Index: /trunk/DataCheck/QuickLook/RunStar.sh
===================================================================
--- /trunk/DataCheck/QuickLook/RunStar.sh	(revision 15302)
+++ /trunk/DataCheck/QuickLook/RunStar.sh	(revision 15302)
@@ -0,0 +1,47 @@
+#!/bin/bash
+#
+
+source `dirname $0`/../Sourcefile.sh
+printprocesslog "INFO starting $0"
+
+seqfile=$2
+seqnum=`basename $seqfile | sed -e 's/[.]seq//g'`
+inpath=`dirname $seqfile | sed -e "s/sequences/${1}\/callisto/"`
+outpath=`dirname $seqfile | sed -e "s/sequences/${1}\/star/"`
+makedir $outpath
+logfile=$outpath"/"$seqnum"-images.log"
+
+cd $mars
+
+# run star 
+printprocesslog "INFO starting star.C for sequence "$seqnum
+
+check1=`root -q -b fact/star.C\("\"$seqfile\""\,4.0\,2.5\,"\"$inpath\""\,"\"$outpath\""\) | tee $logfile | intgrep`
+
+case $check1 in
+   0)   printprocesslog "INFO star was successful for sequence "$seqnum" (check1=$check1)"
+        # run merpp
+        printprocesslog "INFO starting merpp3.C for sequence "$seqnum
+        logfile=$outpath"/"$seqnum"-merpp.log"
+        
+        check1=`root -q -b fact/merpp3.C\("\"$seqfile\""\,"\"$outpath\""\) | tee $logfile | intgrep`
+        
+        case $check1 in
+           0)   printprocesslog "INFO merpp was successful for sequence "$seqnum" (check1=$check1)"
+                ;;
+           *)   printprocesslog "ERROR merpp3.C failed for sequence "$seqnum" (check1=$check1)"
+                # delete image file in this case to be sure that ganymed doesn't try to process it
+                imgfile=$outpath"/"$seqnum"_I.root"
+                if ls $imgfile >/dev/null 2>&1
+                then
+                   rm -v $imagefile
+                fi
+                ;;
+        esac
+        ;;
+   *)   printprocesslog "ERROR star.C failed for sequence "$seqnum" (check1=$check1)"
+        ;;
+esac
+
+finish 
+