Index: /trunk/DataCheck/QuickLook/Step2a.sh
===================================================================
--- /trunk/DataCheck/QuickLook/Step2a.sh	(revision 15306)
+++ /trunk/DataCheck/QuickLook/Step2a.sh	(revision 15306)
@@ -0,0 +1,131 @@
+#!/bin/bash
+#
+source `dirname $0`/../Sourcefile.sh
+printprocesslog "INFO starting $0"
+
+#root=/opt/root_svn/bin/thisroot.sh
+#source $root
+#factpath=/home/fact/FACT++.in-run-fad-loss
+
+#anapath=/loc_data/analysis
+
+if [ "$1" = "" ]
+then 
+   # get date (before 18h there is no new data to be processed)
+   datepath=`date --date="-18HOUR" +%Y/%m/%d`
+else
+   datepath=$1
+fi
+printprocesslog "INFO processing "$datepath
+#echo "INFO processing "$datepath
+night=`echo $datepath | sed -e 's/\///g'`
+
+sources=( 1 2 5 7 )
+numganymeds=0
+
+for source in ${sources[@]}
+do 
+   # doing first 5min datasets, i.e. one image file per dataset
+   min=5
+   # getting all image files for this source and night
+   printprocesslog "INFO get file list for source "$source
+   files=( `find /loc_data/analysis/$source/star/$datepath -type f -name '*_I.root' 2>/dev/null | sort` )
+   if [ ${#files[@]} -eq 0 ]
+   then
+      printprocesslog "INFO no image files available for source "$source" on "$datepath
+      continue
+   fi
+   # write data set file
+   dspath=$anapath/$source/datasets`printf %03d $min`min/$datepath
+   makedir $dspath
+   for (( i=1 ; i<=${#files[@]} ; i++ ))
+   do 
+      dsfile=$dspath/dataset$i.txt
+      printprocesslog "INFO writing dataset file "$dsfile
+      # write dataset only if merpp-log is available to make sure that star-file is complete
+      merpplog=`echo ${files[$i-1]} | sed -e 's/_I.root/-merpp.log/'`
+      stillrunning=`find $merpplog -mmin -1 2>/dev/null`
+      if [ -e $merpplog ] && [ "$stillrunning" == "" ]
+      then 
+         echo `dirname ${files[$i-1]}`" "`basename ${files[$i-1]}` > $dsfile
+      else
+         echo "merpp still running - wait with file "${files[$i-1]}
+         continue
+      fi
+      # process only if ganymedlogfiles is not yet there
+      logfile=`echo $dsfile | sed -e 's/datasets/ganymed/' -e 's/dataset//' -e 's/[.]txt/-ganymed[.]log/'`
+      if ! ls $logfile >/dev/null 2>&1
+      then
+         echo $logfile" "${files[$i-1]}
+         `dirname $0`/RunGanymed.sh $source $dsfile
+         numganymeds=`echo " $numganymeds + 1 " | bc -l`
+      fi
+   done 
+   
+   # get list of 5min-dataset-files as starting point
+   printprocesslog "INFO get list of dataset files for "$min"min"
+   files=( `find $dspath -type f -name 'dataset*.txt' | sort` )
+   minold=5
+   # loop over data set files
+   # copy always 2 in one new file for double observation time
+   while [ ${#files[@]} -gt 1 ]
+   do
+      # get double observation time and path for datasets
+      min=`echo " $minold + $minold " | bc -l `
+      dspathold=$dspath
+      dspath=$anapath"/"$source"/datasets"`printf %03d $min`"min/"$datepath
+      makedir $dspath
+      # loop over already existing data set files
+      for (( i=0 ; i<=${#files[@]} ; i++ ))
+      do 
+         # number of 1st and 2nd old dataset file
+         num1=`echo " $i + $i + 1" | bc -l `
+         num2=`echo " $i + $i + 2 " | bc -l `
+         # number of new dataset file
+         dsnum=`echo " $i + 1 " | bc -l `
+         # continue only if 2 dataset files are left
+         if ! [ ${files[$num1]} ]
+         then 
+            break
+         fi
+         ds1=$dspathold"/dataset"$num1".txt"
+         ds2=$dspathold"/dataset"$num2".txt"
+         dsfile=$dspath"/dataset"$dsnum".txt"
+         if ! [ -e $ds1 ] || ! [ -e $ds2 ] 
+         then
+            echo $ds1" or "$ds2" is still missing -> continue."
+            continue
+         fi
+         # copy two old into one new dataset file
+         printprocesslog "INFO writing dataset "$dsfile
+         cat $ds1 > $dsfile
+         cat $ds2 >> $dsfile
+         # process only if ganymedlogfiles is not yet there
+         logfile=`echo $dsfile | sed -e 's/datasets/ganymed/' -e 's/dataset//' -e 's/[.]txt/-ganymed[.]log/'`
+         if ! ls $logfile  >/dev/null 2>&1
+         then
+            echo $logfile
+            `dirname $0`/RunGanymed.sh $source $dsfile
+             numganymeds=`echo " $numganymeds + 1 " | bc -l`
+         fi
+      done
+      # get list of new dataset files
+      printprocesslog "INFO get list of dataset files for "$min"min"
+      files=( `find $dspath -type f -name 'dataset*.txt' | sort` )
+      minold=$min
+   done
+   if [ $numganymeds -gt 0 ]
+   then 
+       if ! ps aux | grep AutomaticAnalysisStep2b | grep -v grep >/dev/null 2>&1
+       then 
+         `dirname $0`/AutomaticAnalysisStep2b.sh &
+       fi
+       if ! ps aux | grep AutomaticAnalysisStep3 | grep -v grep >/dev/null 2>&1
+       then 
+         `dirname $0`/AutomaticAnalysisStep3.sh min &
+       fi
+      numganymeds=0
+   fi
+done
+
+finish