Index: branches/Mars_MC/fact/analysis/mc/callisto.C
===================================================================
--- branches/Mars_MC/fact/analysis/mc/callisto.C	(revision 17055)
+++ branches/Mars_MC/fact/analysis/mc/callisto.C	(revision 17055)
@@ -0,0 +1,949 @@
+int callisto(const char *seqfile="seq/2012/01/23/20120123_023.seq", const char *outpath = "output", bool use_delays=true)
+{
+    // ======================================================
+
+    // true:  Display correctly mapped pixels in the camera displays
+    //        but the value-vs-index plot is in software/spiral indices
+    // false: Display pixels in hardware/linear indices,
+    //        but the order is the camera display is distorted
+    bool usemap = true;
+
+    // map file to use (get that from La Palma!)
+    const char *map = usemap ? "/home/fact/FACT++/FACTmap111030.txt" : NULL;
+
+    Bool_t maximum = kTRUE;
+
+    const char *lp_template    = maximum ?
+        "template-lp-extractor-maximum.root" :
+        "template-lp-extractor-leading-edge.root";
+
+    const char *pulse_template = "template-pulse.root";
+
+    // ------------------------------------------------------
+
+    // Calib: 51 / 90 / 197 (20% TH)
+    // Data:  52 / 64 / 104 (20% TH)
+
+    // Extraction range in slices. It will always(!) contain the full range
+    // of integration
+    const int first_slice =  20; //  10ns
+    const int last_slice  = 250; // 125ns
+
+    // Note that rise and fall time mean different things whether you use IntegralFixed or IntegraRel:
+    //
+    //  IntegralFixed:
+    //    * fRiseTime: Number of slices left  from arrival time
+    //    * fFallTime: Number of slices right from arrival time
+    //  IntegralRel:
+    //    * fRiseTime: Number of slices left  from maximum time
+    //    * fFallTime: Number of slices right from maximum time
+    //
+    const int rise_time_cal = maximum ?  40 :  10; // was 13;   5ns
+    const int fall_time_cal = maximum ? 120 : 160; // was 23;  80ns
+
+    const int rise_time_dat = maximum ?  10 :   2; // was 13; was 10;   1ns
+    const int fall_time_dat = maximum ?  40 :  48; // was 23; was 40;  24ns
+
+    // Extraction type: Extract integral and half leading edge
+
+    const int type = maximum ? (MExtralgoSpline::kIntegralRel) : (MExtralgoSpline::kIntegralFixed);
+    //const int type = MExtralgoSpline::kIntegralFixed;
+
+
+    const double heighttm   = 0.5; // IntegralAbs { 1.5pe * 9.6mV/pe } / IntegralRel { 0.5 }
+
+    Long_t max  =    0;  // All
+    Long_t max0 =  max;  // Time marker
+    Long_t max1 =  max;  // Light pulser
+    //Long_t max2 = 3000;  // Calibration ratio
+    Long_t max3 =  max;  // Pedestal Rndm
+    Long_t max4 =  max;  // Pedestal Ext
+    Long_t max5 =  max;  // Data
+
+    // ======================================================
+
+    if (map && gSystem->AccessPathName(map, kFileExists))
+    {
+        gLog << "ERROR - Cannot access mapping file '" << map << "'" << endl;
+        return 1;
+    }
+
+    // The sequence file which defines the files for the analysis
+    MSequence seq(seqfile);
+    if (!seq.IsValid())
+    {
+        gLog << "ERROR - Sequence '" << seqfile << "' invalid!" << endl;
+        return 2;
+    }
+
+    // --------------------------------------------------------------------------------
+
+    gLog.Separator("Callisto");
+    gLog << "Calibrate data of sequence '" << seq.GetFileName() << "'" << endl;
+    gLog << endl;
+
+    // ------------------------------------------------------
+
+    ostringstream drsname;
+    drsname << gSystem->DirName(seqfile) << "/";
+    drsname << seq.GetNight().GetNightAsInt() << "_";
+    drsname << Form("%03d", seq.GetDrsSequence()) << ".drs.seq";
+
+    MSequence drs(drsname.str().c_str());
+    if (!drs.IsValid())
+    {
+        gLog << "ERROR - DRS sequence invalid!" << endl;
+        return 3;
+    }
+
+    gLog << "DRS sequence file: " << drsname.str() << '\n' << endl;
+
+    TString drsfile = seq.GetFileName(0, MSequence::kRawDrs);
+    if (drsfile.IsNull())
+    {
+        cout << "No DRS file available in sequence." << endl;
+        return 4;
+    }
+
+    TString timfile = drs.GetFileName(0, MSequence::kFitsDat);
+    TString drs1024 = drs.GetFileName(0, MSequence::kFitsDrs);
+    TString pedfile = seq.GetFileName(0, MSequence::kFitsPed);
+    TString calfile = seq.GetFileName(0, MSequence::kFitsCal);
+
+    gLog << "DRS calib     300: " << drsfile << '\n';
+    gLog << "DRS calib    1024: " << drs1024 << "\n\n";
+
+    MDrsCalibration drscalib300;
+    if (!drscalib300.ReadFits(drsfile.Data()))
+        return 5;
+
+    MDrsCalibration drscalib1024;
+    if (!drscalib1024.ReadFits(drs1024.Data()))
+        return 6;
+
+    gLog << "Time calibration : " << timfile << '\n';
+    gLog << "Pedestal     file: " << pedfile << '\n';
+    gLog << "Light Pulser file: " << calfile << '\n' << endl;
+
+    // ------------------------------------------------------
+
+    MDirIter iter;
+    if (seq.GetRuns(iter, MSequence::kFitsDat)<=0)
+    {
+        gLog << "ERROR - Sequence valid but without files." << endl;
+        return 7;
+    }
+    iter.Print();
+
+    // ======================================================
+
+    MStatusArray arrt, arrp;
+
+    TFile ft(lp_template);
+    if (arrt.Read()<=0)
+    {
+        cout << "ERROR - Reading LP template from " << lp_template << endl;
+        return 100;
+    }
+
+    MHCamera *lpref = (MHCamera*)arrt.FindObjectInCanvas("ExtCalSig;avg", "MHCamera", "Cam");
+    if (!lpref)
+    {
+        cout << "ERROR - LP Template not found in " << lp_template << endl;
+        return 101;
+    }
+    lpref->SetDirectory(0);
+
+    MHCamera *gain = (MHCamera*)arrt.FindObjectInCanvas("gain", "MHCamera", "Gain");
+    if (!gain)
+    {
+        cout << "ERROR - Gain not found in " << lp_template << endl;
+        return 101;
+    }
+    gain->SetDirectory(0);
+
+    TFile fp(pulse_template);
+    if (arrp.Read()<=0)
+    {
+        cout << "ERROR - Reading Pulse template from " << pulse_template << endl;
+        return 102;
+    }
+
+    TH1F *hpulse = (TH1F*)arrp.FindObjectInCanvas("hPixelEdgeMean0_0", "TH1F", "cgpPixelPulses0");
+    if (!hpulse)
+    {
+        cout << "ERROR - Pulse Template not found in " << pulse_template << endl;
+        return 103;
+    }
+    hpulse->SetDirectory(0);
+
+    // ======================================================
+
+    MStatusDisplay *d = new MStatusDisplay;
+
+    MBadPixelsCam badpixels;
+    badpixels.InitSize(1440);
+    badpixels[ 424].SetUnsuitable(MBadPixelsPix::kUnsuitable);
+    badpixels[ 583].SetUnsuitable(MBadPixelsPix::kUnsuitable);
+    badpixels[ 830].SetUnsuitable(MBadPixelsPix::kUnsuitable);
+    badpixels[ 923].SetUnsuitable(MBadPixelsPix::kUnsuitable);
+    badpixels[1208].SetUnsuitable(MBadPixelsPix::kUnsuitable);
+    badpixels[1399].SetUnsuitable(MBadPixelsPix::kUnsuitable);
+
+    //  Twin pixel
+    //     113
+    //     115
+    //     354
+    //     423
+    //    1195
+    //    1393
+
+    MDrsCalibrationTime timecam;
+
+    // Plot the trigger pattern rates vs. run-number
+    MH3 hrate("MRawRunHeader.GetFileID", "MRawEvtHeader.GetTriggerID&0xff00");
+    hrate.SetWeight("1./TMath::Max(MRawRunHeader.GetRunLength,1)");
+    hrate.SetName("Rate");
+    hrate.SetTitle("Event rate [Hz];File Id;Trigger Type;");
+    hrate.InitLabels(MH3::kLabelsXY);
+    hrate.DefineLabelY(    0, "Data"); // What if TriggerID==0 already???
+    hrate.DefineLabelY(0x100, "Cal");
+    hrate.DefineLabelY(0x400, "Ped");
+    // hrate.DefaultLabelY("ERROR");
+
+    Bool_t isinteg =
+        (type&MExtralgoSpline::kIntegral)    ||
+        (type&MExtralgoSpline::kFixedWidth)  ||
+        (type&MExtralgoSpline::kDynWidth)
+        ? kTRUE : kFALSE;
+
+    gStyle->SetOptFit(kTRUE);
+
+    // ======================================================
+
+    gLog << endl;
+    gLog.Separator("Processing DRS timing calibration run");
+
+    MTaskList tlist0;
+
+    MParList plist0;
+    plist0.AddToList(&tlist0);
+    plist0.AddToList(&drscalib1024);
+    plist0.AddToList(&badpixels);
+    plist0.AddToList(&timecam);
+
+    MEvtLoop loop0("DetermineTimeCal");
+    loop0.SetDisplay(d);
+    loop0.SetParList(&plist0);
+
+    // ------------------ Setup the tasks ---------------
+
+    MRawFitsRead read0(timfile);
+
+    MContinue cont0("MRawEvtHeader.GetTriggerID!=33792", "SelectTim");
+
+    MGeomApply apply0;
+
+    MDrsCalibApply drsapply0;
+
+    MFillH fill0("MHDrsCalibrationTime");
+    fill0.SetNameTab("DeltaT");
+
+    tlist0.AddToList(&read0);
+    tlist0.AddToList(&apply0);
+    tlist0.AddToList(&drsapply0);
+    tlist0.AddToList(&cont0);
+    tlist0.AddToList(&fill0);
+
+    if (!loop0.Eventloop(max0))
+        return 8;
+
+    if (!loop0.GetDisplay())
+        return 9;
+
+    /*
+     MHDrsCalibrationT *t = (MHDrsCalibrationT*)plist4.FindObject("MHDrsCalibrationT");
+     t->SetDisplay(d);
+     t->PlotAll();
+     */
+
+    // ======================================================
+
+    gLog << endl;
+    gLog.Separator("Processing external light pulser run");
+
+    MTaskList tlist1;
+
+    MParList plist1;
+    plist1.AddToList(&tlist1);
+    plist1.AddToList(&drscalib300);
+    plist1.AddToList(&badpixels);
+    plist1.AddToList(&timecam);
+
+    MEvtLoop loop1("DetermineCalConst");
+    loop1.SetDisplay(d);
+    loop1.SetParList(&plist1);
+
+    // ------------------ Setup the tasks ---------------
+
+    MRawFitsRead read1;
+    read1.LoadMap(map);
+    read1.AddFile(calfile);
+
+    MContinue cont1("(MRawEvtHeader.GetTriggerID&0xff00)!=0x100", "SelectCal");
+
+    MGeomApply apply1;
+
+    MDrsCalibApply drsapply1;
+
+    /*
+    MPedestalCam  fPedestalCamOut1a;
+    MPedestalCam  fPedestalCamOut1b;
+    MPedestalCam  fPedestalCamOut1c;
+
+    MPedCalcPedRun pedcalc1a;
+    MPedCalcPedRun pedcalc1b;
+    MPedCalcPedRun pedcalc1c;
+    pedcalc1a.SetPedestalsOut(&fPedestalCamOut1a);
+    pedcalc1b.SetPedestalsOut(&fPedestalCamOut1b);
+    pedcalc1c.SetPedestalsOut(&fPedestalCamOut1c);
+
+    MExtractTimeAndChargeSpline extractor1ab;
+    extractor1a.SetRange(first_slice, last_slice);
+    extractor1a.SetRiseTimeHiGain(rise_time);
+    extractor1a.SetFallTimeHiGain(fall_time);
+    extractor1a.SetChargeType(type);
+    extractor1a.SetSaturationLimit(600000);
+    extractor1a.SetNoiseCalculation(kFALSE);
+
+    pedcalc1a.SetRandomCalculation(kTRUE);
+    pedcalc1b.SetRandomCalculation(kFALSE);
+    pedcalc1a.SetExtractor(&extractor1a);
+    pedcalc1b.SetExtractor($extractor1a);
+    pedcalc1c.SetRangeFromExtractor(&extractor1a);
+    */
+
+    // ---
+
+    MExtractTimeAndChargeSpline extractor1b("ExtractPulse");
+    extractor1b.SetRange(first_slice, last_slice);
+    extractor1b.SetRiseTimeHiGain(rise_time_cal);
+    extractor1b.SetFallTimeHiGain(fall_time_cal);
+    extractor1b.SetHeightTm(heighttm);
+    extractor1b.SetChargeType(type);
+    extractor1b.SetSaturationLimit(600000);
+    extractor1b.SetNoiseCalculation(kFALSE);
+
+    MExtractTimeAndChargeSpline extractor1c("ExtractAmplitude");
+    extractor1c.SetRange(first_slice, last_slice);
+    extractor1c.SetChargeType(MExtralgoSpline::kAmplitude);
+    extractor1c.SetSaturationLimit(600000);
+    extractor1c.SetNoiseCalculation(kFALSE);
+    extractor1c.SetNameSignalCam("Amplitude");
+    extractor1c.SetNameTimeCam("AmplitudePos");
+
+    // ---
+
+    MHCamEvent evt1a(5, "CalRatio", "Ratio per slice between integrated signal and amplitude;; r [1/n]");
+    evt1a.SetNameSub("Amplitude", kTRUE);
+    MFillH fill1a(&evt1a, "MExtractedSignalCam", "FillRatio");
+    fill1a.SetDrawOption("gaus");
+
+    MParameterD ratio1a;
+    ratio1a.SetVal(1./(fall_time_cal+rise_time_cal));
+    fill1a.SetWeight(&ratio1a);
+
+    // ---
+
+    MHCamEvent evt1f(0, "ExtCalSig", "Extracted calibration signal;;S [mV·sl]");
+    MHCamEvent evt1g(4, "ExtCalTm",  "Extracted arrival times;;T [sl]");
+    MHCamEvent evt1h(6, "CalCalTm",  "Calibrated arrival times;;T [sl]");
+
+    MHSectorVsTime hist1rmsb("ExtSigVsTm");
+    MHSectorVsTime hist1tmb("CalTmVsTm");
+    hist1rmsb.SetTitle("Extracted calibration vs event number;;S [mV·sl]");
+    hist1rmsb.SetType(0);
+    hist1tmb.SetTitle("Extracted arrival time vs event number;;T [sl]");
+    //hist1tmb.SetType(4);
+    hist1tmb.SetType(6);
+
+    MFillH fill1f(&evt1f, "MExtractedSignalCam", "FillExtSig");
+    MFillH fill1g(&evt1g, "MArrivalTimeCam",     "FillExtTm");
+    MFillH fill1h(&evt1h, "MSignalCam",          "FillCalTm");
+    MFillH fill1r(&hist1rmsb, "MExtractedSignalCam", "FillExtSigVsTm");
+    //MFillH fill1j(&hist1tmb,  "MArrivalTimeCam",     "FillExtTmVsTm");
+    MFillH fill1j(&hist1tmb,  "MSignalCam",     "FillCalTmVsTm");
+
+    fill1f.SetDrawOption("gaus");
+    fill1h.SetDrawOption("gaus");
+
+    // ---
+
+    MCalibrateDrsTimes calctm1a("CalibrateCalEvents");
+    calctm1a.SetNameUncalibrated("UncalibratedTimes");
+
+    MBadPixelsTreat treat1;
+    treat1.SetProcessPedestalRun(kFALSE);
+    treat1.SetProcessPedestalEvt(kFALSE);
+
+    // ---
+
+    MHCamEvent evt1c(6, "ExtCalTmShift", "Relative extracted arrival time of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
+    MHCamEvent evt1d(6, "CalCalTmShift", "Relative calibrated arrival time of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
+
+    evt1c.SetMedianShift();
+    evt1d.SetMedianShift();
+
+    MFillH fill1c(&evt1c, "UncalibratedTimes", "FillExtCalTm");
+    MFillH fill1d(&evt1d, "MSignalCam",        "FillCalCalTm");
+    fill1d.SetDrawOption("gaus");
+
+    // ------------------ Setup eventloop and run analysis ---------------
+
+    tlist1.AddToList(&read1);
+    tlist1.AddToList(&apply1);
+    tlist1.AddToList(&drsapply1);
+    tlist1.AddToList(&cont1);
+    tlist1.AddToList(&extractor1b);
+    if (isinteg)
+    {
+        tlist1.AddToList(&extractor1c);
+        tlist1.AddToList(&fill1a);
+    }
+    tlist1.AddToList(&calctm1a);
+    tlist1.AddToList(&treat1);
+    tlist1.AddToList(&fill1f);
+    tlist1.AddToList(&fill1g);
+    tlist1.AddToList(&fill1h);
+    tlist1.AddToList(&fill1r);
+    tlist1.AddToList(&fill1j);
+    tlist1.AddToList(&fill1c);
+    tlist1.AddToList(&fill1d);
+
+    if (!loop1.Eventloop(max1))
+        return 10;
+
+    if (!loop1.GetDisplay())
+        return 11;
+
+    if (use_delays)
+        timecam.SetDelays(*evt1h.GetHist());
+
+    // ========================= Result ==================================
+
+    Double_t avgS = evt1f.GetHist()->GetMean();
+    Double_t medS = evt1f.GetHist()->GetMedian();
+    Double_t rmsS = evt1f.GetHist()->GetRMS();
+    Double_t maxS = evt1f.GetHist()->GetMaximum();
+
+    MArrayF der1(hpulse->GetNbinsX());
+    MArrayF der2(hpulse->GetNbinsX());
+
+    MExtralgoSpline spline(hpulse->GetArray()+1, hpulse->GetNbinsX(),
+                           der1.GetArray(), der2.GetArray());
+    spline.SetRiseFallTime(rise_time_dat, fall_time_dat);
+    spline.SetExtractionType(type);
+    spline.SetHeightTm(heighttm);
+
+    spline.Extract(hpulse->GetMaximumBin()-1);
+
+    // The pulser signal is most probably around 400mV/9.5mV
+    // IntegraFixed 2/48 corresponds to roughly 215mV*50slices
+    Double_t scale = 1./spline.GetSignal();
+
+    MArrayD calib(1440);
+    for (int i=0; i<1440; i++)
+    {
+        Double_t g = gain->GetBinContent(i+1)>0.5 ? gain->GetBinContent(i+1) : 1;
+        if (evt1f.GetHist()->GetBinContent(i+1)>0 && !badpixels[i].IsUnsuitable())
+            calib[i] = lpref->GetBinContent(i+1) / evt1f.GetHist()->GetBinContent(i+1) / g;
+    }
+
+    gROOT->SetSelectedPad(0);
+    d->AddTab("PulseTemp");
+    gPad->SetGrid();
+    hpulse->SetNameTitle("Pulse", "Single p.e. pulse template");
+    hpulse->SetDirectory(0);
+    hpulse->SetLineColor(kBlack);
+    hpulse->DrawCopy();
+
+    TAxis *ax = hpulse->GetXaxis();
+
+    Double_t w = hpulse->GetBinWidth(1);
+    Double_t T = w*(spline.GetTime()+0.5)       +ax->GetXmin();
+    Double_t H = w*(hpulse->GetMaximumBin()+0.5)+ax->GetXmin();
+
+    TLine line;
+    line.SetLineColor(kRed);
+    line.DrawLine(T-rise_time_dat*w, spline.GetHeight(),
+                  T+fall_time_dat*w, spline.GetHeight());
+    line.DrawLine(T, spline.GetHeight()/4, T, 3*spline.GetHeight()/4);
+    line.DrawLine(T-rise_time_dat*w, 0,
+                  T-rise_time_dat*w, spline.GetHeight());
+    line.DrawLine(T+fall_time_dat*w, 0,
+                  T+fall_time_dat*w, spline.GetHeight());
+
+    TGraph gg;
+    for (int ix=1; ix<=hpulse->GetNbinsX(); ix++)
+        for (int i=0; i<10; i++)
+        {
+            Double_t x = hpulse->GetBinLowEdge(ix)+i*hpulse->GetBinWidth(ix)/10.;
+            gg.SetPoint(gg.GetN(), x+w/2, spline.EvalAt(ix-1+i/10.));
+        }
+
+    gg.SetLineColor(kBlue);
+    gg.SetMarkerColor(kBlue);
+    gg.SetMarkerStyle(kFullDotMedium);
+    gg.DrawClone("L");
+
+    gROOT->SetSelectedPad(0);
+    d->AddTab("CalConst");
+    MGeomCamFACT fact;
+    MHCamera hcalco(fact);
+    hcalco.SetName("CalConst");
+    hcalco.SetTitle(Form("Relative calibration constant [%.0f/pe]", 1./scale));
+    hcalco.SetCamContent(calib);
+    hcalco.SetAllUsed();
+    //hcalco.Scale(scale);
+    hcalco.DrawCopy();
+
+    // ======================================================
+
+    gLog << endl;
+    gLog.Separator("Extracting random pedestal");
+
+    MTaskList tlist3;
+
+    MParList plist3;
+    plist3.AddToList(&tlist3);
+    plist3.AddToList(&drscalib300);
+    plist3.AddToList(&badpixels);
+    plist3.AddToList(&timecam);
+
+    MEvtLoop loop3("DetermineRndmPed");
+    loop3.SetDisplay(d);
+    loop3.SetParList(&plist3);
+
+    // ------------------ Setup the tasks ---------------
+
+    MRawFitsRead read3;
+    read3.LoadMap(map);
+    read3.AddFile(pedfile);
+
+    MFillH fill3a(&hrate);
+
+    MContinue cont3("(MRawEvtHeader.GetTriggerID&0xff00)!=0x400", "SelectPed");
+
+    MGeomApply apply3;
+
+    MDrsCalibApply drsapply3;
+
+    //---
+
+    MExtractTimeAndChargeSpline extractor3;
+    extractor3.SetRange(first_slice, last_slice);
+    extractor3.SetRiseTimeHiGain(rise_time_dat);
+    extractor3.SetFallTimeHiGain(fall_time_dat);
+    extractor3.SetHeightTm(heighttm);
+    extractor3.SetChargeType(type);
+    extractor3.SetSaturationLimit(600000);
+    extractor3.SetNoiseCalculation(kTRUE);
+
+//    MHCamEvent evt2a(0, "PedRdm", "Extracted Pedestal Signal;;S");
+
+//    MFillH fill2a(&evt2a, "MExtractedSignalCam", "FillPedRndm");
+
+    // Use this for data, but not for calibration events
+//    evt2a.SetErrorSpread(kFALSE);
+
+    /*
+     MCalibrateData conv3;
+     conv3.SetCalibrationMode(MCalibrateData::kNone);
+     conv3.SetPedestalFlag(MCalibrateData::kNo);
+     conv3.SetCalibConvMinLimit(0);
+     conv3.SetCalibConvMaxLimit(10000);
+     conv3.SetScaleFactor(scale);
+     */
+
+    MCalibrateFact conv3;
+    conv3.SetScale(scale);
+    conv3.SetCalibConst(calib);
+
+    MBadPixelsTreat treat3;
+    treat3.SetProcessPedestalRun(kFALSE);
+    treat3.SetProcessPedestalEvt(kFALSE);
+    treat3.SetProcessTimes(kFALSE);
+
+    MHCamEvent evt3b(0, "PedRdm","Interpolated random pedestal;;Signal [~phe]");
+    //evt2b.SetErrorSpread(kFALSE);
+
+    MFillH fill3b(&evt3b, "MSignalCam", "FillPedRdm");
+    fill3b.SetDrawOption("gaus");
+
+    // ------------------ Setup eventloop and run analysis ---------------
+
+    tlist3.AddToList(&read3);
+    tlist3.AddToList(&apply3);
+    tlist3.AddToList(&drsapply3);
+    tlist3.AddToList(&cont3);
+    tlist3.AddToList(&extractor3);
+//    tlist3.AddToList(&fill3a);
+    tlist3.AddToList(&conv3);
+    tlist3.AddToList(&treat3);
+    tlist3.AddToList(&fill3b);
+
+    if (!loop3.Eventloop(max3))
+        return 14;
+
+    if (!loop3.GetDisplay())
+        return 15;
+
+    // ======================================================
+
+    gLog << endl;
+    gLog.Separator("Extracting pedestal");
+
+    MTaskList tlist4;
+
+    MParList plist4;
+    plist4.AddToList(&tlist4);
+    plist4.AddToList(&drscalib300);
+    plist4.AddToList(&badpixels);
+    plist4.AddToList(&timecam);
+
+    MEvtLoop loop4("DetermineExtractedPed");
+    loop4.SetDisplay(d);
+    loop4.SetParList(&plist4);
+
+    // ------------------ Setup the tasks ---------------
+
+    MRawFitsRead read4;
+    read4.LoadMap(map);
+    read4.AddFile(pedfile);
+
+    MContinue cont4("(MRawEvtHeader.GetTriggerID&0xff00)!=0x400", "SelectPed");
+
+    MGeomApply apply4;
+
+    MDrsCalibApply drsapply4;
+
+    MExtractTimeAndChargeSpline extractor4;
+    extractor4.SetRange(first_slice, last_slice);
+    extractor4.SetRiseTimeHiGain(rise_time_dat);
+    extractor4.SetFallTimeHiGain(fall_time_dat);
+    extractor4.SetHeightTm(heighttm);
+    extractor4.SetChargeType(type);
+    extractor4.SetSaturationLimit(600000);
+    extractor4.SetNoiseCalculation(kFALSE);
+
+    //    MHCamEvent evt3a(0, "PedExt", "Extracted Pedestal Signal;;S");
+
+    //    MFillH fill3a(&evt3a, "MExtractedSignalCam", "FillPedExt");
+
+    // Use this for data, but not for calibration events
+//    evt3a.SetErrorSpread(kFALSE);
+/*
+    MCalibrateData conv4;
+    conv4.SetCalibrationMode(MCalibrateData::kNone);
+    conv4.SetPedestalFlag(MCalibrateData::kNo);
+    conv4.SetCalibConvMinLimit(0);
+    conv4.SetCalibConvMaxLimit(10000);
+    conv4.SetScaleFactor(scale);
+*/
+    MCalibrateFact conv4;
+    conv4.SetScale(scale);
+    conv4.SetCalibConst(calib);
+
+    MBadPixelsTreat treat4;
+    treat4.SetProcessPedestalRun(kFALSE);
+    treat4.SetProcessPedestalEvt(kFALSE);
+
+    MHCamEvent evt4b(0, "PedExt","Interpolated extracted pedestal;;Signal [~phe]");
+    //evt4b.SetErrorSpread(kFALSE);
+
+    MFillH fill4b(&evt4b, "MSignalCam", "FillPedExt");
+    fill4b.SetDrawOption("gaus");
+
+    // ------------------ Setup eventloop and run analysis ---------------
+
+    tlist4.AddToList(&read4);
+    tlist4.AddToList(&apply4);
+    tlist4.AddToList(&drsapply4);
+    tlist4.AddToList(&cont4);
+    tlist4.AddToList(&extractor4);
+//    tlist4.AddToList(&fill4a);
+    tlist4.AddToList(&conv4);
+    tlist4.AddToList(&treat4);
+    tlist4.AddToList(&fill4b);
+
+    if (!loop4.Eventloop(max4))
+        return 15;
+
+    if (!loop4.GetDisplay())
+        return 16;
+
+    // ===================================================================
+
+    gLog << endl;
+    gLog.Separator("Extracting and calibration data");
+
+    MTaskList tlist5;
+
+    MParList plist5;
+    plist5.AddToList(&tlist5);
+    plist5.AddToList(&drscalib300);
+    plist5.AddToList(&badpixels);
+    plist5.AddToList(&timecam);
+
+    MEvtLoop loop5("CalibratingData");
+    loop5.SetDisplay(d);
+    loop5.SetParList(&plist5);
+
+    // ------------------ Setup the tasks ---------------
+
+    MRawFitsRead read5;
+    read5.LoadMap(map);
+    read5.AddFiles(iter);
+
+    MFillH fill5a(&hrate);
+
+    MGeomApply apply5;
+
+    MDrsCalibApply drsapply5;
+
+    MFDataPhrase filterdat("(MRawEvtHeader.GetTriggerID&0xff00)==0",     "SelectDat");
+    MFDataPhrase filtercal("(MRawEvtHeader.GetTriggerID&0xff00)==0x100", "SelectCal");
+    MFDataPhrase filterped("(MRawEvtHeader.GetTriggerID&0xff00)==0x400", "SelectPed");
+    MFDataPhrase filterncl("(MRawEvtHeader.GetTriggerID&0xff00)!=0x100", "SelectNonCal");
+
+    //MContinue cont4("MRawEvtHeader.GetTriggerID!=4", "SelectData");
+
+    // ---
+
+    MExtractTimeAndChargeSpline extractor5dat;
+    extractor5dat.SetRange(first_slice, last_slice);
+    extractor5dat.SetRiseTimeHiGain(rise_time_dat);
+    extractor5dat.SetFallTimeHiGain(fall_time_dat);
+    extractor5dat.SetHeightTm(heighttm);
+    extractor5dat.SetChargeType(type);
+    extractor5dat.SetSaturationLimit(600000);
+    extractor5dat.SetNoiseCalculation(kFALSE);
+
+    MExtractTimeAndChargeSpline extractor5cal;
+    extractor5cal.SetRange(first_slice, last_slice);
+    extractor5cal.SetRiseTimeHiGain(rise_time_cal);
+    extractor5cal.SetFallTimeHiGain(fall_time_cal);
+    extractor5cal.SetHeightTm(heighttm);
+    extractor5cal.SetChargeType(type);
+    extractor5cal.SetSaturationLimit(600000);
+    extractor5cal.SetNoiseCalculation(kFALSE);
+
+    MExtractTimeAndChargeSpline extractor5tm("ExtractTM");
+    extractor5tm.SetRange(last_slice, 294);
+    extractor5tm.SetRiseTimeHiGain(1);
+    extractor5tm.SetFallTimeHiGain(1);
+    extractor5tm.SetHeightTm(0.5);
+    extractor5tm.SetChargeType(MExtralgoSpline::kAmplitudeRel);
+    extractor5tm.SetSaturationLimit(600000);
+    extractor5tm.SetNoiseCalculation(kFALSE);
+    extractor5tm.SetNameSignalCam("TimeMarkerAmplitude");
+    extractor5tm.SetNameTimeCam("TimeMarkerTime");
+
+    extractor5dat.SetFilter(&filterncl);
+    extractor5cal.SetFilter(&filtercal);
+    //extractor4tm.SetFilter(&filtercal);
+
+    // ---
+/*
+    MCalibrateData conv5;
+    conv5.SetCalibrationMode(MCalibrateData::kNone);
+    conv5.SetPedestalFlag(MCalibrateData::kNo);
+    conv5.SetCalibConvMinLimit(0);
+    conv5.SetCalibConvMaxLimit(10000);
+    conv5.SetScaleFactor(scale);
+*/
+    MCalibrateFact conv5;
+    conv5.SetScale(scale);
+    conv5.SetCalibConst(calib);
+
+    MCalibrateDrsTimes calctm5;
+    calctm5.SetNameUncalibrated("UncalibratedTimes");
+
+    MCalibrateDrsTimes calctm5tm("CalibrateTimeMarker");
+    calctm5tm.SetNameArrivalTime("TimeMarkerTime");
+    calctm5tm.SetNameUncalibrated("UncalTimeMarker");
+    calctm5tm.SetNameCalibrated("TimeMarker");
+    calctm5tm.SetTimeMarker();
+    //calctm4tm.SetFilter(&filtercal);
+
+    MHCamEvent evt5m(6, "ExtTm",      "Extracted arrival times of calibration pulse;;\\Delta T [ns]");
+    MHCamEvent evt5n(6, "CalTm",      "Calibrated arrival times of calibration pulse;;\\Delta T [ns]");
+    MHCamEvent evt5q(6, "ExtTmShift", "Relative extracted arrival times of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
+    MHCamEvent evt5r(6, "CalTmShift", "Relative calibrated arrival times of calibration pulse (w.r.t. event-median);;\\Delta T [ns]");
+    MHCamEvent evt5s(6, "ExtTM",      "Extracted absolute time marker position;;T [sl]");
+    MHCamEvent evt5t(6, "CalTM",      "Calibrated absolute time marker position;;T [ns]");
+    MHCamEvent evt5u(6, "ExtTMshift", "Relative extracted time marker position (w.r.t. event-median);;\\Delta T [ns]");
+    MHCamEvent evt5v(6, "CalTMshift", "Relative calibrated time marker position (w.r.t. event-median);;\\Delta T [ns]");
+    MHCamEvent evt5w(6, "ExtDiff",    "Difference between extracted arrival time of time marker and calibration pulse;;\\Delta T [ns]");
+    MHCamEvent evt5x(6, "CalDiff",    "Difference between calibrated arrival time of time marker and calibration pulse;;\\Delta T [ns]");
+
+    evt5w.SetNameSub("UncalibratedTimes");
+    evt5x.SetNameSub("MSignalCam");
+
+    evt5q.SetMedianShift();
+    evt5r.SetMedianShift();
+    evt5u.SetMedianShift();
+    evt5v.SetMedianShift();
+    //evt4w.SetMedianShift();
+    //evt4x.SetMedianShift();
+
+    MFillH fill5m(&evt5m, "UncalibratedTimes", "FillExtTm");
+    MFillH fill5n(&evt5n, "MSignalCam",        "FillCalTm");
+    MFillH fill5q(&evt5q, "UncalibratedTimes", "FillExtTmShift");
+    MFillH fill5r(&evt5r, "MSignalCam"       , "FillCalTmShift");
+    MFillH fill5s(&evt5s, "UncalTimeMarker",   "FillExtTM");
+    MFillH fill5t(&evt5t, "TimeMarker",        "FillCalTM");
+    MFillH fill5u(&evt5u, "UncalTimeMarker",   "FillExtTMshift");
+    MFillH fill5v(&evt5v, "TimeMarker",        "FillCalTMshift");
+    MFillH fill5w(&evt5w, "UncalTimeMarker",   "FillExtDiff");
+    MFillH fill5x(&evt5x, "TimeMarker",        "FillCalDiff");
+
+    fill5m.SetDrawOption("gaus");
+    fill5n.SetDrawOption("gaus");
+    fill5q.SetDrawOption("gaus");
+    fill5r.SetDrawOption("gaus");
+    //fill5s.SetDrawOption("gaus");
+    //fill5t.SetDrawOption("gaus");
+    //fill5u.SetDrawOption("gaus");
+    //fill5v.SetDrawOption("gaus");
+    //fill5w.SetDrawOption("gaus");
+    //fill5x.SetDrawOption("gaus");
+
+
+    MBadPixelsTreat treat5;
+    treat5.SetProcessPedestalRun(kFALSE);
+    treat5.SetProcessPedestalEvt(kFALSE);
+
+    MHSectorVsTime hist5cal("CalVsTm");
+    MHSectorVsTime hist5ped("PedVsTm");
+    hist5cal.SetTitle("Median calibrated calibration signal vs event number;;Signal [~phe]");
+    hist5ped.SetTitle("Median calibrated pedestal signal vs event number;;Signal [~phe]");
+    hist5cal.SetType(0);
+    hist5ped.SetType(0);
+    hist5cal.SetMinimum(0);
+    hist5ped.SetMinimum(0);
+    hist5cal.SetUseMedian();
+    hist5ped.SetUseMedian();
+    hist5cal.SetNameTime("MTime");
+    hist5ped.SetNameTime("MTime");
+
+    MFillH fill5cal(&hist5cal, "MSignalCam", "FillCalVsTm");
+    MFillH fill5ped(&hist5ped, "MSignalCam", "FillPedVsTm");
+    fill5cal.SetFilter(&filtercal);
+    fill5ped.SetFilter(&filterped);
+
+    MHCamEvent evt5b(0, "ExtSig",   "Extracted signal;;S [mV·sl]");
+    MHCamEvent evt5c(0, "CalSig",   "Calibrated and interpolated signal;;S [~phe]");
+    MHCamEvent evt5d(4, "ExtSigTm", "Extracted time;;T [sl]");
+    MHCamEvent evt5e(6, "CalSigTm", "Calibrated and interpolated time;;T [ns]");
+
+    MFillH fill5b(&evt5b, "MExtractedSignalCam", "FillExtSig");
+    MFillH fill5c(&evt5c, "MSignalCam",          "FillCalSig");
+    MFillH fill5d(&evt5d, "MArrivalTimeCam",     "FillExtTm");
+    MFillH fill5e(&evt5e, "MSignalCam",          "FillCalTm");
+
+    fill5c.SetDrawOption("gaus");
+    fill5d.SetDrawOption("gaus");
+    fill5e.SetDrawOption("gaus");
+
+    /*
+    fill4b.SetFilter(&filterdat);
+    fill4c.SetFilter(&filterdat);
+    fill4d.SetFilter(&filterdat);
+    fill4e.SetFilter(&filterdat);
+    */
+
+    //MFSoftwareTrigger swtrig;
+    //MContinue contsw(&swtrig, "FilterSwTrigger", "Software trigger");
+    //contsw.SetInverted();
+
+    const TString fname(Form("s/([0-9]+_[0-9]+)[.]fits([.]gz)?$/%s\\/$1_C.root/",
+                             MJob::Esc(outpath).Data()));
+
+    // The second rule is for the case reading raw-files!
+    MWriteRootFile write5(2, fname, "RECREATE", "Calibrated Data");
+    write5.AddContainer("MRawRunHeader", "RunHeaders");
+    write5.AddContainer("MGeomCam",      "RunHeaders");
+    write5.AddContainer("MSignalCam",    "Events");
+    write5.AddContainer("MTime",         "Events");
+    write5.AddContainer("MRawEvtHeader", "Events");
+    //write.AddContainer("MTriggerPattern", "Events");
+
+    // ------------------ Setup histograms and fill tasks ----------------
+
+    MContinue test;
+    test.SetFilter(&filterncl);
+
+    MTaskList tlist5tm;
+    tlist5tm.AddToList(&extractor5tm);
+    tlist5tm.AddToList(&calctm5tm);
+    tlist5tm.AddToList(&fill5m);
+    tlist5tm.AddToList(&fill5n);
+    tlist5tm.AddToList(&fill5q);
+    tlist5tm.AddToList(&fill5r);
+    //tlist5tm.AddToList(&fill5s);
+    //tlist5tm.AddToList(&fill5t);
+    tlist5tm.AddToList(&fill5u);
+    tlist5tm.AddToList(&fill5v);
+    tlist5tm.AddToList(&fill5w);
+    tlist5tm.AddToList(&fill5x);
+    tlist5tm.SetFilter(&filtercal);
+
+    MTaskList tlist5dat;
+    tlist5dat.AddToList(&fill5b);
+    tlist5dat.AddToList(&fill5c);
+    tlist5dat.AddToList(&fill5d);
+    tlist5dat.AddToList(&fill5e);
+    tlist5dat.SetFilter(&filterdat);
+
+    tlist5.AddToList(&read5);
+    tlist5.AddToList(&apply5);
+    tlist5.AddToList(&drsapply5);
+    tlist5.AddToList(&filterncl);
+    //tlist5.AddToList(&test);
+    tlist5.AddToList(&filterdat);
+    tlist5.AddToList(&filtercal);
+    tlist5.AddToList(&filterped);
+    tlist5.AddToList(&fill5a);
+    tlist5.AddToList(&extractor5dat);
+    tlist5.AddToList(&extractor5cal);
+    tlist5.AddToList(&calctm5);
+    tlist5.AddToList(&tlist5tm);
+    tlist5.AddToList(&conv5);
+    tlist5.AddToList(&treat5);
+    tlist5.AddToList(&fill5ped);
+    tlist5.AddToList(&fill5cal);
+    tlist5.AddToList(&tlist5dat);
+    tlist5.AddToList(&write5);
+
+    if (!loop5.Eventloop(max4))
+        return 18;
+
+    if (!loop5.GetDisplay())
+        return 19;
+
+    TString title = "--  Calibrated signal #";
+    title += seq.GetSequence();
+    title += " (";
+    title += drsfile;
+    title += ")  --";
+    d->SetTitle(title, kFALSE);
+
+    TString path;
+    path += Form("%s/20%6d_%03d-calibration.root", outpath,
+                 seq.GetSequence()/1000, seq.GetSequence()%1000);
+
+    d->SaveAs(path);
+
+    return 0;
+}
Index: branches/Mars_MC/fact/analysis/mc/star.C
===================================================================
--- branches/Mars_MC/fact/analysis/mc/star.C	(revision 17055)
+++ branches/Mars_MC/fact/analysis/mc/star.C	(revision 17055)
@@ -0,0 +1,295 @@
+int star(const char *seqfile="sequences/20111205_013.seq", Double_t lvl1=7.8, Double_t lvl2=3.9, const char *inpath = "output", const char *outpath = "output")
+{
+    double deltat = 17.5;
+    //    lvl1 = 2.5;
+    //    lvl2 = 0.5;
+
+    // The sequence file which defines the files for the analysis
+    MSequence seq(seqfile);
+    if (!seq.IsValid())
+    {
+        gLog << "ERROR - Sequence invalid!" << endl;
+        return 1;
+    }
+
+    // ------------------------------------------------------
+
+    gLog.Separator("Star");
+    gLog << "Calculate image parameters of sequence ";
+    gLog << seq.GetFileName() << endl;
+    gLog << endl;
+
+    // ------------------------------------------------------
+
+    gLog << "Inpath:   " << inpath << endl;
+    gLog << "Outpath:  " << outpath << endl;
+
+    const TString rule(Form("s/([0-9]+_[0-9]+)_C[.]root?$/%s\\/$1_I.root/",
+                            MJob::Esc(outpath).Data()));
+    gLog << "Rule:     " << rule << endl;
+
+    MDirIter iter;
+    if (seq.GetRuns(iter, MSequence::kFactCal, inpath)<=0)
+    {
+        gLog << "ERROR - Sequence valid but without files." << endl;
+        return 2;
+    }
+
+    iter.Print();
+
+    gLog.Separator();
+
+    // --------------------------------------------------------
+
+    MBinning bins1(  36,    -90,    90, "BinningAlpha");
+    MBinning bins3(  67, -0.005, 0.665, "BinningTheta", "asin");
+    MBinning bins4(  25,      0,   2.5, "BinningDist");
+
+    MBinning binsM1(100,      0,     5, "BinningMuonRadius");
+    MBinning binsM2( 60,      0,   0.3, "BinningMuonDeviation");
+    MBinning binsM3(150,      0,    60, "BinningMuonTime");
+    MBinning binsM4(300,      0,    30, "BinningMuonTimeRms");
+    MBinning binsM5( 20,      0,   360, "BinningMuonArcPhi");
+    MBinning binsM6( 50,      0,   0.5, "BinningMuonArcWidth");
+    MBinning binsM7( 30,      5,  5000, "BinningMuonSize", "log");
+    MBinning binsM8(100,      0,     5, "BinningMuonRelTimeSigma");
+
+    MBinning binsM9(100,      0,     5, "BinningRadius");
+
+    // ---------------------------------------------------------
+
+    // Filter to start muon analysis
+    //MFDataPhrase fmuon1("MHillas.fSize>150 && MNewImagePar.fConcCOG<0.1", "MuonPreCut");
+    // Filter to calculate further muon parameters
+//    MFDataPhrase fmuon2("(MMuonSearchPar.fRadius*MGeomCam.fConvMm2Deg>0.6) && (MMuonSearchPar.fRadius*MGeomCam.fConvMm2Deg<1.35) &&"
+//                        "(MMuonSearchPar.fDeviation*MGeomCam.fConvMm2Deg<0.152)", "MuonSearchCut");
+    MFDataPhrase fmuon2("MMuonSearchPar.fDeviation*MGeomCam.fConvMm2Deg>0.015 &&"
+                        "MMuonSearchPar.fDeviation*MGeomCam.fConvMm2Deg>(MMuonSearchPar.fRadius*MGeomCam.fConvMm2Deg-0.1)*0.15/0.4",
+                        "MuonSearchCut");
+
+    // Filter to fill the MHMuonPar
+    MFDataPhrase fmuon3("MMuonCalibPar.fArcPhi>190 && MMuonCalibPar.fRelTimeSigma<3.2",
+                        "MuonFinalCut");
+    // Filter to write Muons to Muon tree
+    //MFDataMember fmuon4("MMuonCalibPar.fArcPhi", '>', -0.5, "MuonWriteCut");
+
+    // ---------------------------------------------------------
+
+    MStatusDisplay *d = new MStatusDisplay;
+
+    MTaskList tlist;
+
+    MParList plist2;
+    plist2.AddToList(&tlist);
+    plist2.AddToList(&bins1);
+    plist2.AddToList(&bins3);
+    plist2.AddToList(&bins4);
+    plist2.AddToList(&binsM1);
+    plist2.AddToList(&binsM2);
+    plist2.AddToList(&binsM3);
+    plist2.AddToList(&binsM4);
+    plist2.AddToList(&binsM5);
+    plist2.AddToList(&binsM6);
+    plist2.AddToList(&binsM7);
+    plist2.AddToList(&binsM8);
+    plist2.AddToList(&binsM9);
+
+    MMuonSetup muonsetup;
+    plist2.AddToList(&muonsetup);
+
+    MEvtLoop loop;
+    loop.SetDisplay(d);
+    loop.SetParList(&plist2);
+
+    MReadMarsFile read("Events");
+    read.DisableAutoScheme();
+    read.AddFiles(iter);
+
+    MContinue cont("MRawEvtHeader.GetTriggerID!=4", "SelectData");
+
+    MGeomApply apply;
+
+    MImgCleanStd clean(lvl1, lvl2);
+    clean.SetMethod(MImgCleanStd::kAbsolute);
+    clean.SetTimeLvl1(deltat);//17.5/*1.3*/);
+    clean.SetTimeLvl2(deltat);//17.5/*1.3*/);
+    clean.SetPostCleanType(3);
+
+    MHillasCalc hcalc;
+    hcalc.Disable(MHillasCalc::kCalcConc);
+
+    MH3 hrate("MRawRunHeader.GetFileID"/*, "MRawEvtHeader.GetTriggerID"*/);
+    hrate.SetWeight("1./TMath::Max(MRawRunHeader.GetRunLength,1)");
+    hrate.SetName("Rate");
+    hrate.SetTitle("Event rate after cleaning;File Id;Event Rate [Hz];");
+    hrate.InitLabels(MH3::kLabelsX);
+    hrate.GetHist().SetMinimum(0);
+
+    MFillH fillR(&hrate, "", "FillRate");
+
+    // ------------------ Setup histograms and fill tasks ----------------
+    MHCamEvent evtC1(0, "Cleaned",  "Average signal after Cleaning;;S [phe]");
+    MHCamEvent evtC2(0, "UsedPix",  "Fraction of Events in which Pixels are used;;Fraction");
+    MHCamEvent evtC3(8, "PulsePos", "Pulse Position of signal after cleaning;;T [ns]");
+    evtC1.SetErrorSpread(kFALSE);
+    evtC2.SetErrorSpread(kFALSE);
+    evtC2.SetThreshold(0);
+
+    MFillH fillC1(&evtC1, "MSignalCam", "FillSignalCam");
+    MFillH fillC2(&evtC2, "MSignalCam", "FillCntUsedPixels");
+    MFillH fillC3(&evtC3, "MSignalCam", "FillPulsePos");
+
+    MFillH fillD1("MHHillas",      "MHillas",      "FillHillas");
+    MFillH fillD2("MHHillasExt",   "",             "FillHillasExt");
+    MFillH fillD3("MHHillasSrc",   "MHillasSrc",   "FillHillasSrc");
+    MFillH fillD4("MHImagePar",    "MImagePar",    "FillImagePar");
+    MFillH fillD5("MHNewImagePar", "MNewImagePar", "FillNewImagePar");
+    MFillH fillD6("MHVsSize",      "MHillasSrc",   "FillVsSize");
+
+    MH3 halpha("MHillasSrc.fDist*MGeomCam.fConvMm2Deg", "fabs(MHillasSrc.fAlpha)");
+    halpha.SetName("AvsD;Dist;Alpha");
+
+    MFillH filla(&halpha);
+    filla.SetNameTab("AvsD");
+    filla.SetDrawOption("colz");
+
+    // ----------------------- Muon Analysis ----------------------
+    //writem.SetFilter(&fmuon4);
+
+    MHn mhn1;
+    mhn1.AddHist("MMuonSearchPar.fRadius*MGeomCam.fConvMm2Deg");
+    mhn1.InitName("MuonRadius");
+    mhn1.InitTitle("MuonRadius");
+
+    mhn1.AddHist("MMuonSearchPar.fDeviation*MGeomCam.fConvMm2Deg");
+    mhn1.InitName("MuonDeviation");
+    mhn1.InitTitle("MuonDeviation");
+
+    mhn1.AddHist("MMuonSearchPar.fTime");
+    mhn1.InitName("MuonTime");
+    mhn1.InitTitle("MuonTime");
+
+    mhn1.AddHist("MMuonSearchPar.fTimeRms");
+    mhn1.InitName("MuonTimeRms");
+    mhn1.InitTitle("MuonTimeRms");
+
+    MHn mhn3;
+    mhn3.AddHist("MMuonSearchPar.fRadius*MGeomCam.fConvMm2Deg","MMuonSearchPar.fDeviation*MGeomCam.fConvMm2Deg");
+    mhn3.InitName("MuonRadius;MuonRadius;MuonDeviation");
+    mhn3.InitTitle("MuonRadius");
+    mhn3.SetDrawOption("colz");
+
+    MHn mhn2;
+    mhn2.AddHist("MMuonCalibPar.fArcPhi");
+    mhn2.InitName("MuonArcPhi");
+    mhn2.InitTitle("MuonArcPhi");
+
+    mhn2.AddHist("MMuonCalibPar.fArcWidth");
+    mhn2.InitName("MuonArcWidth");
+    mhn2.InitTitle("MuonArcWidth");
+
+    mhn2.AddHist("MMuonCalibPar.fMuonSize");
+    mhn2.InitName("MuonSize");
+    mhn2.InitTitle("MuonSize");
+
+    mhn2.AddHist("MMuonCalibPar.fRelTimeSigma");
+    mhn2.InitName("MuonRelTimeSigma");
+    mhn2.InitTitle("MuonRelTimeSigma");
+
+    MHn mhn4;
+    mhn4.AddHist("MMuonCalibPar.fArcPhi","MMuonCalibPar.fArcWidth");
+    mhn4.InitName("MuonArcPhi;MuonArcPhi;MuonArcWidth");
+    mhn4.InitTitle("MuonArcPhi");
+    mhn4.SetDrawOption("colz");
+
+    MFillH fillmhn1(&mhn1, "", "FillMuonSearchPar");
+    MFillH fillmhn2(&mhn2, "", "FillMuonCalibPar");
+    MFillH fillmhn3(&mhn3, "", "FillMuonDevVsRadius");
+    MFillH fillmhn4(&mhn4, "", "FillMuonWidthVsPhi");
+    fillmhn1.SetNameTab("MuonS");
+    fillmhn3.SetNameTab("DevVsRad");
+    fillmhn2.SetNameTab("MuonC");
+    fillmhn4.SetNameTab("WidthVsPhi");
+    fillmhn2.SetFilter(&fmuon2);
+    fillmhn4.SetFilter(&fmuon2);
+
+    MMuonSearchParCalc muscalc;
+    //muscalc.SetFilter(&fmuon1);
+
+    MMuonCalibParCalc mcalc;
+    mcalc.SetFilter(&fmuon2);
+
+    MFillH fillmuon("MHSingleMuon", "", "FillMuon");
+    MFillH fillmpar("MHMuonPar",    "", "FillMuonPar");
+    fillmuon.SetFilter(&fmuon2);
+    fillmpar.SetFilter(&fmuon3);
+    fillmuon.SetBit(MFillH::kDoNotDisplay);
+
+    // ---------------------------------------------------------------
+
+    MWriteRootFile write(2, rule, "RECREATE", "Image parameters"); // EffectiveOnTime
+    write.AddContainer("MTime",           "Events");
+    write.AddContainer("MHillas",         "Events");
+    write.AddContainer("MHillasExt",      "Events");
+    write.AddContainer("MHillasSrc",      "Events");
+    write.AddContainer("MImagePar",       "Events");
+    write.AddContainer("MNewImagePar",    "Events");
+    write.AddContainer("MRawEvtHeader",   "Events");
+    write.AddContainer("MRawRunHeader",   "RunHeaders");
+    write.AddContainer("MGeomCam",        "RunHeaders");
+
+    MFDataPhrase fmuonhn("MMuonCalibPar.fRelTimeSigma>=0",
+                         "MuonHistCut");
+    fillmhn2.SetFilter(&fmuonhn);
+
+    tlist.AddToList(&read);
+    tlist.AddToList(&cont);
+    tlist.AddToList(&apply);
+    tlist.AddToList(&clean);
+    tlist.AddToList(&hcalc);
+    tlist.AddToList(&fillC1);
+    tlist.AddToList(&fillC2);
+    tlist.AddToList(&fillC3);
+    tlist.AddToList(&fillR);
+    tlist.AddToList(&fillD1);
+    tlist.AddToList(&fillD2);
+    tlist.AddToList(&fillD3);
+    tlist.AddToList(&fillD4);
+    tlist.AddToList(&fillD5);
+    tlist.AddToList(&fillD6);
+    tlist.AddToList(&filla);
+    //tlist.AddToList(&fmuon1);
+    tlist.AddToList(&muscalc);
+    tlist.AddToList(&fillmhn1);
+    tlist.AddToList(&fillmhn3);
+    tlist.AddToList(&fmuon2);
+    tlist.AddToList(&fillmuon);
+    tlist.AddToList(&mcalc);
+    tlist.AddToList(&fmuonhn);
+    tlist.AddToList(&fillmhn2);
+    tlist.AddToList(&fillmhn4);
+    tlist.AddToList(&fmuon3);
+    tlist.AddToList(&fillmpar);
+    //tlist.AddToList(&fmuon4);
+    //tlist.AddToList(&writem);
+    tlist.AddToList(&write);
+
+    if (!loop.Eventloop())
+        return 3;
+
+    if (!loop.GetDisplay())
+        return 4;
+
+    TString title = "--  Image parameters #";
+    title += seq.GetSequence();
+    title += "  --";
+    d->SetTitle(title, kFALSE);
+
+    TString path;
+    path += Form("%s/20%06d_%03d-images.root", outpath,
+                 seq.GetSequence()/1000, seq.GetSequence()%1000);
+
+    d->SaveAs(path);
+
+    return 0;
+}
