Ignore:
Timestamp:
09/16/08 11:20:26 (16 years ago)
Author:
snruegam
Message:
*** empty log message ***
File:
1 edited

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  • trunk/MagicSoft/Mars/datacenter/scripts/runstar

    r9086 r9136  
    7575
    7676echo "staging files..." >> $scriptlog 2>&1
    77 ssh -nx phoenix /opt/SUNWsamfs/bin/stage -V $inpath/20*_0*${run}_Y_*_E.root >> $scriptlog 2>&1
     77ssh -nx phoenix /opt/SUNWsamfs/bin/stage -V $inpath/20[01][0-9]*_0*${run}_Y_*.root >> $scriptlog 2>&1
    7878
    79 echo "./star -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --ind=$inpath --out=$outpath $sequfile 2>> $scriptlog> /dev/null" >> $scriptlog 2>&1
    80 ./star -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --ind=$inpath --out=$outpath $sequfile 2>> $scriptlog> /dev/null
     79
     80# define star.rc files
     81starrcnew=$setuppath/$program/star.rc
     82starrcmux=$setuppath/$program/star_mux.rc
     83# link star.rc file
     84echo "linking the star.rc file to $outpath" >> $scriptlog 2>&1
     85if [ $sequence -gt 200000 ]
     86then
     87   ln -vsf $starrcmux $outpath/star.rc >> $scriptlog 2>&1
     88else
     89   ln -vsf $starrcnew $outpath/star.rc >> $scriptlog 2>&1
     90fi
     91starrcseq=$outpath/star.rc
     92
     93echo "./star -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --ind=$inpath --out=$outpath $sequfile --config=$starrcseq 2>> $scriptlog> /dev/null" >> $scriptlog 2>&1
     94./star -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --ind=$inpath --out=$outpath $sequfile --config=$starrcseq 2>> $scriptlog> /dev/null
    8195check1=$?
    8296
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