv.GetValue("RefPedRmsExtraGalacticOuter",fRefPedRmsExtraGalacticOuter);
|
---|
725 | fRefPedRmsGalacticOuter = refenv.GetValue("RefPedRmsGalacticOuter",fRefPedRmsGalacticOuter);
|
---|
726 | }
|
---|
727 |
|
---|
728 | // --------------------------------------------------------------------------
|
---|
729 | //
|
---|
730 | // The following resource options are available:
|
---|
731 | //
|
---|
732 | // Do a datacheck run (read raw-data and enable display)
|
---|
733 | // Prefix.DataCheck: Yes, No <default>
|
---|
734 | //
|
---|
735 | // Setup display type
|
---|
736 | // Prefix.Display: normal <default>, datacheck, none
|
---|
737 | //
|
---|
738 | // Use cosmic data instead of pedestal data (DatRuns)
|
---|
739 | // Prefix.UseData: Yes, No <default>
|
---|
740 | //
|
---|
741 | // Write an output file with pedestals and status-display
|
---|
742 | // Prefix.DisableOutput: Yes, No <default>
|
---|
743 | //
|
---|
744 | // Name of a file containing reference values (see ReadReferenceFile)
|
---|
745 | // Prefix.ReferenceFile: filename
|
---|
746 | // (see ReadReferenceFile)
|
---|
747 | //
|
---|
748 | Bool_t MJPedestal::CheckEnvLocal()
|
---|
749 | {
|
---|
750 | if (HasEnv("Display"))
|
---|
751 | {
|
---|
752 | TString type = GetEnv("Display", "normal");
|
---|
753 | type.ToLower();
|
---|
754 | if (type==(TString)"normal")
|
---|
755 | fDisplayType = kDisplayNormal;
|
---|
756 | if (type==(TString)"datacheck")
|
---|
757 | fDisplayType = kDisplayDataCheck;
|
---|
758 | if (type==(TString)"none")
|
---|
759 | fDisplayType = kDisplayNone;
|
---|
760 | }
|
---|
761 |
|
---|
762 |
|
---|
763 | SetExtractWinLeft (GetEnv("ExtractWinLeft", fExtractWinLeft ));
|
---|
764 | SetExtractWinRight(GetEnv("ExtractWinRight", fExtractWinRight));
|
---|
765 |
|
---|
766 | SetMinEvents(GetEnv("MinEvents", (Int_t)fMinEvents));
|
---|
767 |
|
---|
768 | if (!MJCalib::CheckEnvLocal())
|
---|
769 | return kFALSE;
|
---|
770 |
|
---|
771 | if (HasEnv("UseData"))
|
---|
772 | fExtractType = GetEnv("UseData",kFALSE) ? kUseData : kUsePedRun;
|
---|
773 |
|
---|
774 | if (fSequence.IsMonteCarlo() && fExtractType==kUseData)
|
---|
775 | {
|
---|
776 | // The reason is, that the standard data files contains empty
|
---|
777 | // (untriggered) events. If we would loop over the default 500
|
---|
778 | // first events of the data file you would calculate the
|
---|
779 | // pedestal from only some single events...
|
---|
780 | *fLog << inf;
|
---|
781 | *fLog << "Sorry, you cannot extract the starting pedestal from the first" << endl;
|
---|
782 | *fLog << "events in your data files... using pedestal file instead. The" << endl;
|
---|
783 | *fLog << "result should not differ..." << endl;
|
---|
784 | fExtractType = kUsePedRun;
|
---|
785 | }
|
---|
786 |
|
---|
787 |
|
---|
788 | if (HasEnv("UseHists"))
|
---|
789 | if (GetEnv("UseHists",kFALSE))
|
---|
790 | fIsUseHists = kTRUE;
|
---|
791 |
|
---|
792 | SetNoStorage(GetEnv("DisableOutput", IsNoStorage()));
|
---|
793 |
|
---|
794 | fDeadPixelCheck = GetEnv("DeadPixelsCheck", fDeadPixelCheck);
|
---|
795 |
|
---|
796 | fBadPixelsFile = GetEnv("BadPixelsFile",fBadPixelsFile.Data());
|
---|
797 | fReferenceFile = GetEnv("ReferenceFile",fReferenceFile.Data());
|
---|
798 | ReadReferenceFile();
|
---|
799 |
|
---|
800 | // ------------- Do not put simple resource below --------------
|
---|
801 |
|
---|
802 | // Setup an environment task
|
---|
803 | MTaskEnv tenv("ExtractSignal");
|
---|
804 | tenv.SetDefault(fExtractor);
|
---|
805 |
|
---|
806 | // check the resource file for it
|
---|
807 | if (!CheckEnv(tenv))
|
---|
808 | return kFALSE;
|
---|
809 |
|
---|
810 | // if (tenv.ReadEnv(*GetEnv(), GetEnvPrefix()+".ExtractSignal", GetEnvDebug()>2)==kERROR)
|
---|
811 | // return kFALSE;
|
---|
812 |
|
---|
813 | // If the resource file didn't change the default we are done
|
---|
814 | if (fExtractor==tenv.GetTask())
|
---|
815 | return kTRUE;
|
---|
816 |
|
---|
817 | // If it changed the default check its inheritance...
|
---|
818 | if (!tenv.GetTask()->InheritsFrom(MExtractor::Class()))
|
---|
819 | {
|
---|
820 | *fLog << err << "ERROR: ExtractSignal from resource file doesn't inherit from MExtractor.... abort." << endl;
|
---|
821 | return kFALSE;
|
---|
822 | }
|
---|
823 |
|
---|
824 | // ..and store it
|
---|
825 | SetExtractor((MExtractor*)tenv.GetTask());
|
---|
826 |
|
---|
827 | return kTRUE;
|
---|
828 | }
|
---|
829 |
|
---|
830 | //---------------------------------------------------------------------------------
|
---|
831 | //
|
---|
832 | Bool_t MJPedestal::WritePulsePos(TObject *obj) const
|
---|
833 | {
|
---|
834 | if (IsNoStorage())
|
---|
835 | return kTRUE;
|
---|
836 |
|
---|
837 | const TString name(Form("signal%08d.root", fSequence.GetSequence()));
|
---|
838 |
|
---|
839 | TObjArray arr;
|
---|
840 | arr.Add(obj);
|
---|
841 | return WriteContainer(arr, name, fOverwrite?"RECREATE":"NEW");
|
---|
842 | }
|
---|
843 |
|
---|
844 | Int_t MJPedestal::PulsePosCheck(const MParList &plist) const
|
---|
845 | {
|
---|
846 | if (fIsPixelCheck)
|
---|
847 | {
|
---|
848 | MHPedestalCam *hcam = (MHPedestalCam*)plist.FindObject("MHPedestalCam");
|
---|
849 | if (hcam)
|
---|
850 | {
|
---|
851 | MHPedestalPix &pix1 = (MHPedestalPix&)(*hcam)[fCheckedPixId];
|
---|
852 | pix1.DrawClone("");
|
---|
853 | }
|
---|
854 | }
|
---|
855 |
|
---|
856 | if (!fIsPulsePosCheck)
|
---|
857 | return kTRUE;
|
---|
858 |
|
---|
859 | // FIXME:
|
---|
860 | // The MC cannot run over the first 2000 pedestal events since almost all
|
---|
861 | // events are empty, therefore a pulse pos. check is not possible, either.
|
---|
862 | // For the moment, have to fix the problem hardcoded...
|
---|
863 | //
|
---|
864 | // MMcEvt *evt = (MMcEvt*)plist.FindObject("MMcEvt");
|
---|
865 | // const Float_t meanpulsetime = evt->GetFadcTimeJitter();
|
---|
866 | Float_t meanpulsetime = 4.5;
|
---|
867 | Float_t rmspulsetime = 1.0;
|
---|
868 |
|
---|
869 | MCalibrationPulseTimeCam *cam = NULL;
|
---|
870 | if (!fSequence.IsMonteCarlo())
|
---|
871 | {
|
---|
872 | if (fIsPixelCheck)
|
---|
873 | {
|
---|
874 | MHCalibrationPulseTimeCam *hcam = (MHCalibrationPulseTimeCam*)plist.FindObject("MHCalibrationPulseTimeCam");
|
---|
875 | if (!hcam)
|
---|
876 | {
|
---|
877 | *fLog << err << "MHCalibrationPulseTimeCam not found... abort." << endl;
|
---|
878 | return kFALSE;
|
---|
879 | }
|
---|
880 | hcam->DrawClone();
|
---|
881 | gPad->SaveAs(Form("%s/PulsePosTest_all.root",fPathOut.Data()));
|
---|
882 |
|
---|
883 | MHCalibrationPix &pix = (*hcam)[fCheckedPixId];
|
---|
884 | pix.DrawClone();
|
---|
885 | gPad->SaveAs(Form("%s/PulsePosTest_Pixel%04d.root",fPathOut.Data(),fCheckedPixId));
|
---|
886 | }
|
---|
887 |
|
---|
888 | cam = (MCalibrationPulseTimeCam*)plist.FindObject("MCalibrationPulseTimeCam");
|
---|
889 | if (!cam)
|
---|
890 | {
|
---|
891 | *fLog << err << "MCalibrationPulseTimeCam not found... abort." << endl;
|
---|
892 | return kFALSE;
|
---|
893 | }
|
---|
894 |
|
---|
895 | meanpulsetime = cam->GetAverageArea(0).GetHiGainMean();
|
---|
896 | rmspulsetime = cam->GetAverageArea(0).GetHiGainRms();
|
---|
897 | }
|
---|
898 |
|
---|
899 | if (!WritePulsePos(cam))
|
---|
900 | return kFALSE;
|
---|
901 |
|
---|
902 | *fLog << all << "Mean pulse time/Avg pos.of maximum (" << (fSequence.IsMonteCarlo()?"MC":"cosmics") << "): ";
|
---|
903 | *fLog << meanpulsetime << "+-" << rmspulsetime << endl;
|
---|
904 |
|
---|
905 | MExtractTimeAndCharge *ext = dynamic_cast<MExtractTimeAndCharge*>(fExtractor);
|
---|
906 | if (!ext)
|
---|
907 | {
|
---|
908 | *fLog << warn << "WARNING - no extractor found inheriting from MExtractTimeAndCharge... no pulse position check." << endl;
|
---|
909 | return kTRUE;
|
---|
910 | }
|
---|
911 |
|
---|
912 | const Int_t hi0 = ext->GetHiGainFirst();
|
---|
913 | const Int_t lo1 = ext->GetLoGainLast();
|
---|
914 | Int_t hi1 = ext->GetHiGainLast();
|
---|
915 | Int_t lo0 = ext->GetLoGainFirst();
|
---|
916 |
|
---|
917 | //
|
---|
918 | // This is for data without lo-gains
|
---|
919 | //
|
---|
920 | const Bool_t haslo = ext->HasLoGain();
|
---|
921 |
|
---|
922 | //
|
---|
923 | // Get the ranges for the new extractor setting. The window
|
---|
924 | // size is always rounded to the next higher integer.
|
---|
925 | //
|
---|
926 | const Int_t wshigain = ext->GetWindowSizeHiGain();
|
---|
927 | const Int_t wslogain = ext->GetWindowSizeLoGain();
|
---|
928 |
|
---|
929 | //
|
---|
930 | // Here we calculate the end of the lo-gain range
|
---|
931 | // as it is done in MExtractTimeAndCharge
|
---|
932 | //
|
---|
933 | const Double_t poshi = meanpulsetime;
|
---|
934 | const Double_t poslo = poshi + ext->GetOffsetLoGain();
|
---|
935 | const Double_t poslo2 = poslo + ext->GetLoGainStartShift();
|
---|
936 |
|
---|
937 | //
|
---|
938 | // Do the right side checks range checks
|
---|
939 | //
|
---|
940 | if (poshi+wshigain+fExtractWinRight > hi1-0.5)
|
---|
941 | {
|
---|
942 | *fLog << err;
|
---|
943 | *fLog << "ERROR - Pulse is too much to the right, out of hi-gain range [";
|
---|
944 | *fLog << hi0 << "," << hi1 << "]" << endl;
|
---|
945 | *fLog << endl;
|
---|
946 | return -2;
|
---|
947 | }
|
---|
948 |
|
---|
949 | if (haslo && poslo+wslogain+fExtractWinRight > lo1-0.5)
|
---|
950 | {
|
---|
951 | *fLog << err;
|
---|
952 | *fLog << "ERROR - Pulse is too much to the right, out of lo-gain range [";
|
---|
953 | *fLog << lo0 << "," << lo1 << "]" << endl;
|
---|
954 | return -2;
|
---|
955 | }
|
---|
956 |
|
---|
957 | //
|
---|
958 | // Do the left side checks range checks
|
---|
959 | //
|
---|
960 | if (poshi-fExtractWinLeft < hi0+0.5)
|
---|
961 | {
|
---|
962 | *fLog << err;
|
---|
963 | *fLog << "ERROR - Pulse is too much to the left, out of hi-gain range [";
|
---|
964 | *fLog << hi0 << "," << hi1 << "]" << endl;
|
---|
965 | return -3;
|
---|
966 | }
|
---|
967 |
|
---|
968 | if (haslo && poslo2-fExtractWinLeft < lo0+0.5)
|
---|
969 | {
|
---|
970 | *fLog << warn;
|
---|
971 | *fLog << "WARNING - Pulse is too much to the left, out of lo-gain range [";
|
---|
972 | *fLog << lo0 << "," << lo1 << "]" << endl;
|
---|
973 | *fLog << "Trying to match extraction window and pulse position..." << endl;
|
---|
974 |
|
---|
975 | //
|
---|
976 | // Set and store the new ranges
|
---|
977 | //
|
---|
978 | Int_t shift = 0;
|
---|
979 | while (poslo2-fExtractWinLeft < lo0+0.5)
|
---|
980 | {
|
---|
981 | hi1--;
|
---|
982 | lo0--;
|
---|
983 |
|
---|
984 | if (poshi+wshigain+fExtractWinRight > hi1-0.5)
|
---|
985 | {
|
---|
986 | *fLog << err << "ERROR - No proper extraction window found.... abort." << endl;
|
---|
987 | return -3;
|
---|
988 | }
|
---|
989 | }
|
---|
990 |
|
---|
991 | *fLog << "Changed extraction window by " << shift;
|
---|
992 | *fLog << "slices to hi-gain [" << hi0 << "," << hi1;
|
---|
993 | *fLog << "] and lo-gain [" << lo0 << "," << lo1 << "]" << endl;
|
---|
994 |
|
---|
995 | ext->SetRange(hi0, hi1, lo0, lo1);
|
---|
996 | }
|
---|
997 |
|
---|
998 | return kTRUE;
|
---|
999 | }
|
---|
1000 |
|
---|
1001 | Int_t MJPedestal::Process()
|
---|
1002 | {
|
---|
1003 | if (!fSequence.IsValid())
|
---|
1004 | {
|
---|
1005 | *fLog << err << "ERROR - Sequence invalid..." << endl;
|
---|
1006 | return kFALSE;
|
---|
1007 | }
|
---|
1008 |
|
---|
1009 | // --------------------------------------------------------------------------------
|
---|
1010 |
|
---|
1011 | const TString type = IsUseData() ? "data" : "pedestal";
|
---|
1012 |
|
---|
1013 | *fLog << inf;
|
---|
1014 | fLog->Separator(GetDescriptor());
|
---|
1015 | *fLog << "Calculate MPedestalCam from " << type << "-runs ";
|
---|
1016 | *fLog << fSequence.GetFileName() << endl;
|
---|
1017 | *fLog << endl;
|
---|
1018 |
|
---|
1019 | // --------------------------------------------------------------------------------
|
---|
1020 |
|
---|
1021 | if (!CheckEnv())
|
---|
1022 | return kFALSE;
|
---|
1023 |
|
---|
1024 | MParList plist;
|
---|
1025 | MTaskList tlist;
|
---|
1026 | plist.AddToList(&tlist);
|
---|
1027 | plist.AddToList(this); // take care of fDisplay!
|
---|
1028 |
|
---|
1029 | MReadMarsFile read("Events");
|
---|
1030 | MRawFileRead rawread(NULL);
|
---|
1031 |
|
---|
1032 | MDirIter iter;
|
---|
1033 | if (fSequence.IsValid())
|
---|
1034 | {
|
---|
1035 | const Int_t n0 = IsUseData()
|
---|
1036 | ? fSequence.SetupDatRuns(iter, 0, !fSequence.IsMonteCarlo())
|
---|
1037 | : fSequence.SetupPedRuns(iter, 0, !fSequence.IsMonteCarlo());
|
---|
1038 |
|
---|
1039 | if (n0<=0)
|
---|
1040 | return kFALSE;
|
---|
1041 | }
|
---|
1042 |
|
---|
1043 | if (!fSequence.IsMonteCarlo())
|
---|
1044 | {
|
---|
1045 | rawread.AddFiles(iter);
|
---|
1046 | tlist.AddToList(&rawread);
|
---|
1047 | }
|
---|
1048 | else
|
---|
1049 | {
|
---|
1050 | read.DisableAutoScheme();
|
---|
1051 | read.AddFiles(iter);
|
---|
1052 | tlist.AddToList(&read);
|
---|
1053 | }
|
---|
1054 |
|
---|
1055 | // Setup Tasklist
|
---|
1056 | plist.AddToList(&fPedestalCamOut);
|
---|
1057 | plist.AddToList(&fBadPixels);
|
---|
1058 |
|
---|
1059 | MGeomApply geomapl;
|
---|
1060 | MBadPixelsMerge merge(&fBadPixels);
|
---|
1061 |
|
---|
1062 | MPedCalcPedRun pedcalc;
|
---|
1063 | //pedcalc.SetPedestalUpdate(kFALSE);
|
---|
1064 |
|
---|
1065 | MPedCalcFromLoGain pedlogain;
|
---|
1066 | pedlogain.SetPedestalUpdate(kFALSE);
|
---|
1067 |
|
---|
1068 | MHPedestalCam hpedcam;
|
---|
1069 | hpedcam.SetPedestalsOut(&fPedestalCamOut);
|
---|
1070 | if (fExtractionType != kFundamental)
|
---|
1071 | hpedcam.SetRenorm(kTRUE);
|
---|
1072 |
|
---|
1073 | // To have it in the parlist for MEnv!
|
---|
1074 | MHCalibrationPulseTimeCam pulcam;
|
---|
1075 | plist.AddToList(&pulcam);
|
---|
1076 | MFillH fillpul(&pulcam, "MPedestalSubtractedEvt", "FillPulseTime");
|
---|
1077 | fillpul.SetBit(MFillH::kDoNotDisplay);
|
---|
1078 |
|
---|
1079 | tlist.AddToList(&geomapl);
|
---|
1080 | tlist.AddToList(&merge);
|
---|
1081 |
|
---|
1082 | if (!fPathIn.IsNull())
|
---|
1083 | {
|
---|
1084 | fExtractor = ReadCalibration();
|
---|
1085 | if (!fExtractor)
|
---|
1086 | return kFALSE;
|
---|
1087 |
|
---|
1088 | // The requested setup might have been overwritten
|
---|
1089 | if (!CheckEnv(*fExtractor))
|
---|
1090 | return kFALSE;
|
---|
1091 |
|
---|
1092 | *fLog << all;
|
---|
1093 | *fLog << underline << "Signal Extractor found in calibration file and setup:" << endl;
|
---|
1094 | fExtractor->Print();
|
---|
1095 | *fLog << endl;
|
---|
1096 | }
|
---|
1097 |
|
---|
1098 | //
|
---|
1099 | // Read bad pixels from outside
|
---|
1100 | //
|
---|
1101 | if (!fBadPixelsFile.IsNull())
|
---|
1102 | {
|
---|
1103 | *fLog << inf << "Excluding: " << fBadPixelsFile << endl;
|
---|
1104 | ifstream fin(fBadPixelsFile);
|
---|
1105 | fBadPixels.AsciiRead(fin);
|
---|
1106 | }
|
---|
1107 |
|
---|
1108 | // This will make that for data with version less than 5, where
|
---|
1109 | // trigger patterns were not yet correct, all the events in the real
|
---|
1110 | // data file will be processed. In any case there are no interleaved
|
---|
1111 | // calibration events in such data, so this is fine.
|
---|
1112 | MTriggerPatternDecode decode;
|
---|
1113 | MFTriggerPattern fcalib("CalibFilter");
|
---|
1114 | fcalib.SetDefault(kTRUE);
|
---|
1115 | fcalib.DenyCalibration();
|
---|
1116 | fcalib.DenyPedestal();
|
---|
1117 |
|
---|
1118 | tlist.AddToList(&decode);
|
---|
1119 |
|
---|
1120 | // produce pedestal subtracted raw-data
|
---|
1121 | MPedestalSubtract pedsub;
|
---|
1122 | if (fExtractor && fExtractionType!=kFundamental)
|
---|
1123 | pedsub.SetPedestalCam(&fPedestalCamIn);
|
---|
1124 | else
|
---|
1125 | pedsub.SetNamePedestalCam(""); // Only copy hi- and lo-gain together!
|
---|
1126 | tlist.AddToList(&pedsub);
|
---|
1127 |
|
---|
1128 | if (fIsPulsePosCheck)
|
---|
1129 | {
|
---|
1130 | fillpul.SetFilter(&fcalib);
|
---|
1131 | tlist.AddToList(&fcalib);
|
---|
1132 | tlist.AddToList(&fillpul);
|
---|
1133 | }
|
---|
1134 |
|
---|
1135 | //MFillH fillC("MHPedestalCor", "MPedestalSubtractedEvt", "FillAcor");
|
---|
1136 | //fillC.SetNameTab("Acor");
|
---|
1137 | //if (fExtractor && fExtractionType==kWithExtractorRndm)
|
---|
1138 | // tlist.AddToList(&fillC);
|
---|
1139 |
|
---|
1140 | // ----------------------------------------------------------------------
|
---|
1141 | // Now we make sure, that in all cases the ranges are setup correctly
|
---|
1142 | // ----------------------------------------------------------------------
|
---|
1143 | MTaskEnv taskenv("ExtractPedestal");
|
---|
1144 |
|
---|
1145 | //------------------------------
|
---|
1146 | MFTriggerPattern ftp2("PedestalFilter");
|
---|
1147 | ftp2.SetDefault(kTRUE);
|
---|
1148 | ftp2.DenyCalibration();
|
---|
1149 | ftp2.RequirePedestal();
|
---|
1150 |
|
---|
1151 | if (!fSequence.IsMonteCarlo() && (!fExtractor || !fExtractor->HasLoGain()))
|
---|
1152 | {
|
---|
1153 | taskenv.SetFilter(&ftp2);
|
---|
1154 | tlist.AddToList(&ftp2);
|
---|
1155 | }
|
---|
1156 | //------------------------------
|
---|
1157 |
|
---|
1158 | switch (fExtractType)
|
---|
1159 | {
|
---|
1160 | case kUsePedRun:
|
---|
1161 | // In case other than 'fundamental' second argument is obsolete
|
---|
1162 | // pedcalc.SetExtractWindow(0,14); // kUsePedRun (take default from class)
|
---|
1163 | taskenv.SetDefault(&pedcalc);
|
---|
1164 | tlist.AddToList(&taskenv);
|
---|
1165 | break;
|
---|
1166 |
|
---|
1167 | case kUseData:
|
---|
1168 | // In case other than 'fundamental' second argument is obsolete
|
---|
1169 | // pedlogain.SetExtractWindow(15,14); // kUseData (take default from class)
|
---|
1170 | taskenv.SetDefault(&pedlogain);
|
---|
1171 | tlist.AddToList(&taskenv);
|
---|
1172 | break;
|
---|
1173 | }
|
---|
1174 |
|
---|
1175 | if (fIsUseHists && fExtractor)
|
---|
1176 | {
|
---|
1177 | if (fExtractor->InheritsFrom("MExtractTimeAndCharge"))
|
---|
1178 | {
|
---|
1179 | if (fExtractionType!=kFundamental)
|
---|
1180 | {
|
---|
1181 | const MExtractTimeAndCharge &e = *static_cast<MExtractTimeAndCharge*>(fExtractor);
|
---|
1182 | hpedcam.SetFitStart(-5*e.GetWindowSizeHiGain());
|
---|
1183 | }
|
---|
1184 | else
|
---|
1185 | hpedcam.SetFitStart(10.);
|
---|
1186 | }
|
---|
1187 |
|
---|
1188 | plist.AddToList(&hpedcam);
|
---|
1189 | }
|
---|
1190 |
|
---|
1191 | pedcalc.SetPedestalsOut(&fPedestalCamOut);
|
---|
1192 | pedlogain.SetPedestalsOut(&fPedestalCamOut);
|
---|
1193 |
|
---|
1194 | // kFundamental
|
---|
1195 | if (fExtractor)
|
---|
1196 | {
|
---|
1197 | if (fExtractionType!=kFundamental)
|
---|
1198 | {
|
---|
1199 | pedcalc.SetRandomCalculation(fExtractionType==kWithExtractorRndm);
|
---|
1200 | pedlogain.SetRandomCalculation(fExtractionType==kWithExtractorRndm);
|
---|
1201 |
|
---|
1202 | pedcalc.SetExtractor((MExtractTimeAndCharge*)fExtractor);
|
---|
1203 | pedlogain.SetExtractor((MExtractTimeAndCharge*)fExtractor);
|
---|
1204 | }
|
---|
1205 | else
|
---|
1206 | {
|
---|
1207 | pedcalc.SetRangeFromExtractor(*fExtractor);
|
---|
1208 | pedlogain.SetRangeFromExtractor(*fExtractor);
|
---|
1209 | }
|
---|
1210 |
|
---|
1211 | if (!fExtractor->InheritsFrom("MExtractTimeAndCharge") && fExtractionType!=kFundamental)
|
---|
1212 | {
|
---|
1213 | *fLog << inf;
|
---|
1214 | *fLog << "Signal extractor doesn't inherit from MExtractTimeAndCharge..." << endl;
|
---|
1215 | *fLog << " --> falling back to fundamental pedestal extraction." << endl;
|
---|
1216 | fExtractionType=kFundamental;
|
---|
1217 | }
|
---|
1218 | }
|
---|
1219 | else
|
---|
1220 | {
|
---|
1221 | *fLog << warn << GetDescriptor() << ": WARNING - No extractor has been handed over! " << endl;
|
---|
1222 | *fLog << "Taking default window for pedestal extraction. The calculated pedestal RMS" << endl;
|
---|
1223 | *fLog << "will probably not match with future pedestal RMS' from different extraction" << endl;
|
---|
1224 | *fLog << "windows." << endl;
|
---|
1225 | }
|
---|
1226 |
|
---|
1227 |
|
---|
1228 | /*
|
---|
1229 | MHCamEvent evt0(0, "Ped", "Pedestal;;P [cnts/sl]");
|
---|
1230 | MHCamEvent evt1(2, "PedRms", "Pedestal RMS;;\\sigma_{p} [cnts/sl]");
|
---|
1231 |
|
---|
1232 | MFillH fill0(&evt0, &fPedestalCamOut, "FillPedestal");
|
---|
1233 | MFillH fill1(&evt1, &fPedestalCamOut, "FillPedRms");
|
---|
1234 |
|
---|
1235 | tlist.AddToList(&fill0);
|
---|
1236 | tlist.AddToList(&fill1);
|
---|
1237 | */
|
---|
1238 |
|
---|
1239 | //
|
---|
1240 | // Execute the eventloop
|
---|
1241 | //
|
---|
1242 | MEvtLoop evtloop(fName);
|
---|
1243 | evtloop.SetParList(&plist);
|
---|
1244 | evtloop.SetDisplay(fDisplay);
|
---|
1245 | evtloop.SetLogStream(fLog);
|
---|
1246 | if (!SetupEnv(evtloop))
|
---|
1247 | return kFALSE;
|
---|
1248 |
|
---|
1249 | // if (!WriteEventloop(evtloop))
|
---|
1250 | // return kFALSE;
|
---|
1251 |
|
---|
1252 | // Execute first analysis
|
---|
1253 | if (!evtloop.Eventloop(fMaxEvents))
|
---|
1254 | {
|
---|
1255 | *fLog << err << GetDescriptor() << ": Failed." << endl;
|
---|
1256 | return kFALSE;
|
---|
1257 | }
|
---|
1258 |
|
---|
1259 | if (taskenv.GetNumExecutions()<fMinEvents)
|
---|
1260 | {
|
---|
1261 | *fLog << err << GetDescriptor() << ": Failed. Less than the required " << fMinEvents << " evts processed." << endl;
|
---|
1262 | return kFALSE;
|
---|
1263 | }
|
---|
1264 |
|
---|
1265 | if (fDeadPixelCheck)
|
---|
1266 | {
|
---|
1267 | MBadPixelsCalc calc;
|
---|
1268 | calc.SetPedestalLevelVarianceLo(4.5);
|
---|
1269 | calc.SetPedestalLevelVarianceHi();
|
---|
1270 | calc.SetPedestalLevel();
|
---|
1271 | if (!CheckEnv(calc))
|
---|
1272 | return kFALSE;
|
---|
1273 | calc.SetGeomCam(dynamic_cast<MGeomCam*>(plist.FindObject("MGeomCam")));
|
---|
1274 | if (!calc.CheckPedestalRms(fBadPixels, fPedestalCamOut))
|
---|
1275 | {
|
---|
1276 | *fLog << err << "ERROR - MBadPixelsCalc::CheckPedestalRms failed...." << endl;
|
---|
1277 | return kFALSE;
|
---|
1278 | }
|
---|
1279 | }
|
---|
1280 |
|
---|
1281 | if (fDisplayType!=kDisplayNone)
|
---|
1282 | DisplayResult(plist);
|
---|
1283 |
|
---|
1284 | // if (!WriteResult())
|
---|
1285 | // return kFALSE;
|
---|
1286 |
|
---|
1287 | const Int_t rc = PulsePosCheck(plist);
|
---|
1288 | if (rc<1)
|
---|
1289 | return rc;
|
---|
1290 |
|
---|
1291 | *fLog << all << GetDescriptor() << ": Done." << endl;
|
---|
1292 | *fLog << endl << endl;
|
---|
1293 |
|
---|
1294 | return kTRUE;
|
---|
1295 | }
|
---|