Changeset 7477 for trunk/MagicSoft/Mars/datacenter/scripts/writesequencefiles

Timestamp:

02/03/06 16:49:10 (19 years ago)

Author:

Daniela Dorner

Message:

*** empty log message ***

File:

• trunk/MagicSoft/Mars/datacenter/scripts/writesequencefiles (modified) (6 diffs)

trunk/MagicSoft/Mars/datacenter/scripts/writesequencefiles ¶

@@ -44 +44 @@
 table=SequenceProcessStatus
 column=fSequenceFileWritten
-date=NULL
-datetime=`date +%F-%H-%M-%S`
-year=`date +%Y`
 
 todofile=$listpath/ToDo-$table-$column.txt
-getstatuslogpath=$logpath/getstatus/$program/$year
-getstatuslog=$getstatuslogpath/getstatus-$program-$datetime.log
+lockfile=$lockpath/lock-$program.txt
 
 scriptlogpath=$logpath/run/$program/`date +%Y/%m/%d`
@@ -58 +54 @@
 date >> $scriptlog 2>&1
 
-makedir $getstatuslogpath >> $scriptlog 2>&1
-
 cd $mars
 
 # check if script is already running
-date > $lockpath/lock-$table-$column.txt >> $scriptlog 2>&1
+date > $lockfile >> $scriptlog 2>&1
 checklock0=$?
 case $checklock0 in 
@@ -75 +69 @@
 
 # get todo list
-echo "getting list..." >> $scriptlog 2>&1
-check0=`root -q -b $macrospath/getdolist.C+\("\"$table\""\,"\"$column\""\,"\"$date\""\,"\"$listpath\""\) | tee $getstatuslog | grep int | sed -e 's/(int)//'`
-
-case $check0 in 
-    1)   echo "check0=$check0 -> everything ok -> run $program" >> $scriptlog 2>&1;;
-    *)   echo "check0=$check0 -> ERROR -> could not get todo list -> exit" >> $scriptlog 2>&1
-         rm -v $todofile >> $scriptlog 2>&1
-         rm -v $lockpath/lock-$table-$column.txt >> $scriptlog 2>&1
-         date  >> $scriptlog 2>&1
-         exit;;
-esac
+getdolist  >> $scriptlog 2>&1
 
 # get sequences from todo file
@@ -92 +76 @@
 then 
    echo "nothing to do -> exit"  >> $scriptlog 2>&1
-   rm -v $todofile >> $scriptlog 2>&1
-   rm -v $lockpath/lock-$table-$column.txt >> $scriptlog 2>&1
-   date  >> $scriptlog 2>&1
-   exit
+   finish >> $scriptlog 2>&1
 fi
 
@@ -110 +91 @@
 
    writesequencefilelogpath=$logpath/$program/$no
-   echo "$programlogpath: "$writesequencefilelogpath >> $scriptlog 2>&1
    makedir $writesequencefilelogpath >> $scriptlog 2>&1
+   writesequencefilelog=$writesequencefilelogpath/writesequencefile-$no2.log
 
    echo "write sequencefile for sequence $sequence" >> $scriptlog 2>&1
    setstatus "start" >> $scriptlog 2>&1
 
-   check2=`root -q -b $macrospath/writesequencefile.C+\($sequence\,"\"$sequpath\""\) | tee $writesequencefilelogpath/writesequencefile-$no2.log | grep int | sed -e 's/(int)//'`
+   check2=`root -q -b $macrospath/writesequencefile.C+\($sequence\,"\"$sequpath\""\) | tee $writesequencefilelog | grep int | sed -e 's/(int)//'`
    case $check2 in
       1)   echo "check2=$check2 -> everything ok " >> $scriptlog 2>&1 ;;
@@ -128 +109 @@
 done
 
-rm -v $todofile >> $scriptlog 2>&1
-rm -v $lockpath/lock-$table-$column.txt >> $scriptlog 2>&1
+finish >> $scriptlog 2>&1
 
-set +C
-
-date  >> $scriptlog 2>&1
-