1 | /*********************************/
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2 | /* Compute the hillas parameters */
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3 | /*********************************/
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4 |
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5 | #include "TString.h"
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6 | #include "TArrayS.h"
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7 |
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8 | #include "MParList.h"
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9 | #include "MTaskList.h"
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10 | #include "MPedestalCam.h"
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11 | #include "MBadPixelsCam.h"
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12 | #include "MBadPixelsTreat.h"
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13 | #include "MReadMarsFile.h"
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14 | #include "MGeomApply.h"
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15 | #include "MPedCalcPedRun.h"
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16 | #include "MEvtLoop.h"
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17 | #include "MGeomCamMagic.h"
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18 | #include "MExtractedSignalCam.h"
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19 | #include "MCalibrationChargeCam.h"
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20 | #include "MCalibrationQECam.h"
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21 | #include "MCalibrationQEPix.h"
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22 | #include "MHCalibrationChargeCam.h"
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23 | #include "MHCalibrationRelTimeCam.h"
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24 | #include "MExtractor.h"
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25 | #include "MExtractFixedWindow.h"
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26 | #include "MExtractSlidingWindow.h"
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27 | #include "MExtractSignal.h"
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28 | #include "MCalibrationChargeCalc.h"
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29 | #include "MFCosmics.h"
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30 | #include "MContinue.h"
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31 | #include "MLog.h"
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32 | #include "MCerPhotEvt.h"
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33 | #include "MPedPhotCam.h"
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34 | #include "MCalibrate.h"
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35 | #include "MPedPhotCalc.h"
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36 | #include "MHillas.h"
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37 | #include "MNewImagePar.h"
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38 | #include "MRawRunHeader.h"
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39 | #include "MSrcPosCam.h"
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40 | #include "MBlindPixelCalc.h"
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41 | #include "MImgCleanStd.h"
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42 | #include "MHillasSrcCalc.h"
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43 | #include "MHillasCalc.h"
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44 | #include "MArrivalTimeCam.h"
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45 | #include "MArrivalTimeCalc2.h"
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46 | #include "MIslands.h"
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47 | #include "MIslandCalc.h"
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48 | #include "MIslandClean.h"
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49 | #include "MWriteRootFile.h"
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50 | #include "MArgs.h"
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51 | #include "MRunIter.h"
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52 | #include "MJPedestal.h"
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53 | #include "MJCalibration.h"
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54 | #include "MHillasDisplay.h"
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55 | #include "MF.h"
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56 | #include "MContinue.h"
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57 |
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58 | #include "TApplication.h"
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59 |
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60 | #include <iostream>
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61 | #include <fstream>
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62 | #include <stdlib.h>
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63 |
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64 | using namespace std;
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65 |
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66 | Bool_t readDatacards(TString& filename);
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67 | void calib();
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68 |
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69 | // initial and final time slices to be used in signal extraction
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70 | const Byte_t hifirst = 1;
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71 | const Byte_t hilast = 14;
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72 | const Byte_t lofirst = 3;
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73 | const Byte_t lolast = 14;
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74 |
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75 | // declaration of variables read from datacards
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76 | TString outname;
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77 | TString idirname;
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78 | TString filter;
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79 | TString psfilename("makehillas.ps");
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80 | MRunIter caliter;
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81 | MRunIter pediter;
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82 | MRunIter datiter;
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83 | UInt_t display = 0;
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84 | ULong_t nmaxevents= 999999999;
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85 | Short_t calflag = 1;
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86 | Float_t lcore = 3.0;
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87 | Float_t ltail = 1.5;
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88 | Int_t islflag = 0;
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89 | Float_t lnew = 40;
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90 | Int_t kmethod = 1;
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91 | Int_t kalgorithm = 1;
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92 | Int_t nfiles = 0;
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93 |
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94 | const TString defaultcard="makehillas.datacard";
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95 | /*************************************************************/
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96 | static void Usage()
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97 | {
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98 | gLog <<endl;
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99 | gLog << "Usage is:" << endl;
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100 | gLog << " calib [-h] [-?] <datacards>" << endl << endl;
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101 | gLog << " <datacards>: datacards file name (dafault input.datacards)" << endl;
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102 | gLog << " -?/-h: This help" << endl << endl;
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103 | }
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104 | /*************************************************************/
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105 | int main(int argc, char **argv)
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106 | {
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107 | // create a TApplication to be able to
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108 | TApplication app("Application",0,0);
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109 |
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110 | // evaluate arguments
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111 | MArgs arg(argc, argv);
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112 | if (arg.HasOnly("-?") || arg.HasOnly("-h") || arg.HasOnly("--help"))
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113 | {
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114 | Usage();
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115 | return -1;
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116 | }
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117 |
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118 | TString datacard = arg.GetArgumentStr(0);
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119 | if(!datacard.Length())
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120 | datacard = defaultcard;
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121 |
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122 | if(!readDatacards(datacard))
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123 | {
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124 | cout << "Error reading datacards. Stoping" << endl;
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125 | return -1;
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126 | }
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127 |
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128 | calib();
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129 | }
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130 |
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131 | /*************************************************************/
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132 | void calib()
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133 | {
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134 | // Set the general tasks/containers
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135 | MExtractFixedWindow extractor;
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136 | extractor.SetRange(hifirst,hilast,lofirst,lolast);
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137 |
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138 | // MExtractSlidingWindow extractor;
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139 | // extractor.SetRange(hifirst,hilast,lofirst,lolast);
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140 | // extractor.SetWindowSize(2,2);
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141 |
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142 | MGeomCamMagic geomcam;
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143 | MGeomApply geomapl;
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144 |
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145 | /************************************/
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146 | /* FIRST LOOP: PEDESTAL COMPUTATION */
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147 | /************************************/
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148 |
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149 | // If you want to exclude pixels from the beginning, read
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150 | // an ascii-file with the corr. pixel numbers (see MBadPixelsCam)
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151 | //badcam.AsciiRead("badpixels.dat");
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152 |
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153 | MJPedestal pedloop;
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154 | pedloop.SetInput(&pediter);
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155 | pedloop.SetExtractor(&extractor);
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156 | // pedloop.SetBadPixels(badcam);
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157 |
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158 | if (!pedloop.Process())
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159 | return;
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160 |
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161 | /*****************************/
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162 | /* SECOND LOOP: CALIBRATION */
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163 | /*****************************/
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164 |
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165 | MJCalibration calloop;
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166 |
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167 | calloop.SetExtractor(&extractor);
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168 | calloop.SetInput(&caliter);
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169 | calloop.SetBadPixels(pedloop.GetBadPixels());
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170 | if(calflag==2)
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171 | calloop.SetUseBlindPixel();
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172 |
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173 | if(calflag>0)
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174 | if (!calloop.Process(pedloop.GetPedestalCam()))
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175 | return;
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176 |
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177 | Float_t meanCharge[577];
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178 | Float_t meanSigma[577];
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179 | Float_t meanFADC2Phe[577];
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180 | Float_t meanFADC2Phe_error[577];
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181 | Float_t meanFADCtoPh[577];
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182 | Float_t prob[577];
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183 | ofstream fout;
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184 |
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185 | fout.open(outname);
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186 |
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187 | for (Int_t i=0; i<577; i++)
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188 | {
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189 | meanCharge[i] = 0;
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190 | MCalibrationChargePix calpix = (MCalibrationChargePix&)(calloop.GetCalibrationCam())[i];
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191 | MCalibrationQEPix qepix = ( MCalibrationQEPix&)(calloop.GetQECam())[i];
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192 | meanCharge[i] = calpix.GetMean();
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193 | meanSigma[i] = calpix.GetSigma();
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194 | meanFADC2Phe[i]=calpix.GetMeanConvFADC2Phe();
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195 | meanFADC2Phe_error[i]=calpix.GetMeanConvFADC2PheErr();
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196 | meanFADCtoPh[i]=calpix.GetMeanConvFADC2Phe()/qepix.GetQECascadesFFactor(0);
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197 | prob[i]=calpix.GetProb();
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198 | fout << i << '\t' << meanCharge[i] << '\t' << meanSigma[i]<< '\t' << meanFADC2Phe[i]<< '\t' << meanFADC2Phe_error[i]<< '\t' <<meanFADCtoPh[i]<< '\t' <<prob[i]<< '\t' <<(Int_t)calpix.IsHiGainSaturation()<< '\t' <<(Int_t)calpix.IsFFactorMethodValid()<<endl;
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199 | }
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200 |
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201 | fout.close();
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202 |
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203 | /*****************************************************/
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204 | /* THIRD LOOP: Q in fadc event by event CALIBRATION */
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205 | /*****************************************************/
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206 |
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207 | MParList plist4;
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208 | MTaskList tlist4;
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209 | plist4.AddToList(&tlist4);
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210 |
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211 | // containers
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212 |
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213 | MCerPhotEvt nphot;
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214 | plist4.AddToList(&geomcam);
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215 | plist4.AddToList(&pedloop.GetPedestalCam());
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216 | plist4.AddToList(&nphot);
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217 |
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218 | //tasks
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219 | MReadMarsFile read4("Events");
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220 | static_cast<MRead&>(read4).AddFiles(caliter);
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221 | read4.DisableAutoScheme();
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222 |
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223 | MCalibrate::CalibrationMode_t calMode=MCalibrate::kNone;
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224 |
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225 | MCalibrate photcalc(calMode);
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226 |
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227 | tlist4.AddToList(&read4);
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228 | tlist4.AddToList(&geomapl);
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229 | tlist4.AddToList(&extractor);
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230 | tlist4.AddToList(&photcalc);
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231 |
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232 | // Create and setup the eventloop
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233 | MEvtLoop datloop;
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234 | datloop.SetParList(&plist4);
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235 |
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236 | // if (!datloop.Eventloop(nmaxevents))
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237 | // return;
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238 | outname+="_evt";
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239 |
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240 | datloop.PreProcess();
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241 |
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242 | fout.open(outname);
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243 | while(tlist4.Process())
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244 | {
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245 | for(int i=0;i<577;i++)
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246 | fout<<nphot[i].GetNumPhotons()<<" ";
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247 | fout<<endl;
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248 | }
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249 | fout.close();
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250 | datloop.PostProcess();
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251 | return;
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252 |
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253 | }
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254 | //-------------------------------------------------------------------------------
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255 |
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256 | Bool_t readDatacards(TString& filename)
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257 | {
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258 | ifstream ifun(filename.Data());
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259 | if(!ifun)
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260 | {
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261 | cout << "File " << filename << " not found" << endl;
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262 | return kFALSE;
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263 | }
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264 |
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265 | TString word;
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266 |
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267 | while(ifun >> word)
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268 | {
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269 | // skip comments
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270 | if(word[0]=='/' && word[1]=='/')
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271 | {
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272 | while(ifun.get()!='\n'); // skip line
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273 | continue;
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274 | }
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275 |
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276 | // input file directory
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277 | if(strcmp(word.Data(),"IDIR")==0)
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278 | {
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279 | if(idirname.Length())
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280 | cout << "readDataCards Warning: overriding input directory file name" << endl;
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281 | ifun >> idirname;
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282 | }
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283 |
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284 | // pedestal runs
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285 | if(strcmp(word.Data(),"PRUNS")==0)
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286 | {
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287 | if(pediter.GetNumRuns())
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288 | cout << "readDataCards Warning: adding pedestal runs to the existing list" << endl;
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289 | ifun >> word;
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290 | pediter.AddRuns(word.Data(),idirname.Data());
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291 | }
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292 |
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293 | // calibration runs
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294 | if(strcmp(word.Data(),"CRUNS")==0)
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295 | {
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296 | if(caliter.GetNumRuns())
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297 | cout << "readDataCards Warning: adding calibration runs to the existing list" << endl;
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298 | ifun >> word;
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299 | caliter.AddRuns(word.Data(),idirname.Data());
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300 | }
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301 |
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302 | // output file name
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303 | if(strcmp(word.Data(),"OUTFILE")==0)
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304 | {
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305 | if(outname.Length())
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306 | cout << "readDataCards Warning: overriding output file name" << endl;
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307 | ifun >> outname;
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308 | }
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309 |
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310 | // calibration flag
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311 | if(strcmp(word.Data(),"CALFLAG")==0)
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312 | ifun >> calflag;
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313 |
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314 |
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315 | }
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316 |
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317 | pediter.Reset();
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318 | caliter.Reset();
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319 | datiter.Reset();
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320 | TString pfile;
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321 |
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322 | // Dump read values
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323 | cout << "************************************************" << endl;
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324 | cout << "* Datacards read from file " << filename << endl;
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325 | cout << "************************************************" << endl;
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326 | cout << "Pedestal file (s): " << endl;
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327 | while(!(pfile=pediter.Next()).IsNull())
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328 | cout << pfile << endl;
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329 | cout << "Calibration file (s): " << endl;
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330 | while(!(pfile=caliter.Next()).IsNull())
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331 | cout << pfile << endl;
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332 | cout << "Output file name: " << outname << endl;
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333 | cout << "Calibration: ";
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334 | if(calflag==0)
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335 | cout << "Pixel area proportional intercalibration" << endl;
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336 | else if(calflag==-1)
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337 | cout << "No calibration whatsoever" << endl;
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338 | else if(calflag==1)
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339 | cout << "Default calibration" << endl;
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340 | else if(calflag==11)
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341 | cout << "Default calibration + bad pixels interpolation" << endl;
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342 |
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343 | if(!pediter.GetNumEntries())
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344 | {
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345 | cout << "No pedestal file name specified" << endl;
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346 | return kFALSE;
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347 | }
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348 | if(!caliter.GetNumEntries() && calflag>0)
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349 | {
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350 | cout << "No calibration file name specified" << endl;
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351 | return kFALSE;
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352 | }
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353 | if(!outname.Length())
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354 | {
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355 | cout << "No output file name specified" << endl;
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356 | return kFALSE;
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357 | }
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358 |
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359 |
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360 | return kTRUE;
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361 | }
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362 |
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