| 1 | #!/bin/sh
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| 2 | #
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| 3 | # ========================================================================
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| 4 | #
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| 5 | # *
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| 6 | # * This file is part of MARS, the MAGIC Analysis and Reconstruction
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| 7 | # * Software. It is distributed to you in the hope that it can be a useful
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| 8 | # * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
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| 9 | # * It is distributed WITHOUT ANY WARRANTY.
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| 10 | # *
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| 11 | # * Permission to use, copy, modify and distribute this software and its
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| 12 | # * documentation for any purpose is hereby granted without fee,
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| 13 | # * provided that the above copyright notice appear in all copies and
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| 14 | # * that both that copyright notice and this permission notice appear
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| 15 | # * in supporting documentation. It is provided "as is" without express
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| 16 | # * or implied warranty.
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| 17 | # *
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| 18 | #
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| 19 | #
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| 20 | # Author(s): Daniela Dorner 08/2004 <mailto:dorner@astro.uni-wuerzburg.de>
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| 21 | #
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| 22 | # Copyright: MAGIC Software Development, 2000-2007
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| 23 | #
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| 24 | #
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| 25 | # ========================================================================
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| 26 | #
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| 27 | #
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| 28 | # This script handles the subsystem logfiles, which are copied every
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| 29 | # day automatically from /local/ on pc15 in La Palma to
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| 30 | # /home/lapalma/transfer/ on coma in the datacenter in Wuerzburg
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| 31 | # The structure in this directory is: subsystem/date/logfile.*
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| 32 | # The logfiles are from CC (*.rep, CC*.dbg, CC*.rbk, CC*.rep, CC*.run,
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| 33 | # CC*.run.html), Cosy (cosy*.log, cosy*.rep, tpoint*.txt/starg*.txt)
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| 34 | # AMC (AMC*.log, AMC*.info, AMC*.lut) and CaCo (dc*.txt)
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| 35 | #
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| 36 | # the script performs the following steps:
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| 37 | # ----------------------------------------
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| 38 | # - filling the information from the *.rbk and *.run files into the DB
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| 39 | # using the macros filldotrbk.C and filldotrun.C
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| 40 | # - moving all logfiles to the correct directory:
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| 41 | # /subsystemdata/subsystem/YYYY/MM/DD/file.*
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| 42 | # - building the sequences for the standard analysis in the database
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| 43 | # (for each day of which a file was copied)
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| 44 | # - if a new catalogfile has been copied, it is installed as standard in the
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| 45 | # setup directory /magic/datacenter/setup and the new lines are sent to
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| 46 | # the adresses specified in the script
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| 47 | #
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| 48 | # -- to make sure that no file is copied twice there's a textfile
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| 49 | # (.processed), to which every file, that was processed, is added
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| 50 | # .processed is copied to La Palma, so that it is possible to copy
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| 51 | # only new files
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| 52 | # -- to make sure that a file was copied completely before it is
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| 53 | # processed, a file with the checksum of all files is also copied from
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| 54 | # La Palma and the checksum is checked with this script for each file
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| 55 | # before processing it.
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| 56 | #
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| 57 | #
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| 58 |
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| 59 | source `dirname $0`/sourcefile
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| 60 | printprocesslog "INFO starting $0"
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| 61 | program=copyscript
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| 62 |
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| 63 | set -C
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| 64 |
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| 65 | umask 0002
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| 66 |
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| 67 | transdir=/home/lapalma/transfer
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| 68 | char=24
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| 69 | datetime=`date +%F-%H-%M-%S`
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| 70 | lockfile=$lockpath/lock-$program.txt
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| 71 |
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| 72 | scriptlog=$runlogpath/$program-$datetime.log
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| 73 | date >> $scriptlog 2>&1
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| 74 |
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| 75 | # check if the script is already running
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| 76 | checklock >> $scriptlog 2>&1
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| 77 |
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| 78 | cd $transdir
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| 79 |
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| 80 | #check the checksums, write output into file
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| 81 | md5sum -c .checksums | tee $transdir/.check >> $scriptlog 2>&1
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| 82 |
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| 83 | if ! test -e $transdir/.check
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| 84 | then
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| 85 | echo "couldn't create checkfile -> exit script" >> $scriptlog 2>&1
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| 86 | finish >> $scriptlog 2>&1
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| 87 | else
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| 88 | echo "checkfile created" >> $scriptlog 2>&1
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| 89 | fi
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| 90 |
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| 91 |
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| 92 | ssh lapalma@dc09 chmod -R g+w $transdir/* >> $scriptlog 2>&1
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| 93 |
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| 94 |
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| 95 | cd $mars
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| 96 |
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| 97 | echo "remove empty directories: " >> $scriptlog 2>&1
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| 98 | rmdir -pv $transdir/*/* >> $scriptlog 2>&1
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| 99 |
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| 100 | #find all dates in transfer-directory
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| 101 | dates=`find $transdir/*/ -type d | grep -o --regexp=20[0-9][0-9]_[0-1][0-9]_[0-3][0-9] | sort | uniq` >> $scriptlog 2>&1
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| 102 | if ! [ "$dates" = "" ]
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| 103 | then
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| 104 | echo "dates found: "$dates >> $scriptlog 2>&1
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| 105 | #loop over dates
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| 106 | for date in ${dates[@]}
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| 107 | do
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| 108 | printprocesslog "INFO processing files for $date"
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| 109 | #find all files for this date
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| 110 | files=`find $transdir/*/$date/ -name "*.*"` >> $scriptlog 2>&1
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| 111 | if [ "$files" = "" ]
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| 112 | then
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| 113 | echo "no files found for $date" >> $scriptlog 2>&1
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| 114 | continue
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| 115 | else
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| 116 | echo "files found for $date" >> $scriptlog 2>&1
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| 117 | fi
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| 118 |
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| 119 | date2=`echo $date | sed -e 's/_/\//g'`
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| 120 | copylogpath=$logpath/$program/$date2
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| 121 | echo "copylogpath: "$copylogpath >> $scriptlog 2>&1
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| 122 | makedir $copylogpath >> $scriptlog 2>&1
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| 123 |
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| 124 | #loop over all files in the directories for this date
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| 125 | for file in $files
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| 126 | do
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| 127 | echo "file: "$file >> $scriptlog 2>&1
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| 128 | filename=`basename $file`
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| 129 |
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| 130 | #check for each file whether it has to be processed
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| 131 | if grep -i "$filename: OK" $transdir/.check >> $scriptlog 2>&1
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| 132 | then
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| 133 | newfile=`echo $file | sed -e 's/home\/lapalma\/transfer/magic\/subsystemdata/' -e 's/ccdata/cc/' -e 's/cacodata/caco/' -e 's/drivelogs/drive/' -e 's/_/\//1' -e 's/_/\//1' `
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| 134 | echo "file (new path): "$newfile >> $scriptlog 2>&1
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| 135 | newpath=`dirname $newfile`
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| 136 | #make sure, that the needed directories are available
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| 137 | makedir $newpath >> $scriptlog 2>&1
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| 138 |
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| 139 | #run macros if the file is a *.rbk or a *.run file to
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| 140 | #fill the information into the db
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| 141 | if echo $filename | grep \\\.rbk$ >> $scriptlog 2>&1
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| 142 | then
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| 143 | echo "found rbk-file $filename" >> $scriptlog 2>&1
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| 144 |
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| 145 | checkfillrbk=`root -q -b $macrospath/filldotrbk.C+\("\"$file\""\,kFALSE\) | tee $copylogpath/filldotrbk-$filename-log.txt | intgrep`
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| 146 |
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| 147 | case $checkfillrbk in
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| 148 | 1) echo " checkfillrbk=$checkfillrbk -> everything ok " >> $scriptlog 2>&1
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| 149 | echo " -> go on with moving file" >> $scriptlog 2>&1
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| 150 | ;;
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| 151 | *) echo " checkfillrbk=$checkfillrbk - Error -> go on with next file" >> $scriptlog 2>&1
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| 152 | printprocesslog "ERROR filldotrbk.C failed for $file"
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| 153 | continue
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| 154 | ;;
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| 155 | esac
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| 156 | fi
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| 157 |
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| 158 | if echo $file | grep 'CC_.*.run' >> $scriptlog 2>&1 && ! echo $file | grep .run.html >> $scriptlog 2>&1
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| 159 | then
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| 160 | echo "found run-file $filename" >> $scriptlog 2>&1
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| 161 |
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| 162 | fillrunlog=$copylogpath"/filldotrun-$filename-log.txt"
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| 163 | checkfillrun=`root -q -b $macrospath/filldotrun.C+\("\"$file\""\,kFALSE\) | tee $fillrunlog | intgrep`
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| 164 | if grep WARN $fillrunlog >/dev/null
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| 165 | then
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| 166 | printprocesslog "WARN found in logfile "$fillrunlog
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| 167 | fi
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| 168 |
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| 169 | if grep ERROR $fillrunlog >/dev/null
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| 170 | then
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| 171 | printprocesslog "ERROR found in logfile "$fillrunlog
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| 172 | fi
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| 173 |
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| 174 | case $checkfillrun in
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| 175 | 1) echo " checkfillrun=$checkfillrun -> everything ok " >> $scriptlog 2>&1
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| 176 | echo " -> insert date in SequenceBuildStatus for $date" >> $scriptlog 2>&1
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| 177 |
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| 178 | checkinsertdate=`root -q -b $macrospath/insertdate.C+\("\"$date\""\) | tee $copylogpath/insertdate-$date-log.txt | intgrep`
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| 179 |
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| 180 | case $checkinsertdate in
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| 181 | 1) echo "date inserted" >> $scriptlog 2>&1 ;;
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| 182 | *) echo " checkinsertdate=$checkinsertdate -> ERROR - insert date didn't work" >> $scriptlog 2>&1
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| 183 | printprocesslog "ERROR insertdate.C failed for $date"
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| 184 | continue
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| 185 | ;;
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| 186 | esac
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| 187 | echo " -> go on with moving file" >> $scriptlog 2>&1
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| 188 | ;;
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| 189 | *) echo " checkfillrun=$checkfillrun Error -> go on with next file" >> $scriptlog 2>&1
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| 190 | printprocesslog "ERROR filldotrun.C failed for $file"
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| 191 | continue
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| 192 | ;;
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| 193 | esac
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| 194 | fi
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| 195 |
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| 196 | if mv -v $file $newpath >> $scriptlog 2>&1
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| 197 | then
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| 198 | #add file to donelist
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| 199 | filename3=`echo $file | cut -c $char-999`
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| 200 | echo "$filename3 processed" >> $transdir/.processed
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| 201 | echo $filename" moved and added to .processed" >> $scriptlog 2>&1
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| 202 | else
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| 203 | echo $file" couldn't be moved!!!!!" >> $scriptlog 2>&1
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| 204 | printprocesslog "WARN moving of file $file didn't work"
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| 205 | fi
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| 206 |
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| 207 | else
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| 208 | #if the checksum for the file is not ok or the file was
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| 209 | #already processed (entry in donelist) -> go on with next file
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| 210 | echo $file": checksum not ok " >> $scriptlog 2>&1
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| 211 | printprocesslog "WARN checksum for file $file is not ok"
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| 212 | fi
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| 213 | done
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| 214 | done
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| 215 | fi
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| 216 |
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| 217 |
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| 218 | echo "remove empty directories: " >> $scriptlog 2>&1
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| 219 | rmdir -pv $transdir/*/* >> $scriptlog 2>&1
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| 220 |
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| 221 | rm -v $transdir/.check >> $scriptlog 2>&1
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| 222 |
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| 223 |
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| 224 | # second part of the script
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| 225 | #searching optical data files, inserting the information into the db and
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| 226 | #moving the files
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| 227 | file=""
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| 228 | printprocesslog "INFO processing optical files"
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| 229 | echo "processing optical files..." >> $scriptlog 2>&1
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| 230 | opticalfiles=`find $transdir/optical -regextype posix-egrep -regex "^$transdir/optical/20[0-9][0-9]_[0-1][0-9]_[0-3][0-9]_.*_[RV][_]?[12]?[.]instr$"`
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| 231 | for opticalfile in $opticalfiles
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| 232 | do
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| 233 | printprocesslog "INFO process "$opticalfile
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| 234 | file=`basename $opticalfile`
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| 235 | year=`echo $file | cut -c 0-4`
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| 236 | opticallogpath=$logpath/filloptical/$year
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| 237 | makedir $opticallogpath >> $scriptlog 2>&1
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| 238 | opticallogfile=$opticallogpath/filloptical-$file.log
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| 239 |
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| 240 | checkfilloptical=`root -q -b $macrospath/filloptical.C+\("\"$opticalfile\""\,kFALSE\) | tee $opticallogfile | intgrep`
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| 241 |
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| 242 | case $checkfilloptical in
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| 243 | 1) echo " checkfilloptical=$checkfilloptical -> everything ok -> go on with moving file" >> $scriptlog 2>&1
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| 244 | newdir=$subsystempath/optical/$year
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| 245 | newfile=$newdir/$file
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| 246 | makedir $newdir >> $scriptlog 2>&1
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| 247 |
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| 248 | if mv -v $opticalfile $newfile >> $scriptlog 2>&1
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| 249 | then
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| 250 | echo "moved "$opticalfile" successfully" >> $scriptlog 2>&1
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| 251 | printprocesslog "INFO moved "$opticalfile" successfully"
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| 252 | else
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| 253 | echo $opticalfile" couldn't be moved!!!!!" >> $scriptlog 2>&1
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| 254 | printprocesslog "WARN moving of file $opticalfile didn't work"
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| 255 | fi
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| 256 | ;;
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| 257 | 3) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: position of one object is missing in the database" >> $scriptlog 2>&1
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| 258 | printprocesslog "ERROR filloptical.C failed for $opticalfile: position of one object is missing in the database"
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| 259 | continue ;;
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| 260 | 4) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: telescope line with more or less than 2 arguments" >> $scriptlog 2>&1
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| 261 | printprocesslog "ERROR filloptical.C failed for $opticalfile: telescope line with more or less than 2 arguments"
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| 262 | continue ;;
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| 263 | 5) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: timestamp line with more or less than 4 arguments" >> $scriptlog 2>&1
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| 264 | printprocesslog "ERROR filloptical.C failed for $opticalfile: timestamp line with more or less than 4 arguments"
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| 265 | continue ;;
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| 266 | 6) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile: object line with more or less than 8 arguments" >> $scriptlog 2>&1
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| 267 | printprocesslog "ERROR filloptical.C failed for $opticalfile: object line with more or less than 8 arguments"
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| 268 | continue ;;
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| 269 | *) echo " checkfilloptical=$checkfilloptical - ERROR filloptical.C failed for $opticalfile -> go on with next file" >> $scriptlog 2>&1
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| 270 | printprocesslog "ERROR filloptical.C failed for $opticalfile (returned $checkfilloptical)"
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| 271 | continue ;;
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| 272 | esac
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| 273 | done
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| 274 |
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| 275 |
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| 276 | # third part of the script:
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| 277 | #update the catalog file magic_favorites.edb
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| 278 | printprocesslog "INFO processing new catalog files"
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| 279 | echo "Processing new catalog files" >> $scriptlog 2>&1
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| 280 | magfav=magic_favorites.edb #catalog filename
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| 281 | catalog=$setuppath/$magfav #current catalogfile
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| 282 | diff=/tmp/magic_favorites_diff #file to store difference
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| 283 |
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| 284 | #getting new catalogfiles
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| 285 | for (( i=0 ; i < 31 ; i++ ))
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| 286 | do
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| 287 | date=`date --date "-${i}day" +%Y/%m/%d`
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| 288 | path=$subsystempath/cc/$date
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| 289 | catfiles=$catfiles" "`find $path -name $magfav -newer $catalog`
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| 290 | done
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| 291 |
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| 292 | for catfile in ${catfiles[@]}
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| 293 | do
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| 294 | printprocesslog "INFO processing catalog file $catfile"
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| 295 | #write information into .diff
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| 296 | echo "diff $catfile $catalog" >| $diff
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| 297 | diff $catfile $catalog >> $diff
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| 298 | #getting differences
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| 299 | ins=`cat $diff | grep '>'` #what has been inserted
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| 300 | outs=`cat $diff | grep '<'` #what has been removed
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| 301 |
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| 302 | #check if lines have been inserted
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| 303 | if ! [ "$ins" == "" ]
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| 304 | then
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| 305 | echo "--> catalogfile: "$catfile >> $scriptlog 2>&1
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| 306 | echo "the following lines were added:" >> $scriptlog 2>&1
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| 307 | cat $diff | grep '>' >> $scriptlog 2>&1
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| 308 |
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| 309 | #check if lines have been removed
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| 310 | if ! [ "$outs" == "" ]
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| 311 | then
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| 312 | echo "the following lines have been removed" >> $scriptlog 2>&1
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| 313 | cat $diff | grep '<' >> $scriptlog 2>&1
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| 314 | echo " -> please check the file $catfile" >> $scriptlog 2>&1
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| 315 | #inform $adrs about removed lines
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| 316 | nail -s 'catalogfile - removed lines' $adrs < $diff
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| 317 | printprocesslog "NEWS catalog file: lines have been removed ($catfile)"
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| 318 | finish >> $scriptlog 2>&1
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| 319 | fi
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| 320 |
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| 321 | #getting date of new catalogfile from path
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| 322 | date=`echo $catfile | cut -d/ -f5-7 | sed -e 's/\///g'`
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| 323 |
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| 324 | oldcatalogpath=$setuppath/oldcatalogs
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| 325 | makedir $oldcatalogpath >> $scriptlog 2>&1
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| 326 | #rsync current catalogfile to directory with old catalogfiles including the date of the new catalogfile into the filename
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| 327 | if ! rsync -av $catalog $oldcatalogpath/$magfav.$date >> $scriptlog 2>&1
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| 328 | then
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| 329 | echo "could not do 'rsync -av $catalog $setuppath/oldcatalogs/$magfav.$date' -> exit" >> $scriptlog 2>&1
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| 330 | printprocesslog "ERROR rsync of catalog file ($catalog -> $oldcatalogpath/$magfav.$date) didn't work"
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| 331 | finish >> $scriptlog 2>&1
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| 332 | fi
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| 333 | #rsync new catalogfile to current catalogfile
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| 334 | if ! rsync -av $catfile $catalog >> $scriptlog 2>&1
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| 335 | then
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| 336 | echo "could not do 'rsync -av $catfile $catalog' -> exit" >> $scriptlog 2>&1
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| 337 | printprocesslog "ERROR rsync of catalog file ($catfile -> $catalog) didn't work"
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| 338 | finish >> $scriptlog 2>&1
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| 339 | fi
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| 340 | #inform $adrs about changes
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| 341 | echo "file has been rsynced sucessfully -> sending email" >> $scriptlog 2>&1
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| 342 | nail -s 'new catalogfile installed - new lines' $adrs < $diff
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| 343 | printprocesslog "NEWS there are new lines in the catalogfile (see $catalog)"
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| 344 | continue
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| 345 | fi
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| 346 | #check if lines have been removed
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| 347 | if ! [ "$outs" == "" ]
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| 348 | then
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| 349 | echo "the following lines have been removed" >> $scriptlog 2>&1
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| 350 | cat $diff | grep '<' >> $scriptlog 2>&1
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| 351 | echo " -> please check the file $catfile" >> $scriptlog 2>&1
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| 352 | #inform $adrs about removed lines
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| 353 | nail -s 'catalogfile - removed lines' $adrs < $diff
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| 354 | printprocesslog "NEWS catalog file: lines have been removed ($catfile)"
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| 355 | finish >> $scriptlog 2>&1
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| 356 | fi
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| 357 | # echo "nothing has changed ($catfile)" >> $scriptlog 2>&1
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| 358 | done
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| 359 |
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| 360 | finish >> $scriptlog 2>&1
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| 361 |
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