Index: trunk/MagicSoft/Mars/macros/ONAnalysis.C
===================================================================
--- trunk/MagicSoft/Mars/macros/ONAnalysis.C	(revision 2746)
+++ trunk/MagicSoft/Mars/macros/ONAnalysis.C	(revision 2746)
@@ -0,0 +1,3452 @@
+
+//#include "MagicEgyEst.C"
+
+void InitBinnings(MParList *plist)
+{
+        gLog << "InitBinnings" << endl;
+
+        //--------------------------------------------
+        MBinning *binse = new MBinning("BinningE");
+        //binse->SetEdgesLog(30, 1.0e2, 1.0e5);
+
+	//This is Daniel's binning in energy:
+        binse->SetEdgesLog(14, 296.296, 86497.6);
+        plist->AddToList(binse);
+
+        //--------------------------------------------
+
+        MBinning *binssize = new MBinning("BinningSize");
+        binssize->SetEdgesLog(50, 10, 1.0e5);
+        plist->AddToList(binssize);
+
+        MBinning *binsdistc = new MBinning("BinningDist");
+        binsdistc->SetEdges(50, 0, 1.4);
+        plist->AddToList(binsdistc);
+
+        MBinning *binswidth = new MBinning("BinningWidth");
+        binswidth->SetEdges(50, 0, 1.0);
+        plist->AddToList(binswidth);
+
+        MBinning *binslength = new MBinning("BinningLength");
+        binslength->SetEdges(50, 0, 1.0);
+        plist->AddToList(binslength);
+
+        MBinning *binsalpha = new MBinning("BinningAlpha");
+        binsalpha->SetEdges(100, -100, 100);
+        plist->AddToList(binsalpha);
+
+        MBinning *binsasym = new MBinning("BinningAsym");
+        binsasym->SetEdges(50, -1.5, 1.5);
+        plist->AddToList(binsasym);
+
+        MBinning *binsm3l = new MBinning("BinningM3Long");
+        binsm3l->SetEdges(50, -1.5, 1.5);
+        plist->AddToList(binsm3l);
+
+        MBinning *binsm3t = new MBinning("BinningM3Trans");
+        binsm3t->SetEdges(50, -1.5, 1.5);
+        plist->AddToList(binsm3t);
+
+   
+        //.....
+        MBinning *binsb = new MBinning("BinningSigmabar");
+        binsb->SetEdges( 100,  0.0,  5.0);
+        plist->AddToList(binsb);
+
+        MBinning *binth = new MBinning("BinningTheta");
+        // this is Daniel's binning in theta
+        //Double_t yedge[8] = 
+        //  {9.41, 16.22, 22.68, 28.64, 34.03, 38.84, 43.08, 44.99};
+        // this is our binning
+        Double_t yedge[9] = 
+                       {0.0, 17.5, 23.5, 29.5, 35.5, 42., 50., 60., 70.};
+        TArrayD yed;
+        yed.Set(9,yedge);
+        binth->SetEdges(yed);
+        plist->AddToList(binth);
+
+        MBinning *bincosth = new MBinning("BinningCosTheta");
+        Double_t zedge[9]; 
+        for (Int_t i=0; i<9; i++)
+	{
+          zedge[8-i] = cos(yedge[i]/kRad2Deg);
+	}
+        TArrayD zed;
+        zed.Set(9,zedge);
+        bincosth->SetEdges(zed);
+        plist->AddToList(bincosth);
+
+        MBinning *binsdiff = new MBinning("BinningDiffsigma2");
+        binsdiff->SetEdges(100, -5.0, 20.0);
+        plist->AddToList(binsdiff);
+
+        // robert ----------------------------------------------
+        MBinning *binsalphaf = new MBinning("BinningAlphaFlux");
+        binsalphaf->SetEdges(100, -100, 100);
+        plist->AddToList(binsalphaf);
+
+	MBinning *binsdifftime = new MBinning("BinningTimeDiff");
+	binsdifftime->SetEdges(50, 0, 10);
+	plist->AddToList(binsdifftime);
+
+	MBinning *binstime = new MBinning("BinningTime");
+	binstime->SetEdges(50, 44500, 61000);
+	plist->AddToList(binstime);
+}
+
+
+void DeleteBinnings(MParList *plist)
+{
+        gLog << "DeleteBinnings" << endl;
+
+        TObject *bin;
+
+        //--------------------------------------------
+        bin = plist->FindObject("BinningE");
+        if (bin) delete bin;
+
+        //--------------------------------------------
+
+        bin = plist->FindObject("BinningSize");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningDist");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningWidth");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningLength");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningAlpha");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningAsym");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningM3Long");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningM3Trans");
+        if (bin) delete bin;
+
+        //.....
+        bin = plist->FindObject("BinningSigmabar");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningTheta");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningCosTheta");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningDiffsigma2");
+        if (bin) delete bin;
+
+
+        // robert ----------------------------------------------
+        bin = plist->FindObject("BinningAlphaFlux");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningTimeDiff");
+        if (bin) delete bin;
+
+        bin = plist->FindObject("BinningTime");
+        if (bin) delete bin;
+}
+
+
+//************************************************************************
+void ONAnalysis()
+{
+
+  gLog << "Entry ONAnalysis()" << endl;
+
+      gLog.SetNoColors();
+
+      if (gRandom)
+        delete gRandom;
+      gRandom = new TRandom3(0);
+
+      //-----------------------------------------------
+      const char *offfile = 
+      "/.magic/data14a/crab_2003Nov/rootdata/2003_11_29/*OffCrab1*.root"; 
+
+      const char *onfile  = 
+      "/.magic/data14a/crab_2003Nov/rootdata/2003_11_29/*Crab-Nebula*.root"; 
+      const char *onfile1  = 
+      "/.magic/data14a/crab_2003Nov/rootdata/2003_11_30/*CrabNebula*.root"; 
+
+      const char *mcfile  = 
+            "/data/MAGIC/mc_eth/magLQE_3/gh/0/0/G_M0_00_0_550*.root";
+      //-----------------------------------------------
+
+      // path for input for Mars
+      TString inPath =  "/.magic/data14a/wittek/ONAnalysis/";
+
+      // path for output from Mars
+      TString outPath = "/.magic/data14a/wittek/ONAnalysis/";
+
+      //-----------------------------------------------
+
+      //TEnv env("macros/CT1env.rc");
+      //Bool_t printEnv = kFALSE;
+
+    //************************************************************************
+
+    // Job A_ON : read ON data
+    //  - generate sigmabar vs. Theta plot; 
+    //  - write root file for ON data (ON1.root);
+
+    Bool_t JobA_ON = kTRUE;  
+    Bool_t WHistON = kFALSE;   // write out histogram sigmabar vs. Theta ?
+    Bool_t WON1    = kFALSE;   // write out root file ON1.root ?
+
+
+    // Job A_MC : read MC gamma data, 
+    //  - read sigmabar vs. Theta plot from ON data  
+    //  - do padding; 
+    //  - write root file for MC gammas (MC1.root);
+
+    Bool_t JobA_MC  = kFALSE;  
+    Bool_t WMC1     = kFALSE;  // write out root file MC1.root ?
+
+
+    // Job B_RF_UP : read ON1.root (or MC1.root) file 
+    //  - if RTrainRF = TRUE : read in training matrices for hadrons and gammas
+    //  - if CTrainRF = TRUE : create  training matrices for hadrons and gammas
+    //  - if RTree    = TRUE : read in trees, otherwise create trees
+    //  - calculate hadroness for method of RANDOM FOREST
+    //  - update the input files with the hadroness (==>ON2.root or MC2.root)
+
+    Bool_t JobB_RF_UP  = kFALSE;  
+    Bool_t CTrainRF    = kFALSE;  // create matrices of training events
+    Bool_t RTrainRF    = kFALSE;  // read in matrices of training events
+    Bool_t RTree       = kFALSE;  // read in trees (otherwise grow them)
+    Bool_t WRF         = kFALSE;  // update input root file ?
+
+
+
+
+    // Job B_SC_UP : read ON2.root (or MC2.root) file 
+    //  - depending on WParSC : create (or read in) supercuts parameter values
+    //  - calculate hadroness for the SUPERCUTS
+    //  - update the input files with the hadroness (==>ON3.root or MC3.root)
+
+    Bool_t JobB_SC_UP  = kFALSE;
+    Bool_t CMatrix     = kFALSE;  // create training and test matrices 
+    Bool_t RMatrix     = kFALSE;  // read training and test matrices from file
+    Bool_t WOptimize   = kFALSE;  // do optimization using the training sample
+                                  // and write supercuts parameter values 
+                                  // onto the file parSCfile
+    Bool_t RTest       = kFALSE;  // test the supercuts using the test matrix
+    Bool_t WSC         = kFALSE;  // update input root file ?
+
+
+
+    // Job C: 
+    //  - read ON3.root and MC3.root files
+    //    which should have been updated to contain the hadronnesses  
+    //    for the method of 
+    //              RF
+    //              SUPERCUTS and
+    //  - produce Neyman-Pearson plots
+
+    Bool_t JobC  = kFALSE;  
+
+
+    // Job D :  
+    //  - select g/h separation method XX
+    //  - read ON3 (or MC3) root file
+    //  - apply cuts in hadronness
+    //  - make plots
+
+    Bool_t JobD  = kFALSE;  
+
+
+
+
+    // Job E_XX : extended version of E_XX (including flux plots)  
+    //  - select g/h separation method XX
+    //  - read MC root file 
+    //  - calculate eff. collection area
+    //  - optimize energy estimator
+    //  - read ON root file 
+    //  - apply final cuts
+    //  - calculate flux
+    //  - write root file for ON data after final cuts 
+
+
+    Bool_t JobE_XX  = kFALSE;  
+    Bool_t CCollArea= kFALSE;  // calculate eff. collection areas
+    Bool_t OEEst    = kFALSE;  // optimize energy estimator
+    Bool_t WEX      = kFALSE;  // update root file  ?
+    Bool_t WRobert  = kFALSE;  // write out Robert's file  ?
+
+
+
+    //************************************************************************
+
+    
+  //---------------------------------------------------------------------
+  // Job A_ON
+  //=========
+    // read ON data file 
+
+    //  - produce the 2D-histogram "sigmabar versus Theta" 
+    //    (SigmaTheta_ON.root) for ON data
+    //    (to be used for the padding of the MC gamma data)
+
+    //  - write a file of ON events (ON1.root) 
+    //    (after the standard cuts, before the g/h separation)
+    //    (to be used together with the corresponding MC gamma file (MC1.root)
+    //     for the optimization of the g/h separation)
+
+
+ if (JobA_ON)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job A_ON" << endl;
+    gLog << "" << endl;
+    gLog << "Macro ONAnalysis : JobA_ON, WHistON, WON1 = " 
+         << (JobA_ON ? "kTRUE" : "kFALSE")  << ",  " 
+         << (WHistON ? "kTRUE" : "kFALSE")  << ",  " 
+         << (WON1    ? "kTRUE" : "kFALSE")  << endl;
+
+
+    // name of input root file
+    TString filenamein(onfile);
+    TString filenamein1(onfile1);
+
+    // name of output root file
+    TString outNameImage = outPath;
+    outNameImage += "ON";
+    outNameImage += "1.root";
+
+    //--------------------------------------------------
+    // use for padding sigmabar vs. Theta from ON data
+    TString typeHist = "ON";
+    gLog << "typeHist = " << typeHist << endl;
+
+    // name of file to conatin the histograms for the padding
+    TString outNameSigTh = outPath;
+    outNameSigTh += "SigmaTheta_";
+    outNameSigTh += typeHist;
+    outNameSigTh += ".root";
+
+
+    //-----------------------------------------------------------
+    MTaskList tliston;
+    MParList pliston;
+
+    char *sourceName = "MSrcPosCam";
+    MSrcPosCam source(sourceName);
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    TFile test("/.magic/data14a/crab_2003Nov/rootdata/2003_11_29/20031128_03127_P_Crab-Nebula_E.root");
+    test.ls();
+
+    //MCT1ReadPreProc read(filenamein);
+    MReadMarsFile  read("Events", filenamein);
+    read.ls();
+    read.AddFile(filenamein1);    
+    read.DisableAutoScheme();
+
+    //---------------------
+    MF selectCrabNebula
+        ("(MRawRunHeader.fRunNumber>3126 && MRawRunHeader.fRunNumber<3216)||(MRawRunHeader.fRunNumber>3283 && MRawRunHeader.fRunNumber<3335)||(MRawRunHeader.fRunNumber>3339 && MRawRunHeader.fRunNumber<3417)");
+    selectCrabNebula.SetInverted();
+
+    MF selectOffCrab1
+        ("(MRawRunHeader.fRunNumber>3215 && MRawRunHeader.fRunNumber<3275)||(MRawRunHeader.fRunNumber>3416 && MRawRunHeader.fRunNumber<3444)");
+    selectOffCrab1.SetInverted();
+
+    MF selectMrk421
+        ("(MRawRunHeader.fRunNumber>3443 && MRawRunHeader.fRunNumber<3490)");
+    selectMrk421.SetInverted();
+                
+    MContinue contCrabNebula(&selectCrabNebula);
+    MContinue contOffCrab1(&selectOffCrab1);
+    MContinue contMrk421(&selectMrk421);
+
+
+    //..............................
+    MGeomApply        apply;
+    MMcPedestalCopy   pcopy;
+    MMcPedestalNSBAdd pnsb;
+
+    MPedestalWorkaround waround;
+
+    // a way to find out whether one is dealing with MC :
+    MFDataMember fMC("MRawRunHeader.fRunType", '>', 255.5);  // MC
+    fMC.SetName("Select MC");
+    MFDataMember fDa("MRawRunHeader.fRunType", '<', 255.5);  // data
+    fDa.SetName("Select Data");
+
+    MCerPhotCalc      ncalc;
+    ncalc.SetFilter(&fMC);
+    MCerPhotAnal2     nanal;
+    nanal.SetFilter(&fDa);
+    //..............................
+
+
+    //MPointingCorrCalc pointcorr(sourceName, "MPointingCorrCalc", 
+    //                                         "MPointingCorrCalc");
+    MBlindPixelCalc blind;
+    blind.SetUseBlindPixels();
+
+    MFSelBasic selbasic;
+    MContinue contbasic(&selbasic);
+    contbasic.SetName("SelBasic");
+
+    MFillH fillblind("BlindPixels[MHBlindPixels]", "MBlindPixels");
+    fillblind.SetName("HBlind");
+
+    MSigmabarCalc sigbarcalc;
+
+    MFillH fillsigtheta ("SigmaTheta[MHSigmaTheta]", "MMcEvt");
+    fillsigtheta.SetName("HSigmaTheta");
+
+    MImgCleanStd    clean; 
+
+
+    // calculation of  image parameters ---------------------
+    TString fHilName    = "MHillas";
+    TString fHilNameExt = "MHillasExt";
+    TString fHilNameSrc = "MHillasSrc";
+    TString fImgParName = "MNewImagePar";
+
+    MHillasCalc    hcalc;
+    hcalc.SetNameHillas(fHilName);
+    hcalc.SetNameHillasExt(fHilNameExt);
+    hcalc.SetNameNewImgPar(fImgParName);
+
+    MHillasSrcCalc hsrccalc(sourceName, fHilNameSrc);
+    hsrccalc.SetInput(fHilName);
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",   fHilNameSrc);
+    hfill3.SetName("HHillasExt");
+
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");
+    // --------------------------------------------------
+
+    MFSelStandard selstandard(fHilNameSrc);
+    selstandard.SetHillasName(fHilName);
+    selstandard.SetImgParName(fImgParName);
+    selstandard.SetCuts(92, 4, 60, 0.4, 1.05, 0.0, 0.0);
+    MContinue contstandard(&selstandard);
+    contstandard.SetName("SelStandard");
+
+      //MWriteRootFile &write = *(new MWriteRootFile(outNameImage));
+      MWriteRootFile write(outNameImage, "RECREATE");
+
+      write.AddContainer("MRawRunHeader", "RunHeaders");
+      write.AddContainer("MTime",         "Events");
+      write.AddContainer("MMcEvt",        "Events");
+      write.AddContainer("ThetaOrig",     "Events");
+      write.AddContainer("MSrcPosCam",    "Events");
+      write.AddContainer("MSigmabar",     "Events");
+      write.AddContainer("MHillas",       "Events");
+      write.AddContainer("MHillasExt",    "Events");
+      write.AddContainer("MHillasSrc",    "Events");
+      write.AddContainer("MNewImagePar",  "Events");
+
+
+    //$$$$$$$$$$$$$$$$$$$$$$$$$$$$
+    //MF daniel( "(MRawRunHeader.fRunNumber<13167)||(MRawRunHeader.fRunNumber>13167)" );
+    //MContinue contdaniel(&daniel);
+    //$$$$$$$$$$$$$$$$$$$$$$$$$$$$
+
+
+    //*****************************
+    // entries in MParList
+    
+    pliston.AddToList(&tliston);
+    InitBinnings(&pliston);
+
+    pliston.AddToList(&source);
+
+
+    //*****************************
+    // entries in MTaskList
+    
+    tliston.AddToList(&read);
+    tliston.AddToList(&contCrabNebula);
+
+    //......................
+    tliston.AddToList(&fMC);
+    tliston.AddToList(&fDa);
+    tliston.AddToList(&apply);
+    tliston.AddToList(&pcopy);
+    //tliston.AddToList(&waround);
+
+    tliston.AddToList(&pnsb);
+    tliston.AddToList(&ncalc);
+    tliston.AddToList(&nanal);
+    //......................
+
+    //tliston.AddToList(&pointcorr);
+    tliston.AddToList(&blind);
+    tliston.AddToList(&contbasic);
+
+    tliston.AddToList(&fillblind);
+    tliston.AddToList(&sigbarcalc);
+    tliston.AddToList(&fillsigtheta);
+    tliston.AddToList(&clean);
+
+    tliston.AddToList(&hcalc);
+    tliston.AddToList(&hsrccalc);
+
+    tliston.AddToList(&hfill1);
+    tliston.AddToList(&hfill2);
+    tliston.AddToList(&hfill3);
+    tliston.AddToList(&hfill4);
+    tliston.AddToList(&hfill5);
+
+    tliston.AddToList(&contstandard);
+    if (WON1)
+      tliston.AddToList(&write);
+
+    //*****************************
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetParList(&pliston);
+    //evtloop.ReadEnv(env, "", printEnv);
+    evtloop.SetProgressBar(&bar);
+    //if (WON1)
+    //  evtloop.Write();
+
+    Int_t maxevents = -1;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tliston.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+
+    pliston.FindObject("SigmaTheta", "MHSigmaTheta")->DrawClone();
+
+    pliston.FindObject("BlindPixels", "MHBlindPixels")->DrawClone();
+
+    pliston.FindObject("MHHillas")->DrawClone();
+    pliston.FindObject("MHHillasExt")->DrawClone();
+    pliston.FindObject("MHHillasSrc")->DrawClone();
+    pliston.FindObject("MHNewImagePar")->DrawClone();
+    pliston.FindObject("MHStarMap")->DrawClone();
+
+
+
+    //-------------------------------------------
+    // Write histograms onto a file
+  if (WHistON)
+  {
+      MHSigmaTheta *sigtheta = 
+            (MHSigmaTheta*)pliston.FindObject("SigmaTheta");
+
+      MHBlindPixels *blindpixels = 
+            (MHBlindPixels*)pliston.FindObject("BlindPixels");
+      if (!sigtheta  ||  !blindpixels)
+	{
+          gLog << "Object 'SigmaTheta' or 'BlindPixels' not found" << endl;
+          return;
+	}
+      TH2D *fHSigTh    = sigtheta->GetSigmaTheta();
+      TH3D *fHSigPixTh = sigtheta->GetSigmaPixTheta();
+      TH3D *fHDifPixTh = sigtheta->GetDiffPixTheta();
+
+      TH2D *fHBlindId  = blindpixels->GetBlindId();
+      TH2D *fHBlindN   = blindpixels->GetBlindN();
+
+
+      TFile outfile(outNameSigTh, "RECREATE");
+      fHSigTh->Write();
+      fHSigPixTh->Write();
+      fHDifPixTh->Write();
+     
+      fHBlindId->Write();
+      fHBlindN->Write();
+
+      gLog << "" << endl;
+      gLog << "File " << outNameSigTh << " was written out" << endl;
+  }
+
+
+    DeleteBinnings(&pliston);
+
+    gLog << "Macro ONAnalysis : End of Job A_ON" << endl;
+    gLog << "===================================================" << endl;
+ }
+
+
+  //---------------------------------------------------------------------
+   // Job A_MC
+   //=========
+
+    // read MC gamma data  
+
+    //    - to pad them
+    //      (using the 2D-histogram "sigmabar versus Theta" 
+    //       (SigmaTheta_ON.root)  of the ON data)
+
+    //    - to write a file of padded MC gamma events (MC1.root)
+    //      (after the standard cuts, before the g/h separation)
+    //      (to be used together with the corresponding hadron file
+    //       for the optimization of the g/h separation)
+
+
+ if (JobA_MC)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job A_MC" << endl;
+
+    gLog << "" << endl;
+    gLog << "Macro ONAnalysis : JobA_MC, WMC1 = " 
+         << (JobA_MC ? "kTRUE" : "kFALSE")  << ",  " 
+         << (WMC1    ? "kTRUE" : "kFALSE")  << endl;
+
+
+    // name of input root file
+    TString filenamein(mcfile);
+
+    // name of output root file
+    TString outNameImage = outPath;
+    outNameImage += "MC";
+    outNameImage += "1.root";
+
+    //------------------------------------------------
+    // use for padding sigmabar vs. Theta from ON data
+    TString typeHist = "ON";
+    gLog << "typeHist = " << typeHist << endl;
+
+    // name of file containing the histograms for the padding
+    TString outNameSigTh = outPath;
+    outNameSigTh += "SigmaTheta_";
+    outNameSigTh += typeHist;
+    outNameSigTh += ".root";
+
+
+    //------------------------------------
+    // Get the histograms "2D-ThetaSigmabar"
+    // and                "3D-ThetaPixSigma"
+    // and                "3D-ThetaPixDiff"
+    // and                "2D-IdBlindPixels"
+    // and                "2D-NBlindPixels"
+
+
+      gLog << "Reading in file " << outNameSigTh << endl;
+
+      TFile *infile = new TFile(outNameSigTh);
+      infile->ls();
+
+      TH2D *fHSigmaTheta = 
+      (TH2D*) gROOT->FindObject("2D-ThetaSigmabar");
+      if (!fHSigmaTheta)
+	{
+          gLog << "Object '2D-ThetaSigmabar' not found on root file" << endl;
+          return;
+	}
+      gLog << "Object '2D-ThetaSigmabar' was read in" << endl;
+
+      TH3D *fHSigmaPixTheta = 
+      (TH3D*) gROOT->FindObject("3D-ThetaPixSigma");
+      if (!fHSigmaPixTheta)
+	{
+          gLog << "Object '3D-ThetaPixSigma' not found on root file" << endl;
+          return;
+	}
+      gLog << "Object '3D-ThetaPixSigma' was read in" << endl;
+
+      TH3D *fHDiffPixTheta = 
+      (TH3D*) gROOT->FindObject("3D-ThetaPixDiff");
+      if (!fHDiffPixTheta)
+	{
+          gLog << "Object '3D-ThetaPixDiff' not found on root file" << endl;
+          return;
+	}
+      gLog << "Object '3D-ThetaPixDiff' was read in" << endl;
+
+
+      TH2D *fHIdBlindPixels = 
+      (TH2D*) gROOT->FindObject("2D-IdBlindPixels");
+      if (!fHIdBlindPixels)
+	{
+          gLog << "Object '2D-IdBlindPixels' not found on root file" << endl;
+          return;
+	}
+      gLog << "Object '2D-IdBlindPixels' was read in" << endl;
+
+      TH2D *fHNBlindPixels = 
+      (TH2D*) gROOT->FindObject("2D-NBlindPixels");
+      if (!fHNBlindPixels)
+	{
+          gLog << "Object '2D-NBlindPixels' not found on root file" << endl;
+          return;
+	}
+      gLog << "Object '2D-NBlindPixels' was read in" << endl;
+
+    //------------------------------------
+
+    MTaskList tlist;
+    MParList plist;
+
+    char *sourceName = "MSrcPosCam";
+    MSrcPosCam source(sourceName);
+
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)plist->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    //MCT1ReadPreProc read(filenamein);
+    MReadMarsFile  read("Events", filenamein);
+    read.DisableAutoScheme();
+
+    //..............................
+    MGeomApply        apply;
+    MMcPedestalCopy   pcopy;
+    MMcPedestalNSBAdd pnsb;
+
+    MPedestalWorkaround waround;
+
+    // a way to find out whether one is dealing with MC :
+    MFDataMember fMC("MRawRunHeader.fRunType", '>', 255.5);  // MC
+    fMC.SetName("Select MC");
+    MFDataMember fDa("MRawRunHeader.fRunType", '<', 255.5);  // data
+    fDa.SetName("Select Data");
+
+    MCerPhotCalc      ncalc;
+    ncalc.SetFilter(&fMC);
+    MCerPhotAnal2     nanal;
+    nanal.SetFilter(&fDa);
+    //..............................
+
+    MBlindPixelCalc blindbeforepad;
+    blindbeforepad.SetUseBlindPixels();
+    blindbeforepad.SetName("BlindBeforePadding");
+
+    MBlindPixelCalc blind;
+    blind.SetUseBlindPixels();
+    blind.SetName("BlindAfterPadding");
+
+    MFSelBasic selbasic;
+    MContinue contbasic(&selbasic);
+    contbasic.SetName("SelBasic");
+
+
+    // There are 2 options for Thomas Schweizer's padding
+    //     fPadFlag = 1   get Sigmabar from fHSigmaTheta
+    //                    and Sigma    from fHDiffPixTheta
+    //     fPadFlag = 2   get Sigma    from fHSigmaPixTheta
+    
+    MPadON padthomas("MPadON","Task for the padding");
+    padthomas.SetHistograms(fHSigmaTheta, fHSigmaPixTheta, fHDiffPixTheta,
+                            fHIdBlindPixels, fHNBlindPixels);
+    padthomas.SetPadFlag(1);
+
+    MFillH fillblind("MCBlindPixels[MHBlindPixels]", "MBlindPixels");
+    fillblind.SetName("HBlind");
+
+
+    //...........................................
+
+    MSigmabarCalc sigbarcalc;
+
+    MFillH fillsigtheta ("MCSigmaTheta[MHSigmaTheta]", "MMcEvt");
+    fillsigtheta.SetName("HSigmaTheta");
+
+    MImgCleanStd    clean; 
+
+    // calculation of  image parameters ---------------------
+    TString fHilName    = "MHillas";
+    TString fHilNameExt = "MHillasExt";
+    TString fHilNameSrc = "MHillasSrc";
+    TString fImgParName = "MNewImagePar";
+
+    MHillasCalc    hcalc;
+    hcalc.SetNameHillas(fHilName);
+    hcalc.SetNameHillasExt(fHilNameExt);
+    hcalc.SetNameNewImgPar(fImgParName);
+
+    MHillasSrcCalc hsrccalc(sourceName, fHilNameSrc);
+    hsrccalc.SetInput(fHilName);
+
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",   fHilNameSrc);
+    hfill3.SetName("HHillasExt");
+
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");
+    // --------------------------------------------------
+
+    MFSelStandard selstandard(fHilNameSrc);
+    selstandard.SetHillasName(fHilName);
+    selstandard.SetImgParName(fImgParName);
+    selstandard.SetCuts(92, 4, 60, 0.4, 1.05, 0.0, 0.0);
+    MContinue contstandard(&selstandard);
+    contstandard.SetName("SelStandard");
+
+
+      //MWriteRootFile &write = *(new MWriteRootFile(outNameImage));
+      MWriteRootFile write(outNameImage, "RECREATE");
+
+      write.AddContainer("MRawRunHeader", "RunHeaders");
+      write.AddContainer("MTime",         "Events");
+      write.AddContainer("MMcEvt",        "Events");
+      write.AddContainer("ThetaOrig",     "Events");
+      write.AddContainer("MSrcPosCam",    "Events");
+      write.AddContainer("MSigmabar",     "Events");
+      write.AddContainer("MHillas",       "Events");
+      write.AddContainer("MHillasExt",    "Events");
+      write.AddContainer("MHillasSrc",    "Events");
+      write.AddContainer("MNewImagePar",  "Events");
+
+
+
+    //*****************************
+    // entries in MParList
+
+    plist.AddToList(&tlist);
+    InitBinnings(&plist);
+
+    plist.AddToList(&source);
+
+
+    //*****************************
+    // entries in MTaskList
+
+    tlist.AddToList(&read);
+
+    //......................
+    tlist.AddToList(&fMC);
+    tlist.AddToList(&fDa);
+    tlist.AddToList(&apply);
+    tlist.AddToList(&pcopy);
+    //tlist.AddToList(&waround);
+
+    tlist.AddToList(&pnsb);
+    tlist.AddToList(&ncalc);
+    tlist.AddToList(&nanal);
+    //......................
+
+    tlist.AddToList(&blindbeforepad);
+    tlist.AddToList(&padthomas);
+    tlist.AddToList(&blind);
+
+    tlist.AddToList(&contbasic);
+    tlist.AddToList(&fillblind);
+    tlist.AddToList(&sigbarcalc);
+    tlist.AddToList(&fillsigtheta);
+    tlist.AddToList(&clean);
+
+    tlist.AddToList(&hcalc);
+    tlist.AddToList(&hsrccalc);
+
+    tlist.AddToList(&hfill1);
+    tlist.AddToList(&hfill2);
+    tlist.AddToList(&hfill3);
+    tlist.AddToList(&hfill4);
+    tlist.AddToList(&hfill5);
+
+    tlist.AddToList(&contstandard);
+    if (WMC1)
+      tlist.AddToList(&write);
+
+    //*****************************
+
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetParList(&plist);
+    //evtloop.ReadEnv(env, "", printEnv);
+    evtloop.SetProgressBar(&bar);
+    //if (WMC1)    
+    //  evtloop.Write();
+
+    Int_t maxevents = -1;
+    //Int_t maxevents = 1000;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tlist.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+    //
+
+    plist.FindObject("MCSigmaTheta",  "MHSigmaTheta")->DrawClone();
+    plist.FindObject("MCBlindPixels", "MHBlindPixels")->DrawClone();
+
+    plist.FindObject("MHHillas")->DrawClone();
+    plist.FindObject("MHHillasExt")->DrawClone();
+    plist.FindObject("MHHillasSrc")->DrawClone();
+    plist.FindObject("MHNewImagePar")->DrawClone();
+    plist.FindObject("MHStarMap")->DrawClone();
+
+
+
+    DeleteBinnings(&plist);
+
+    gLog << "Macro ONAnalysis : End of Job A_MC" 
+         << endl;
+    gLog << "=========================================================" 
+         << endl;
+ }
+
+
+
+  //---------------------------------------------------------------------
+  // Job B_RF_UP
+  //============
+
+
+    //  - create (or read in) the matrices of training events for gammas 
+    //    and hadrons
+    //  - create (or read in) the trees
+    //  - then read ON1.root (or MC1.root) file 
+    //  - calculate the hadroness for the method of RANDOM FOREST
+    //  - update input root file with the hadroness
+
+
+ if (JobB_RF_UP)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job B_RF_UP" << endl;
+
+    gLog << "" << endl;
+    gLog << "Macro ONAnalysis : JobB_RF_UP, RTrainRF, CTrainRF, RTree, WRF = "
+         << (JobB_RF_UP ? "kTRUE" : "kFALSE")  << ",  " 
+         << (RTrainRF ?   "kTRUE" : "kFALSE")  << ",  " 
+         << (CTrainRF ?   "kTRUE" : "kFALSE")  << ",  " 
+         << (RTree ?      "kTRUE" : "kFALSE")  << ",  "
+         << (WRF ?        "kTRUE" : "kFALSE")  << endl;
+
+
+    //--------------------------------------------
+    // parameters for the random forest
+    Int_t NumTrees = 100;
+    Int_t NumTry   =   3;
+    Int_t NdSize   =   1;
+
+
+    TString hadRFName = "HadRF";
+    Float_t maxhadronness =  0.23;
+    Float_t maxalpha      =  20.0;
+    Float_t maxdist       =  10.0;
+
+    TString fHilName    = "MHillas"; 
+    TString fHilNameExt = "MHillasExt"; 
+    TString fHilNameSrc = "MHillasSrc"; 
+    TString fImgParName = "MNewImagePar"; 
+
+
+    TString extin  = "1.root";
+    TString extout = "2.root";
+
+    //--------------------------------------------
+    // for the analysis using ON data only set typeMatrixHadrons = "ON"
+    //                        ON and OFF data                    = "OFF"
+    TString typeMatrixHadrons = "ON";
+    gLog << "typeMatrixHadrons = " << typeMatrixHadrons << endl;
+
+
+    // file to be updated (ON, OFF or MC)
+
+    //TString typeInput = "ON";
+    TString typeInput = "OFF";
+    //TString typeInput = "MC";
+    gLog << "typeInput = " << typeInput << endl;
+
+    // name of input root file
+    TString NameData = outPath;
+    NameData += typeInput;
+    TString inNameData(NameData);
+    inNameData += extin;
+    gLog << "inNameData = " << inNameData << endl; 
+
+    // name of output root file
+    TString outNameData(NameData);
+    outNameData += extout;
+    gLog << "outNameData = " << outNameData << endl; 
+
+    //--------------------------------------------
+    // files to be read for generating 
+    //    - the matrices of training events
+    //    - and the root files of training and test events
+
+
+    // "hadrons" :
+    TString filenameHad = outPath;
+    filenameHad += typeMatrixHadrons;
+    filenameHad += extin;
+    Int_t howManyHadronsTrain = 12000;
+    Int_t howManyHadronsTest  = 12000;
+    gLog << "filenameHad = "    << filenameHad << ",   howManyHadronsTrain = "
+         << howManyHadronsTrain << ",   howManyHadronsTest = "
+         << howManyHadronsTest  << endl; 
+    
+
+    // "gammas" :
+    TString filenameMC = outPath;
+    filenameMC += "MC";
+    filenameMC += extin;
+    Int_t howManyGammasTrain = 12000;
+    Int_t howManyGammasTest  = 12000;
+    gLog << "filenameMC = "    << filenameMC << ",   howManyGammasTrain = "
+         << howManyGammasTrain << ",   howManyGammasTest = "
+         << howManyGammasTest  << endl; 
+    
+    //--------------------------------------------
+    // files for the matrices of training events 
+
+    TString NameGammas = outPath;
+    NameGammas += "RFmatrix_gammas_Train_";
+    NameGammas += "MC";
+    NameGammas += extin;
+
+    TString NameHadrons = outPath;
+    NameHadrons += "RFmatrix_hadrons_Train_";
+    NameHadrons += typeMatrixHadrons;
+    NameHadrons += extin;
+
+
+    //--------------------------------------------
+    // root files for the training events 
+
+    TString NameGammasTrain = outPath;
+    NameGammasTrain += "RF_gammas_Train_";
+    NameGammasTrain += "MC";
+    TString inNameGammasTrain(NameGammasTrain);    
+    inNameGammasTrain += extin;
+    TString outNameGammasTrain(NameGammasTrain);    
+    outNameGammasTrain += extout;
+
+
+    TString NameHadronsTrain = outPath;
+    NameHadronsTrain += "RF_hadrons_Train_";
+    NameHadronsTrain += typeMatrixHadrons;
+    TString inNameHadronsTrain(NameHadronsTrain);    
+    inNameHadronsTrain += extin;
+    TString outNameHadronsTrain(NameHadronsTrain);    
+    outNameHadronsTrain += extout;
+
+
+    //--------------------------------------------
+    // root files for the test events 
+
+    TString NameGammasTest = outPath;
+    NameGammasTest += "RF_gammas_Test_";
+    NameGammasTest += "MC";
+    TString inNameGammasTest(NameGammasTest);    
+    inNameGammasTest += extin;
+    TString outNameGammasTest(NameGammasTest);    
+    outNameGammasTest += extout;
+
+    TString NameHadronsTest = outPath;
+    NameHadronsTest += "RF_hadrons_Test_";
+    NameHadronsTest += typeMatrixHadrons;
+    TString inNameHadronsTest(NameHadronsTest);    
+    inNameHadronsTest += extin;
+    TString outNameHadronsTest(NameHadronsTest);    
+    outNameHadronsTest += extout;
+
+    //--------------------------------------------------------------------
+
+
+    MHMatrix matrixg("MatrixGammas");
+    matrixg.EnableGraphicalOutput();
+
+    matrixg.AddColumn("cos(MMcEvt.fTelescopeTheta)");
+    matrixg.AddColumn("MSigmabar.fSigmabar");
+    matrixg.AddColumn("log10(MHillas.fSize)");
+    matrixg.AddColumn("MHillasSrc.fDist");
+    matrixg.AddColumn("MHillas.fWidth");
+    matrixg.AddColumn("MHillas.fLength");
+    matrixg.AddColumn("log10(MHillas.fSize/(MHillas.fWidth*MHillas.fLength))");
+    matrixg.AddColumn("sgn(MHillasSrc.fCosDeltaAlpha)*(MHillasExt.fM3Long)");
+    matrixg.AddColumn("MNewImagePar.fConc");
+    matrixg.AddColumn("MNewImagePar.fLeakage1");
+
+    MHMatrix matrixh("MatrixHadrons");
+    matrixh.EnableGraphicalOutput();
+
+    matrixh.AddColumns(matrixg.GetColumns());
+
+    //--------------------------------------------
+    // file of trees of the random forest 
+
+    TString outRF = outPath;
+    outRF += "RF.root";
+
+
+   //*************************************************************************
+   // read in matrices of training events
+if (RTrainRF)
+  {
+    const char* mtxName = "MatrixGammas";
+
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << "Get matrix for (gammas)" << endl;
+    gLog << "matrix name        = " << mtxName << endl;
+    gLog << "name of root file  = " << NameGammas << endl;
+    gLog << "" << endl;
+
+
+    // read in the object with the name 'mtxName' from file 'NameGammas'
+    //
+    TFile fileg(NameGammas); 
+
+    matrixg.Read(mtxName);
+    matrixg.Print("SizeCols");
+
+
+    //***************************************************************** 
+
+    const char* mtxName = "MatrixHadrons";
+
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << " Get matrix for (hadrons)" << endl;
+    gLog << "matrix name        = " << mtxName << endl;
+    gLog << "name of root file  = " << NameHadrons << endl;
+    gLog << "" << endl;
+
+
+    // read in the object with the name 'mtxName' from file 'NameHadrons'
+    //
+    TFile fileh(NameHadrons); 
+
+    matrixh.Read(mtxName);
+    matrixh.Print("SizeCols");
+  }
+
+
+   //*************************************************************************
+   // create matrices of training events
+   // and root files of training and test events
+ 
+if (CTrainRF)
+  {
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << " Create matrices of training events and root files of training and test events" 
+         << endl;
+    gLog << " Gammas :" << endl;
+    gLog << "---------" << endl;
+
+    MParList  plistg;
+    MTaskList tlistg;
+
+    MReadMarsFile  readg("Events", filenameMC);
+    readg.DisableAutoScheme();
+
+    TString mgname("costhg");
+    MBinning bing("Binning"+mgname);
+    bing.SetEdges(10, 0., 1.0);
+
+    MH3 gref("cos(MMcEvt.fTelescopeTheta)");
+    gref.SetName(mgname);
+    MH::SetBinning(&gref.GetHist(), &bing);
+    for (Int_t i=1; i<=gref.GetNbins(); i++)
+      gref.GetHist().SetBinContent(i, 1.0);
+
+    MFEventSelector2 selectorg(gref);
+    selectorg.SetNumMax(howManyGammasTrain+howManyGammasTest);
+    selectorg.SetName("selectGammasTrainTest");
+    selectorg.SetInverted();
+    selectorg.SetUseOrigDistribution(kTRUE);
+
+    MContinue contg(&selectorg);
+    contg.SetName("ContGammas");
+
+    Double_t probg = ( (Double_t) howManyGammasTrain )
+                   / ( (Double_t)(howManyGammasTrain+howManyGammasTest) );
+    MFRandomSplit splitg(probg);
+
+    MFillH fillmatg("MatrixGammas");
+    fillmatg.SetFilter(&splitg);
+    fillmatg.SetName("fillGammas");
+
+    //-----------------------
+    // for writing the root files of training and test events
+    // for gammas
+    
+    MWriteRootFile writetraing(inNameGammasTrain, "RECREATE");
+    writetraing.SetName("WriteGammasTrain");
+    writetraing.SetFilter(&splitg);
+
+      writetraing.AddContainer("MRawRunHeader", "RunHeaders");
+      writetraing.AddContainer("MTime",         "Events");
+      writetraing.AddContainer("MMcEvt",        "Events");
+      writetraing.AddContainer("ThetaOrig",     "Events");
+      writetraing.AddContainer("MSrcPosCam",    "Events");
+      writetraing.AddContainer("MSigmabar",     "Events");
+      writetraing.AddContainer("MHillas",       "Events");
+      writetraing.AddContainer("MHillasExt",    "Events");
+      writetraing.AddContainer("MHillasSrc",    "Events");
+      writetraing.AddContainer("MNewImagePar",  "Events");
+
+    MContinue contgtrain(&splitg);
+    contgtrain.SetName("ContGammaTrain");
+
+    MWriteRootFile writetestg(inNameGammasTest, "RECREATE");
+    writetestg.SetName("WriteGammasTest");
+
+      writetestg.AddContainer("MRawRunHeader", "RunHeaders");
+      writetestg.AddContainer("MTime",         "Events");
+      writetestg.AddContainer("MMcEvt",        "Events");
+      writetestg.AddContainer("ThetaOrig",     "Events");
+      writetestg.AddContainer("MSrcPosCam",    "Events");
+      writetestg.AddContainer("MSigmabar",     "Events");
+      writetestg.AddContainer("MHillas",       "Events");
+      writetestg.AddContainer("MHillasExt",    "Events");
+      writetestg.AddContainer("MHillasSrc",    "Events");
+      writetestg.AddContainer("MNewImagePar",  "Events");
+
+    //-----------------------
+    
+    //*****************************   fill gammas   ***  
+    // entries in MParList
+    
+    plistg.AddToList(&tlistg);
+    InitBinnings(&plistg);
+
+    plistg.AddToList(&matrixg);
+
+    //*****************************
+    // entries in MTaskList
+    
+    tlistg.AddToList(&readg);
+    tlistg.AddToList(&contg);
+
+    tlistg.AddToList(&splitg);
+    tlistg.AddToList(&fillmatg);
+    tlistg.AddToList(&writetraing);
+    tlistg.AddToList(&contgtrain);
+
+    tlistg.AddToList(&writetestg);
+
+    //*****************************
+
+    MProgressBar matrixbar;
+    MEvtLoop evtloopg;
+    evtloopg.SetName("FillGammaMatrix");
+    evtloopg.SetParList(&plistg);
+    //evtloopg.ReadEnv(env, "", printEnv);
+    evtloopg.SetProgressBar(&matrixbar);
+
+    Int_t maxevents = -1;
+    if (!evtloopg.Eventloop(maxevents))
+        return;
+
+    tlistg.PrintStatistics(0, kTRUE);
+
+    matrixg.Print("SizeCols");
+    Int_t generatedgTrain = matrixg.GetM().GetNrows();
+    if ( fabs(generatedgTrain-howManyGammasTrain) > 
+                                    3.0*sqrt(howManyGammasTrain) )
+    {
+      gLog << "Macro ONAnalysis.C : no.of generated gamma training events (" 
+           << generatedgTrain << ") is incompatible with the no.of requested events (" 
+           << howManyGammasTrain << ")" << endl;   
+    }
+
+
+    Int_t generatedgTest = writetestg.GetNumExecutions();
+    if ( fabs(generatedgTest-howManyGammasTest) > 
+                                    3.0*sqrt(howManyGammasTest) )
+    {
+      gLog << "Macro ONAnalysis.C : no.of generated gamma test events (" 
+           << generatedgTest << ") is incompatible with the no.of requested events (" 
+           << howManyGammasTest << ")" << endl;   
+    }
+
+    //*****************************   fill hadrons   ***  
+    gLog << "---------------------------------------------------------------"
+         << endl;
+    gLog << " Hadrons :" << endl;
+    gLog << "----------" << endl;
+
+    MParList  plisth;
+    MTaskList tlisth;
+
+    MReadMarsFile  readh("Events", filenameHad);
+    readh.DisableAutoScheme();
+
+    TString mhname("costhh");
+    MBinning binh("Binning"+mhname);
+    binh.SetEdges(10, 0., 1.0);
+
+    //MH3 href("cos(MMcEvt.fTelescopeTheta)");
+    //href.SetName(mhname);
+    //MH::SetBinning(&href.GetHist(), &binh);
+    //for (Int_t i=1; i<=href.GetNbins(); i++)
+    //  href.GetHist().SetBinContent(i, 1.0);
+
+    //use the original distribution from the gammas
+    MH3 &href = *(selectorg.GetHistOrig());
+
+    MFEventSelector2 selectorh(href);
+    selectorh.SetNumMax(howManyHadronsTrain+howManyHadronsTest);
+    selectorh.SetName("selectHadronsTrainTest");
+    selectorh.SetInverted();
+
+    MContinue conth(&selectorh);
+    conth.SetName("ContHadrons");
+
+    Double_t probh = ( (Double_t) howManyHadronsTrain )
+                   / ( (Double_t)(howManyHadronsTrain+howManyHadronsTest) );
+    MFRandomSplit splith(probh);
+
+    MFillH fillmath("MatrixHadrons");
+    fillmath.SetFilter(&splith);
+    fillmath.SetName("fillHadrons");
+
+    //-----------------------
+    // for writing the root files of training and test events
+    // for hadrons
+    
+    MWriteRootFile writetrainh(inNameHadronsTrain, "RECREATE");
+    writetrainh.SetName("WriteHadronsTrain");
+    writetrainh.SetFilter(&splith);
+
+      writetrainh.AddContainer("MRawRunHeader", "RunHeaders");
+      writetrainh.AddContainer("MTime",         "Events");
+      writetrainh.AddContainer("MMcEvt",        "Events");
+      writetrainh.AddContainer("ThetaOrig",     "Events");
+      writetrainh.AddContainer("MSrcPosCam",    "Events");
+      writetrainh.AddContainer("MSigmabar",     "Events");
+      writetrainh.AddContainer("MHillas",       "Events");
+      writetrainh.AddContainer("MHillasExt",    "Events");
+      writetrainh.AddContainer("MHillasSrc",    "Events");
+      writetrainh.AddContainer("MNewImagePar",  "Events");
+
+    MContinue conthtrain(&splith);
+
+    MWriteRootFile writetesth(inNameHadronsTest, "RECREATE");
+    writetesth.SetName("WriteHadronsTest");
+
+      writetesth.AddContainer("MRawRunHeader", "RunHeaders");
+      writetesth.AddContainer("MTime",         "Events");
+      writetesth.AddContainer("MMcEvt",        "Events");
+      writetesth.AddContainer("ThetaOrig",     "Events");
+      writetesth.AddContainer("MSrcPosCam",    "Events");
+      writetesth.AddContainer("MSigmabar",     "Events");
+      writetesth.AddContainer("MHillas",       "Events");
+      writetesth.AddContainer("MHillasExt",    "Events");
+      writetesth.AddContainer("MHillasSrc",    "Events");
+      writetesth.AddContainer("MNewImagePar",  "Events");
+
+
+    //*****************************  
+    // entries in MParList
+    
+    plisth.AddToList(&tlisth);
+    InitBinnings(&plisth);
+
+    plisth.AddToList(&matrixh);
+
+    //*****************************
+    // entries in MTaskList
+    
+    tlisth.AddToList(&readh);
+    tlisth.AddToList(&conth);
+
+    tlisth.AddToList(&splith);
+    tlisth.AddToList(&fillmath);
+    tlisth.AddToList(&writetrainh);
+    tlisth.AddToList(&conthtrain);
+
+    tlisth.AddToList(&writetesth);
+
+    //*****************************
+
+    MProgressBar matrixbar;
+    MEvtLoop evtlooph;
+    evtlooph.SetName("FillHadronMatrix");
+    evtlooph.SetParList(&plisth);
+    //evtlooph.ReadEnv(env, "", printEnv);
+    evtlooph.SetProgressBar(&matrixbar);
+
+    Int_t maxevents = -1;
+    if (!evtlooph.Eventloop(maxevents))
+        return;
+
+    tlisth.PrintStatistics(0, kTRUE);
+
+    matrixh.Print("SizeCols");
+    Int_t generatedhTrain = matrixh.GetM().GetNrows();
+    if ( fabs(generatedhTrain-howManyHadronsTrain) > 
+                                    3.0*sqrt(howManyHadronsTrain) )
+    {
+      gLog << "Macro ONAnalysis.C : no.of generated hadron training events (" 
+           << generatedhTrain << ") is incompatible with the no.of requested events (" 
+           << howManyHadronsTrain << ")" << endl;   
+    }
+
+
+    Int_t generatedhTest = writetesth.GetNumExecutions();
+    if ( fabs(generatedhTest-howManyHadronsTest) > 
+                                    3.0*sqrt(howManyHadronsTest) )
+    {
+      gLog << "Macro ONAnalysis.C : no.of generated gamma test events (" 
+           << generatedhTest << ") is incompatible with the no.of requested events (" 
+           << howManyHadronsTest << ")" << endl;   
+    }
+
+
+    //*****************************************************  
+
+
+    // write out matrices of training events 
+
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << "Write out matrices of training events" << endl;
+
+
+      //-------------------------------------------
+      // "gammas"
+      gLog << "Gammas :" << endl;    
+      matrixg.Print("SizeCols");
+
+      TFile writeg(NameGammas, "RECREATE", "");
+      matrixg.Write();
+
+      gLog << "" << endl;
+      gLog << "Macro ONAnalysis : matrix of training events for gammas written onto file "
+           << NameGammas << endl;
+
+      //-------------------------------------------
+      // "hadrons"
+      gLog << "Hadrons :" << endl;    
+      matrixh.Print("SizeCols");
+
+      TFile writeh(NameHadrons, "RECREATE", "");
+      matrixh.Write();
+
+      gLog << "" << endl;
+      gLog << "Macro ONAnalysis : matrix of training events for hadrons written onto file "
+           << NameHadrons << endl;
+
+  }
+   //**********   end of creating matrices of training events   ***********
+
+
+    MRanForest *fRanForest;
+    MRanTree *fRanTree;
+    //-----------------------------------------------------------------
+    // read in the trees of the random forest 
+    if (RTree)
+    {
+      MParList plisttr;
+      MTaskList tlisttr;
+      plisttr.AddToList(&tlisttr);
+
+      MReadTree readtr("TREE", outRF);
+      readtr.DisableAutoScheme();
+
+      MRanForestFill rffill;
+      rffill.SetNumTrees(NumTrees);
+
+      // list of tasks for the loop over the trees
+
+      tlisttr.AddToList(&readtr);
+      tlisttr.AddToList(&rffill);
+
+      //-------------------
+      // Execute tree loop
+      //
+      MEvtLoop evtlooptr;
+      evtlooptr.SetName("ReadRFTrees");
+      evtlooptr.SetParList(&plisttr);
+      if (!evtlooptr.Eventloop())
+        return;
+
+      tlisttr.PrintStatistics(0, kTRUE);
+
+      gLog << "ONAnalysis : RF trees were read in from file "
+           << outRF << endl;
+
+    // get adresses of objects which are used in the next eventloop
+    fRanForest = (MRanForest*)plisttr->FindObject("MRanForest");
+    if (!fRanForest)
+    {
+        gLog << err << dbginf << "MRanForest not found... aborting." << endl;
+        return kFALSE;
+    }
+
+    fRanTree = (MRanTree*)plisttr->FindObject("MRanTree");
+    if (!fRanTree)                                  
+    {                                                                          
+        gLog << err << dbginf << "MRanTree not found... aborting." << endl;    
+        return kFALSE;
+    }
+
+    }
+
+    //-----------------------------------------------------------------
+    // grow the trees of the random forest (event loop = tree loop)
+
+    if (!RTree)
+    {
+
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << "Macro ONAnalysis : start growing trees" << endl;
+
+    MTaskList tlist2;
+    MParList plist2;
+    plist2.AddToList(&tlist2);
+
+    plist2.AddToList(&matrixg);
+    plist2.AddToList(&matrixh);
+
+    MRanForestGrow rfgrow2;
+    rfgrow2.SetNumTrees(NumTrees);
+    rfgrow2.SetNumTry(NumTry);
+    rfgrow2.SetNdSize(NdSize);
+
+    MWriteRootFile rfwrite2(outRF);
+    rfwrite2.AddContainer("MRanTree", "TREE");
+
+    MFillH fillh2("MHRanForestGini");
+
+    // list of tasks for the loop over the trees
+    
+    tlist2.AddToList(&rfgrow2);
+    tlist2.AddToList(&rfwrite2);
+    tlist2.AddToList(&fillh2);
+
+    //-------------------
+    // Execute tree loop
+    //
+    MEvtLoop treeloop;
+    treeloop.SetName("GrowRFTrees");
+    treeloop.SetParList(&plist2);
+
+    if ( !treeloop.Eventloop() )
+        return;
+
+    tlist2.PrintStatistics(0, kTRUE);
+
+    plist2.FindObject("MHRanForestGini")->DrawClone();
+
+
+    // get adresses of objects which are used in the next eventloop
+    fRanForest = (MRanForest*)plist2->FindObject("MRanForest");
+    if (!fRanForest)
+    {
+        gLog << err << dbginf << "MRanForest not found... aborting." << endl;
+        return kFALSE;
+    }
+
+    fRanTree = (MRanTree*)plist2->FindObject("MRanTree");
+    if (!fRanTree)                                  
+    {                                                                          
+        gLog << err << dbginf << "MRanTree not found... aborting." << endl;    
+        return kFALSE;
+    }
+
+    }
+    // end of growing the trees of the random forest
+    //-----------------------------------------------------------------
+
+
+    //-----------------------------------------------------------------
+    // Update the root files with the RF hadronness
+    //
+
+ if (WRF)
+  {
+    //TString fileName(inNameHadronsTrain);
+    //TString outName(outNameHadronsTrain);
+
+    //TString fileName(inNameHadronsTest);
+    //TString outName(outNameHadronsTest);
+
+    //TString fileName(inNameGammasTrain);
+    //TString outName(outNameGammasTrain);
+
+    //TString fileName(inNameGammasTest);
+    //TString outName(outNameGammasTest);
+
+    TString fileName(inNameData);
+    TString outName(outNameData);
+
+
+
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << "Update root file '" <<  fileName 
+         << "' with the RF hadronness; ==> " << outName << endl;
+
+   
+    MTaskList tliston;
+    MParList pliston;
+
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    MReadMarsFile read("Events", fileName);
+    read.DisableAutoScheme();
+
+
+    //.......................................................................
+    // calculate hadronnes for method of RANDOM FOREST
+
+
+    MRanForestCalc rfcalc;
+    rfcalc.SetHadronnessName(hadRFName);
+
+
+    //.......................................................................
+
+      //MWriteRootFile write(outName, "UPDATE");
+      MWriteRootFile write(outName, "RECREATE");
+
+      write.AddContainer("MRawRunHeader", "RunHeaders");
+      write.AddContainer("MTime",         "Events");
+      write.AddContainer("MMcEvt",        "Events");
+      write.AddContainer("ThetaOrig",     "Events");
+      write.AddContainer("MSrcPosCam",    "Events");
+      write.AddContainer("MSigmabar",     "Events");
+      write.AddContainer("MHillas",       "Events");
+      write.AddContainer("MHillasExt",    "Events");
+      write.AddContainer("MHillasSrc",    "Events");
+      write.AddContainer("MNewImagePar",  "Events");
+
+      write.AddContainer(hadRFName,       "Events");
+
+    //-----------------------------------------------------------------
+
+
+    MFSelFinal selfinalgh(fHilNameSrc);
+    selfinalgh.SetCuts(maxhadronness, 100.0, maxdist);
+    selfinalgh.SetHadronnessName(hadRFName);
+    selfinalgh.SetName("SelFinalgh");
+    MContinue contfinalgh(&selfinalgh);
+    contfinalgh.SetName("ContSelFinalgh");
+
+    MFillH fillranfor("MHRanForest");
+    fillranfor.SetName("HRanForest");
+
+    MFillH fillhadrf("hadRF[MHHadronness]", hadRFName);
+    fillhadrf.SetName("HhadRF");
+
+    MFSelFinal selfinal(fHilNameSrc);
+    selfinal.SetCuts(maxhadronness, maxalpha, maxdist);
+    selfinal.SetHadronnessName(hadRFName);
+    selfinal.SetName("SelFinal");
+    MContinue contfinal(&selfinal);
+    contfinal.SetName("ContSelFinal");
+
+    TString mh3name = "abs(Alpha)";
+    MBinning binsalphaabs("Binning"+mh3name);
+    binsalphaabs.SetEdges(50, -2.0, 98.0);
+
+    MH3 alphaabs("abs(MHillasSrc.fAlpha)");
+    alphaabs.SetName(mh3name);
+    MFillH alpha(&alphaabs);
+    alpha.SetName("FillAlphaAbs");
+
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",    fHilNameSrc);
+    hfill3.SetName("HHillasExt");
+    
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");    
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");
+
+    //*****************************
+    // entries in MParList
+
+    pliston.AddToList(&tliston);
+    InitBinnings(&pliston);
+
+    pliston.AddToList(fRanForest);
+    pliston.AddToList(fRanTree);
+
+    pliston.AddToList(&binsalphaabs);
+    pliston.AddToList(&alphaabs);
+
+
+    //*****************************
+    // entries in MTaskList
+    
+    tliston.AddToList(&read);
+
+    tliston.AddToList(&rfcalc);
+    tliston.AddToList(&fillranfor);
+    tliston.AddToList(&fillhadrf);
+
+    tliston.AddToList(&write);
+    tliston.AddToList(&contfinalgh);
+
+    tliston.AddToList(&alpha);
+    tliston.AddToList(&hfill1);
+    tliston.AddToList(&hfill2);
+    tliston.AddToList(&hfill3);
+    tliston.AddToList(&hfill4);
+    tliston.AddToList(&hfill5);
+
+    tliston.AddToList(&contfinal);
+
+    //*****************************
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetName("UpdateRootFile");
+    evtloop.SetParList(&pliston);
+    evtloop.SetProgressBar(&bar);
+
+    Int_t maxevents = -1;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tliston.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+    //
+    pliston.FindObject("MHRanForest")->DrawClone();
+    pliston.FindObject("hadRF", "MHHadronness")->DrawClone();
+    pliston.FindObject("hadRF", "MHHadronness")->Print();
+
+    pliston.FindObject("MHHillas")->DrawClone();
+    pliston.FindObject("MHHillasExt")->DrawClone();
+    pliston.FindObject("MHHillasSrc")->DrawClone();
+    pliston.FindObject("MHNewImagePar")->DrawClone();
+    pliston.FindObject("MHStarMap")->DrawClone();
+
+
+     //-------------------------------------------
+    // fit alpha distribution to get the number of excess events and
+    // calculate significance of gamma signal in the alpha plot
+  
+    MH3* absalpha = (MH3*)(pliston.FindObject(mh3name, "MH3"));
+    TH1  &alphaHist = absalpha->GetHist();
+    alphaHist.SetXTitle("|alpha|  [\\circ]");
+    alphaHist.SetName("alpha-macro");
+
+    Double_t alphasig = 13.1;
+    Double_t alphamin = 30.0;
+    Double_t alphamax = 90.0;
+    Int_t    degree   =    2;
+    Double_t significance = -99.0;
+    Bool_t   drawpoly  = kTRUE;
+    Bool_t   fitgauss  = kTRUE;
+    Bool_t   print     = kTRUE;
+
+    MHFindSignificance findsig;
+    findsig.SetRebin(kTRUE);
+    findsig.SetReduceDegree(kFALSE);
+
+    findsig.FindSigma(&alphaHist, alphamin, alphamax, degree, 
+                        alphasig, drawpoly, fitgauss, print);
+    significance = findsig.GetSignificance();
+    Float_t alphasi = findsig.GetAlphasi();
+
+    gLog << "For file '" << fileName << "' : " << endl;
+    gLog << "Significance of gamma signal after supercuts : "
+         << significance << " (for |alpha| < " << alphasi << " degrees)" 
+         << endl;
+
+    findsig.SigmaVsAlpha(&alphaHist, alphamin, alphamax, degree, print);
+
+    //-------------------------------------------
+
+
+    DeleteBinnings(&pliston);
+  }
+
+    gLog << "Macro ONAnalysis : End of Job B_RF_UP" << endl;
+    gLog << "=======================================================" << endl;
+ }
+  //---------------------------------------------------------------------
+
+
+  //---------------------------------------------------------------------
+  // Job B_SC_UP
+  //============
+
+    //  - create (or read in) optimum supercuts parameter values
+    //
+    //  - calculate the hadroness for the supercuts
+    //
+    //  - update input root file, including the hadroness
+
+
+ if (JobB_SC_UP)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job B_SC_UP" << endl;
+
+    gLog << "" << endl;
+    gLog << "Macro ONAnalysis : JobB_SC_UP, CMatrix, RMatrix, WOptimize, RTest, WSC = "
+         << (JobB_SC_UP ? "kTRUE" : "kFALSE")  << ",  " 
+         << (CMatrix    ? "kTRUE" : "kFALSE")  << ",  "
+         << (RMatrix    ? "kTRUE" : "kFALSE")  << ",  "
+         << (WOptimize  ? "kTRUE" : "kFALSE")  << ",  "
+         << (RTest      ? "kTRUE" : "kFALSE")  << ",  "
+         << (WSC        ? "kTRUE" : "kFALSE")  << endl;
+
+
+    //--------------------------------------------
+    // file which contains the initial parameter values for the supercuts 
+    // if parSCinit ="" the initial values are taken from the constructor of
+    //                  MSupercuts
+
+    TString parSCinit = outPath;
+    //parSCinit += "parSC_1709d";
+    parSCinit = "";
+
+    gLog << "parSCinit = " << parSCinit << endl;
+
+    //---------------
+    // file onto which the optimal parameter values for the supercuts 
+    // are written
+
+    TString parSCfile = outPath;
+    parSCfile += "parSC_2310a";
+
+    gLog << "parSCfile = " << parSCfile << endl;
+
+    //--------------------------------------------
+    // file to be updated (either ON or MC)
+
+    //TString typeInput = "ON";
+    //TString typeInput = "OFF";
+    TString typeInput = "MC";
+    gLog << "typeInput = " << typeInput << endl;
+
+    // name of input root file
+    TString filenameData = outPath;
+    filenameData += typeInput;
+    filenameData += "2.root";
+    gLog << "filenameData = " << filenameData << endl; 
+
+    // name of output root file
+    TString outNameImage = outPath;
+    outNameImage += typeInput;
+    outNameImage += "3.root";
+    
+
+    //TString outNameImage = filenameData;
+
+    gLog << "outNameImage = " << outNameImage << endl; 
+
+    //--------------------------------------------
+    // files to be read for optimizing the supercuts
+    // 
+    // for the training
+    TString filenameTrain = outPath;
+    filenameTrain += "ON";
+    filenameTrain += "1.root";
+    Int_t howManyTrain = 800000;
+    gLog << "filenameTrain = " << filenameTrain << ",   howManyTrain = "
+         << howManyTrain  << endl; 
+
+    // for testing
+    TString filenameTest = outPath;
+    filenameTest += "ON";
+    filenameTest += "1.root";
+    Int_t howManyTest = 800000;
+
+    gLog << "filenameTest = " << filenameTest << ",   howManyTest = "
+         << howManyTest  << endl; 
+    
+
+    //--------------------------------------------
+    // files to contain the matrices (generated from filenameTrain and
+    //                                               filenameTest)
+    // 
+    // for the training
+    TString fileMatrixTrain = outPath;
+    fileMatrixTrain += "MatrixTrainSC";
+    fileMatrixTrain += ".root";
+    gLog << "fileMatrixTrain = " << fileMatrixTrain << endl; 
+
+    // for testing
+    TString fileMatrixTest = outPath;
+    fileMatrixTest += "MatrixTestSC";
+    fileMatrixTest += ".root";
+    gLog << "fileMatrixTest = " << fileMatrixTest << endl; 
+
+    
+
+    //---------------------------------------------------------------------
+    // Training and test matrices :
+    // - either create them and write them onto a file
+    // - or read them from a file
+
+
+    MFindSupercuts findsuper;
+    findsuper.SetFilenameParam(parSCfile);
+    findsuper.SetHadronnessName("HadSC");
+    findsuper.SetUseOrigDistribution(kTRUE);
+
+    //--------------------------
+    // create matrices and write them onto files 
+    if (CMatrix)
+    {
+      TString mname("costheta");
+      MBinning bin("Binning"+mname);
+      bin.SetEdges(10, 0., 1.0);
+
+      MH3 mh3("cos(MMcEvt.fTelescopeTheta)");
+      mh3.SetName(mname);
+      MH::SetBinning(&mh3.GetHist(), &bin);
+      for (Int_t i=1; i<=mh3.GetNbins(); i++)
+        mh3.GetHist().SetBinContent(i, 1.0);
+
+
+      if (filenameTrain == filenameTest)
+      {
+        if ( !findsuper.DefineTrainTestMatrix(
+                              filenameTrain,   mh3, 
+                              howManyTrain,    howManyTest,  
+                              fileMatrixTrain, fileMatrixTest)     )
+        {
+          *fLog << "Macro ONAnalysis.C : DefineTrainTestMatrix failed" << endl;
+          return;
+        }
+
+      }
+      else
+      {
+        if ( !findsuper.DefineTrainMatrix(filenameTrain, mh3,
+                                          howManyTrain,  fileMatrixTrain) )
+        {
+          *fLog << "Macro ONAnalysis.C : DefineTrainMatrix failed" << endl;
+          return;
+        }
+
+	if ( !findsuper.DefineTestMatrix( filenameTest, mh3, 
+                                          howManyTest,  fileMatrixTest)  )
+        {
+          *fLog << "Macro ONAnalysis.C : DefineTestMatrix failed" << endl;
+          return;
+        }
+      }
+     }
+
+    //--------------------------
+    // read matrices from files
+    //                              
+
+    if (RMatrix)
+      findsuper.ReadMatrix(fileMatrixTrain, fileMatrixTest);
+    //--------------------------
+
+
+
+    //---------------------------------------------------------------------
+    // optimize supercuts using the training sample
+    // 
+    // the initial values are taken 
+    //     - from the file parSCinit (if != "")
+    //     - or from the arrays params and steps (if their sizes are != 0)
+    //     - or from the MSupercuts constructor
+
+
+if (WOptimize)
+  {
+    gLog << "Macro ONAnalysis.C : optimize the supercuts using the training matrix" 
+         << endl;
+
+    TArrayD params(0);
+    TArrayD steps(0);
+  
+    if (parSCinit == "")
+    {
+      Double_t vparams[104] = {
+      // LengthUp
+	0.315585,  0.001455, 0.203198, 0.005532, -0.001670, -0.020362,
+	0.007388, -0.013463,
+      // LengthLo
+        0.151530,  0.028323, 0.510707, 0.053089,  0.013708,  2.357993,
+	0.000080, -0.007157,
+      // WidthUp
+        0.145412, -0.001771, 0.054462, 0.022280, -0.009893,  0.056353,
+        0.020711, -0.016703,
+      // WidthLo
+        0.089187, -0.006430, 0.074442, 0.003738, -0.004256, -0.014101,
+        0.006126, -0.002849,
+      // DistUp
+        1.787943,  0.0,      2.942310, 0.199815,  0.0,       0.249909,
+        0.189697,  0.0,
+      // DistLo
+        0.589406,  0.0,     -0.083964,-0.007975,  0.0,       0.045374,
+       -0.001750,  0.0,
+      // AsymUp
+        1.e10,     0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // AsymLo
+       -1.e10,     0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // ConcUp
+        1.e10,     0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // ConcLo
+       -1.e10,     0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // Leakage1Up
+        1.e10,     0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // Leakage1Lo
+       -1.e10,     0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // AlphaUp
+	13.12344,  0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0                                                 };
+
+      Double_t vsteps[104] = {
+      // LengthUp
+        0.03,      0.0002,   0.02,     0.0006,    0.0002,    0.002,
+        0.0008,    0.002,
+      // LengthLo
+        0.02,      0.003,    0.05,     0.006,     0.002,     0.3,
+        0.0001,    0.0008,
+      // WidthUp
+        0.02,      0.0002,   0.006,    0.003,     0.002,     0.006,
+        0.002,     0.002,
+      // WidthLo
+        0.009,     0.0007,   0.008,    0.0004,    0.0005,    0.002,
+        0.0007,    0.003,
+      // DistUp
+        0.2,       0.0,      0.3,      0.02,      0.0,       0.03,
+        0.02,      0.0
+      // DistLo
+        0.06,      0.0,      0.009,    0.0008,    0.0,       0.005,
+        0.0002,    0.0
+      // AsymUp  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // AsymLo  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // ConcUp  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // ConcLo  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // Leakage1Up  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // Leakage1Lo  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0,
+      // AlphaUp  
+        0.0,       0.0,      0.0,      0.0,       0.0,       0.0,
+        0.0,       0.0                                                 };
+
+      params.Set(104, vparams);
+      steps.Set (104, vsteps );
+    }
+
+    Bool_t rf;
+    rf = findsuper.FindParams(parSCinit, params, steps);
+
+    if (!rf) 
+    {
+       gLog << "Macro ONAnalysis.C : optimization of supercuts failed" << endl;
+       return;
+    }
+  }
+
+    //--------------------------------------
+    // test the supercuts on the test sample
+    //    
+
+ if (RTest)
+ {
+    gLog << "Macro ONAnalysis.C : test the supercuts on the test matrix" << endl;
+    Bool_t rt = findsuper.TestParams();
+    if (!rt) 
+    {
+       gLog << "Macro ONAnalysis.C : test of supercuts on the test matrix failed" 
+            << endl;
+    }
+
+ }
+
+
+    //-----------------------------------------------------------------
+    // Update the input files with the SC hadronness
+    //
+
+ if (WSC)
+ {
+    gLog << "" << endl;
+    gLog << "========================================================" << endl;
+    gLog << "Update input file '" <<  filenameData 
+         << "' with the SC hadronness" << endl;
+
+
+    //----------------------------------------------------
+    // read in optimum parameter values for the supercuts
+
+    TFile inparam(parSCfile);
+    MSupercuts scin;
+    scin.Read("MSupercuts");
+    inparam.Close();
+
+    gLog << "Parameter values for supercuts were read in from file '"
+         << parSCfile << "'" << endl;
+
+    TArrayD supercutsPar;
+    supercutsPar =  scin.GetParameters();
+
+    TArrayD supercutsStep;
+    supercutsStep =  scin.GetStepsizes();
+
+    gLog << "Parameter values for supercuts : " << endl;
+    for (Int_t i=0; i<supercutsPar.GetSize(); i++)
+    {
+      gLog << supercutsPar[i] << ",  ";
+    }
+    gLog << endl;
+
+    gLog << "Step values for supercuts : " << endl;
+    for (Int_t i=0; i<supercutsStep.GetSize(); i++)
+    {
+      gLog << supercutsStep[i] << ",  ";
+    }
+    gLog << endl;
+
+
+    //----------------------------------------------------
+    MTaskList tliston;
+    MParList pliston;
+
+    // set the parameters of the supercuts
+    MSupercuts supercuts;
+    supercuts.SetParameters(supercutsPar);
+    gLog << "parameter values for the supercuts used for updating the input file ' " 
+         << filenameData << "'" << endl;
+    supercutsPar = supercuts.GetParameters();
+    for (Int_t i=0; i<supercutsPar.GetSize(); i++)
+    {
+      gLog << supercutsPar[i] << ",  ";
+    }
+    gLog << endl;
+
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    MReadMarsFile read("Events", filenameData);
+    read.DisableAutoScheme();
+
+    TString fHilName    = "MHillas"; 
+    TString fHilNameExt = "MHillasExt"; 
+    TString fHilNameSrc = "MHillasSrc"; 
+    TString fImgParName = "MNewImagePar"; 
+
+
+    //.......................................................................
+    // calculation of hadroness for the supercuts
+    // (=0.25 if fullfilled, =0.75 otherwise)
+
+    TString hadSCName = "HadSC";
+    MSupercutsCalc sccalc(fHilName, fHilNameSrc);
+    sccalc.SetHadronnessName(hadSCName);
+
+
+    //.......................................................................
+
+
+      //MWriteRootFile write(outNameImage, "UPDATE");
+      //MWriteRootFile write = new MWriteRootFile(outNameImage, "RECREATE");
+
+    
+      MWriteRootFile write(outNameImage, "RECREATE");
+
+      write.AddContainer("MRawRunHeader", "RunHeaders");
+      write.AddContainer("MTime",         "Events");
+      write.AddContainer("MMcEvt",        "Events");
+      write.AddContainer("ThetaOrig",     "Events");
+      write.AddContainer("MSrcPosCam",    "Events");
+      write.AddContainer("MSigmabar",     "Events");
+      write.AddContainer("MHillas",       "Events");
+      write.AddContainer("MHillasExt",    "Events");
+      write.AddContainer("MHillasSrc",    "Events");
+      write.AddContainer("MNewImagePar",  "Events");
+
+      write.AddContainer("HadRF",         "Events");
+      write.AddContainer(hadSCName,       "Events");
+    
+
+    //-----------------------------------------------------------------
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    Float_t maxhadronness =  0.40;
+    Float_t maxalpha      =  20.0;
+    Float_t maxdist       =  10.0;
+
+    MFSelFinal selfinalgh(fHilNameSrc);
+    selfinalgh.SetCuts(maxhadronness, 100.0, maxdist);
+    selfinalgh.SetHadronnessName(hadSCName);
+    selfinalgh.SetName("SelFinalgh");
+    MContinue contfinalgh(&selfinalgh);
+    contfinalgh.SetName("ContSelFinalgh");
+
+    MFillH fillhadsc("hadSC[MHHadronness]", hadSCName);
+    fillhadsc.SetName("HhadSC");
+
+    MFSelFinal selfinal(fHilNameSrc);
+    selfinal.SetCuts(maxhadronness, maxalpha, maxdist);
+    selfinal.SetHadronnessName(hadSCName);
+    selfinal.SetName("SelFinal");
+    MContinue contfinal(&selfinal);
+    contfinal.SetName("ContSelFinal");
+
+    TString mh3name = "abs(Alpha)";
+    MBinning binsalphaabs("Binning"+mh3name);
+    binsalphaabs.SetEdges(50, -2.0, 98.0);
+
+    MH3 alphaabs("abs(MHillasSrc.fAlpha)");
+    alphaabs.SetName(mh3name);
+
+    TH1  &alphahist = alphaabs->GetHist();
+
+    MFillH alpha(&alphaabs);
+    alpha.SetName("FillAlphaAbs");
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",    fHilNameSrc);
+    hfill3.SetName("HHillasExt");
+    
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");    
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");
+
+    //*****************************
+    // entries in MParList
+
+    pliston.AddToList(&tliston);
+    InitBinnings(&pliston);
+
+    pliston.AddToList(&supercuts);
+
+    pliston.AddToList(&binsalphaabs);
+    pliston.AddToList(&alphaabs);
+
+    //*****************************
+    // entries in MTaskList
+    
+    tliston.AddToList(&read);
+
+    tliston.AddToList(&sccalc);
+    tliston.AddToList(&fillhadsc);
+
+    tliston.AddToList(&write);
+    tliston.AddToList(&contfinalgh);
+
+    tliston.AddToList(&alpha);
+    tliston.AddToList(&hfill1);
+    tliston.AddToList(&hfill2);
+    tliston.AddToList(&hfill3);
+    tliston.AddToList(&hfill4);
+    tliston.AddToList(&hfill5);
+
+    tliston.AddToList(&contfinal);
+
+    //*****************************
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetParList(&pliston);
+    evtloop.SetProgressBar(&bar);
+
+    Int_t maxevents = -1;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tliston.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+    //
+    pliston.FindObject("hadSC", "MHHadronness")->DrawClone();
+
+    pliston.FindObject("MHHillas")->DrawClone();
+    pliston.FindObject("MHHillasExt")->DrawClone();
+    pliston.FindObject("MHHillasSrc")->DrawClone();
+    pliston.FindObject("MHNewImagePar")->DrawClone();
+    pliston.FindObject("MHStarMap")->DrawClone();
+
+     //-------------------------------------------
+    // fit alpha distribution to get the number of excess events and
+    // calculate significance of gamma signal in the alpha plot
+  
+    MH3* absalpha = (MH3*)(pliston.FindObject(mh3name, "MH3"));
+    TH1  &alphaHist = absalpha->GetHist();
+    alphaHist.SetXTitle("|alpha|  [\\circ]");
+    alphaHist.SetName("alpha-macro");
+
+    Double_t alphasig = 13.1;
+    Double_t alphamin = 30.0;
+    Double_t alphamax = 90.0;
+    Int_t    degree   =    2;
+    Double_t significance = -99.0;
+    Bool_t   drawpoly  = kTRUE;
+    Bool_t   fitgauss  = kTRUE;
+    Bool_t   print     = kTRUE;
+
+    MHFindSignificance findsig;
+    findsig.SetRebin(kTRUE);
+    findsig.SetReduceDegree(kFALSE);
+
+    findsig.FindSigma(&alphaHist, alphamin, alphamax, degree, 
+                        alphasig, drawpoly, fitgauss, print);
+    significance = findsig.GetSignificance();
+    Float_t alphasi = findsig.GetAlphasi();
+
+    gLog << "For file '" << filenameData << "' : " << endl;
+    gLog << "Significance of gamma signal after supercuts : "
+         << significance << " (for |alpha| < " << alphasi << " degrees)" 
+         << endl;
+
+    findsig.SigmaVsAlpha(&alphaHist, alphamin, alphamax, degree, print);
+
+    //-------------------------------------------
+
+    DeleteBinnings(&pliston);
+ }
+
+
+    gLog << "Macro ONAnalysis : End of Job B_SC_UP" << endl;
+    gLog << "=======================================================" << endl;
+ }
+  //---------------------------------------------------------------------
+
+
+
+  //---------------------------------------------------------------------
+  // Job C  
+  //======
+
+    //  - read ON1 and MC1 data files  
+    //    which should have been updated to contain the hadronnesses
+    //    for the method of Random Forest and for the SUPERCUTS
+    //  - produce Neyman-Pearson plots
+ 
+ if (JobC)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job C" << endl;
+
+    gLog << "" << endl;
+    gLog << "Macro ONAnalysis : JobC = " 
+         << (JobC       ? "kTRUE" : "kFALSE")  << endl;
+
+
+    // name of input data file
+    TString filenameData = outPath;
+    filenameData += "ON";
+    filenameData += "3.root";
+    gLog << "filenameData = " << filenameData << endl;
+
+    // name of input MC file
+    TString filenameMC = outPath;
+    filenameMC += "MC";
+    filenameMC += "3.root";
+    gLog << "filenameMC   = " << filenameMC   << endl;
+
+
+    //-----------------------------------------------------------------
+
+    MTaskList tliston;
+    MParList pliston;
+
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    MReadMarsFile read("Events", filenameMC);
+    read.AddFile(filenameData);
+    read.DisableAutoScheme();
+
+
+    //.......................................................................
+    // names of hadronness containers
+
+    //TString hadNNName = "HadNN";
+    TString hadSCName = "HadSC";
+    TString hadRFName = "HadRF";
+
+    //.......................................................................
+
+
+    TString fHilName    = "MHillas"; 
+    TString fHilNameExt = "MHillasExt"; 
+    TString fHilNameSrc = "MHillasSrc"; 
+    TString fImgParName = "MNewImagePar"; 
+
+    Float_t maxhadronness =  0.40;
+    Float_t maxalpha      =  20.0;
+    Float_t maxdist       =  10.0;
+
+    MFSelFinal selfinalgh(fHilNameSrc);
+    selfinalgh.SetCuts(maxhadronness, 100.0, maxdist);
+    selfinalgh.SetHadronnessName(hadSCName);
+    selfinalgh.SetName("SelFinalgh");
+    MContinue contfinalgh(&selfinalgh);
+    contfinalgh.SetName("ContSelFinalgh");
+
+    //MFillH fillhadnn("hadNN[MHHadronness]", hadNNName);
+    //fillhadnn.SetName("HhadNN");
+    MFillH fillhadsc("hadSC[MHHadronness]", hadSCName);
+    fillhadsc.SetName("HhadSC");
+    MFillH fillhadrf("hadRF[MHHadronness]", hadRFName);
+    fillhadrf.SetName("HhadRF");
+
+    MFSelFinal selfinal(fHilNameSrc);
+    selfinal.SetCuts(maxhadronness, maxalpha, maxdist);
+    selfinal.SetHadronnessName(hadSCName);
+    selfinal.SetName("SelFinal");
+    MContinue contfinal(&selfinal);
+    contfinal.SetName("ContSelFinal");
+
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",    fHilNameSrc);
+    hfill3.SetName("HHillasExt");
+    
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");    
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");
+
+
+    //*****************************
+    // entries in MParList
+
+    pliston.AddToList(&tliston);
+    InitBinnings(&pliston);
+
+
+    //*****************************
+    // entries in MTaskList
+    
+    tliston.AddToList(&read);
+
+    //tliston.AddToList(&fillhadnn);
+    tliston.AddToList(&fillhadsc);
+    tliston.AddToList(&fillhadrf);
+   
+    tliston.AddToList(&contfinalgh);
+    tliston.AddToList(&hfill1);
+    tliston.AddToList(&hfill2);
+    tliston.AddToList(&hfill3);
+    tliston.AddToList(&hfill4);
+    tliston.AddToList(&hfill5);
+
+    tliston.AddToList(&contfinal);
+
+    //*****************************
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetParList(&pliston);
+    evtloop.SetProgressBar(&bar);
+
+    Int_t maxevents = -1;
+    //Int_t maxevents = 35000;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tliston.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+    //
+
+    //pliston.FindObject("hadNN", "MHHadronness")->DrawClone();
+    pliston.FindObject("hadSC", "MHHadronness")->DrawClone();
+    pliston.FindObject("hadRF", "MHHadronness")->DrawClone();
+
+    pliston.FindObject("MHHillas")->DrawClone();
+    pliston.FindObject("MHHillasExt")->DrawClone();
+    pliston.FindObject("MHHillasSrc")->DrawClone();
+    pliston.FindObject("MHNewImagePar")->DrawClone();
+    pliston.FindObject("MHStarMap")->DrawClone();
+
+    DeleteBinnings(&pliston);
+
+    gLog << "Macro ONAnalysis : End of Job C" << endl;
+    gLog << "===================================================" << endl;
+ }
+
+
+  //---------------------------------------------------------------------
+  // Job D
+  //======
+
+    //  - select g/h separation method XX
+    //  - read ON2 (or MC2) root file 
+    //  - apply cuts in hadronness
+    //  - make plots
+
+
+ if (JobD)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job D" << endl;
+
+    gLog << "" << endl;
+    gLog << "Macro ONAnalysis : JobD = " 
+         << (JobD        ? "kTRUE" : "kFALSE")  << endl;
+
+
+    // type of data to be analysed
+    TString typeData = "ON";
+    //TString typeData = "OFF";
+    //TString typeData = "MC";
+    gLog << "typeData = " << typeData << endl;
+
+    TString ext      = "3.root";
+
+
+    //------------------------------
+    // selection of g/h separation method
+    // and definition of final selections
+
+    //TString XX("SC");
+    TString XX("RF");
+    TString fhadronnessName("Had");
+    fhadronnessName += XX;
+    gLog << "fhadronnessName = " << fhadronnessName << endl;
+
+    // maximum values of the hadronness, |ALPHA| and DIST
+    Float_t maxhadronness   = 0.233;
+    Float_t maxalpha        = 20.0;
+    Float_t maxdist         = 10.0;
+    gLog << "Maximum values of hadronness, |ALPHA| and DIST = "
+         << maxhadronness << ",  " << maxalpha << ",  " 
+         << maxdist << endl;
+
+
+    //------------------------------
+    // name of data file to be analysed
+    TString filenameData(outPath);
+    filenameData += typeData;
+    filenameData += ext;
+    gLog << "filenameData = " << filenameData << endl;
+
+
+
+    //*************************************************************************
+    //
+    // Analyse the data
+    //
+
+    MTaskList tliston;
+    MParList pliston;
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+
+    TString fHilName    = "MHillas"; 
+    TString fHilNameExt = "MHillasExt"; 
+    TString fHilNameSrc = "MHillasSrc"; 
+    TString fImgParName = "MNewImagePar"; 
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    MReadMarsFile read("Events", filenameData);
+    read.DisableAutoScheme();
+
+
+    //-----------------------------------------------------------------
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    MFSelFinal selfinalgh(fHilNameSrc);
+    selfinalgh.SetCuts(maxhadronness, 100.0, maxdist);
+    selfinalgh.SetHadronnessName(fhadronnessName);
+    selfinalgh.SetName("SelFinalgh");
+    MContinue contfinalgh(&selfinalgh);
+    contfinalgh.SetName("ContSelFinalgh");
+
+    MFillH fillhadsc("hadSC[MHHadronness]", "HadSC");
+    fillhadsc.SetName("HhadSC");
+    MFillH fillhadrf("hadRF[MHHadronness]", "HadRF");
+    fillhadrf.SetName("HhadRF");
+
+    TString mh3name = "abs(Alpha)";
+    MBinning binsalphaabs("Binning"+mh3name);
+    binsalphaabs.SetEdges(50, -2.0, 98.0);
+
+    MH3 alphaabs("abs(MHillasSrc.fAlpha)");
+    alphaabs.SetName(mh3name);
+
+    TH1  &alphahist = alphaabs->GetHist();
+
+    MFillH alpha(&alphaabs);
+    alpha.SetName("FillAlphaAbs");
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",   fHilNameSrc);
+    hfill3.SetName("HHillasExt");    
+
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");    
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");    
+
+    MFSelFinal selfinal(fHilNameSrc);
+    selfinal.SetCuts(maxhadronness, maxalpha, maxdist);
+    selfinal.SetHadronnessName(fhadronnessName);
+    selfinal.SetName("SelFinal");
+    MContinue contfinal(&selfinal);
+    contfinal.SetName("ContSelFinal");
+
+
+    //*****************************
+    // entries in MParList
+
+    pliston.AddToList(&tliston);
+    InitBinnings(&pliston);
+    pliston.AddToList(&binsalphaabs);
+    pliston.AddToList(&alphaabs);
+
+    //*****************************
+    // entries in MTaskList
+    
+    tliston.AddToList(&read);
+
+    tliston.AddToList(&contfinalgh);
+
+    tliston.AddToList(&fillhadsc);
+    tliston.AddToList(&fillhadrf);
+
+    tliston.AddToList(&alpha);
+    tliston.AddToList(&hfill1);
+    tliston.AddToList(&hfill2);
+    tliston.AddToList(&hfill3);
+    tliston.AddToList(&hfill4);
+    tliston.AddToList(&hfill5);
+
+    tliston.AddToList(&contfinal);
+
+    //*****************************
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetParList(&pliston);
+    evtloop.SetProgressBar(&bar);
+
+    Int_t maxevents = -1;
+    //Int_t maxevents = 10000;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tliston.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+    //
+
+    pliston.FindObject("hadRF", "MHHadronness")->DrawClone();
+    pliston.FindObject("hadSC", "MHHadronness")->DrawClone();
+
+    pliston.FindObject("MHHillas")->DrawClone();
+    pliston.FindObject("MHHillasExt")->DrawClone();
+    pliston.FindObject("MHHillasSrc")->DrawClone();
+    pliston.FindObject("MHNewImagePar")->DrawClone();
+    pliston.FindObject("MHStarMap")->DrawClone();
+
+
+    //-------------------------------------------
+
+    // fit alpha distribution to get the number of excess events and
+    // calculate significance of gamma signal in the alpha plot
+  
+    MH3* absalpha = (MH3*)(pliston.FindObject(mh3name, "MH3"));
+    TH1  &alphaHist = absalpha->GetHist();
+    alphaHist.SetXTitle("|alpha|  [\\circ]");
+    alphaHist.SetName("alpha-JobD");
+
+    Double_t alphasig = 13.1;
+    Double_t alphamin = 30.0;
+    Double_t alphamax = 90.0;
+    Int_t    degree   =    2;
+    Double_t significance = -99.0;
+    Bool_t   drawpoly  = kTRUE;
+    Bool_t   fitgauss  = kTRUE;
+    Bool_t   print     = kTRUE;
+
+    MHFindSignificance findsig;
+    findsig.SetRebin(kTRUE);
+    findsig.SetReduceDegree(kFALSE);
+
+    findsig.FindSigma(&alphaHist, alphamin, alphamax, degree, 
+                        alphasig, drawpoly, fitgauss, print);
+    significance = findsig.GetSignificance();
+    Float_t alphasi = findsig.GetAlphasi();
+
+    gLog << "For file '" << filenameData << "' : " << endl;
+    gLog << "Significance of gamma signal after supercuts : "
+         << significance << " (for |alpha| < " << alphasi << " degrees)" 
+         << endl;
+
+    findsig.SigmaVsAlpha(&alphaHist, alphamin, alphamax, degree, print);
+
+    //-------------------------------------------
+
+
+    DeleteBinnings(&pliston);
+
+    gLog << "Macro ONAnalysis : End of Job D" << endl;
+    gLog << "=======================================================" << endl;
+ }
+  //---------------------------------------------------------------------
+
+
+
+
+  //---------------------------------------------------------------------
+  // Job E_XX
+  //=========
+
+    //  - select g/h separation method XX
+    //  - read MC_XX2.root file 
+    //  - calculate eff. collection area
+    //  - read ON_XX2.root file 
+    //  - apply final cuts
+    //  - calculate flux
+    //  - write root file for ON data after final cuts (ON_XX3.root))
+
+
+ if (JobE_XX)
+ {
+    gLog << "=====================================================" << endl;
+    gLog << "Macro ONAnalysis : Start of Job E_XX" << endl;
+
+    gLog << "" << endl;
+    gLog << "Macro 
+Analysis : JobE_XX, CCollArea, OEEst, WEX = " 
+         << (JobE_XX ? "kTRUE" : "kFALSE")  << ",  " 
+         << (CCollArea?"kTRUE" : "kFALSE")  << ",  " 
+         << (OEEst ?   "kTRUE" : "kFALSE")  << ",  " 
+         << (WEX     ? "kTRUE" : "kFALSE")  << endl;
+
+
+    // type of data to be analysed
+    //TString typeData = "ON";
+    //TString typeData = "OFF";
+    TString typeData = "MC";
+    gLog << "typeData = " << typeData << endl;
+
+    TString typeMC   = "MC";
+    TString ext      = "3.root";
+    TString extout   = "4.root";
+
+    //------------------------------
+    // selection of g/h separation method
+    // and definition of final selections
+
+    //TString XX("SC");
+    TString XX("RF");
+    TString fhadronnessName("Had");
+    fhadronnessName += XX;
+    gLog << "fhadronnessName = " << fhadronnessName << endl;
+
+    // maximum values of the hadronness, |ALPHA| and DIST
+    Float_t maxhadronness   = 0.23;
+    Float_t maxalpha        = 20.0;
+    Float_t maxdist         = 10.0;
+    gLog << "Maximum values of hadronness, |ALPHA| and DIST = "
+         << maxhadronness << ",  " << maxalpha << ",  " 
+         << maxdist << endl;
+
+    //------------------------------
+    // name of MC file to be used for optimizing the energy estimator
+    TString filenameOpt(outPath);
+    filenameOpt += typeMC;
+    filenameOpt += ext; 
+    gLog << "filenameOpt = " << filenameOpt << endl;
+
+    //------------------------------
+    // name of file containing the parameters of the energy estimator
+    TString energyParName(outPath);
+    energyParName += "energyest_";
+    energyParName += XX;
+    energyParName += ".root";
+    gLog << "energyParName = " << energyParName << endl;
+
+    //------------------------------
+    // name of MC file to be used for calculating the eff. collection areas
+    TString filenameArea(outPath);
+    filenameArea += typeMC;
+    filenameArea += ext; 
+    gLog << "filenameArea = " << filenameArea << endl;
+
+    //------------------------------
+    // name of file containing the eff. collection areas
+    TString collareaName(outPath);
+    collareaName += "area_";
+    collareaName += XX;
+    collareaName += ".root";
+    gLog << "collareaName = " << collareaName << endl;
+
+    //------------------------------
+    // name of data file to be analysed
+    TString filenameData(outPath);
+    filenameData += typeData;
+    filenameData += ext;
+    gLog << "filenameData = " << filenameData << endl;
+
+    //------------------------------
+    // name of output data file (after the final cuts)
+    TString filenameDataout(outPath);
+    filenameDataout += typeData;
+    filenameDataout += "_";
+    filenameDataout += XX;
+    filenameDataout += extout;
+    gLog << "filenameDataout = " << filenameDataout << endl;
+
+    //------------------------------
+    // name of file containing histograms for flux calculastion
+    TString filenameResults(outPath);
+    filenameResults += typeData;
+    filenameResults += "Results_";
+    filenameResults += XX;
+    filenameResults += extout;
+    gLog << "filenameResults = " << filenameResults << endl;
+
+
+    //====================================================================
+
+    MHMcCT1CollectionArea collarea;
+    collarea.SetEaxis(MHMcCT1CollectionArea::kLinear);
+
+    MParList  parlist;
+    InitBinnings(&parlist);
+
+  if (CCollArea)
+  {
+    gLog << "-----------------------------------------------" << endl;
+    gLog << "Start calculation of effective collection areas" << endl;
+
+
+    MTaskList tasklist;
+
+    //---------------------------------------
+    // Setup the tasks to be executed
+    //
+    MReadMarsFile reader("Events", filenameArea);
+    reader.DisableAutoScheme();
+
+    MFSelFinal cuthadrons;
+    cuthadrons.SetHadronnessName(fhadronnessName);
+    cuthadrons.SetCuts(maxhadronness, maxalpha, maxdist);
+
+    MContinue conthadrons(&cuthadrons);
+
+
+    MFillH filler("MHMcCT1CollectionArea", "MMcEvt");
+    filler.SetName("CollectionArea");
+
+    //********************************
+    // entries in MParList
+
+    parlist.AddToList(&tasklist);
+
+    parlist.AddToList(&collarea);
+
+    //********************************
+    // entries in MTaskList
+
+    tasklist.AddToList(&reader);   
+    tasklist.AddToList(&conthadrons);
+    tasklist.AddToList(&filler);
+
+    //********************************
+
+    //-----------------------------------------
+    // Execute event loop
+    //
+    MEvtLoop magic;
+    magic.SetParList(&parlist);
+
+    MProgressBar bar;
+    magic.SetProgressBar(&bar);
+    if (!magic.Eventloop())
+        return;
+
+    tasklist.PrintStatistics(0, kTRUE);
+
+    // Calculate effective collection areas 
+    // and display the histograms
+    //
+    //MHMcCT1CollectionArea *collarea = 
+    //     (MHMcCT1CollectionArea*)parlist.FindObject("MHMcCT1CollectionArea");
+    collarea.CalcEfficiency();
+    collarea.DrawClone();
+
+
+
+    //---------------------------------------------
+    // Write histograms to a file 
+    //
+
+    TFile f(collareaName, "RECREATE");
+    //collarea.GetHist()->Write();
+    //collarea.GetHAll()->Write();
+    //collarea.GetHSel()->Write();
+    collarea.Write();
+
+    f.Close();
+
+    gLog << "Collection area plots written onto file " << collareaName << endl;
+
+    gLog << "Calculation of effective collection areas done" << endl;
+    gLog << "-----------------------------------------------" << endl;    
+    //------------------------------------------------------------------
+  }
+
+  if (!CCollArea)
+  {
+    gLog << "-----------------------------------------------" << endl;
+    gLog << "Read in effective collection areas from file " 
+         << collareaName << endl;
+
+    TFile collfile(collareaName);
+    collfile.ls();
+    collarea.Read("MHMcCT1CollectionArea");
+    collarea.DrawClone();
+
+    gLog << "Effective collection areas were read in from file " 
+         << collareaName << endl;
+    gLog << "-----------------------------------------------" << endl;    
+  }
+
+
+    // save binnings for call to CT1EEst
+    MBinning *binsE     = (MBinning*)parlist.FindObject("BinningE");
+    if (!binsE)
+	{
+          gLog << "Object 'BinningE' not found in MParList" << endl;
+          return;
+	}
+    MBinning *binsTheta = (MBinning*)parlist.FindObject("BinningTheta");
+    if (!binsTheta)
+	{
+          gLog << "Object 'BinningTheta' not found in MParList" << endl;
+          return;
+	}
+
+    //-------------------------------------
+    TString fHilName    = "MHillas"; 
+    TString fHilNameExt = "MHillasExt"; 
+    TString fHilNameSrc = "MHillasSrc"; 
+    TString fImgParName = "MNewImagePar"; 
+
+
+ if (OEEst)
+ { 
+   //===========================================================
+    //
+    // Optimization of energy estimator
+    //
+    gLog << "Macro ONAnalysis.C : calling CT1EEst" << endl;
+
+    TString inpath("");
+    TString outpath("");
+    Int_t howMany = 2000;
+    CT1EEst(inpath,   filenameOpt,   outpath, energyParName, 
+            fHilName, fHilNameSrc,   fhadronnessName,
+            howMany,  maxhadronness, maxalpha, maxdist,
+            binsE, binsTheta);
+    gLog << "Macro ONAnalysis.C : returning from CT1EEst" << endl;
+ }
+
+ if (WEX)
+ {
+    //-----------------------------------------------------------
+    //
+    // Read in parameters of energy estimator ("MMcEnergyEst")
+    //                   and migration matrix ("MHMcEnergyMigration")
+    //
+    gLog << "================================================================"
+         << endl;
+    gLog << "Macro ONAnalysis.C : read parameters of energy estimator and migration matrix from file '"
+         << energyParName << "'" << endl;
+    TFile enparam(energyParName);
+    enparam.ls();
+    MMcEnergyEst mcest("MMcEnergyEst"); 
+    mcest.Read("MMcEnergyEst");
+
+    //MMcEnergyEst &mcest = *((MMcEnergyEst*)gROOT->FindObject("MMcEnergyEst"));
+    gLog << "Parameters of energy estimator were read in" << endl;
+
+
+    gLog << "Read in Migration matrix" << endl;   
+
+    MHMcEnergyMigration mighiston("MHMcEnergyMigration");
+    mighiston.Read("MHMcEnergyMigration");
+    //MHMcEnergyMigration &mighiston = 
+    //      *((MHMcEnergyMigration*)gROOT->FindObject("MHMcEnergyMigration"));
+
+    gLog << "Migration matrix was read in" << endl;
+
+
+    TArrayD parA(mcest.GetNumCoeffA());
+    TArrayD parB(mcest.GetNumCoeffB());
+    for (Int_t i=0; i<parA.GetSize(); i++)
+      parA[i] = mcest.GetCoeff(i);
+    for (Int_t i=0; i<parB.GetSize(); i++)
+      parB[i] = mcest.GetCoeff( i+parA.GetSize() );
+
+    //*************************************************************************
+    //
+    // Analyse the data
+    //
+    gLog << "============================================================"
+         << endl;
+    gLog << "Analyse the data" << endl;
+
+    MTaskList tliston;
+    MParList pliston;
+
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+
+    //-------------------------------------------
+    // create the tasks which should be executed 
+    //
+
+    MReadMarsFile read("Events", filenameData);
+    read.DisableAutoScheme();
+
+    //.......................................................................
+
+      gLog << "Macro ONAnalysis.C : write root file '" << filenameDataout 
+           << "'" << endl;
+   
+      //MWriteRootFile &write = *(new MWriteRootFile(filenameDataout));
+
+
+      MWriteRootFile write(filenameDataout, "RECREATE");
+
+      write.AddContainer("MRawRunHeader", "RunHeaders");
+      write.AddContainer("MTime",         "Events");
+      write.AddContainer("MMcEvt",        "Events");
+      write.AddContainer("ThetaOrig",     "Events");
+      write.AddContainer("MSrcPosCam",    "Events");
+      write.AddContainer("MSigmabar",     "Events");
+      write.AddContainer("MHillas",       "Events");
+      write.AddContainer("MHillasExt",    "Events");
+      write.AddContainer("MHillasSrc",    "Events");
+      write.AddContainer("MNewImagePar",  "Events");
+
+      //write.AddContainer("HadNN",         "Events");
+      write.AddContainer("HadSC",         "Events");
+      write.AddContainer("HadRF",         "Events");
+
+      write.AddContainer("MEnergyEst",    "Events");
+
+
+    //-----------------------------------------------------------------
+    // geometry is needed in  MHHillas... classes 
+    MGeomCam *fGeom = 
+             (MGeomCam*)pliston->FindCreateObj("MGeomCamMagic", "MGeomCam");
+
+    MFSelFinal selfinalgh(fHilNameSrc);
+    selfinalgh.SetCuts(maxhadronness, 100.0, maxdist);
+    selfinalgh.SetHadronnessName(fhadronnessName);
+    selfinalgh.SetName("SelFinalgh");
+    MContinue contfinalgh(&selfinalgh);
+    contfinalgh.SetName("ContSelFinalgh");
+
+    //MFillH fillhadnn("hadNN[MHHadronness]", "HadNN");
+    //fillhadnn.SetName("HhadNN");
+    MFillH fillhadsc("hadSC[MHHadronness]", "HadSC");
+    fillhadsc.SetName("HhadSC");
+    MFillH fillhadrf("hadRF[MHHadronness]", "HadRF");
+    fillhadrf.SetName("HhadRF");
+
+    //---------------------------
+    // calculate estimated energy
+
+    MEnergyEstParam eeston(fHilName);
+    eeston.Add(fHilNameSrc);
+
+    eeston.SetCoeffA(parA);
+    eeston.SetCoeffB(parB);
+
+    //---------------------------
+    // calculate estimated energy using Daniel's parameters
+
+    //MEnergyEstParamDanielMkn421 eeston(fHilName);
+    //eeston.Add(fHilNameSrc);
+    //eeston.SetCoeffA(parA);
+    //eeston.SetCoeffB(parB);
+
+
+    //---------------------------
+
+
+    MFillH hfill1("MHHillas",    fHilName);
+    hfill1.SetName("HHillas");
+
+    MFillH hfill2("MHStarMap",   fHilName);
+    hfill2.SetName("HStarMap");
+
+    MFillH hfill3("MHHillasExt",   fHilNameSrc);
+    hfill3.SetName("HHillasExt");    
+
+    MFillH hfill4("MHHillasSrc",   fHilNameSrc);
+    hfill4.SetName("HHillasSrc");    
+
+    MFillH hfill5("MHNewImagePar", fImgParName);
+    hfill5.SetName("HNewImagePar");    
+
+    //---------------------------
+    // new from Robert
+
+    MFillH hfill6("MHTimeDiffTheta", "MMcEvt");
+    hfill6.SetName("HTimeDiffTheta");
+
+    MFillH hfill6a("MHTimeDiffTime", "MMcEvt");
+    hfill6a.SetName("HTimeDiffTime");
+
+    MFillH hfill7("MHAlphaEnergyTheta", fHilNameSrc);
+    hfill7.SetName("HAlphaEnergyTheta");
+
+    MFillH hfill7a("MHAlphaEnergyTime", fHilNameSrc);
+    hfill7a.SetName("HAlphaEnergyTime");
+
+    MFillH hfill7b("MHThetabarTime", fHilNameSrc);
+    hfill7b.SetName("HThetabarTime");
+
+    MFillH hfill7c("MHEnergyTime", "MMcEvt");
+    hfill7c.SetName("HEnergyTime");
+
+
+    //---------------------------
+
+    MFSelFinal selfinal(fHilNameSrc);
+    selfinal.SetCuts(maxhadronness, maxalpha, maxdist);
+    selfinal.SetHadronnessName(fhadronnessName);
+    selfinal.SetName("SelFinal");
+    MContinue contfinal(&selfinal);
+    contfinal.SetName("ContSelFinal");
+
+
+    //*****************************
+    // entries in MParList
+
+    pliston.AddToList(&tliston);
+    InitBinnings(&pliston);
+
+
+    //*****************************
+    // entries in MTaskList
+    
+    tliston.AddToList(&read);
+
+    // robert      
+    tliston.AddToList(&hfill6);   //timediff
+    tliston.AddToList(&hfill6a);   //timediff
+
+    tliston.AddToList(&contfinalgh);
+    tliston.AddToList(&eeston);
+
+    tliston.AddToList(&write);
+
+    //tliston.AddToList(&fillhadnn);
+    tliston.AddToList(&fillhadsc);
+    tliston.AddToList(&fillhadrf);
+
+    tliston.AddToList(&hfill1);
+    tliston.AddToList(&hfill2);
+    tliston.AddToList(&hfill3);
+    tliston.AddToList(&hfill4);
+    tliston.AddToList(&hfill5);
+
+    //robert
+    tliston.AddToList(&hfill7);
+    tliston.AddToList(&hfill7a);
+    tliston.AddToList(&hfill7b);
+    tliston.AddToList(&hfill7c);
+
+    tliston.AddToList(&contfinal);
+
+    //*****************************
+
+    //-------------------------------------------
+    // Execute event loop
+    //
+    MProgressBar bar;
+    MEvtLoop evtloop;
+    evtloop.SetParList(&pliston);
+    evtloop.SetProgressBar(&bar);
+
+    Int_t maxevents = -1;
+    if ( !evtloop.Eventloop(maxevents) )
+        return;
+
+    tliston.PrintStatistics(0, kTRUE);
+
+
+    //-------------------------------------------
+    // Display the histograms
+    //
+
+    //pliston.FindObject("hadNN", "MHHadronness")->DrawClone();
+
+    gLog << "before hadRF" << endl;
+    pliston.FindObject("hadRF", "MHHadronness")->DrawClone();
+
+    gLog << "before hadSC" << endl;
+    pliston.FindObject("hadSC", "MHHadronness")->DrawClone();
+
+    gLog << "before MHHillas" << endl;
+    pliston.FindObject("MHHillas")->DrawClone();
+
+    gLog << "before MHHillasExt" << endl;
+    pliston.FindObject("MHHillasExt")->DrawClone();
+
+    gLog << "before MHHillasSrc" << endl;
+    pliston.FindObject("MHHillasSrc")->DrawClone();
+
+    gLog << "before MHNewImagePar" << endl;
+    pliston.FindObject("MHNewImagePar")->DrawClone();
+
+    gLog << "before MHStarMap" << endl;
+    pliston.FindObject("MHStarMap")->DrawClone();
+
+    gLog << "before DeleteBinnings" << endl;
+
+    DeleteBinnings(&pliston);
+
+    gLog << "before Robert's code" << endl;
+
+
+//rwagner write all relevant histograms onto a file
+
+  if (WRobert)
+  {
+    gLog << "=======================================================" << endl;
+    gLog << "Write results onto file '" << filenameResults << "'" << endl;
+
+    TFile outfile(filenameResults,"recreate");
+
+    MHHillasSrc* hillasSrc = 
+      (MHHillasSrc*)(pliston->FindObject("MHHillasSrc"));
+        TH1F* alphaHist = (TH1F*)(hillasSrc->GetHistAlpha());
+    alphaHist->Write();
+    gLog << "Alpha plot has been written out" << endl;    
+
+
+    MHAlphaEnergyTheta* aetH = 
+      (MHAlphaEnergyTheta*)(pliston->FindObject("MHAlphaEnergyTheta"));
+    TH3D* aetHist = (TH3D*)(aetH->GetHist());
+    aetHist->SetName("aetHist");
+    aetHist->Write();
+    gLog << "AlphaEnergyTheta plot has been written out" << endl;    
+
+    MHAlphaEnergyTime* aetH2 = 
+      (MHAlphaEnergyTime*)(pliston->FindObject("MHAlphaEnergyTime"));
+    TH3D* aetHist2 = (TH3D*)(aetH2->GetHist());
+    aetHist2->SetName("aetimeHist");
+//     aetHist2->DrawClone();
+    aetHist2->Write();
+    gLog << "AlphaEnergyTime plot has been written out" << endl;    
+
+    MHThetabarTime* tbt = 
+      (MHThetabarTime*)(pliston->FindObject("MHThetabarTime"));
+    TProfile* tbtHist = (TProfile*)(tbt->GetHist());
+    tbtHist->SetName("tbtHist");
+    tbtHist->Write();
+    gLog << "ThetabarTime plot has been written out" << endl;    
+
+    MHEnergyTime* ent = 
+      (MHEnergyTime*)(pliston->FindObject("MHEnergyTime"));
+    TH2D* entHist = (TH2D*)(ent->GetHist());
+    entHist->SetName("entHist");
+    entHist->Write();
+    gLog << "EnergyTime plot has been written out" << endl;    
+    
+    MHTimeDiffTheta *time = (MHTimeDiffTheta*)pliston.FindObject("MHTimeDiffTheta");
+    TH2D* timeHist = (TH2D*)(time->GetHist());
+    timeHist->SetName("MHTimeDiffTheta");
+    timeHist->SetTitle("Time diffs");
+    timeHist->Write();
+    gLog << "TimeDiffTheta plot has been written out" << endl;    
+
+
+    MHTimeDiffTime *time2 = (MHTimeDiffTime*)pliston.FindObject("MHTimeDiffTime");
+    TH2D* timeHist2 = (TH2D*)(time2->GetHist());
+    timeHist2->SetName("MHTimeDiffTime");
+    timeHist2->SetTitle("Time diffs");
+    timeHist2->Write();
+    gLog << "TimeDiffTime plot has been written out" << endl;    
+
+//rwagner write also collareas to same file
+    collarea->GetHist()->Write();
+    collarea->GetHAll()->Write();
+    collarea->GetHSel()->Write();
+    gLog << "Effective collection areas have been written out" << endl;        
+
+//rwagner todo: write alpha_cut, type of g/h sep (RF, SC, NN), type of data
+//rwagner (ON/OFF/MC), MJDmin, MJDmax to this file
+
+    gLog << "before closing outfile" << endl;
+
+    //outfile.Close();
+    gLog << "Results were written onto file '" << filenameResults 
+         << "'" << endl;
+    gLog << "=======================================================" << endl;
+  }
+
+  }
+
+    gLog << "Macro ONAnalysis : End of Job E_XX" << endl;
+    gLog << "=======================================================" << endl;
+ }
+  //---------------------------------------------------------------------
+
+}
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
