Index: /trunk/FACT++/Makefile.am
===================================================================
--- /trunk/FACT++/Makefile.am	(revision 14650)
+++ /trunk/FACT++/Makefile.am	(revision 14651)
@@ -538,5 +538,5 @@
 
 if HAS_JSDOC
-MAN_TARGETS += jsdoc
+JAVA_SCRIPT_DOC=jsdoc
 endif
 
@@ -556,5 +556,5 @@
 
 
-man: $(MAN_TARGETS) doxygen-doc
+man: $(MAN_TARGETS) $(JAVA_SCRIPT_DOC) doxygen-run
 
 diff:
Index: /trunk/FACT++/Makefile.in
===================================================================
--- /trunk/FACT++/Makefile.in	(revision 14650)
+++ /trunk/FACT++/Makefile.in	(revision 14651)
@@ -86,5 +86,4 @@
 @HAS_GROFF_TRUE@@HAS_PS2PDF_TRUE@am__append_16 = $(dist_man1_MANS:.man=.pdf)
 @HAS_GROFF_TRUE@@HAS_PS2PDF_TRUE@am__append_17 = $(dist_man1_MANS:.man=.pdf)
-@HAS_JSDOC_TRUE@am__append_18 = jsdoc
 subdir = .
 ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
@@ -1138,6 +1137,6 @@
 
 #-------------------------------------------------------------------------
-MAN_TARGETS = $(dist_man1_MANS) $(am__append_12) $(am__append_15) \
-	$(am__append_18)
+MAN_TARGETS = $(dist_man1_MANS) $(am__append_12) $(am__append_15)
+@HAS_JSDOC_TRUE@JAVA_SCRIPT_DOC = jsdoc
 all: $(BUILT_SOURCES)
 	$(MAKE) $(AM_MAKEFLAGS) all-am
@@ -2768,6 +2767,5 @@
 @DX_COND_doc_TRUE@@DX_COND_pdf_TRUE@		$(DX_PDFLATEX) refman.tex; \
 @DX_COND_doc_TRUE@@DX_COND_pdf_TRUE@		countdown=`expr $$countdown - 1`; \
-@DX_COND_doc_TRUE@@DX_COND_pdf_TRUE@    	done; \
-@DX_COND_doc_TRUE@@DX_COND_pdf_TRUE@	mv refman.pdf ../@PACKAGE@.pdf
+@DX_COND_doc_TRUE@@DX_COND_pdf_TRUE@    	done;
 
 @DX_COND_doc_TRUE@.PHONY: doxygen-run doxygen-doc $(DX_PS_GOAL) $(DX_PDF_GOAL)
@@ -2806,5 +2804,5 @@
 	$(AM_V_GEN)jsdoc -r=2 -d=www/dimctrl scripts | grep -v ^java
 
-man: $(MAN_TARGETS) doxygen-doc
+man: $(MAN_TARGETS) $(JAVA_SCRIPT_DOC) doxygen-run
 
 diff: