| 1 | #include "MLogManip.h"
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| 2 |
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| 3 | /*****************************************************************
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| 4 |
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| 5 | STAR -- STandard Analysis and Reconstruction
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| 6 |
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| 7 | datafile:
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| 8 | A calibarted root file which came out of callist, e.g.
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| 9 | 20170727_006_Y.root or
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| 10 | 00000015.003_Y_MonteCarlo003_Events.root
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| 11 |
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| 12 | lvl1, lvl2:
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| 13 | Lower (1) and higher (2) cleaning level
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| 14 |
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| 15 | outpath:
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| 16 | The path to which the output files are written
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| 17 |
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| 18 |
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| 19 | To run the macro from the command line (assuming you are in a directory
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| 20 | Mars/build where you have built your Mars environment) you can do
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| 21 |
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| 22 | root ../hawc/star.C\(\"00000015.003_Y_MonteCarlo003_Events.root\"\)
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| 23 |
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| 24 | or from within root
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| 25 |
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| 26 | [0] .x ../hawc/star.C("00000015.003_Y_MonteCarlo003_Events.root")
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| 27 |
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| 28 | ******************************************************************/
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| 29 | int star(const char *datafile, const char *outpath=".")
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| 30 | {
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| 31 | // minimum number of pixels that can make an island
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| 32 | int mincount = 0;
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| 33 |
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| 34 | // minimum size for a valid island
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| 35 | double minsize = 25;
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| 36 |
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| 37 | // The delta t [ns/deg] for the image cleaning
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| 38 | double deltat = 2.5;
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| 39 |
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| 40 | // --------------------------------------------------------
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| 41 |
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| 42 | // Define the binning for the plots
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| 43 | MBinning binse( 40, 10 , 1e4, "BinningSize", "log");
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| 44 | MBinning bins1( 36, -90, 90, "BinningAlpha");
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| 45 | MBinning bins3( 67, -0.005, 0.665, "BinningTheta", "asin");
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| 46 | MBinning bins4( 40, 0, 8, "BinningDist");
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| 47 | MBinning bins5( 30, 0, 6, "BinningWidth");
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| 48 | MBinning bins6( 30, 0, 6, "BinningLength");
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| 49 | MBinning bins7( 31, -6, 6, "BinningM3Long");
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| 50 | MBinning bins8( 31, -6, 6, "BinningM3Trans");
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| 51 | MBinning bins9( 31, -6, 6, "BinningAsym");
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| 52 | MBinning binsA( 100, 0, 10, "BinningArea");
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| 53 | MBinning binsT( 30, 0, 6, "BinningTimeSpread");
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| 54 |
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| 55 |
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| 56 | // ------------------------------------------------------
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| 57 |
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| 58 | gLog.Separator("Star");
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| 59 | gLog << all << "Calculate image parameters of sequence ";
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| 60 | gLog << datafile << endl;
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| 61 | gLog << endl;
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| 62 |
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| 63 | // ------------------------------------------------------
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| 64 |
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| 65 | gLog << "Outpath: " << outpath << endl;
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| 66 |
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| 67 | // TString fname = gSystem->ConcatFileName(outpath, gSystem->BaseName(datafile));
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| 68 | // fname.ReplaceAll("_C_", "_I_");
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| 69 | // gSystem->ExpandPathName(fname);
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| 70 |
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| 71 | gLog.Separator();
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| 72 |
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| 73 | // ---------------------------------------------------------
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| 74 |
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| 75 | // Allocate/open the status display
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| 76 | MStatusDisplay *d = new MStatusDisplay;
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| 77 |
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| 78 | // Instantiate the list of tasks
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| 79 | MTaskList tlist;
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| 80 |
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| 81 | // Instantiate the list of parameter containers
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| 82 | MParList plist2;
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| 83 | plist2.AddToList(&tlist);
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| 84 |
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| 85 | // Fill it with the binnings
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| 86 | plist2.AddToList(&binse);
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| 87 | plist2.AddToList(&bins1);
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| 88 | plist2.AddToList(&bins3);
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| 89 | plist2.AddToList(&bins4);
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| 90 | plist2.AddToList(&bins5);
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| 91 | plist2.AddToList(&bins6);
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| 92 | plist2.AddToList(&bins7);
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| 93 | plist2.AddToList(&bins8);
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| 94 | plist2.AddToList(&bins9);
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| 95 | plist2.AddToList(&binsA);
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| 96 | plist2.AddToList(&binsT);
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| 97 |
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| 98 | // Instatiate the event loop
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| 99 | MEvtLoop loop;
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| 100 | loop.SetDisplay(d);
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| 101 | loop.SetParList(&plist2);
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| 102 |
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| 103 | MDirIter files(datafile);
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| 104 |
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| 105 | // Instantiate the reading task
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| 106 | // You can use
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| 107 | // read.AddFiles("*_C.root")
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| 108 | // for example to read more than one file at once
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| 109 | MReadMarsFile read("Events");
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| 110 | read.DisableAutoScheme();
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| 111 | read.AddFiles(files);
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| 112 |
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| 113 | // Instantiate the task which takes care of the size of all containers
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| 114 | MGeomApply apply;
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| 115 |
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| 116 | // Instantiate the image cleaning
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| 117 |
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| 118 | // This is the most simple image cleaning possible, standard
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| 119 | // tail cut based on absolute amplitudes
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| 120 | // MImgCleanStd clean(lvl1, lvl2);
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| 121 | // clean.SetMethod(MImgCleanStd::kAbsolute);
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| 122 | // clean.SetPostCleanType(3);
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| 123 |
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| 124 | // Instantiate the image cleaning as described in the TRAC
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| 125 | MImgCleanTime clean;
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| 126 | clean.SetMinCount(mincount);
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| 127 | clean.SetMinSize(minsize);
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| 128 | clean.SetDeltaT(deltat);
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| 129 |
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| 130 | // Instantiate the calculation of the image parameters
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| 131 | MHillasCalc hcalc;
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| 132 | hcalc.Disable(MHillasCalc::kCalcConc);
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| 133 |
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| 134 | // Instantiate a plot for the rate after cleaning
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| 135 | MH3 hrate("MRawRunHeader.GetFileID"/*, "MRawEvtHeader.GetTriggerID"*/);
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| 136 | hrate.SetWeight("1./TMath::Max(MRawRunHeader.GetRunLength,1.)");
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| 137 | hrate.SetName("Rate");
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| 138 | hrate.SetTitle("Event rate after cleaning;File Id;Event Rate [Hz];");
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| 139 | hrate.InitLabels(MH3::kLabelsX);
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| 140 | hrate.GetHist().SetMinimum(0);
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| 141 |
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| 142 | // Instantiate the task to fill the rate plot
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| 143 | MFillH fillR(&hrate, "", "FillRate");
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| 144 |
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| 145 | // Instantiate the camera displays to be filled
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| 146 | MHCamEvent evtC1(0, "Cleaned", "Average signal after Cleaning;;S [phe]");
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| 147 | MHCamEvent evtC2(0, "UsedPix", "Fraction of Events in which Pixels are used;;Fraction");
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| 148 | MHCamEvent evtC3(8, "PulsePos", "Pulse Position of signal after cleaning;;T [ns]");
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| 149 | evtC1.SetErrorSpread(kFALSE);
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| 150 | evtC2.SetErrorSpread(kFALSE);
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| 151 | evtC2.SetThreshold(0);
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| 152 |
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| 153 | // Instantiate tasks to fill the camera displays
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| 154 | MFillH fillC1(&evtC1, "MSignalCam", "FillSignalCam");
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| 155 | MFillH fillC2(&evtC2, "MSignalCam", "FillCntUsedPixels");
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| 156 | MFillH fillC3(&evtC3, "MSignalCam", "FillPulsePos");
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| 157 |
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| 158 | // Instantiate tasks to fill image parameter histograms
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| 159 | MFillH fillD1("MHHillas", "MHillas", "FillHillas");
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| 160 | MFillH fillD2("MHHillasExt", "", "FillHillasExt");
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| 161 | MFillH fillD3("MHHillasSrc", "MHillasSrc", "FillHillasSrc");
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| 162 | MFillH fillD4("MHImagePar", "MImagePar", "FillImagePar");
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| 163 | MFillH fillD5("MHNewImagePar", "MNewImagePar", "FillNewImagePar");
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| 164 | MFillH fillD6("MHVsSize", "MHillasSrc", "FillVsSize");
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| 165 |
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| 166 | // Instantiate an example for a user defined plot
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| 167 | MH3 halpha("MHillasSrc.fDist*MGeomCam.fConvMm2Deg", "fabs(MHillasSrc.fAlpha)");
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| 168 | halpha.SetName("AvsD;Dist;Alpha");
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| 169 |
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| 170 | // Instantiate a task to fill that plot
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| 171 | MFillH filla(&halpha);
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| 172 | filla.SetNameTab("AvsD");
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| 173 | filla.SetDrawOption("colz");
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| 174 |
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| 175 | // This is an alternative if more than one file should be read in a single loop
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| 176 | // In this case the output file name of each file is created with this rule
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| 177 | // from the input file name. Note that the filename of the output file
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| 178 | // with the status display must then be explicitly given.
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| 179 | //
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| 180 | //const TString fname(Form("s/([0-9]+_[0-9]+)[.]_C.root$/%s\\/$1_I.root/",
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| 181 | // MJob::Esc(outpath).Data()));
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| 182 | //MWriteRootFile write5(2, fname, "RECREATE", "Image parameters");
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| 183 |
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| 184 | const TString rule(Form("s/([0-9]+)([._])([0-9]+)(_Y)?([_].*)?[.]root$/%s\\/$1$2$3_I$5.root/",
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| 185 | MJob:: Esc(outpath).Data()));
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| 186 |
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| 187 | // Instantiate writing the file
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| 188 | MWriteRootFile write(2, rule, "RECREATE", "Image parameters");
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| 189 | write.AddContainer("MTime", "Events");
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| 190 | write.AddContainer("MHillas", "Events");
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| 191 | write.AddContainer("MHillasExt", "Events");
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| 192 | write.AddContainer("MHillasSrc", "Events");
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| 193 | write.AddContainer("MImagePar", "Events");
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| 194 | write.AddContainer("MNewImagePar", "Events");
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| 195 | write.AddContainer("MRawEvtHeader", "Events");
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| 196 | write.AddContainer("MSoftwareTrigger","Events");
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| 197 | write.AddContainer("MRawRunHeader", "RunHeaders");
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| 198 | write.AddContainer("MGeomCam", "RunHeaders");
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| 199 |
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| 200 | write.AddContainer("MMcCorsikaRunHeader", "RunHeaders", kFALSE);
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| 201 | write.AddContainer("MCorsikaRunHeader", "RunHeaders", kFALSE);
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| 202 | write.AddContainer("MMcRunHeader", "RunHeaders", kFALSE);
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| 203 | write.AddContainer("MCorsikaEvtHeader", "Events", kFALSE);
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| 204 | write.AddContainer("MMcEvt", "Events", kFALSE);
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| 205 | write.AddContainer("IncidentAngle", "Events", kFALSE);
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| 206 | write.AddContainer("MPointingPos", "Events", kFALSE);
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| 207 | write.AddContainer("MTime", "Events", kFALSE);
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| 208 | write.AddContainer("MRawBoardsFACT", "Events", kFALSE);
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| 209 | write.AddContainer("MSrcPosCam", "Events", kFALSE);
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| 210 |
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| 211 | // Setup the task list
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| 212 | tlist.AddToList(&read);
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| 213 | tlist.AddToList(&apply);
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| 214 | tlist.AddToList(&clean);
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| 215 | tlist.AddToList(&hcalc);
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| 216 | tlist.AddToList(&fillC1);
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| 217 | tlist.AddToList(&fillC2);
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| 218 | tlist.AddToList(&fillC3);
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| 219 | tlist.AddToList(&fillR);
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| 220 | tlist.AddToList(&fillD1);
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| 221 | tlist.AddToList(&fillD2);
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| 222 | tlist.AddToList(&fillD3);
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| 223 | tlist.AddToList(&fillD4);
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| 224 | tlist.AddToList(&fillD5);
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| 225 | tlist.AddToList(&fillD6);
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| 226 | tlist.AddToList(&filla);
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| 227 | tlist.AddToList(&write);
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| 228 |
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| 229 | // Run the eventloop
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| 230 | if (!loop.Eventloop())
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| 231 | return 3;
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| 232 |
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| 233 | // Check if the display was closed (deleted) by the user
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| 234 | if (!loop.GetDisplay())
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| 235 | return 4;
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| 236 |
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| 237 | // ============================================================
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| 238 |
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| 239 | TString fname = write.GetFileName();
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| 240 | fname.ReplaceAll(".root", "-display.root");
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| 241 |
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| 242 | // Write the status display to the file
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| 243 | TString title = "-- Image parameters [";
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| 244 | title += datafile;
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| 245 | title += "] --";
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| 246 | d->SetTitle(title, kFALSE);
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| 247 |
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| 248 | d->SaveAsRoot(fname);
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| 249 |
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| 250 | return 0;
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| 251 | }
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