Changeset 7467 for trunk/MagicSoft/Mars/datacenter/scripts/runstar

Timestamp:

01/31/06 14:53:08 (19 years ago)

Author:

Daniela Dorner

Message:

*** empty log message ***

File:

• trunk/MagicSoft/Mars/datacenter/scripts/runstar (modified) (1 diff)

trunk/MagicSoft/Mars/datacenter/scripts/runstar

@@ -152 +152 @@
   
   echo "run $program..." >> $scriptlog 2>&1
+  setstatus "start"
+
   ./star -b -q -v4 -f --log=$outpath/$program$no2.log --html=$outpath/$program$no2.html --ind=$inpath --out=$outpath $sequfile  2>> $scriptlog> /dev/null
   check1=$?
 
   case $check1 in
-     0)   echo "check1=$check1 -> everything ok " >> $scriptlog 2>&1
-          echo "inserting the status for $program for sequence $sequence into the db" >> $scriptlog 2>&1
-          statustime="Now()"
-          failed="NULL"
-          starttime="NULL"
-          failedtime="NULL"
-          var1=$no
-          var2=$no2
-          setstatus
-          ;;
-     *)   echo "check1=$check1 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1;;
+     0)   echo "check1=$check1 -> everything ok " >> $scriptlog 2>&1;;
+     *)   echo "check1=$check1 -> ERROR -> step has to be repeated" >> $scriptlog 2>&1
+          com="star failed"
+          check=$check1
+          ;;
   esac
+  echo "inserting the status for $program for sequence $sequence into the db" >> $scriptlog 2>&1
+  setstatus "stop"
 done