| 1 | #!/bin/sh
|
|---|
| 2 | #
|
|---|
| 3 | # ========================================================================
|
|---|
| 4 | #
|
|---|
| 5 | # *
|
|---|
| 6 | # * This file is part of MARS, the MAGIC Analysis and Reconstruction
|
|---|
| 7 | # * Software. It is distributed to you in the hope that it can be a useful
|
|---|
| 8 | # * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
|
|---|
| 9 | # * It is distributed WITHOUT ANY WARRANTY.
|
|---|
| 10 | # *
|
|---|
| 11 | # * Permission to use, copy, modify and distribute this software and its
|
|---|
| 12 | # * documentation for any purpose is hereby granted without fee,
|
|---|
| 13 | # * provided that the above copyright notice appear in all copies and
|
|---|
| 14 | # * that both that copyright notice and this permission notice appear
|
|---|
| 15 | # * in supporting documentation. It is provided "as is" without express
|
|---|
| 16 | # * or implied warranty.
|
|---|
| 17 | # *
|
|---|
| 18 | #
|
|---|
| 19 | #
|
|---|
| 20 | # Author(s): Daniela Dorner 05/2005 <mailto:dorner@astro.uni-wuerzburg.de>
|
|---|
| 21 | #
|
|---|
| 22 | # Copyright: MAGIC Software Development, 2000-2010
|
|---|
| 23 | #
|
|---|
| 24 | #
|
|---|
| 25 | # ========================================================================
|
|---|
| 26 | #
|
|---|
| 27 | # This a resource file for the scripts, in which the standard paths and
|
|---|
| 28 | # functions, which are needed more often are stored.
|
|---|
| 29 | # Only constant variables are stored here, changing variables are stored
|
|---|
| 30 | # in datacenter/scripts/setup
|
|---|
| 31 | #
|
|---|
| 32 |
|
|---|
| 33 | # check if script has been started with absolute path
|
|---|
| 34 | if ! dirname $0 | grep -E '^/' >/dev/null 2>&1
|
|---|
| 35 | then
|
|---|
| 36 | echo "Please start your script with an absolute path."
|
|---|
| 37 | exit
|
|---|
| 38 | fi
|
|---|
| 39 |
|
|---|
| 40 | if [ "$AUTOMATIONSETUP" = "" ]
|
|---|
| 41 | then
|
|---|
| 42 | echo "Please set the environment variable \$AUTOMATIONSETUP."
|
|---|
| 43 | exit
|
|---|
| 44 | fi
|
|---|
| 45 |
|
|---|
| 46 | # possible solution for $0 problem:
|
|---|
| 47 | # ${BASH_SOURCE[0]}
|
|---|
| 48 | # but has to be checked and tested more carefully
|
|---|
| 49 | # should solve at least problem with login-shell and with source
|
|---|
| 50 | source `dirname $0`/setup.$AUTOMATIONSETUP
|
|---|
| 51 |
|
|---|
| 52 | datetime=`date +%F-%H-%M-%S`
|
|---|
| 53 |
|
|---|
| 54 |
|
|---|
| 55 | # function to make sure that a directory is made
|
|---|
| 56 | function makedir()
|
|---|
| 57 | {
|
|---|
| 58 | if [ ! -d $@ ]
|
|---|
| 59 | then
|
|---|
| 60 | mkdir -pv $@
|
|---|
| 61 | if [ ! -d $@ ]
|
|---|
| 62 | then
|
|---|
| 63 | if ! [ "$processlog" = "" ]
|
|---|
| 64 | then
|
|---|
| 65 | echo `date +%F\ %T`" "`whoami`"@"$HOSTNAME" "`basename $0`"["$$"] ERROR could not make dir "$@ >> $processlog
|
|---|
| 66 | else
|
|---|
| 67 | echo "could not make dir "$@
|
|---|
| 68 | fi
|
|---|
| 69 | if ls $lockfile >/dev/null 2>&1
|
|---|
| 70 | then
|
|---|
| 71 | rm -v $lockfile
|
|---|
| 72 | fi
|
|---|
| 73 | exit
|
|---|
| 74 | fi
|
|---|
| 75 | fi
|
|---|
| 76 | }
|
|---|
| 77 |
|
|---|
| 78 | # logging paths for runlogs and processlog
|
|---|
| 79 | runlogpath=$logpath/run/`date +%Y/%m/%d`
|
|---|
| 80 | processlogpath=$logpath/processlog
|
|---|
| 81 | makedir $runlogpath
|
|---|
| 82 | makedir $processlogpath
|
|---|
| 83 | processlog=$processlogpath/process`date +%F`.log
|
|---|
| 84 |
|
|---|
| 85 | makedir $lockpath
|
|---|
| 86 |
|
|---|
| 87 |
|
|---|
| 88 | # function to provide proper logging in a single logfile ($processlog)
|
|---|
| 89 | function printprocesslog
|
|---|
| 90 | {
|
|---|
| 91 | makedir $processlogpath
|
|---|
| 92 | echo `date +%F\ %T`" "`whoami`"@"$HOSTNAME" "`basename $0`"["$$"] "$@ >> $processlog
|
|---|
| 93 | }
|
|---|
| 94 |
|
|---|
| 95 | # function to exit a script properly
|
|---|
| 96 | function finish()
|
|---|
| 97 | {
|
|---|
| 98 | if ! [ "$lockfile" = "" ] && ls $lockfile >/dev/null 2>&1
|
|---|
| 99 | then
|
|---|
| 100 | printprocesslog "DEBUG " `rm -v $lockfile`
|
|---|
| 101 | fi
|
|---|
| 102 | printprocesslog "DEBUG finished $0"
|
|---|
| 103 | exit
|
|---|
| 104 | }
|
|---|
| 105 |
|
|---|
| 106 |
|
|---|
| 107 | # set checkvalue to ok at the beginning of the scripts
|
|---|
| 108 | check="ok"
|
|---|
| 109 |
|
|---|
| 110 | # setup for jobmanager:
|
|---|
| 111 | # log files (can't be defined in script itself, as script can run longer
|
|---|
| 112 | # than one day
|
|---|
| 113 | jmerrorlog=$runlogpath/jobmanager-`whoami`-$HOSTNAME-$AUTOMATIONSETUP-`date +%F`-error.log
|
|---|
| 114 | jmscriptlog=$runlogpath/jobmanager-`whoami`-$HOSTNAME-$AUTOMATIONSETUP-`date +%F`.log
|
|---|
| 115 |
|
|---|
| 116 | # check if rc-files are available
|
|---|
| 117 | if ! ls $steps >/dev/null
|
|---|
| 118 | then
|
|---|
| 119 | echo "Can't find steps.rc ($steps)"
|
|---|
| 120 | finish
|
|---|
| 121 | fi
|
|---|
| 122 | if ! ls $sqlrc >/dev/null
|
|---|
| 123 | then
|
|---|
| 124 | echo "Can't find sql.rc ($sqlrc)"
|
|---|
| 125 | finish
|
|---|
| 126 | fi
|
|---|
| 127 |
|
|---|
| 128 | # resetting values for jobmanager
|
|---|
| 129 | pno=0
|
|---|
| 130 | totalpno=0
|
|---|
| 131 | running=0
|
|---|
| 132 | queued=0
|
|---|
| 133 | runningscript=0
|
|---|
| 134 | queuedscript=0
|
|---|
| 135 | stillinqueue=0
|
|---|
| 136 |
|
|---|
| 137 |
|
|---|
| 138 | # alias (we cannot check the beginning of the line due to
|
|---|
| 139 | # color codes in filldotraw.C)
|
|---|
| 140 | alias 'intgrep'='grep -E -o \\\(int\\\)[0-9]+$ | grep -E -o [0-9]+'
|
|---|
| 141 |
|
|---|
| 142 |
|
|---|
| 143 | # in the following the functions, which are needed by several scripts, are
|
|---|
| 144 | # defined
|
|---|
| 145 |
|
|---|
| 146 | # function to check if a process is already locked
|
|---|
| 147 | # command line option can be used to execute something, e.g. 'continue'
|
|---|
| 148 | function checklock()
|
|---|
| 149 | {
|
|---|
| 150 | if ! echo `date +%F\ %T`" "`whoami`"@"$HOSTNAME" "`basename $0`"["$$"] "`uname -a` > $lockfile 2>/dev/null
|
|---|
| 151 | then
|
|---|
| 152 | printprocesslog "WARN lockfile $lockfile exists"
|
|---|
| 153 | $@
|
|---|
| 154 | exit
|
|---|
| 155 | else
|
|---|
| 156 | printprocesslog "DEBUG created lockfile $lockfile"
|
|---|
| 157 | fi
|
|---|
| 158 | }
|
|---|
| 159 |
|
|---|
| 160 | # print the current status values
|
|---|
| 161 | function printstatusvalues()
|
|---|
| 162 | {
|
|---|
| 163 | echo "the current values are:"
|
|---|
| 164 | echo " starttime=$starttime"
|
|---|
| 165 | echo " stoptime=$stoptime"
|
|---|
| 166 | echo " returncode=$returncode"
|
|---|
| 167 | echo "-- check: -$check-"
|
|---|
| 168 | echo ""
|
|---|
| 169 | }
|
|---|
| 170 |
|
|---|
| 171 | # get the db-setup from the sql.rc
|
|---|
| 172 | function getdbsetup()
|
|---|
| 173 | {
|
|---|
| 174 | db=`grep Database $sqlrc | grep -v '#' | sed -e 's/Database: //' -e 's/ //g'`
|
|---|
| 175 | pw=`grep Password $sqlrc | grep -v '#' | sed -e 's/Password: //' -e 's/ //g'`
|
|---|
| 176 | us=`grep User $sqlrc | grep -v '#' | sed -e 's/User: //' -e 's/ //g'`
|
|---|
| 177 | ho=`grep URL $sqlrc | grep -v '#' | sed -e 's/ //g' -e 's/URL:mysql:\/\///'`
|
|---|
| 178 | # echo "setup: "
|
|---|
| 179 | # echo " db: "$db
|
|---|
| 180 | # echo " pw: "$pw
|
|---|
| 181 | # echo " us: "$us
|
|---|
| 182 | # echo " ho: "$ho
|
|---|
| 183 | }
|
|---|
| 184 |
|
|---|
| 185 | # function to get information from the setupfile $steps
|
|---|
| 186 | function getfromsetup()
|
|---|
| 187 | {
|
|---|
| 188 | grep $1"[.]"$2":" $steps | grep -v '#' | sed -e "s/$1[.]$2://"
|
|---|
| 189 | }
|
|---|
| 190 |
|
|---|
| 191 | # function to get the needed information from the dependencies-file steps.rc
|
|---|
| 192 | function getstepinfo()
|
|---|
| 193 | {
|
|---|
| 194 | getdbsetup
|
|---|
| 195 | needs=( `getfromsetup $step "Needs"` )
|
|---|
| 196 | noderestricted=`getfromsetup $step "NodeRestricted"`
|
|---|
| 197 | prims=( `getfromsetup $step "Primaries"` )
|
|---|
| 198 | maintable=`getfromsetup $step "MainTable" | sed -e "s/\ //g"`
|
|---|
| 199 | # echo " maintable: "$maintable
|
|---|
| 200 | # echo " needs: "${needs[@]}
|
|---|
| 201 | # echo " noderestricted: "$noderestricted
|
|---|
| 202 | # echo " prims: "${prims[@]}
|
|---|
| 203 | }
|
|---|
| 204 |
|
|---|
| 205 | # function to get the joins needed for the get/set status queries
|
|---|
| 206 | function getalljoins()
|
|---|
| 207 | {
|
|---|
| 208 | # add table
|
|---|
| 209 | query=$query" "$maintable"Status"
|
|---|
| 210 | # add special join
|
|---|
| 211 | query=$query" "`getfromsetup $maintable "SpecialJoin"`
|
|---|
| 212 | # add join for step unless step is the same as maintable
|
|---|
| 213 | if ! [ "$step" = "$maintable" ]
|
|---|
| 214 | then
|
|---|
| 215 | query=$query" LEFT JOIN "$step"Status USING("${prims[@]}") "
|
|---|
| 216 | fi
|
|---|
| 217 | # add joins for influences or needs
|
|---|
| 218 | for otherstep in ${othersteps[@]}
|
|---|
| 219 | do
|
|---|
| 220 | if ! [ "$otherstep" = "$maintable" ]
|
|---|
| 221 | then
|
|---|
| 222 | query=$query" LEFT JOIN "$otherstep"Status USING("`getfromsetup $otherstep "Primaries"`") "
|
|---|
| 223 | fi
|
|---|
| 224 | done
|
|---|
| 225 | }
|
|---|
| 226 |
|
|---|
| 227 | # function to create the middle part of a query
|
|---|
| 228 | # which is identical for the functions getstatus() and gettodo()
|
|---|
| 229 | function getstatusquery()
|
|---|
| 230 | {
|
|---|
| 231 | # add from which table the information is queried
|
|---|
| 232 | query=$query" FROM "
|
|---|
| 233 | othersteps=${needs[@]}
|
|---|
| 234 | getalljoins
|
|---|
| 235 | # add condition
|
|---|
| 236 | query=$query" WHERE "
|
|---|
| 237 | # add condition for step, i.e. step is not yet done
|
|---|
| 238 | query=$query" ISNULL("$step"Status.fStartTime) "
|
|---|
| 239 | query=$query" AND ISNULL("$step"Status.fStopTime) "
|
|---|
| 240 | query=$query" AND ISNULL("$step"Status.fReturnCode) "
|
|---|
| 241 | # add requirement for production host in case it is needed
|
|---|
| 242 | if [ "$1 " != " " ]
|
|---|
| 243 | then
|
|---|
| 244 | query=$query" AND fProductionHostKEY=$2 "
|
|---|
| 245 | fi
|
|---|
| 246 | if ! echo $query | grep UPDATE >/dev/null 2>&1
|
|---|
| 247 | then
|
|---|
| 248 | query=$query" GROUP BY "${prims[@]}
|
|---|
| 249 | fi
|
|---|
| 250 | # add condition for needs, i.e. that step is done
|
|---|
| 251 | for (( k=0 ; k < ${#needs[@]} ; k++ ))
|
|---|
| 252 | do
|
|---|
| 253 | if [ $k -eq 0 ]
|
|---|
| 254 | then
|
|---|
| 255 | query=$query" HAVING "
|
|---|
| 256 | else
|
|---|
| 257 | query=$query" AND "
|
|---|
| 258 | fi
|
|---|
| 259 | query=$query" COUNT(*)=COUNT(IF("
|
|---|
| 260 | query=$query" NOT ISNULL("${needs[$k]}"Status.fStartTime) "
|
|---|
| 261 | query=$query" AND NOT ISNULL("${needs[$k]}"Status.fStopTime) "
|
|---|
| 262 | query=$query" AND ISNULL("${needs[$k]}"Status.fReturnCode) "
|
|---|
| 263 | query=$query" , 1, NULL)) "
|
|---|
| 264 | done
|
|---|
| 265 | }
|
|---|
| 266 |
|
|---|
| 267 | # function to get todolist
|
|---|
| 268 | # returns the next or the list of next steps
|
|---|
| 269 | function gettodo()
|
|---|
| 270 | {
|
|---|
| 271 | # reset the variable for the number of the next step
|
|---|
| 272 | process=
|
|---|
| 273 | printprocesslog "DEBUG getting todo for step $step..."
|
|---|
| 274 | getstepinfo
|
|---|
| 275 | # get query
|
|---|
| 276 | query=" SELECT "${prims[@]}
|
|---|
| 277 | getstatusquery $2
|
|---|
| 278 | # order by priority to the the number of the next step to be done
|
|---|
| 279 | query=$query" ORDER BY "$step"Status.fPriority desc "
|
|---|
| 280 | # add limitation in case only one or a limited number of
|
|---|
| 281 | # processes should be executed
|
|---|
| 282 | if [ "$1 " != " " ]
|
|---|
| 283 | then
|
|---|
| 284 | query=$query" limit 0, $1 "
|
|---|
| 285 | fi
|
|---|
| 286 | # print query
|
|---|
| 287 | printprocesslog "DEBUG gettodo for step $step QUERY: "$query
|
|---|
| 288 | # execute query
|
|---|
| 289 | if ! process=`mysql -s -u $us --password=$pw --host=$ho $db -e " $query "`
|
|---|
| 290 | then
|
|---|
| 291 | printprocesslog "ERROR could not query processes from db (program: $program, function gettodo)"
|
|---|
| 292 | finish
|
|---|
| 293 | fi
|
|---|
| 294 | # get numbers of next step from mysql result
|
|---|
| 295 | if [ "$process" = "" ]
|
|---|
| 296 | then
|
|---|
| 297 | printprocesslog "DEBUG => nothing to do"
|
|---|
| 298 | finish
|
|---|
| 299 | else
|
|---|
| 300 | primaries=( $process )
|
|---|
| 301 | num=`expr ${#primaries[@]} / ${#prims[@]} `
|
|---|
| 302 | fi
|
|---|
| 303 | }
|
|---|
| 304 |
|
|---|
| 305 | # function to get the number of processes which still have to be done
|
|---|
| 306 | function getstatus()
|
|---|
| 307 | {
|
|---|
| 308 | # reset the variable for the number of steps to be done
|
|---|
| 309 | numproc=0
|
|---|
| 310 | getstepinfo
|
|---|
| 311 | # get query
|
|---|
| 312 | query=" SELECT "${prims[@]}
|
|---|
| 313 | getstatusquery $1
|
|---|
| 314 | # print query
|
|---|
| 315 | printprocesslog "DEBUG getstatus for step $step QUERY: "$query
|
|---|
| 316 | # execute query
|
|---|
| 317 | if ! numproc=`mysql -s -u $us --password=$pw --host=$ho $db -e " $query " | wc -l`
|
|---|
| 318 | then
|
|---|
| 319 | printprocesslog "ERROR could not query number of processes from db (program: $program, function getstatus)"
|
|---|
| 320 | echo `date +%F\ %T`" ERROR could not query number of processes from db (program: $program, function getstatus)"
|
|---|
| 321 | continue
|
|---|
| 322 | fi
|
|---|
| 323 | }
|
|---|
| 324 |
|
|---|
| 325 | # function to set status of a process in the db
|
|---|
| 326 | function setstatus()
|
|---|
| 327 | {
|
|---|
| 328 | # remark:
|
|---|
| 329 | # this function does not include the 'Default' flag
|
|---|
| 330 | # for resetting steps
|
|---|
| 331 |
|
|---|
| 332 | # for dowebplots (there are steps which have no entry in the DB)
|
|---|
| 333 | if [ "$step" = "no" ]
|
|---|
| 334 | then
|
|---|
| 335 | return
|
|---|
| 336 | fi
|
|---|
| 337 |
|
|---|
| 338 | # reset status values
|
|---|
| 339 | starttime=NULL
|
|---|
| 340 | stoptime=NULL
|
|---|
| 341 | returncode=NULL
|
|---|
| 342 | # evaluate the status values
|
|---|
| 343 | case $@ in
|
|---|
| 344 | start) printprocesslog "DEBUG setstatus start"
|
|---|
| 345 | starttime="Now()"
|
|---|
| 346 | ;;
|
|---|
| 347 | stop) case $check in
|
|---|
| 348 | ok) printprocesslog "DEBUB setstatus stop - ok"
|
|---|
| 349 | starttime=noreset
|
|---|
| 350 | stoptime="Now()"
|
|---|
| 351 | ;;
|
|---|
| 352 | no) printprocesslog "DEBUG setstatus stop - nothing new"
|
|---|
| 353 | check="ok"
|
|---|
| 354 | ;;
|
|---|
| 355 | *) printprocesslog "DEBUG setstatus stop - failed"
|
|---|
| 356 | starttime=noreset
|
|---|
| 357 | stoptime="Now()"
|
|---|
| 358 | if [ "$check" == "" ]
|
|---|
| 359 | then
|
|---|
| 360 | returncode=1
|
|---|
| 361 | else
|
|---|
| 362 | returncode=$check
|
|---|
| 363 | fi
|
|---|
| 364 | check="ok"
|
|---|
| 365 | ;;
|
|---|
| 366 | esac
|
|---|
| 367 | ;;
|
|---|
| 368 | *) printprocesslog "ERROR function setstatus got wrong variable"
|
|---|
| 369 | finish
|
|---|
| 370 | ;;
|
|---|
| 371 | esac
|
|---|
| 372 |
|
|---|
| 373 | # get
|
|---|
| 374 | getstepinfo
|
|---|
| 375 |
|
|---|
| 376 | # get the influences from the steps.rc by evaluating the needs of all steps
|
|---|
| 377 | othersteps=`grep $step $steps | grep "Needs" | grep -v "$step[.]Needs" | cut -d'.' -f1`
|
|---|
| 378 |
|
|---|
| 379 | # get query
|
|---|
| 380 | query=" UPDATE "
|
|---|
| 381 | getalljoins
|
|---|
| 382 | # set the status values according to the new status of the step
|
|---|
| 383 | query=$query" SET "
|
|---|
| 384 | if ! [ "$starttime" = "noreset" ]
|
|---|
| 385 | then
|
|---|
| 386 | query=$query" "$step"Status.fStartTime=$starttime, "
|
|---|
| 387 | fi
|
|---|
| 388 | query=$query" "$step"Status.fStopTime=$stoptime, "$step"Status.fReturnCode=$returncode "
|
|---|
| 389 | # set also the status values of the influenced steps
|
|---|
| 390 | for influence in $influences
|
|---|
| 391 | do
|
|---|
| 392 | query=$query", "$influence"Status.fStartTime=NULL "
|
|---|
| 393 | query=$query", "$influence"Status.fStopTime=NULL "
|
|---|
| 394 | query=$query", "$influence"Status.fReturnCode=NULL "
|
|---|
| 395 | done
|
|---|
| 396 | # give the condition for which step the status values have to be set
|
|---|
| 397 | query=$query" WHERE "
|
|---|
| 398 | if [ "$s" = "" ]
|
|---|
| 399 | then
|
|---|
| 400 | s=0
|
|---|
| 401 | fi
|
|---|
| 402 | query=$query" "$step"Status."`echo ${prims[0]} | sed -e 's/,//g'`"='${primaries[$s*${#prims[@]}]}'"
|
|---|
| 403 | for (( j=1 ; j < ${#prims[@]} ; j++ ))
|
|---|
| 404 | do
|
|---|
| 405 | query=$query" AND "$step"Status."`echo ${prims[$j]} | sed -e 's/,//g'`"='${primaries[$s*${#prims[@]}+$j]}' "
|
|---|
| 406 | done
|
|---|
| 407 | # print query
|
|---|
| 408 | printprocesslog "DEBUG setstatus for step $step QUERY: "$query
|
|---|
| 409 | # execute query
|
|---|
| 410 | if ! mysql -s -u $us --password=$pw --host=$ho $db -e " $query "
|
|---|
| 411 | then
|
|---|
| 412 | printprocesslog "ERROR could not set status in db (program: $program, function setstatus)"
|
|---|
| 413 | finish
|
|---|
| 414 | fi
|
|---|
| 415 | }
|
|---|
| 416 |
|
|---|
| 417 | # function to send a mysql query
|
|---|
| 418 | function sendquery()
|
|---|
| 419 | {
|
|---|
| 420 | getdbsetup
|
|---|
| 421 | printprocesslog "DEBUG sendquery QUERY: "$query
|
|---|
| 422 | if ! val=`mysql -s -u $us --password=$pw --host=$ho $db -e " $query "`
|
|---|
| 423 | then
|
|---|
| 424 | printprocesslog "ERROR could not query db (program: $program, function sendquery)"
|
|---|
| 425 | return 1
|
|---|
| 426 | fi
|
|---|
| 427 | if [ "$val" = "NULL" ]
|
|---|
| 428 | then
|
|---|
| 429 | val=
|
|---|
| 430 | fi
|
|---|
| 431 | echo $val
|
|---|
| 432 | return 0
|
|---|
| 433 | }
|
|---|
| 434 |
|
|---|
