Index: trunk/MagicSoft/Mars/mtemp/mwuerzburg/scripts/runmerpp
===================================================================
--- trunk/MagicSoft/Mars/mtemp/mwuerzburg/scripts/runmerpp	(revision 4083)
+++ trunk/MagicSoft/Mars/mtemp/mwuerzburg/scripts/runmerpp	(revision 4083)
@@ -0,0 +1,110 @@
+#!/bin/sh
+#
+# ========================================================================
+#
+# *
+# * This file is part of MARS, the MAGIC Analysis and Reconstruction
+# * Software. It is distributed to you in the hope that it can be a useful
+# * and timesaving tool in analysing Data of imaging Cerenkov telescopes.
+# * It is distributed WITHOUT ANY WARRANTY.
+# *
+# * Permission to use, copy, modify and distribute this software and its
+# * documentation for any purpose is hereby granted without fee,
+# * provided that the above copyright notice appear in all copies and
+# * that both that copyright notice and this permission notice appear
+# * in supporting documentation. It is provided "as is" without express
+# * or implied warranty.
+# *
+#
+#
+#   Author(s): Martin Merck  05/2004 <mailto:merck@astro.uni-wuerzburg.de>
+#
+#   Copyright: MAGIC Software Development, 2000-2004
+#
+#
+# ========================================================================
+
+#/////////////////////////////////////////////////////////////////////////////
+#
+# runmerpp
+#
+# This scripts is used to run merpp on a full Period of data. It will run merpp
+# on the raw-data file. Then it will update the root file by merpping in the CC
+# and CACO data.
+# As for some rawdata files no CaCo data files exist (due to DAQ restarting a run)
+# we need to use the previous CaCo file. This will add to much dc-current infos
+# to the merpped file, but will gaurantee that the right dc-currents are always
+# available.
+#
+# TODO:
+#  Due to problems with the DB the automatic DB update option is still disabled.
+#i
+# ------------------------------------
+# Which Period to use
+INDIR=/data/MAGIC/Period015
+# ------------------------------------
+#
+# For each day of this Period
+#
+DATES=`ls -d -1 $INDIR/rawdata2/20* | cut -d/ -f6 '-'`
+for DATE in $DATES
+do
+  OUTDIR=$INDIR/rootdata2/$DATE
+# Create Output Directory 
+  if [ ! -d $OUTDIR ]
+  then
+    echo $DATE
+    mkdir $OUTDIR
+  fi
+
+#
+# Loop over all raw files for this day
+#
+  RAWFILES=`ls -1 $INDIR/rawdata2/$DATE/*.raw`
+  LOGFILE=$OUTDIR/merpp.log
+  TIME=`date`
+  echo "-----------------------------------------------------------------" > $LOGFILE
+  echo " MERPP run started $TIME" >> $LOGFILE
+  echo "-----------------------------------------------------------------" >> $LOGFILE
+
+  PREVIOUS_CACO=
+  for i in $RAWFILES
+  do
+    TIMER=$SECONDS
+    IN_FILE=$i
+    RUN_NUM=`echo $i | cut -d_ -f4` 
+    CC_FILE=`ls -1 $INDIR/ccdata/$DATE/*$RUN_NUM*.rep`
+    CACO_FILE=`ls -1 $INDIR/cacodata/$DATE/*$RUN_NUM*.txt 2> /dev/null`
+    OUT_FILE=$OUTDIR/`echo $i | cut -d/ -s -f7 '-' | cut -d. -s -f1 '-'`.root
+#    merpp -a -f --sql=mysql://hercules:d99swMT\!@hercules $IN_FILE $OUT_FILE >> $LOGFILE
+
+#   MERPP the raw data file
+    merpp -a -f $IN_FILE $OUT_FILE >> $LOGFILE
+
+#   MERPP the CC report file
+    merpp -a -u $CC_FILE $OUT_FILE >> $LOGFILE
+
+#   If a CACO file exists for this run
+#   MERPP the CACO file.
+    if [ -n "$CACO_FILE" ]
+    then
+      merpp -a -u $CACO_FILE $OUT_FILE >> $LOGFILE
+      PERVIOUS_CACO=$CACOFILE
+    fi
+
+#   If no CACO file is available for this run
+#   we use the previous CACO file
+#   CACO only nows when CC starts a new run and creates 1 file for this run
+#   however the DAQ may create more subruns due to errors or limitaation on the 
+#   filesize. The relevant CACO information should be in the CACO file created
+#   when CC started this run (e.g. the previous CACO file)
+    if [ -z "$CACO_FILE" ]
+    then
+      if [ -n "$PREVIOUS_CACO" ]
+      then
+        merpp -a -u $PREVIOUS_CACO $OUT_FILE >> $LOGFILE
+      fi
+    fi  
+    echo "Processed file $IN_FILE in $(( $SECONDS - $TIMER)) secs."
+  done
+done