Index: /trunk/Mars/fact/analysis/callisto.C =================================================================== --- /trunk/Mars/fact/analysis/callisto.C (revision 15233) +++ /trunk/Mars/fact/analysis/callisto.C (revision 15233) @@ -0,0 +1,949 @@ +int callisto(const char *seqfile="seq/2012/01/23/20120123_023.seq", const char *outpath = "output", bool use_delays=true) +{ + // ====================================================== + + // true: Display correctly mapped pixels in the camera displays + // but the value-vs-index plot is in software/spiral indices + // false: Display pixels in hardware/linear indices, + // but the order is the camera display is distorted + bool usemap = true; + + // map file to use (get that from La Palma!) + const char *map = usemap ? "/scratch_nfs/FACTmap111030.txt" : NULL; + + Bool_t maximum = kTRUE; + + const char *lp_template = maximum ? + "template-lp-extractor-maximum.root" : + "template-lp-extractor-leading-edge.root"; + + const char *pulse_template = "template-pulse.root"; + + // ------------------------------------------------------ + + // Calib: 51 / 90 / 197 (20% TH) + // Data: 52 / 64 / 104 (20% TH) + + // Extraction range in slices. It will always(!) contain the full range + // of integration + const int first_slice = 20; // 10ns + const int last_slice = 250; // 125ns + + // Note that rise and fall time mean different things whether you use IntegralFixed or IntegraRel: + // + // IntegralFixed: + // * fRiseTime: Number of slices left from arrival time + // * fFallTime: Number of slices right from arrival time + // IntegralRel: + // * fRiseTime: Number of slices left from maximum time + // * fFallTime: Number of slices right from maximum time + // + const int rise_time_cal = maximum ? 40 : 10; // was 13; 5ns + const int fall_time_cal = maximum ? 120 : 160; // was 23; 80ns + + const int rise_time_dat = maximum ? 10 : 2; // was 13; was 10; 1ns + const int fall_time_dat = maximum ? 40 : 48; // was 23; was 40; 24ns + + // Extraction type: Extract integral and half leading edge + + const int type = maximum ? (MExtralgoSpline::kIntegralRel) : (MExtralgoSpline::kIntegralFixed); + //const int type = MExtralgoSpline::kIntegralFixed; + + + const double heighttm = 0.5; // IntegralAbs { 1.5pe * 9.6mV/pe } / IntegralRel { 0.5 } + + Long_t max = 0; // All + Long_t max0 = max; // Time marker + Long_t max1 = max; // Light pulser + //Long_t max2 = 3000; // Calibration ratio + Long_t max3 = max; // Pedestal Rndm + Long_t max4 = max; // Pedestal Ext + Long_t max5 = max; // Data + + // ====================================================== + + if (map && gSystem->AccessPathName(map, kFileExists)) + { + gLog << "ERROR - Cannot access mapping file '" << map << "'" << endl; + return 1; + } + + // The sequence file which defines the files for the analysis + MSequence seq(seqfile); + if (!seq.IsValid()) + { + gLog << "ERROR - Sequence '" << seqfile << "' invalid!" << endl; + return 2; + } + + // -------------------------------------------------------------------------------- + + gLog.Separator("Callisto"); + gLog << "Calibrate data of sequence '" << seq.GetFileName() << "'" << endl; + gLog << endl; + + // ------------------------------------------------------ + + ostringstream drsname; + drsname << gSystem->DirName(seqfile) << "/"; + drsname << seq.GetNight().GetNightAsInt() << "_"; + drsname << Form("%03d", seq.GetDrsSequence()) << ".drs.seq"; + + MSequence drs(drsname.str().c_str()); + if (!drs.IsValid()) + { + gLog << "ERROR - DRS sequence invalid!" << endl; + return 3; + } + + gLog << "DRS sequence file: " << drsname.str() << '\n' << endl; + + TString drsfile = seq.GetFileName(0, MSequence::kRawDrs); + if (drsfile.IsNull()) + { + cout << "No DRS file available in sequence." << endl; + return 4; + } + + TString timfile = drs.GetFileName(0, MSequence::kFitsDat); + TString drs1024 = drs.GetFileName(0, MSequence::kFitsDrs); + TString pedfile = seq.GetFileName(0, MSequence::kFitsPed); + TString calfile = seq.GetFileName(0, MSequence::kFitsCal); + + gLog << "DRS calib 300: " << drsfile << '\n'; + gLog << "DRS calib 1024: " << drs1024 << "\n\n"; + + MDrsCalibration drscalib300; + if (!drscalib300.ReadFits(drsfile.Data())) + return 5; + + MDrsCalibration drscalib1024; + if (!drscalib1024.ReadFits(drs1024.Data())) + return 6; + + gLog << "Time calibration : " << timfile << '\n'; + gLog << "Pedestal file: " << pedfile << '\n'; + gLog << "Light Pulser file: " << calfile << '\n' << endl; + + // ------------------------------------------------------ + + MDirIter iter; + if (seq.GetRuns(iter, MSequence::kFitsDat)<=0) + { + gLog << "ERROR - Sequence valid but without files." << endl; + return 7; + } + iter.Print(); + + // ====================================================== + + MStatusArray arrt, arrp; + + TFile ft(lp_template); + if (arrt.Read()<=0) + { + cout << "ERROR - Reading LP template from " << lp_template << endl; + return 100; + } + + MHCamera *lpref = (MHCamera*)arrt.FindObjectInCanvas("ExtCalSig;avg", "MHCamera", "Cam"); + if (!lpref) + { + cout << "ERROR - LP Template not found in " << lp_template << endl; + return 101; + } + lpref->SetDirectory(0); + + MHCamera *gain = (MHCamera*)arrt.FindObjectInCanvas("gain", "MHCamera", "Gain"); + if (!gain) + { + cout << "ERROR - Gain not found in " << lp_template << endl; + return 101; + } + gain->SetDirectory(0); + + TFile fp(pulse_template); + if (arrp.Read()<=0) + { + cout << "ERROR - Reading Pulse template from " << pulse_template << endl; + return 102; + } + + TH1F *hpulse = (TH1F*)arrp.FindObjectInCanvas("hPixelEdgeMean0_0", "TH1F", "cgpPixelPulses0"); + if (!hpulse) + { + cout << "ERROR - Pulse Template not found in " << pulse_template << endl; + return 103; + } + hpulse->SetDirectory(0); + + // ====================================================== + + MStatusDisplay *d = new MStatusDisplay; + + MBadPixelsCam badpixels; + badpixels.InitSize(1440); + badpixels[ 424].SetUnsuitable(MBadPixelsPix::kUnsuitable); + badpixels[ 583].SetUnsuitable(MBadPixelsPix::kUnsuitable); + badpixels[ 830].SetUnsuitable(MBadPixelsPix::kUnsuitable); + badpixels[ 923].SetUnsuitable(MBadPixelsPix::kUnsuitable); + badpixels[1208].SetUnsuitable(MBadPixelsPix::kUnsuitable); + badpixels[1399].SetUnsuitable(MBadPixelsPix::kUnsuitable); + + // Twin pixel + // 113 + // 115 + // 354 + // 423 + // 1195 + // 1393 + + MDrsCalibrationTime timecam; + + // Plot the trigger pattern rates vs. run-number + MH3 hrate("MRawRunHeader.GetFileID", "MRawEvtHeader.GetTriggerID&0xff00"); + hrate.SetWeight("1./TMath::Max(MRawRunHeader.GetRunLength,1)"); + hrate.SetName("Rate"); + hrate.SetTitle("Event rate [Hz];File Id;Trigger Type;"); + hrate.InitLabels(MH3::kLabelsXY); + hrate.DefineLabelY( 0, "Data"); // What if TriggerID==0 already??? + hrate.DefineLabelY(0x100, "Cal"); + hrate.DefineLabelY(0x400, "Ped"); + // hrate.DefaultLabelY("ERROR"); + + Bool_t isinteg = + (type&MExtralgoSpline::kIntegral) || + (type&MExtralgoSpline::kFixedWidth) || + (type&MExtralgoSpline::kDynWidth) + ? kTRUE : kFALSE; + + gStyle->SetOptFit(kTRUE); + + // ====================================================== + + gLog << endl; + gLog.Separator("Processing DRS timing calibration run"); + + MTaskList tlist0; + + MParList plist0; + plist0.AddToList(&tlist0); + plist0.AddToList(&drscalib1024); + plist0.AddToList(&badpixels); + plist0.AddToList(&timecam); + + MEvtLoop loop0("DetermineTimeCal"); + loop0.SetDisplay(d); + loop0.SetParList(&plist0); + + // ------------------ Setup the tasks --------------- + + MRawFitsRead read0(timfile); + + MContinue cont0("MRawEvtHeader.GetTriggerID!=33792", "SelectTim"); + + MGeomApply apply0; + + MDrsCalibApply drsapply0; + + MFillH fill0("MHDrsCalibrationT"); + fill0.SetNameTab("DeltaT"); + + tlist0.AddToList(&read0); + tlist0.AddToList(&apply0); + tlist0.AddToList(&drsapply0); + tlist0.AddToList(&cont0); + tlist0.AddToList(&fill0); + + if (!loop0.Eventloop(max0)) + return 8; + + if (!loop0.GetDisplay()) + return 9; + + /* + MHDrsCalibrationT *t = (MHDrsCalibrationT*)plist4.FindObject("MHDrsCalibrationT"); + t->SetDisplay(d); + t->PlotAll(); + */ + + // ====================================================== + + gLog << endl; + gLog.Separator("Processing external light pulser run"); + + MTaskList tlist1; + + MParList plist1; + plist1.AddToList(&tlist1); + plist1.AddToList(&drscalib300); + plist1.AddToList(&badpixels); + plist1.AddToList(&timecam); + + MEvtLoop loop1("DetermineCalConst"); + loop1.SetDisplay(d); + loop1.SetParList(&plist1); + + // ------------------ Setup the tasks --------------- + + MRawFitsRead read1; + read1.LoadMap(map); + read1.AddFile(calfile); + + MContinue cont1("(MRawEvtHeader.GetTriggerID&0xff00)!=0x100", "SelectCal"); + + MGeomApply apply1; + + MDrsCalibApply drsapply1; + + /* + MPedestalCam fPedestalCamOut1a; + MPedestalCam fPedestalCamOut1b; + MPedestalCam fPedestalCamOut1c; + + MPedCalcPedRun pedcalc1a; + MPedCalcPedRun pedcalc1b; + MPedCalcPedRun pedcalc1c; + pedcalc1a.SetPedestalsOut(&fPedestalCamOut1a); + pedcalc1b.SetPedestalsOut(&fPedestalCamOut1b); + pedcalc1c.SetPedestalsOut(&fPedestalCamOut1c); + + MExtractTimeAndChargeSpline extractor1ab; + extractor1a.SetRange(first_slice, last_slice); + extractor1a.SetRiseTimeHiGain(rise_time); + extractor1a.SetFallTimeHiGain(fall_time); + extractor1a.SetChargeType(type); + extractor1a.SetSaturationLimit(600000); + extractor1a.SetNoiseCalculation(kFALSE); + + pedcalc1a.SetRandomCalculation(kTRUE); + pedcalc1b.SetRandomCalculation(kFALSE); + pedcalc1a.SetExtractor(&extractor1a); + pedcalc1b.SetExtractor($extractor1a); + pedcalc1c.SetRangeFromExtractor(&extractor1a); + */ + + // --- + + MExtractTimeAndChargeSpline extractor1b("ExtractPulse"); + extractor1b.SetRange(first_slice, last_slice); + extractor1b.SetRiseTimeHiGain(rise_time_cal); + extractor1b.SetFallTimeHiGain(fall_time_cal); + extractor1b.SetHeightTm(heighttm); + extractor1b.SetChargeType(type); + extractor1b.SetSaturationLimit(600000); + extractor1b.SetNoiseCalculation(kFALSE); + + MExtractTimeAndChargeSpline extractor1c("ExtractAmplitude"); + extractor1c.SetRange(first_slice, last_slice); + extractor1c.SetChargeType(MExtralgoSpline::kAmplitude); + extractor1c.SetSaturationLimit(600000); + extractor1c.SetNoiseCalculation(kFALSE); + extractor1c.SetNameSignalCam("Amplitude"); + extractor1c.SetNameTimeCam("AmplitudePos"); + + // --- + + MHCamEvent evt1a(5, "CalRatio", "Ratio per slice between integrated signal and amplitude;; r [1/n]"); + evt1a.SetNameSub("Amplitude", kTRUE); + MFillH fill1a(&evt1a, "MExtractedSignalCam", "FillRatio"); + fill1a.SetDrawOption("gaus"); + + MParameterD ratio1a; + ratio1a.SetVal(1./(fall_time_cal+rise_time_cal)); + fill1a.SetWeight(&ratio1a); + + // --- + + MHCamEvent evt1f(0, "ExtCalSig", "Extracted calibration signal;;S [mV·sl]"); + MHCamEvent evt1g(4, "ExtCalTm", "Extracted arrival times;;T [sl]"); + MHCamEvent evt1h(6, "CalCalTm", "Calibrated arrival times;;T [sl]"); + + MHSectorVsTime hist1rmsb("ExtSigVsTm"); + MHSectorVsTime hist1tmb("CalTmVsTm"); + hist1rmsb.SetTitle("Extracted calibration vs event number;;S [mV·sl]"); + hist1rmsb.SetType(0); + hist1tmb.SetTitle("Extracted arrival time vs event number;;T [sl]"); + //hist1tmb.SetType(4); + hist1tmb.SetType(6); + + MFillH fill1f(&evt1f, "MExtractedSignalCam", "FillExtSig"); + MFillH fill1g(&evt1g, "MArrivalTimeCam", "FillExtTm"); + MFillH fill1h(&evt1h, "MSignalCam", "FillCalTm"); + MFillH fill1r(&hist1rmsb, "MExtractedSignalCam", "FillExtSigVsTm"); + //MFillH fill1j(&hist1tmb, "MArrivalTimeCam", "FillExtTmVsTm"); + MFillH fill1j(&hist1tmb, "MSignalCam", "FillCalTmVsTm"); + + fill1f.SetDrawOption("gaus"); + fill1h.SetDrawOption("gaus"); + + // --- + + MCalibrateDrsTimes calctm1a("CalibrateCalEvents"); + calctm1a.SetNameUncalibrated("UncalibratedTimes"); + + MBadPixelsTreat treat1; + treat1.SetProcessPedestalRun(kFALSE); + treat1.SetProcessPedestalEvt(kFALSE); + + // --- + + MHCamEvent evt1c(6, "ExtCalTmShift", "Relative extracted arrival time of calibration pulse (w.r.t. event-median);;\\Delta T [ns]"); + MHCamEvent evt1d(6, "CalCalTmShift", "Relative calibrated arrival time of calibration pulse (w.r.t. event-median);;\\Delta T [ns]"); + + evt1c.SetMedianShift(); + evt1d.SetMedianShift(); + + MFillH fill1c(&evt1c, "UncalibratedTimes", "FillExtCalTm"); + MFillH fill1d(&evt1d, "MSignalCam", "FillCalCalTm"); + fill1d.SetDrawOption("gaus"); + + // ------------------ Setup eventloop and run analysis --------------- + + tlist1.AddToList(&read1); + tlist1.AddToList(&apply1); + tlist1.AddToList(&drsapply1); + tlist1.AddToList(&cont1); + tlist1.AddToList(&extractor1b); + if (isinteg) + { + tlist1.AddToList(&extractor1c); + tlist1.AddToList(&fill1a); + } + tlist1.AddToList(&calctm1a); + tlist1.AddToList(&treat1); + tlist1.AddToList(&fill1f); + tlist1.AddToList(&fill1g); + tlist1.AddToList(&fill1h); + tlist1.AddToList(&fill1r); + tlist1.AddToList(&fill1j); + tlist1.AddToList(&fill1c); + tlist1.AddToList(&fill1d); + + if (!loop1.Eventloop(max1)) + return 10; + + if (!loop1.GetDisplay()) + return 11; + + if (use_delays) + timecam.SetDelays(*evt1h.GetHist()); + + // ========================= Result ================================== + + Double_t avgS = evt1f.GetHist()->GetMean(); + Double_t medS = evt1f.GetHist()->GetMedian(); + Double_t rmsS = evt1f.GetHist()->GetRMS(); + Double_t maxS = evt1f.GetHist()->GetMaximum(); + + MArrayF der1(hpulse->GetNbinsX()); + MArrayF der2(hpulse->GetNbinsX()); + + MExtralgoSpline spline(hpulse->GetArray()+1, hpulse->GetNbinsX(), + der1.GetArray(), der2.GetArray()); + spline.SetRiseFallTime(rise_time_dat, fall_time_dat); + spline.SetExtractionType(type); + spline.SetHeightTm(heighttm); + + spline.Extract(hpulse->GetMaximumBin()-1); + + // The pulser signal is most probably around 400mV/9.5mV + // IntegraFixed 2/48 corresponds to roughly 215mV*50slices + Double_t scale = 1./spline.GetSignal(); + + MArrayD calib(1440); + for (int i=0; i<1440; i++) + { + Double_t g = gain->GetBinContent(i+1)>0.5 ? gain->GetBinContent(i+1) : 1; + if (evt1f.GetHist()->GetBinContent(i+1)>0 && !badpixels[i].IsUnsuitable()) + calib[i] = lpref->GetBinContent(i+1) / evt1f.GetHist()->GetBinContent(i+1) / g; + } + + gROOT->SetSelectedPad(0); + d->AddTab("PulseTemp"); + gPad->SetGrid(); + hpulse->SetNameTitle("Pulse", "Single p.e. pulse template"); + hpulse->SetDirectory(0); + hpulse->SetLineColor(kBlack); + hpulse->DrawCopy(); + + TAxis *ax = hpulse->GetXaxis(); + + Double_t w = hpulse->GetBinWidth(1); + Double_t T = w*(spline.GetTime()+0.5) +ax->GetXmin(); + Double_t H = w*(hpulse->GetMaximumBin()+0.5)+ax->GetXmin(); + + TLine line; + line.SetLineColor(kRed); + line.DrawLine(T-rise_time_dat*w, spline.GetHeight(), + T+fall_time_dat*w, spline.GetHeight()); + line.DrawLine(T, spline.GetHeight()/4, T, 3*spline.GetHeight()/4); + line.DrawLine(T-rise_time_dat*w, 0, + T-rise_time_dat*w, spline.GetHeight()); + line.DrawLine(T+fall_time_dat*w, 0, + T+fall_time_dat*w, spline.GetHeight()); + + TGraph gg; + for (int ix=1; ix<=hpulse->GetNbinsX(); ix++) + for (int i=0; i<10; i++) + { + Double_t x = hpulse->GetBinLowEdge(ix)+i*hpulse->GetBinWidth(ix)/10.; + gg.SetPoint(gg.GetN(), x+w/2, spline.EvalAt(ix-1+i/10.)); + } + + gg.SetLineColor(kBlue); + gg.SetMarkerColor(kBlue); + gg.SetMarkerStyle(kFullDotMedium); + gg.DrawClone("L"); + + gROOT->SetSelectedPad(0); + d->AddTab("CalConst"); + MGeomCamFACT fact; + MHCamera hcalco(fact); + hcalco.SetName("CalConst"); + hcalco.SetTitle(Form("Relative calibration constant [%.0f/pe]", 1./scale)); + hcalco.SetCamContent(calib); + hcalco.SetAllUsed(); + //hcalco.Scale(scale); + hcalco.DrawCopy(); + + // ====================================================== + + gLog << endl; + gLog.Separator("Extracting random pedestal"); + + MTaskList tlist3; + + MParList plist3; + plist3.AddToList(&tlist3); + plist3.AddToList(&drscalib300); + plist3.AddToList(&badpixels); + plist3.AddToList(&timecam); + + MEvtLoop loop3("DetermineRndmPed"); + loop3.SetDisplay(d); + loop3.SetParList(&plist3); + + // ------------------ Setup the tasks --------------- + + MRawFitsRead read3; + read3.LoadMap(map); + read3.AddFile(pedfile); + + MFillH fill3a(&hrate); + + MContinue cont3("(MRawEvtHeader.GetTriggerID&0xff00)!=0x400", "SelectPed"); + + MGeomApply apply3; + + MDrsCalibApply drsapply3; + + //--- + + MExtractTimeAndChargeSpline extractor3; + extractor3.SetRange(first_slice, last_slice); + extractor3.SetRiseTimeHiGain(rise_time_dat); + extractor3.SetFallTimeHiGain(fall_time_dat); + extractor3.SetHeightTm(heighttm); + extractor3.SetChargeType(type); + extractor3.SetSaturationLimit(600000); + extractor3.SetNoiseCalculation(kTRUE); + +// MHCamEvent evt2a(0, "PedRdm", "Extracted Pedestal Signal;;S"); + +// MFillH fill2a(&evt2a, "MExtractedSignalCam", "FillPedRndm"); + + // Use this for data, but not for calibration events +// evt2a.SetErrorSpread(kFALSE); + + /* + MCalibrateData conv3; + conv3.SetCalibrationMode(MCalibrateData::kNone); + conv3.SetPedestalFlag(MCalibrateData::kNo); + conv3.SetCalibConvMinLimit(0); + conv3.SetCalibConvMaxLimit(10000); + conv3.SetScaleFactor(scale); + */ + + MCalibrateFact conv3; + conv3.SetScale(scale); + conv3.SetCalibConst(calib); + + MBadPixelsTreat treat3; + treat3.SetProcessPedestalRun(kFALSE); + treat3.SetProcessPedestalEvt(kFALSE); + treat3.SetProcessTimes(kFALSE); + + MHCamEvent evt3b(0, "PedRdm","Interpolated random pedestal;;Signal [~phe]"); + //evt2b.SetErrorSpread(kFALSE); + + MFillH fill3b(&evt3b, "MSignalCam", "FillPedRdm"); + fill3b.SetDrawOption("gaus"); + + // ------------------ Setup eventloop and run analysis --------------- + + tlist3.AddToList(&read3); + tlist3.AddToList(&apply3); + tlist3.AddToList(&drsapply3); + tlist3.AddToList(&cont3); + tlist3.AddToList(&extractor3); +// tlist3.AddToList(&fill3a); + tlist3.AddToList(&conv3); + tlist3.AddToList(&treat3); + tlist3.AddToList(&fill3b); + + if (!loop3.Eventloop(max3)) + return 14; + + if (!loop3.GetDisplay()) + return 15; + + // ====================================================== + + gLog << endl; + gLog.Separator("Extracting pedestal"); + + MTaskList tlist4; + + MParList plist4; + plist4.AddToList(&tlist4); + plist4.AddToList(&drscalib300); + plist4.AddToList(&badpixels); + plist4.AddToList(&timecam); + + MEvtLoop loop4("DetermineExtractedPed"); + loop4.SetDisplay(d); + loop4.SetParList(&plist4); + + // ------------------ Setup the tasks --------------- + + MRawFitsRead read4; + read4.LoadMap(map); + read4.AddFile(pedfile); + + MContinue cont4("(MRawEvtHeader.GetTriggerID&0xff00)!=0x400", "SelectPed"); + + MGeomApply apply4; + + MDrsCalibApply drsapply4; + + MExtractTimeAndChargeSpline extractor4; + extractor4.SetRange(first_slice, last_slice); + extractor4.SetRiseTimeHiGain(rise_time_dat); + extractor4.SetFallTimeHiGain(fall_time_dat); + extractor4.SetHeightTm(heighttm); + extractor4.SetChargeType(type); + extractor4.SetSaturationLimit(600000); + extractor4.SetNoiseCalculation(kFALSE); + + // MHCamEvent evt3a(0, "PedExt", "Extracted Pedestal Signal;;S"); + + // MFillH fill3a(&evt3a, "MExtractedSignalCam", "FillPedExt"); + + // Use this for data, but not for calibration events +// evt3a.SetErrorSpread(kFALSE); +/* + MCalibrateData conv4; + conv4.SetCalibrationMode(MCalibrateData::kNone); + conv4.SetPedestalFlag(MCalibrateData::kNo); + conv4.SetCalibConvMinLimit(0); + conv4.SetCalibConvMaxLimit(10000); + conv4.SetScaleFactor(scale); +*/ + MCalibrateFact conv4; + conv4.SetScale(scale); + conv4.SetCalibConst(calib); + + MBadPixelsTreat treat4; + treat4.SetProcessPedestalRun(kFALSE); + treat4.SetProcessPedestalEvt(kFALSE); + + MHCamEvent evt4b(0, "PedExt","Interpolated extracted pedestal;;Signal [~phe]"); + //evt4b.SetErrorSpread(kFALSE); + + MFillH fill4b(&evt4b, "MSignalCam", "FillPedExt"); + fill4b.SetDrawOption("gaus"); + + // ------------------ Setup eventloop and run analysis --------------- + + tlist4.AddToList(&read4); + tlist4.AddToList(&apply4); + tlist4.AddToList(&drsapply4); + tlist4.AddToList(&cont4); + tlist4.AddToList(&extractor4); +// tlist4.AddToList(&fill4a); + tlist4.AddToList(&conv4); + tlist4.AddToList(&treat4); + tlist4.AddToList(&fill4b); + + if (!loop4.Eventloop(max4)) + return 15; + + if (!loop4.GetDisplay()) + return 16; + + // =================================================================== + + gLog << endl; + gLog.Separator("Extracting and calibration data"); + + MTaskList tlist5; + + MParList plist5; + plist5.AddToList(&tlist5); + plist5.AddToList(&drscalib300); + plist5.AddToList(&badpixels); + plist5.AddToList(&timecam); + + MEvtLoop loop5("CalibratingData"); + loop5.SetDisplay(d); + loop5.SetParList(&plist5); + + // ------------------ Setup the tasks --------------- + + MRawFitsRead read5; + read5.LoadMap(map); + read5.AddFiles(iter); + + MFillH fill5a(&hrate); + + MGeomApply apply5; + + MDrsCalibApply drsapply5; + + MFDataPhrase filterdat("(MRawEvtHeader.GetTriggerID&0xff00)==0", "SelectDat"); + MFDataPhrase filtercal("(MRawEvtHeader.GetTriggerID&0xff00)==0x100", "SelectCal"); + MFDataPhrase filterped("(MRawEvtHeader.GetTriggerID&0xff00)==0x400", "SelectPed"); + MFDataPhrase filterncl("(MRawEvtHeader.GetTriggerID&0xff00)!=0x100", "SelectNonCal"); + + //MContinue cont4("MRawEvtHeader.GetTriggerID!=4", "SelectData"); + + // --- + + MExtractTimeAndChargeSpline extractor5dat; + extractor5dat.SetRange(first_slice, last_slice); + extractor5dat.SetRiseTimeHiGain(rise_time_dat); + extractor5dat.SetFallTimeHiGain(fall_time_dat); + extractor5dat.SetHeightTm(heighttm); + extractor5dat.SetChargeType(type); + extractor5dat.SetSaturationLimit(600000); + extractor5dat.SetNoiseCalculation(kFALSE); + + MExtractTimeAndChargeSpline extractor5cal; + extractor5cal.SetRange(first_slice, last_slice); + extractor5cal.SetRiseTimeHiGain(rise_time_cal); + extractor5cal.SetFallTimeHiGain(fall_time_cal); + extractor5cal.SetHeightTm(heighttm); + extractor5cal.SetChargeType(type); + extractor5cal.SetSaturationLimit(600000); + extractor5cal.SetNoiseCalculation(kFALSE); + + MExtractTimeAndChargeSpline extractor5tm("ExtractTM"); + extractor5tm.SetRange(last_slice, 294); + extractor5tm.SetRiseTimeHiGain(1); + extractor5tm.SetFallTimeHiGain(1); + extractor5tm.SetHeightTm(0.5); + extractor5tm.SetChargeType(MExtralgoSpline::kAmplitudeRel); + extractor5tm.SetSaturationLimit(600000); + extractor5tm.SetNoiseCalculation(kFALSE); + extractor5tm.SetNameSignalCam("TimeMarkerAmplitude"); + extractor5tm.SetNameTimeCam("TimeMarkerTime"); + + extractor5dat.SetFilter(&filterncl); + extractor5cal.SetFilter(&filtercal); + //extractor4tm.SetFilter(&filtercal); + + // --- +/* + MCalibrateData conv5; + conv5.SetCalibrationMode(MCalibrateData::kNone); + conv5.SetPedestalFlag(MCalibrateData::kNo); + conv5.SetCalibConvMinLimit(0); + conv5.SetCalibConvMaxLimit(10000); + conv5.SetScaleFactor(scale); +*/ + MCalibrateFact conv5; + conv5.SetScale(scale); + conv5.SetCalibConst(calib); + + MCalibrateDrsTimes calctm5; + calctm5.SetNameUncalibrated("UncalibratedTimes"); + + MCalibrateDrsTimes calctm5tm("CalibrateTimeMarker"); + calctm5tm.SetNameArrivalTime("TimeMarkerTime"); + calctm5tm.SetNameUncalibrated("UncalTimeMarker"); + calctm5tm.SetNameCalibrated("TimeMarker"); + calctm5tm.SetTimeMarker(); + //calctm4tm.SetFilter(&filtercal); + + MHCamEvent evt5m(6, "ExtTm", "Extracted arrival times of calibration pulse;;\\Delta T [ns]"); + MHCamEvent evt5n(6, "CalTm", "Calibrated arrival times of calibration pulse;;\\Delta T [ns]"); + MHCamEvent evt5q(6, "ExtTmShift", "Relative extracted arrival times of calibration pulse (w.r.t. event-median);;\\Delta T [ns]"); + MHCamEvent evt5r(6, "CalTmShift", "Relative calibrated arrival times of calibration pulse (w.r.t. event-median);;\\Delta T [ns]"); + MHCamEvent evt5s(6, "ExtTM", "Extracted absolute time marker position;;T [sl]"); + MHCamEvent evt5t(6, "CalTM", "Calibrated absolute time marker position;;T [ns]"); + MHCamEvent evt5u(6, "ExtTMshift", "Relative extracted time marker position (w.r.t. event-median);;\\Delta T [ns]"); + MHCamEvent evt5v(6, "CalTMshift", "Relative calibrated time marker position (w.r.t. event-median);;\\Delta T [ns]"); + MHCamEvent evt5w(6, "ExtDiff", "Difference between extracted arrival time of time marker and calibration pulse;;\\Delta T [ns]"); + MHCamEvent evt5x(6, "CalDiff", "Difference between calibrated arrival time of time marker and calibration pulse;;\\Delta T [ns]"); + + evt5w.SetNameSub("UncalibratedTimes"); + evt5x.SetNameSub("MSignalCam"); + + evt5q.SetMedianShift(); + evt5r.SetMedianShift(); + evt5u.SetMedianShift(); + evt5v.SetMedianShift(); + //evt4w.SetMedianShift(); + //evt4x.SetMedianShift(); + + MFillH fill5m(&evt5m, "UncalibratedTimes", "FillExtTm"); + MFillH fill5n(&evt5n, "MSignalCam", "FillCalTm"); + MFillH fill5q(&evt5q, "UncalibratedTimes", "FillExtTmShift"); + MFillH fill5r(&evt5r, "MSignalCam" , "FillCalTmShift"); + MFillH fill5s(&evt5s, "UncalTimeMarker", "FillExtTM"); + MFillH fill5t(&evt5t, "TimeMarker", "FillCalTM"); + MFillH fill5u(&evt5u, "UncalTimeMarker", "FillExtTMshift"); + MFillH fill5v(&evt5v, "TimeMarker", "FillCalTMshift"); + MFillH fill5w(&evt5w, "UncalTimeMarker", "FillExtDiff"); + MFillH fill5x(&evt5x, "TimeMarker", "FillCalDiff"); + + fill5m.SetDrawOption("gaus"); + fill5n.SetDrawOption("gaus"); + fill5q.SetDrawOption("gaus"); + fill5r.SetDrawOption("gaus"); + //fill5s.SetDrawOption("gaus"); + //fill5t.SetDrawOption("gaus"); + //fill5u.SetDrawOption("gaus"); + //fill5v.SetDrawOption("gaus"); + //fill5w.SetDrawOption("gaus"); + //fill5x.SetDrawOption("gaus"); + + + MBadPixelsTreat treat5; + treat5.SetProcessPedestalRun(kFALSE); + treat5.SetProcessPedestalEvt(kFALSE); + + MHSectorVsTime hist5cal("CalVsTm"); + MHSectorVsTime hist5ped("PedVsTm"); + hist5cal.SetTitle("Median calibrated calibration signal vs event number;;Signal [~phe]"); + hist5ped.SetTitle("Median calibrated pedestal signal vs event number;;Signal [~phe]"); + hist5cal.SetType(0); + hist5ped.SetType(0); + hist5cal.SetMinimum(0); + hist5ped.SetMinimum(0); + hist5cal.SetUseMedian(); + hist5ped.SetUseMedian(); + hist5cal.SetNameTime("MTime"); + hist5ped.SetNameTime("MTime"); + + MFillH fill5cal(&hist5cal, "MSignalCam", "FillCalVsTm"); + MFillH fill5ped(&hist5ped, "MSignalCam", "FillPedVsTm"); + fill5cal.SetFilter(&filtercal); + fill5ped.SetFilter(&filterped); + + MHCamEvent evt5b(0, "ExtSig", "Extracted signal;;S [mV·sl]"); + MHCamEvent evt5c(0, "CalSig", "Calibrated and interpolated signal;;S [~phe]"); + MHCamEvent evt5d(4, "ExtSigTm", "Extracted time;;T [sl]"); + MHCamEvent evt5e(6, "CalSigTm", "Calibrated and interpolated time;;T [ns]"); + + MFillH fill5b(&evt5b, "MExtractedSignalCam", "FillExtSig"); + MFillH fill5c(&evt5c, "MSignalCam", "FillCalSig"); + MFillH fill5d(&evt5d, "MArrivalTimeCam", "FillExtTm"); + MFillH fill5e(&evt5e, "MSignalCam", "FillCalTm"); + + fill5c.SetDrawOption("gaus"); + fill5d.SetDrawOption("gaus"); + fill5e.SetDrawOption("gaus"); + + /* + fill4b.SetFilter(&filterdat); + fill4c.SetFilter(&filterdat); + fill4d.SetFilter(&filterdat); + fill4e.SetFilter(&filterdat); + */ + + //MFSoftwareTrigger swtrig; + //MContinue contsw(&swtrig, "FilterSwTrigger", "Software trigger"); + //contsw.SetInverted(); + + const TString fname(Form("s/([0-9]+_[0-9]+)[.]fits([.]gz)?$/%s\\/$1_C.root/", + MJob::Esc(outpath).Data())); + + // The second rule is for the case reading raw-files! + MWriteRootFile write5(2, fname, "RECREATE", "Calibrated Data"); + write5.AddContainer("MRawRunHeader", "RunHeaders"); + write5.AddContainer("MGeomCam", "RunHeaders"); + write5.AddContainer("MSignalCam", "Events"); + write5.AddContainer("MTime", "Events"); + write5.AddContainer("MRawEvtHeader", "Events"); + //write.AddContainer("MTriggerPattern", "Events"); + + // ------------------ Setup histograms and fill tasks ---------------- + + MContinue test; + test.SetFilter(&filterncl); + + MTaskList tlist5tm; + tlist5tm.AddToList(&extractor5tm); + tlist5tm.AddToList(&calctm5tm); + tlist5tm.AddToList(&fill5m); + tlist5tm.AddToList(&fill5n); + tlist5tm.AddToList(&fill5q); + tlist5tm.AddToList(&fill5r); + //tlist5tm.AddToList(&fill5s); + //tlist5tm.AddToList(&fill5t); + tlist5tm.AddToList(&fill5u); + tlist5tm.AddToList(&fill5v); + tlist5tm.AddToList(&fill5w); + tlist5tm.AddToList(&fill5x); + tlist5tm.SetFilter(&filtercal); + + MTaskList tlist5dat; + tlist5dat.AddToList(&fill5b); + tlist5dat.AddToList(&fill5c); + tlist5dat.AddToList(&fill5d); + tlist5dat.AddToList(&fill5e); + tlist5dat.SetFilter(&filterdat); + + tlist5.AddToList(&read5); + tlist5.AddToList(&apply5); + tlist5.AddToList(&drsapply5); + tlist5.AddToList(&filterncl); + //tlist5.AddToList(&test); + tlist5.AddToList(&filterdat); + tlist5.AddToList(&filtercal); + tlist5.AddToList(&filterped); + tlist5.AddToList(&fill5a); + tlist5.AddToList(&extractor5dat); + tlist5.AddToList(&extractor5cal); + tlist5.AddToList(&calctm5); + tlist5.AddToList(&tlist5tm); + tlist5.AddToList(&conv5); + tlist5.AddToList(&treat5); + tlist5.AddToList(&fill5ped); + tlist5.AddToList(&fill5cal); + tlist5.AddToList(&tlist5dat); + tlist5.AddToList(&write5); + + if (!loop5.Eventloop(max4)) + return 18; + + if (!loop5.GetDisplay()) + return 19; + + TString title = "-- Calibrated signal #"; + title += seq.GetSequence(); + title += " ("; + title += drsfile; + title += ") --"; + d->SetTitle(title, kFALSE); + + TString path; + path += Form("%s/20%6d_%03d-calibration.root", outpath, + seq.GetSequence()/1000, seq.GetSequence()%1000); + + d->SaveAs(path); + + return 0; +}